7-93067514-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93067514
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 93067514
    reference: chr 7
allele count: 1
allele frequency: 8.255456856982466e-6
allele num: 121132
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000399552
  ensembl transcript: ENST00000421592
  gene symbol: CALCR
  hgvsc: ENST00000421592.1:c.911+8T>C
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000413179
  ensembl transcript: ENST00000415529
  gene symbol: CALCR
  hgvsc: ENST00000415529.1:c.*88+8T>C
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000353385
  ensembl transcript: ENST00000360249
  gene symbol: CALCR
  hgvsc: ENST00000360249.4:c.911+8T>C
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000389295
  ensembl transcript: ENST00000426151
  gene symbol: CALCR
  hgvsc: ENST00000426151.1:c.863+8T>C
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000391369
  ensembl transcript: ENST00000423724
  gene symbol: CALCR
  hgvsc: ENST00000423724.1:c.*88+8T>C
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000377959
  ensembl transcript: ENST00000394441
  gene symbol: CALCR
  hgvsc: ENST00000394441.1:c.863+8T>C
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000352561
  ensembl transcript: ENST00000359558
  gene symbol: CALCR
  hgvsc: ENST00000359558.2:c.965+8T>C
  variant of: http://identifiers.org/hgnc/1440
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8251
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1183
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22955
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3597
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1975
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18205
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7689
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32963
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2731
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.75e1
  variant carriers: 0
hgvs: c.965+8T>C
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ

7-93067517-CT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93067517
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 93067516
    reference: chr 7
allele count: 2
allele frequency: 1.650873311982039e-5
allele num: 121148
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000399552
  ensembl transcript: ENST00000421592
  gene symbol: CALCR
  hgvsc: ENST00000421592.1:c.911+4delA
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000413179
  ensembl transcript: ENST00000415529
  gene symbol: CALCR
  hgvsc: ENST00000415529.1:c.*88+4delA
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000352561
  ensembl transcript: ENST00000359558
  gene symbol: CALCR
  hgvsc: ENST00000359558.2:c.965+4delA
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000377959
  ensembl transcript: ENST00000394441
  gene symbol: CALCR
  hgvsc: ENST00000394441.1:c.863+4delA
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000353385
  ensembl transcript: ENST00000360249
  gene symbol: CALCR
  hgvsc: ENST00000360249.4:c.911+4delA
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000389295
  ensembl transcript: ENST00000426151
  gene symbol: CALCR
  hgvsc: ENST00000426151.1:c.863+4delA
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000391369
  ensembl transcript: ENST00000423724
  gene symbol: CALCR
  hgvsc: ENST00000423724.1:c.*88+4delA
  variant of: http://identifiers.org/hgnc/1440
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1975
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3597
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18221
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8257
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22955
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1183
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7692
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1106
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1578
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 4.25e1
  variant carriers: 0
hgvs: c.965+4delA
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
reference allele: CT
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum

7-93067521-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93067521
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 93067521
    reference: chr 7
allele count: 1
allele frequency: 8.253957772752034e-6
allele num: 121154
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000391369
  ensembl transcript: ENST00000423724
  gene symbol: CALCR
  hgvsc: ENST00000423724.1:c.*88+1G>A
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000413179
  ensembl transcript: ENST00000415529
  gene symbol: CALCR
  hgvsc: ENST00000415529.1:c.*88+1G>A
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000389295
  ensembl transcript: ENST00000426151
  gene symbol: CALCR
  hgvsc: ENST00000426151.1:c.863+1G>A
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000353385
  ensembl transcript: ENST00000360249
  gene symbol: CALCR
  hgvsc: ENST00000360249.4:c.911+1G>A
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000377959
  ensembl transcript: ENST00000394441
  gene symbol: CALCR
  hgvsc: ENST00000394441.1:c.863+1G>A
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000399552
  ensembl transcript: ENST00000421592
  gene symbol: CALCR
  hgvsc: ENST00000421592.1:c.911+1G>A
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000352561
  ensembl transcript: ENST00000359558
  gene symbol: CALCR
  hgvsc: ENST00000359558.2:c.965+1G>A
  variant of: http://identifiers.org/hgnc/1440
canonical: true
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22954
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1975
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8258
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3598
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1183
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18250
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2584
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1106
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.25e1
  variant carriers: 0
hgvs: c.965+1G>A
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: DP

7-93067528-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93067528
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 93067528
    reference: chr 7
allele count: 2
allele frequency: 1.650410126916539e-5
allele num: 121182
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000352561
  ensembl transcript: ENST00000359558
  gene symbol: CALCR
  hgvsc: ENST00000359558.2:c.959A>G
  hgvsp: ENSP00000352561.2:p.Asn320Ser
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000377959
  ensembl transcript: ENST00000394441
  gene symbol: CALCR
  hgvsc: ENST00000394441.1:c.857A>G
  hgvsp: ENSP00000377959.1:p.Asn286Ser
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000353385
  ensembl transcript: ENST00000360249
  gene symbol: CALCR
  hgvsc: ENST00000360249.4:c.905A>G
  hgvsp: ENSP00000353385.4:p.Asn302Ser
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000399552
  ensembl transcript: ENST00000421592
  gene symbol: CALCR
  hgvsc: ENST00000421592.1:c.905A>G
  hgvsp: ENSP00000399552.1:p.Asn302Ser
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000391369
  ensembl transcript: ENST00000423724
  gene symbol: CALCR
  hgvsc: ENST00000423724.1:c.*82A>G
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000389295
  ensembl transcript: ENST00000426151
  gene symbol: CALCR
  hgvsc: ENST00000426151.1:c.857A>G
  hgvsp: ENSP00000389295.1:p.Asn286Ser
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000413179
  ensembl transcript: ENST00000415529
  gene symbol: CALCR
  hgvsc: ENST00000415529.1:c.*82A>G
  variant of: http://identifiers.org/hgnc/1440
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18285
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1976
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3594
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22944
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8267
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1183
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7711
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2733
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Asn320Ser
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
reference allele: T
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS

7-93067538-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93067538
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 93067538
    reference: chr 7
allele count: 5
allele frequency: 4.125821038386639e-5
allele num: 121188
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000399552
  ensembl transcript: ENST00000421592
  gene symbol: CALCR
  hgvsc: ENST00000421592.1:c.895G>A
  hgvsp: ENSP00000399552.1:p.Val299Met
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000391369
  ensembl transcript: ENST00000423724
  gene symbol: CALCR
  hgvsc: ENST00000423724.1:c.*72G>A
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000413179
  ensembl transcript: ENST00000415529
  gene symbol: CALCR
  hgvsc: ENST00000415529.1:c.*72G>A
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000352561
  ensembl transcript: ENST00000359558
  gene symbol: CALCR
  hgvsc: ENST00000359558.2:c.949G>A
  hgvsp: ENSP00000352561.2:p.Val317Met
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000353385
  ensembl transcript: ENST00000360249
  gene symbol: CALCR
  hgvsc: ENST00000360249.4:c.895G>A
  hgvsp: ENSP00000353385.4:p.Val299Met
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000377959
  ensembl transcript: ENST00000394441
  gene symbol: CALCR
  hgvsc: ENST00000394441.1:c.847G>A
  hgvsp: ENSP00000377959.1:p.Val283Met
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000389295
  ensembl transcript: ENST00000426151
  gene symbol: CALCR
  hgvsc: ENST00000426151.1:c.847G>A
  hgvsp: ENSP00000389295.1:p.Val283Met
  variant of: http://identifiers.org/hgnc/1440
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1980
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8280
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1186
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22884
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3600
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18323
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1107
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7705
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2727
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Val317Met
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD

7-93067539-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93067539
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 93067539
    reference: chr 7
allele count: 2
allele frequency: 1.650410126916539e-5
allele num: 121182
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000377959
  ensembl transcript: ENST00000394441
  gene symbol: CALCR
  hgvsc: ENST00000394441.1:c.846C>T
  hgvsp: ENST00000394441.1:c.846C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000389295
  ensembl transcript: ENST00000426151
  gene symbol: CALCR
  hgvsc: ENST00000426151.1:c.846C>T
  hgvsp: ENST00000426151.1:c.846C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000391369
  ensembl transcript: ENST00000423724
  gene symbol: CALCR
  hgvsc: ENST00000423724.1:c.*71C>T
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000353385
  ensembl transcript: ENST00000360249
  gene symbol: CALCR
  hgvsc: ENST00000360249.4:c.894C>T
  hgvsp: ENST00000360249.4:c.894C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000399552
  ensembl transcript: ENST00000421592
  gene symbol: CALCR
  hgvsc: ENST00000421592.1:c.894C>T
  hgvsp: ENST00000421592.1:c.894C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000352561
  ensembl transcript: ENST00000359558
  gene symbol: CALCR
  hgvsc: ENST00000359558.2:c.948C>T
  hgvsp: ENST00000359558.2:c.948C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000413179
  ensembl transcript: ENST00000415529
  gene symbol: CALCR
  hgvsc: ENST00000415529.1:c.*71C>T
  variant of: http://identifiers.org/hgnc/1440
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1975
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3597
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8281
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1183
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22883
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18339
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2580
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1107
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7711
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ala316Ala
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
reference allele: G
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff

7-93067545-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93067545
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 93067545
    reference: chr 7
allele count: 1
allele frequency: 8.252459232851389e-6
allele num: 121176
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000352561
  ensembl transcript: ENST00000359558
  gene symbol: CALCR
  hgvsc: ENST00000359558.2:c.942C>T
  hgvsp: ENST00000359558.2:c.942C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000413179
  ensembl transcript: ENST00000415529
  gene symbol: CALCR
  hgvsc: ENST00000415529.1:c.*65C>T
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000377959
  ensembl transcript: ENST00000394441
  gene symbol: CALCR
  hgvsc: ENST00000394441.1:c.840C>T
  hgvsp: ENST00000394441.1:c.840C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000391369
  ensembl transcript: ENST00000423724
  gene symbol: CALCR
  hgvsc: ENST00000423724.1:c.*65C>T
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000389295
  ensembl transcript: ENST00000426151
  gene symbol: CALCR
  hgvsc: ENST00000426151.1:c.840C>T
  hgvsp: ENST00000426151.1:c.840C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000399552
  ensembl transcript: ENST00000421592
  gene symbol: CALCR
  hgvsc: ENST00000421592.1:c.888C>T
  hgvsp: ENST00000421592.1:c.888C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000353385
  ensembl transcript: ENST00000360249
  gene symbol: CALCR
  hgvsc: ENST00000360249.4:c.888C>T
  hgvsp: ENST00000360249.4:c.888C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1440
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1183
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1977
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3599
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18362
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22848
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8287
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1578
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3597
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Thr314Thr
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: QD

7-93067545-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93067545
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 93067545
    reference: chr 7
allele count: 1
allele frequency: 8.252459232851389e-6
allele num: 121176
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000389295
  ensembl transcript: ENST00000426151
  gene symbol: CALCR
  hgvsc: ENST00000426151.1:c.840C>G
  hgvsp: ENST00000426151.1:c.840C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000353385
  ensembl transcript: ENST00000360249
  gene symbol: CALCR
  hgvsc: ENST00000360249.4:c.888C>G
  hgvsp: ENST00000360249.4:c.888C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000413179
  ensembl transcript: ENST00000415529
  gene symbol: CALCR
  hgvsc: ENST00000415529.1:c.*65C>G
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000377959
  ensembl transcript: ENST00000394441
  gene symbol: CALCR
  hgvsc: ENST00000394441.1:c.840C>G
  hgvsp: ENST00000394441.1:c.840C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000352561
  ensembl transcript: ENST00000359558
  gene symbol: CALCR
  hgvsc: ENST00000359558.2:c.942C>G
  hgvsp: ENST00000359558.2:c.942C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000391369
  ensembl transcript: ENST00000423724
  gene symbol: CALCR
  hgvsc: ENST00000423724.1:c.*65C>G
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000399552
  ensembl transcript: ENST00000421592
  gene symbol: CALCR
  hgvsc: ENST00000421592.1:c.888C>G
  hgvsp: ENST00000421592.1:c.888C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/1440
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3599
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1977
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18362
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8287
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1183
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22848
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2580
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1109
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1578
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33027
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Thr314Thr
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
reference allele: G
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum

7-93067552-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93067552
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 93067552
    reference: chr 7
allele count: 1
allele frequency: 8.253140319891718e-6
allele num: 121166
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000353385
  ensembl transcript: ENST00000360249
  gene symbol: CALCR
  hgvsc: ENST00000360249.4:c.881C>G
  hgvsp: ENSP00000353385.4:p.Ala294Gly
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000377959
  ensembl transcript: ENST00000394441
  gene symbol: CALCR
  hgvsc: ENST00000394441.1:c.833C>G
  hgvsp: ENSP00000377959.1:p.Ala278Gly
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000352561
  ensembl transcript: ENST00000359558
  gene symbol: CALCR
  hgvsc: ENST00000359558.2:c.935C>G
  hgvsp: ENSP00000352561.2:p.Ala312Gly
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000413179
  ensembl transcript: ENST00000415529
  gene symbol: CALCR
  hgvsc: ENST00000415529.1:c.*58C>G
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000391369
  ensembl transcript: ENST00000423724
  gene symbol: CALCR
  hgvsc: ENST00000423724.1:c.*58C>G
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000389295
  ensembl transcript: ENST00000426151
  gene symbol: CALCR
  hgvsc: ENST00000426151.1:c.833C>G
  hgvsp: ENSP00000389295.1:p.Ala278Gly
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000399552
  ensembl transcript: ENST00000421592
  gene symbol: CALCR
  hgvsc: ENST00000421592.1:c.881C>G
  hgvsp: ENSP00000399552.1:p.Ala294Gly
  variant of: http://identifiers.org/hgnc/1440
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8287
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18377
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22804
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3596
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1976
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1181
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33018
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3600
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2728
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ala312Gly
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ

7-93067554-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93067554
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 93067554
    reference: chr 7
allele count: 2
allele frequency: 1.650764303872693e-5
allele num: 121156
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000399552
  ensembl transcript: ENST00000421592
  gene symbol: CALCR
  hgvsc: ENST00000421592.1:c.879T>C
  hgvsp: ENST00000421592.1:c.879T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000353385
  ensembl transcript: ENST00000360249
  gene symbol: CALCR
  hgvsc: ENST00000360249.4:c.879T>C
  hgvsp: ENST00000360249.4:c.879T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000391369
  ensembl transcript: ENST00000423724
  gene symbol: CALCR
  hgvsc: ENST00000423724.1:c.*56T>C
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000377959
  ensembl transcript: ENST00000394441
  gene symbol: CALCR
  hgvsc: ENST00000394441.1:c.831T>C
  hgvsp: ENST00000394441.1:c.831T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000352561
  ensembl transcript: ENST00000359558
  gene symbol: CALCR
  hgvsc: ENST00000359558.2:c.933T>C
  hgvsp: ENST00000359558.2:c.933T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000413179
  ensembl transcript: ENST00000415529
  gene symbol: CALCR
  hgvsc: ENST00000415529.1:c.*56T>C
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000389295
  ensembl transcript: ENST00000426151
  gene symbol: CALCR
  hgvsc: ENST00000426151.1:c.831T>C
  hgvsp: ENST00000426151.1:c.831T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1440
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3594
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1180
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22783
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8283
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18380
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1976
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8017
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7727
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2727
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 2.25e1
  variant carriers: 0
hgvs: p.His311His
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP

7-93067555-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93067555
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 93067555
    reference: chr 7
allele count: 1
allele frequency: 8.254502831294471e-6
allele num: 121146
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000413179
  ensembl transcript: ENST00000415529
  gene symbol: CALCR
  hgvsc: ENST00000415529.1:c.*55A>G
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000391369
  ensembl transcript: ENST00000423724
  gene symbol: CALCR
  hgvsc: ENST00000423724.1:c.*55A>G
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000352561
  ensembl transcript: ENST00000359558
  gene symbol: CALCR
  hgvsc: ENST00000359558.2:c.932A>G
  hgvsp: ENSP00000352561.2:p.His311Arg
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000377959
  ensembl transcript: ENST00000394441
  gene symbol: CALCR
  hgvsc: ENST00000394441.1:c.830A>G
  hgvsp: ENSP00000377959.1:p.His277Arg
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000389295
  ensembl transcript: ENST00000426151
  gene symbol: CALCR
  hgvsc: ENST00000426151.1:c.830A>G
  hgvsp: ENSP00000389295.1:p.His277Arg
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000353385
  ensembl transcript: ENST00000360249
  gene symbol: CALCR
  hgvsc: ENST00000360249.4:c.878A>G
  hgvsp: ENSP00000353385.4:p.His293Arg
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000399552
  ensembl transcript: ENST00000421592
  gene symbol: CALCR
  hgvsc: ENST00000421592.1:c.878A>G
  hgvsp: ENSP00000399552.1:p.His293Arg
  variant of: http://identifiers.org/hgnc/1440
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8281
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22773
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1975
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3595
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1180
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18374
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8017
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32955
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 3.25e1
  variant carriers: 0
hgvs: p.His311Arg
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: T
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: DP

7-93067559-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93067559
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 93067559
    reference: chr 7
allele count: 1
allele frequency: 8.255729476256522e-6
allele num: 121128
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000413179
  ensembl transcript: ENST00000415529
  gene symbol: CALCR
  hgvsc: ENST00000415529.1:c.*51A>T
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000352561
  ensembl transcript: ENST00000359558
  gene symbol: CALCR
  hgvsc: ENST00000359558.2:c.928A>T
  hgvsp: ENSP00000352561.2:p.Ile310Phe
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000377959
  ensembl transcript: ENST00000394441
  gene symbol: CALCR
  hgvsc: ENST00000394441.1:c.826A>T
  hgvsp: ENSP00000377959.1:p.Ile276Phe
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000399552
  ensembl transcript: ENST00000421592
  gene symbol: CALCR
  hgvsc: ENST00000421592.1:c.874A>T
  hgvsp: ENSP00000399552.1:p.Ile292Phe
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000389295
  ensembl transcript: ENST00000426151
  gene symbol: CALCR
  hgvsc: ENST00000426151.1:c.826A>T
  hgvsp: ENSP00000389295.1:p.Ile276Phe
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000391369
  ensembl transcript: ENST00000423724
  gene symbol: CALCR
  hgvsc: ENST00000423724.1:c.*51A>T
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000353385
  ensembl transcript: ENST00000360249
  gene symbol: CALCR
  hgvsc: ENST00000360249.4:c.874A>T
  hgvsp: ENSP00000353385.4:p.Ile292Phe
  variant of: http://identifiers.org/hgnc/1440
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1180
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8278
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18380
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22729
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3597
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1975
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3595
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7722
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8017
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Ile310Phe
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
reference allele: T
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum

7-93067560-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93067560
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 93067560
    reference: chr 7
allele count: 1
allele frequency: 8.256274768824306e-6
allele num: 121120
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000391369
  ensembl transcript: ENST00000423724
  gene symbol: CALCR
  hgvsc: ENST00000423724.1:c.*50T>C
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000399552
  ensembl transcript: ENST00000421592
  gene symbol: CALCR
  hgvsc: ENST00000421592.1:c.873T>C
  hgvsp: ENST00000421592.1:c.873T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000352561
  ensembl transcript: ENST00000359558
  gene symbol: CALCR
  hgvsc: ENST00000359558.2:c.927T>C
  hgvsp: ENST00000359558.2:c.927T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000353385
  ensembl transcript: ENST00000360249
  gene symbol: CALCR
  hgvsc: ENST00000360249.4:c.873T>C
  hgvsp: ENST00000360249.4:c.873T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000377959
  ensembl transcript: ENST00000394441
  gene symbol: CALCR
  hgvsc: ENST00000394441.1:c.825T>C
  hgvsp: ENST00000394441.1:c.825T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000389295
  ensembl transcript: ENST00000426151
  gene symbol: CALCR
  hgvsc: ENST00000426151.1:c.825T>C
  hgvsp: ENST00000426151.1:c.825T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000413179
  ensembl transcript: ENST00000415529
  gene symbol: CALCR
  hgvsc: ENST00000415529.1:c.*50T>C
  variant of: http://identifiers.org/hgnc/1440
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1975
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22709
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1180
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18373
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8281
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3595
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8017
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2728
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1577
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Thr309Thr
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
population: Latino
reference allele: A
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP

7-93067564-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93067564
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 93067564
    reference: chr 7
allele count: 1
allele frequency: 8.257911078813503e-6
allele num: 121096
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000352561
  ensembl transcript: ENST00000359558
  gene symbol: CALCR
  hgvsc: ENST00000359558.2:c.923C>A
  hgvsp: ENSP00000352561.2:p.Thr308Asn
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000353385
  ensembl transcript: ENST00000360249
  gene symbol: CALCR
  hgvsc: ENST00000360249.4:c.869C>A
  hgvsp: ENSP00000353385.4:p.Thr290Asn
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000377959
  ensembl transcript: ENST00000394441
  gene symbol: CALCR
  hgvsc: ENST00000394441.1:c.821C>A
  hgvsp: ENSP00000377959.1:p.Thr274Asn
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000399552
  ensembl transcript: ENST00000421592
  gene symbol: CALCR
  hgvsc: ENST00000421592.1:c.869C>A
  hgvsp: ENSP00000399552.1:p.Thr290Asn
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000389295
  ensembl transcript: ENST00000426151
  gene symbol: CALCR
  hgvsc: ENST00000426151.1:c.821C>A
  hgvsp: ENSP00000389295.1:p.Thr274Asn
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000413179
  ensembl transcript: ENST00000415529
  gene symbol: CALCR
  hgvsc: ENST00000415529.1:c.*46C>A
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000391369
  ensembl transcript: ENST00000423724
  gene symbol: CALCR
  hgvsc: ENST00000423724.1:c.*46C>A
  variant of: http://identifiers.org/hgnc/1440
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3597
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22628
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1181
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18374
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1976
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8281
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8016
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32802
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2726
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1105
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Thr308Asn
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ

7-93067572-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93067572
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 93067572
    reference: chr 7
allele count: 1
allele frequency: 8.268973158913126e-6
allele num: 120934
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000391369
  ensembl transcript: ENST00000423724
  gene symbol: CALCR
  hgvsc: ENST00000423724.1:c.*38G>C
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000377959
  ensembl transcript: ENST00000394441
  gene symbol: CALCR
  hgvsc: ENST00000394441.1:c.813G>C
  hgvsp: ENST00000394441.1:c.813G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000353385
  ensembl transcript: ENST00000360249
  gene symbol: CALCR
  hgvsc: ENST00000360249.4:c.861G>C
  hgvsp: ENST00000360249.4:c.861G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000413179
  ensembl transcript: ENST00000415529
  gene symbol: CALCR
  hgvsc: ENST00000415529.1:c.*38G>C
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000352561
  ensembl transcript: ENST00000359558
  gene symbol: CALCR
  hgvsc: ENST00000359558.2:c.915G>C
  hgvsp: ENST00000359558.2:c.915G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000399552
  ensembl transcript: ENST00000421592
  gene symbol: CALCR
  hgvsc: ENST00000421592.1:c.861G>C
  hgvsp: ENST00000421592.1:c.861G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000389295
  ensembl transcript: ENST00000426151
  gene symbol: CALCR
  hgvsc: ENST00000426151.1:c.813G>C
  hgvsp: ENST00000426151.1:c.813G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/1440
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18328
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22405
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3596
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8259
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1186
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1978
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3572
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8012
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1099
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1572
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Leu305Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
population: Other
population: Latino
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: MQ

7-93067575-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93067575
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 93067575
    reference: chr 7
allele count: 6
allele frequency: 4.962450789029675e-5
allele num: 120908
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000377959
  ensembl transcript: ENST00000394441
  gene symbol: CALCR
  hgvsc: ENST00000394441.1:c.810G>A
  hgvsp: ENST00000394441.1:c.810G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000399552
  ensembl transcript: ENST00000421592
  gene symbol: CALCR
  hgvsc: ENST00000421592.1:c.858G>A
  hgvsp: ENST00000421592.1:c.858G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000389295
  ensembl transcript: ENST00000426151
  gene symbol: CALCR
  hgvsc: ENST00000426151.1:c.810G>A
  hgvsp: ENST00000426151.1:c.810G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000352561
  ensembl transcript: ENST00000359558
  gene symbol: CALCR
  hgvsc: ENST00000359558.2:c.912G>A
  hgvsp: ENST00000359558.2:c.912G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000391369
  ensembl transcript: ENST00000423724
  gene symbol: CALCR
  hgvsc: ENST00000423724.1:c.*35G>A
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000413179
  ensembl transcript: ENST00000415529
  gene symbol: CALCR
  hgvsc: ENST00000415529.1:c.*35G>A
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000353385
  ensembl transcript: ENST00000360249
  gene symbol: CALCR
  hgvsc: ENST00000360249.4:c.858G>A
  hgvsp: ENST00000360249.4:c.858G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/1440
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1188
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1980
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3593
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18297
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 855
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8268
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22337
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7623
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2573
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 445
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2703
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Pro304Pro
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: DP

7-93067576-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93067576
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 93067576
    reference: chr 7
allele count: 1
allele frequency: 8.274036074797286e-6
allele num: 120860
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000353385
  ensembl transcript: ENST00000360249
  gene symbol: CALCR
  hgvsc: ENST00000360249.4:c.857C>T
  hgvsp: ENSP00000353385.4:p.Pro286Leu
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000389295
  ensembl transcript: ENST00000426151
  gene symbol: CALCR
  hgvsc: ENST00000426151.1:c.809C>T
  hgvsp: ENSP00000389295.1:p.Pro270Leu
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000391369
  ensembl transcript: ENST00000423724
  gene symbol: CALCR
  hgvsc: ENST00000423724.1:c.*34C>T
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000377959
  ensembl transcript: ENST00000394441
  gene symbol: CALCR
  hgvsc: ENST00000394441.1:c.809C>T
  hgvsp: ENSP00000377959.1:p.Pro270Leu
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000352561
  ensembl transcript: ENST00000359558
  gene symbol: CALCR
  hgvsc: ENST00000359558.2:c.911C>T
  hgvsp: ENSP00000352561.2:p.Pro304Leu
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000399552
  ensembl transcript: ENST00000421592
  gene symbol: CALCR
  hgvsc: ENST00000421592.1:c.857C>T
  hgvsp: ENSP00000399552.1:p.Pro286Leu
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000413179
  ensembl transcript: ENST00000415529
  gene symbol: CALCR
  hgvsc: ENST00000415529.1:c.*34C>T
  variant of: http://identifiers.org/hgnc/1440
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1990
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8270
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3612
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18279
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22269
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1191
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2699
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2574
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 479
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1569
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Pro304Leu
num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD

http://identifiers.org/exac.variant/7-93067582-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93067582
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 93067582
    reference: chr 7
allele count: 2
allele frequency: 1.656287266463495e-5
allele num: 120752
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000399552
  ensembl transcript: ENST00000421592
  gene symbol: CALCR
  hgvsc: ENST00000421592.1:c.851G>T
  hgvsp: ENSP00000399552.1:p.Gly284Val
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000352561
  ensembl transcript: ENST00000359558
  gene symbol: CALCR
  hgvsc: ENST00000359558.2:c.905G>T
  hgvsp: ENSP00000352561.2:p.Gly302Val
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000413179
  ensembl transcript: ENST00000415529
  gene symbol: CALCR
  hgvsc: ENST00000415529.1:c.*28G>T
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000391369
  ensembl transcript: ENST00000423724
  gene symbol: CALCR
  hgvsc: ENST00000423724.1:c.*28G>T
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000353385
  ensembl transcript: ENST00000360249
  gene symbol: CALCR
  hgvsc: ENST00000360249.4:c.851G>T
  hgvsp: ENSP00000353385.4:p.Gly284Val
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000377959
  ensembl transcript: ENST00000394441
  gene symbol: CALCR
  hgvsc: ENST00000394441.1:c.803G>T
  hgvsp: ENSP00000377959.1:p.Gly268Val
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000389295
  ensembl transcript: ENST00000426151
  gene symbol: CALCR
  hgvsc: ENST00000426151.1:c.803G>T
  hgvsp: ENSP00000389295.1:p.Gly268Val
  variant of: http://identifiers.org/hgnc/1440
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22055
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3593
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1187
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1979
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18217
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8233
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2698
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1570
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8013
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 621
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32115
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1097
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Gly302Val
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: Other
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ

7-93067585-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93067585
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 93067585
    reference: chr 7
allele count: 9
allele frequency: 7.459099272323427e-5
allele num: 120658
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000413179
  ensembl transcript: ENST00000415529
  gene symbol: CALCR
  hgvsc: ENST00000415529.1:c.*28-3T>C
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000389295
  ensembl transcript: ENST00000426151
  gene symbol: CALCR
  hgvsc: ENST00000426151.1:c.803-3T>C
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000399552
  ensembl transcript: ENST00000421592
  gene symbol: CALCR
  hgvsc: ENST00000421592.1:c.851-3T>C
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000391369
  ensembl transcript: ENST00000423724
  gene symbol: CALCR
  hgvsc: ENST00000423724.1:c.*28-3T>C
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000352561
  ensembl transcript: ENST00000359558
  gene symbol: CALCR
  hgvsc: ENST00000359558.2:c.905-3T>C
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000377959
  ensembl transcript: ENST00000394441
  gene symbol: CALCR
  hgvsc: ENST00000394441.1:c.803-3T>C
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000353385
  ensembl transcript: ENST00000360249
  gene symbol: CALCR
  hgvsc: ENST00000360249.4:c.851-3T>C
  variant of: http://identifiers.org/hgnc/1440
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3585
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 834
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8219
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 849
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21859
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1179
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1978
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18149
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 31813
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3559
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 744
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 222
  bin: 2.75e1
  variant carriers: 0
hgvs: c.905-3T>C
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum

http://identifiers.org/exac.variant/7-93067597-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93067597
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 93067597
    reference: chr 7
allele count: 2299
allele frequency: 1.910261736601579e-2
allele num: 120350
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000389295
  ensembl transcript: ENST00000426151
  gene symbol: CALCR
  hgvsc: ENST00000426151.1:c.803-15T>G
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000391369
  ensembl transcript: ENST00000423724
  gene symbol: CALCR
  hgvsc: ENST00000423724.1:c.*28-15T>G
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000353385
  ensembl transcript: ENST00000360249
  gene symbol: CALCR
  hgvsc: ENST00000360249.4:c.851-15T>G
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000413179
  ensembl transcript: ENST00000415529
  gene symbol: CALCR
  hgvsc: ENST00000415529.1:c.*28-15T>G
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000377959
  ensembl transcript: ENST00000394441
  gene symbol: CALCR
  hgvsc: ENST00000394441.1:c.803-15T>G
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000352561
  ensembl transcript: ENST00000359558
  gene symbol: CALCR
  hgvsc: ENST00000359558.2:c.905-15T>G
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000399552
  ensembl transcript: ENST00000421592
  gene symbol: CALCR
  hgvsc: ENST00000421592.1:c.851-15T>G
  variant of: http://identifiers.org/hgnc/1440
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3578
  bin: 3.75e1
  variant carriers: 204
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 6.75e1
  variant carriers: 106
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 7.25e1
  variant carriers: 96
genotype depth: GenotypeDepth
  all individuals: 8012
  bin: 3.25e1
  variant carriers: 210
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 8.75e1
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 20178
  bin: 2.25e1
  variant carriers: 83
genotype depth: GenotypeDepth
  all individuals: 2058
  bin: 4.25e1
  variant carriers: 210
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 9.25e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1753
  bin: 1.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 7.75e1
  variant carriers: 66
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 5.75e1
  variant carriers: 194
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 1.75e1
  variant carriers: 51
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 8.25e1
  variant carriers: 37
genotype depth: GenotypeDepth
  all individuals: 1007
  bin: 5.25e1
  variant carriers: 226
genotype depth: GenotypeDepth
  all individuals: 1311
  bin: 4.75e1
  variant carriers: 213
genotype depth: GenotypeDepth
  all individuals: 17364
  bin: 2.75e1
  variant carriers: 148
genotype depth: GenotypeDepth
  all individuals: 826
  bin: 9.75e1
  variant carriers: 205
genotype depth: GenotypeDepth
  all individuals: 636
  bin: 6.25e1
  variant carriers: 151
genotype quality: GenotypeQuality
  all individuals: 436
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 699
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 224
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7151
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2427
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9654
  bin: 9.75e1
  variant carriers: 2257
genotype quality: GenotypeQuality
  all individuals: 481
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 32
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: African
population: South Asian
reference allele: A
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum

7-93067597-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93067597
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 93067597
    reference: chr 7
allele count: 1
allele frequency: 8.309098462816784e-6
allele num: 120350
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000353385
  ensembl transcript: ENST00000360249
  gene symbol: CALCR
  hgvsc: ENST00000360249.4:c.851-15T>C
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000413179
  ensembl transcript: ENST00000415529
  gene symbol: CALCR
  hgvsc: ENST00000415529.1:c.*28-15T>C
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000352561
  ensembl transcript: ENST00000359558
  gene symbol: CALCR
  hgvsc: ENST00000359558.2:c.905-15T>C
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000389295
  ensembl transcript: ENST00000426151
  gene symbol: CALCR
  hgvsc: ENST00000426151.1:c.803-15T>C
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000399552
  ensembl transcript: ENST00000421592
  gene symbol: CALCR
  hgvsc: ENST00000421592.1:c.851-15T>C
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000377959
  ensembl transcript: ENST00000394441
  gene symbol: CALCR
  hgvsc: ENST00000394441.1:c.803-15T>C
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000391369
  ensembl transcript: ENST00000423724
  gene symbol: CALCR
  hgvsc: ENST00000423724.1:c.*28-15T>C
  variant of: http://identifiers.org/hgnc/1440
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17364
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3578
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1753
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8012
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20178
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1311
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2058
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1007
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 826
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 636
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 481
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 180
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7151
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2547
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 224
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: A
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: QD

7-93067598-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93067598
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 93067598
    reference: chr 7
allele count: 32
allele frequency: 2.659618677172161e-4
allele num: 120318
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000377959
  ensembl transcript: ENST00000394441
  gene symbol: CALCR
  hgvsc: ENST00000394441.1:c.803-16C>T
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000353385
  ensembl transcript: ENST00000360249
  gene symbol: CALCR
  hgvsc: ENST00000360249.4:c.851-16C>T
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000391369
  ensembl transcript: ENST00000423724
  gene symbol: CALCR
  hgvsc: ENST00000423724.1:c.*28-16C>T
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000399552
  ensembl transcript: ENST00000421592
  gene symbol: CALCR
  hgvsc: ENST00000421592.1:c.851-16C>T
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000413179
  ensembl transcript: ENST00000415529
  gene symbol: CALCR
  hgvsc: ENST00000415529.1:c.*28-16C>T
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000389295
  ensembl transcript: ENST00000426151
  gene symbol: CALCR
  hgvsc: ENST00000426151.1:c.803-16C>T
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000352561
  ensembl transcript: ENST00000359558
  gene symbol: CALCR
  hgvsc: ENST00000359558.2:c.905-16C>T
  variant of: http://identifiers.org/hgnc/1440
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18007
  bin: 2.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1841
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20265
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3610
  bin: 3.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1951
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 830
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8302
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 826
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1167
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 198
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30470
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 511
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 463
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: ClippingRankSum

7-93067605-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93067605
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 93067605
    reference: chr 7
allele count: 2
allele frequency: 1.664502813009754e-5
allele num: 120156
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000389295
  ensembl transcript: ENST00000426151
  gene symbol: CALCR
  hgvsc: ENST00000426151.1:c.803-23A>T
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000377959
  ensembl transcript: ENST00000394441
  gene symbol: CALCR
  hgvsc: ENST00000394441.1:c.803-23A>T
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000413179
  ensembl transcript: ENST00000415529
  gene symbol: CALCR
  hgvsc: ENST00000415529.1:c.*28-23A>T
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000391369
  ensembl transcript: ENST00000423724
  gene symbol: CALCR
  hgvsc: ENST00000423724.1:c.*28-23A>T
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000399552
  ensembl transcript: ENST00000421592
  gene symbol: CALCR
  hgvsc: ENST00000421592.1:c.851-23A>T
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000352561
  ensembl transcript: ENST00000359558
  gene symbol: CALCR
  hgvsc: ENST00000359558.2:c.905-23A>T
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000353385
  ensembl transcript: ENST00000360249
  gene symbol: CALCR
  hgvsc: ENST00000360249.4:c.851-23A>T
  variant of: http://identifiers.org/hgnc/1440
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1164
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1890
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1948
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18913
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17352
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8165
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2876
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3595
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 992
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1649
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1534
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3476
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2629
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28215
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 292
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 321
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 300
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
reference allele: T
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/7-93067608-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93067608
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 93067608
    reference: chr 7
allele count: 1
allele frequency: 8.329585020074299e-6
allele num: 120054
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000353385
  ensembl transcript: ENST00000360249
  gene symbol: CALCR
  hgvsc: ENST00000360249.4:c.851-26G>T
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000399552
  ensembl transcript: ENST00000421592
  gene symbol: CALCR
  hgvsc: ENST00000421592.1:c.851-26G>T
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000413179
  ensembl transcript: ENST00000415529
  gene symbol: CALCR
  hgvsc: ENST00000415529.1:c.*28-26G>T
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000389295
  ensembl transcript: ENST00000426151
  gene symbol: CALCR
  hgvsc: ENST00000426151.1:c.803-26G>T
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000352561
  ensembl transcript: ENST00000359558
  gene symbol: CALCR
  hgvsc: ENST00000359558.2:c.905-26G>T
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000377959
  ensembl transcript: ENST00000394441
  gene symbol: CALCR
  hgvsc: ENST00000394441.1:c.803-26G>T
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000391369
  ensembl transcript: ENST00000423724
  gene symbol: CALCR
  hgvsc: ENST00000423724.1:c.*28-26G>T
  variant of: http://identifiers.org/hgnc/1440
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2678
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1951
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16932
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3585
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1165
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3271
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
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genotype depth: GenotypeDepth
  all individuals: 18176
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
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genotype depth: GenotypeDepth
  all individuals: 705
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8118
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2535
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26980
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1699
  bin: 3.25e1
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genotype quality: GenotypeQuality
  all individuals: 1071
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3456
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 317
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1799
  bin: 2.25e1
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genotype quality: GenotypeQuality
  all individuals: 1321
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7192
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum

7-93067611-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93067611
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 93067611
    reference: chr 7
allele count: 3
allele frequency: 2.501250625312656e-5
allele num: 119940
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000389295
  ensembl transcript: ENST00000426151
  gene symbol: CALCR
  hgvsc: ENST00000426151.1:c.803-29A>G
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000399552
  ensembl transcript: ENST00000421592
  gene symbol: CALCR
  hgvsc: ENST00000421592.1:c.851-29A>G
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000353385
  ensembl transcript: ENST00000360249
  gene symbol: CALCR
  hgvsc: ENST00000360249.4:c.851-29A>G
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000391369
  ensembl transcript: ENST00000423724
  gene symbol: CALCR
  hgvsc: ENST00000423724.1:c.*28-29A>G
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000413179
  ensembl transcript: ENST00000415529
  gene symbol: CALCR
  hgvsc: ENST00000415529.1:c.*28-29A>G
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000377959
  ensembl transcript: ENST00000394441
  gene symbol: CALCR
  hgvsc: ENST00000394441.1:c.803-29A>G
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000352561
  ensembl transcript: ENST00000359558
  gene symbol: CALCR
  hgvsc: ENST00000359558.2:c.905-29A>G
  variant of: http://identifiers.org/hgnc/1440
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1162
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4320
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16294
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1948
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3574
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16845
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7989
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3702
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
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genotype depth: GenotypeDepth
  all individuals: 705
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 728
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1235
  bin: 2.75e1
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genotype quality: GenotypeQuality
  all individuals: 736
  bin: 5.75e1
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genotype quality: GenotypeQuality
  all individuals: 7775
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  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 24612
  bin: 6.25e1
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genotype quality: GenotypeQuality
  all individuals: 50
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genotype quality: GenotypeQuality
  all individuals: 838
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genotype quality: GenotypeQuality
  all individuals: 17
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genotype quality: GenotypeQuality
  all individuals: 76
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
reference allele: T
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff

7-93067614-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93067614
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 93067614
    reference: chr 7
allele count: 1
allele frequency: 8.34125752798492e-6
allele num: 119886
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000391369
  ensembl transcript: ENST00000423724
  gene symbol: CALCR
  hgvsc: ENST00000423724.1:c.*28-32C>G
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000413179
  ensembl transcript: ENST00000415529
  gene symbol: CALCR
  hgvsc: ENST00000415529.1:c.*28-32C>G
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000399552
  ensembl transcript: ENST00000421592
  gene symbol: CALCR
  hgvsc: ENST00000421592.1:c.851-32C>G
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000377959
  ensembl transcript: ENST00000394441
  gene symbol: CALCR
  hgvsc: ENST00000394441.1:c.803-32C>G
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000352561
  ensembl transcript: ENST00000359558
  gene symbol: CALCR
  hgvsc: ENST00000359558.2:c.905-32C>G
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000353385
  ensembl transcript: ENST00000360249
  gene symbol: CALCR
  hgvsc: ENST00000360249.4:c.851-32C>G
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000389295
  ensembl transcript: ENST00000426151
  gene symbol: CALCR
  hgvsc: ENST00000426151.1:c.803-32C>G
  variant of: http://identifiers.org/hgnc/1440
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7854
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3727
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3563
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4294
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1161
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 1
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 705
  bin: 9.75e1
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genotype depth: GenotypeDepth
  all individuals: 175
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 730
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7774
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1941
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.5e0
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 3394
  bin: 7.75e1
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genotype quality: GenotypeQuality
  all individuals: 2011
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 503
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genotype quality: GenotypeQuality
  all individuals: 738
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1069
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
reference allele: G
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum

7-93067616-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93067616
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 93067616
    reference: chr 7
allele count: 1
allele frequency: 8.341814177747376e-6
allele num: 119878
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000391369
  ensembl transcript: ENST00000423724
  gene symbol: CALCR
  hgvsc: ENST00000423724.1:c.*28-34A>G
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000389295
  ensembl transcript: ENST00000426151
  gene symbol: CALCR
  hgvsc: ENST00000426151.1:c.803-34A>G
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000399552
  ensembl transcript: ENST00000421592
  gene symbol: CALCR
  hgvsc: ENST00000421592.1:c.851-34A>G
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000413179
  ensembl transcript: ENST00000415529
  gene symbol: CALCR
  hgvsc: ENST00000415529.1:c.*28-34A>G
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000377959
  ensembl transcript: ENST00000394441
  gene symbol: CALCR
  hgvsc: ENST00000394441.1:c.803-34A>G
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000353385
  ensembl transcript: ENST00000360249
  gene symbol: CALCR
  hgvsc: ENST00000360249.4:c.851-34A>G
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000352561
  ensembl transcript: ENST00000359558
  gene symbol: CALCR
  hgvsc: ENST00000359558.2:c.905-34A>G
  variant of: http://identifiers.org/hgnc/1440
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16452
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1160
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7740
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5533
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3846
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3550
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15559
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1946
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2525
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1069
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23832
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1027
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2092
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 970
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2481
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7774
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: Other
reference allele: T
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum

7-93067616-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93067616
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 93067616
    reference: chr 7
allele count: 1
allele frequency: 8.341814177747376e-6
allele num: 119878
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000399552
  ensembl transcript: ENST00000421592
  gene symbol: CALCR
  hgvsc: ENST00000421592.1:c.851-34A>C
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000377959
  ensembl transcript: ENST00000394441
  gene symbol: CALCR
  hgvsc: ENST00000394441.1:c.803-34A>C
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000389295
  ensembl transcript: ENST00000426151
  gene symbol: CALCR
  hgvsc: ENST00000426151.1:c.803-34A>C
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000413179
  ensembl transcript: ENST00000415529
  gene symbol: CALCR
  hgvsc: ENST00000415529.1:c.*28-34A>C
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000353385
  ensembl transcript: ENST00000360249
  gene symbol: CALCR
  hgvsc: ENST00000360249.4:c.851-34A>C
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000391369
  ensembl transcript: ENST00000423724
  gene symbol: CALCR
  hgvsc: ENST00000423724.1:c.*28-34A>C
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000352561
  ensembl transcript: ENST00000359558
  gene symbol: CALCR
  hgvsc: ENST00000359558.2:c.905-34A>C
  variant of: http://identifiers.org/hgnc/1440
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5533
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3846
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1946
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16452
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15559
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1160
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3550
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7740
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2392
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23832
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 970
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 495
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2491
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 564
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1324
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
population: European (Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum

http://identifiers.org/exac.variant/7-93067629-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93067629
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 93067629
    reference: chr 7
allele count: 2
allele frequency: 1.677120719149364e-5
allele num: 119252
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000391369
  ensembl transcript: ENST00000423724
  gene symbol: CALCR
  hgvsc: ENST00000423724.1:c.*28-47G>T
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000352561
  ensembl transcript: ENST00000359558
  gene symbol: CALCR
  hgvsc: ENST00000359558.2:c.905-47G>T
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000389295
  ensembl transcript: ENST00000426151
  gene symbol: CALCR
  hgvsc: ENST00000426151.1:c.803-47G>T
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000353385
  ensembl transcript: ENST00000360249
  gene symbol: CALCR
  hgvsc: ENST00000360249.4:c.851-47G>T
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000377959
  ensembl transcript: ENST00000394441
  gene symbol: CALCR
  hgvsc: ENST00000394441.1:c.803-47G>T
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000399552
  ensembl transcript: ENST00000421592
  gene symbol: CALCR
  hgvsc: ENST00000421592.1:c.851-47G>T
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000413179
  ensembl transcript: ENST00000415529
  gene symbol: CALCR
  hgvsc: ENST00000415529.1:c.*28-47G>T
  variant of: http://identifiers.org/hgnc/1440
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1158
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3910
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7146
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8158
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17180
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12592
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3517
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 705
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1938
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1520
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2048
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2271
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3833
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2672
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2503
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3146
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1562
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
population: Latino
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: QD

7-93067631-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93067631
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 93067631
    reference: chr 7
allele count: 3
allele frequency: 2.51669407066877e-5
allele num: 119204
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000389295
  ensembl transcript: ENST00000426151
  gene symbol: CALCR
  hgvsc: ENST00000426151.1:c.803-49A>G
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000391369
  ensembl transcript: ENST00000423724
  gene symbol: CALCR
  hgvsc: ENST00000423724.1:c.*28-49A>G
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000399552
  ensembl transcript: ENST00000421592
  gene symbol: CALCR
  hgvsc: ENST00000421592.1:c.851-49A>G
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000377959
  ensembl transcript: ENST00000394441
  gene symbol: CALCR
  hgvsc: ENST00000394441.1:c.803-49A>G
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000413179
  ensembl transcript: ENST00000415529
  gene symbol: CALCR
  hgvsc: ENST00000415529.1:c.*28-49A>G
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000352561
  ensembl transcript: ENST00000359558
  gene symbol: CALCR
  hgvsc: ENST00000359558.2:c.905-49A>G
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000353385
  ensembl transcript: ENST00000360249
  gene symbol: CALCR
  hgvsc: ENST00000360249.4:c.851-49A>G
  variant of: http://identifiers.org/hgnc/1440
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12571
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1158
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3512
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 845
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3910
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1938
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17303
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8133
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7048
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2383
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4485
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3377
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3303
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3846
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1582
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1518
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3143
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 298
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
population: Latino
population: Other
population: European (Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: MQ

7-93070793-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93070793
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 93070793
    reference: chr 7
allele count: 1
allele frequency: 8.164598301763554e-5
allele num: 12248
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000352561
  ensembl transcript: ENST00000359558
  gene symbol: CALCR
  hgvsc: ENST00000359558.2:c.904+2123C>T
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000413179
  ensembl transcript: ENST00000415529
  gene symbol: CALCR
  hgvsc: ENST00000415529.1:c.*27+19C>T
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000353385
  ensembl transcript: ENST00000360249
  gene symbol: CALCR
  hgvsc: ENST00000360249.4:c.850+2123C>T
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000391369
  ensembl transcript: ENST00000423724
  gene symbol: CALCR
  hgvsc: ENST00000423724.1:c.*27+19C>T
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000377959
  ensembl transcript: ENST00000394441
  gene symbol: CALCR
  hgvsc: ENST00000394441.1:c.802+2123C>T
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000399552
  ensembl transcript: ENST00000421592
  gene symbol: CALCR
  hgvsc: ENST00000421592.1:c.850+2123C>T
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000389295
  ensembl transcript: ENST00000426151
  gene symbol: CALCR
  hgvsc: ENST00000426151.1:c.802+2123C>T
  variant of: http://identifiers.org/hgnc/1440
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1259
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 717
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1129
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2217
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1067
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 481
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 362
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1625
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: European (Finnish)
reference allele: G
site quality: FS
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum

7-93070799-AGGG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93070799
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 93070796
    reference: chr 7
allele count: 1
allele frequency: 8.159268929503917e-5
allele num: 12256
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000352561
  ensembl transcript: ENST00000359558
  gene symbol: CALCR
  hgvsc: ENST00000359558.2:c.904+2114_904+2116delCCC
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000413179
  ensembl transcript: ENST00000415529
  gene symbol: CALCR
  hgvsc: ENST00000415529.1:c.*27+10_*27+12delCCC
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000389295
  ensembl transcript: ENST00000426151
  gene symbol: CALCR
  hgvsc: ENST00000426151.1:c.802+2114_802+2116delCCC
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000353385
  ensembl transcript: ENST00000360249
  gene symbol: CALCR
  hgvsc: ENST00000360249.4:c.850+2114_850+2116delCCC
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000391369
  ensembl transcript: ENST00000423724
  gene symbol: CALCR
  hgvsc: ENST00000423724.1:c.*27+10_*27+12delCCC
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000399552
  ensembl transcript: ENST00000421592
  gene symbol: CALCR
  hgvsc: ENST00000421592.1:c.850+2114_850+2116delCCC
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000377959
  ensembl transcript: ENST00000394441
  gene symbol: CALCR
  hgvsc: ENST00000394441.1:c.802+2114_802+2116delCCC
  variant of: http://identifiers.org/hgnc/1440
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2147
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1292
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1129
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1077
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 478
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1963
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1730
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 373
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
reference allele: AGGG
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD

7-93070802-G-GCCCTCTCATGTACA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93070802
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 93070816
    reference: chr 7
allele count: 1
allele frequency: 8.156606851549755e-5
allele num: 12260
alternate allele: GCCCTCTCATGTACA
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000352561
  ensembl transcript: ENST00000359558
  gene symbol: CALCR
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000353385
  ensembl transcript: ENST00000360249
  gene symbol: CALCR
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000377959
  ensembl transcript: ENST00000394441
  gene symbol: CALCR
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000399552
  ensembl transcript: ENST00000421592
  gene symbol: CALCR
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000389295
  ensembl transcript: ENST00000426151
  gene symbol: CALCR
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000391369
  ensembl transcript: ENST00000423724
  gene symbol: CALCR
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000413179
  ensembl transcript: ENST00000415529
  gene symbol: CALCR
  variant of: http://identifiers.org/hgnc/1440
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1136
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1300
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1080
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2070
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 475
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1291
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 353
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 293
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 384
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1691
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD

7-93070807-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93070807
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 93070807
    reference: chr 7
allele count: 1
allele frequency: 8.161932745674175e-5
allele num: 12252
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000413179
  ensembl transcript: ENST00000415529
  gene symbol: CALCR
  hgvsc: ENST00000415529.1:c.*27+5G>A
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000377959
  ensembl transcript: ENST00000394441
  gene symbol: CALCR
  hgvsc: ENST00000394441.1:c.802+2109G>A
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000391369
  ensembl transcript: ENST00000423724
  gene symbol: CALCR
  hgvsc: ENST00000423724.1:c.*27+5G>A
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000399552
  ensembl transcript: ENST00000421592
  gene symbol: CALCR
  hgvsc: ENST00000421592.1:c.850+2109G>A
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000352561
  ensembl transcript: ENST00000359558
  gene symbol: CALCR
  hgvsc: ENST00000359558.2:c.904+2109G>A
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000353385
  ensembl transcript: ENST00000360249
  gene symbol: CALCR
  hgvsc: ENST00000360249.4:c.850+2109G>A
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000389295
  ensembl transcript: ENST00000426151
  gene symbol: CALCR
  hgvsc: ENST00000426151.1:c.802+2109G>A
  variant of: http://identifiers.org/hgnc/1440
canonical: false
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1155
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 849
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2019
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1316
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1084
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 476
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1682
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 873
  bin: 6.75e1
  variant carriers: 0
hgvs: c.*27+5G>A
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: DP

http://identifiers.org/exac.variant/7-93070808-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93070808
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 93070808
    reference: chr 7
allele count: 1
allele frequency: 8.153946510110893e-5
allele num: 12264
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000352561
  ensembl transcript: ENST00000359558
  gene symbol: CALCR
  hgvsc: ENST00000359558.2:c.904+2108T>G
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000413179
  ensembl transcript: ENST00000415529
  gene symbol: CALCR
  hgvsc: ENST00000415529.1:c.*27+4T>G
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000391369
  ensembl transcript: ENST00000423724
  gene symbol: CALCR
  hgvsc: ENST00000423724.1:c.*27+4T>G
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000389295
  ensembl transcript: ENST00000426151
  gene symbol: CALCR
  hgvsc: ENST00000426151.1:c.802+2108T>G
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000399552
  ensembl transcript: ENST00000421592
  gene symbol: CALCR
  hgvsc: ENST00000421592.1:c.850+2108T>G
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000377959
  ensembl transcript: ENST00000394441
  gene symbol: CALCR
  hgvsc: ENST00000394441.1:c.802+2108T>G
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000353385
  ensembl transcript: ENST00000360249
  gene symbol: CALCR
  hgvsc: ENST00000360249.4:c.850+2108T>G
  variant of: http://identifiers.org/hgnc/1440
canonical: false
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1155
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1083
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2011
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1318
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2070
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1293
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 883
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 482
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
hgvs: c.*27+4T>G
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
reference allele: A
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD

7-93070811-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93070811
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 93070811
    reference: chr 7
allele count: 2671
allele frequency: 2.178274343500245e-1
allele num: 12262
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000399552
  ensembl transcript: ENST00000421592
  gene symbol: CALCR
  hgvsc: ENST00000421592.1:c.850+2105G>A
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000389295
  ensembl transcript: ENST00000426151
  gene symbol: CALCR
  hgvsc: ENST00000426151.1:c.802+2105G>A
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000353385
  ensembl transcript: ENST00000360249
  gene symbol: CALCR
  hgvsc: ENST00000360249.4:c.850+2105G>A
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000413179
  ensembl transcript: ENST00000415529
  gene symbol: CALCR
  hgvsc: ENST00000415529.1:c.*27+1G>A
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000377959
  ensembl transcript: ENST00000394441
  gene symbol: CALCR
  hgvsc: ENST00000394441.1:c.802+2105G>A
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000391369
  ensembl transcript: ENST00000423724
  gene symbol: CALCR
  hgvsc: ENST00000423724.1:c.*27+1G>A
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000352561
  ensembl transcript: ENST00000359558
  gene symbol: CALCR
  hgvsc: ENST00000359558.2:c.904+2105G>A
  variant of: http://identifiers.org/hgnc/1440
canonical: false
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 5.25e1
  variant carriers: 273
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 1.75e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 4.75e1
  variant carriers: 324
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 7.5e0
  variant carriers: 99
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 5.75e1
  variant carriers: 220
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 2.25e1
  variant carriers: 97
genotype depth: GenotypeDepth
  all individuals: 839
  bin: 4.25e1
  variant carriers: 367
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.25e1
  variant carriers: 39
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 8.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 6.75e1
  variant carriers: 72
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 2.75e1
  variant carriers: 161
genotype depth: GenotypeDepth
  all individuals: 1097
  bin: 3.25e1
  variant carriers: 256
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1017
  bin: 3.75e1
  variant carriers: 329
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 1.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 1650
  bin: 2.5e0
  variant carriers: 133
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.25e1
  variant carriers: 139
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.75e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 1.25e1
  variant carriers: 24
genotype quality: GenotypeQuality
  all individuals: 226
  bin: 7.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 2646
  bin: 9.75e1
  variant carriers: 2304
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 1.75e1
  variant carriers: 35
genotype quality: GenotypeQuality
  all individuals: 679
  bin: 6.75e1
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 5.25e1
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 2.25e1
  variant carriers: 23
genotype quality: GenotypeQuality
  all individuals: 1262
  bin: 7.5e0
  variant carriers: 88
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.75e1
  variant carriers: 9
hgvs: c.*27+1G>A
num of homozygotes: 311
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum

7-93070827-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93070827
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 93070827
    reference: chr 7
allele count: 4
allele frequency: 3.255738238645613e-4
allele num: 12286
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000399552
  ensembl transcript: ENST00000421592
  gene symbol: CALCR
  hgvsc: ENST00000421592.1:c.850+2089C>T
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000389295
  ensembl transcript: ENST00000426151
  gene symbol: CALCR
  hgvsc: ENST00000426151.1:c.802+2089C>T
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000352561
  ensembl transcript: ENST00000359558
  gene symbol: CALCR
  hgvsc: ENST00000359558.2:c.904+2089C>T
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000391369
  ensembl transcript: ENST00000423724
  gene symbol: CALCR
  hgvsc: ENST00000423724.1:c.*12C>T
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000353385
  ensembl transcript: ENST00000360249
  gene symbol: CALCR
  hgvsc: ENST00000360249.4:c.850+2089C>T
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000377959
  ensembl transcript: ENST00000394441
  gene symbol: CALCR
  hgvsc: ENST00000394441.1:c.802+2089C>T
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000413179
  ensembl transcript: ENST00000415529
  gene symbol: CALCR
  hgvsc: ENST00000415529.1:c.*12C>T
  variant of: http://identifiers.org/hgnc/1440
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1131
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1866
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 865
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1757
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD

7-93070828-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93070828
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 93070828
    reference: chr 7
allele count: 4
allele frequency: 3.255208333333333e-4
allele num: 12288
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000413179
  ensembl transcript: ENST00000415529
  gene symbol: CALCR
  hgvsc: ENST00000415529.1:c.*11C>T
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000391369
  ensembl transcript: ENST00000423724
  gene symbol: CALCR
  hgvsc: ENST00000423724.1:c.*11C>T
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000399552
  ensembl transcript: ENST00000421592
  gene symbol: CALCR
  hgvsc: ENST00000421592.1:c.850+2088C>T
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000389295
  ensembl transcript: ENST00000426151
  gene symbol: CALCR
  hgvsc: ENST00000426151.1:c.802+2088C>T
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000352561
  ensembl transcript: ENST00000359558
  gene symbol: CALCR
  hgvsc: ENST00000359558.2:c.904+2088C>T
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000377959
  ensembl transcript: ENST00000394441
  gene symbol: CALCR
  hgvsc: ENST00000394441.1:c.802+2088C>T
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000353385
  ensembl transcript: ENST00000360249
  gene symbol: CALCR
  hgvsc: ENST00000360249.4:c.850+2088C>T
  variant of: http://identifiers.org/hgnc/1440
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 867
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1855
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 4.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 396
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1757
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1241
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: ReadPosRankSum

7-93070851-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93070851
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 93070851
    reference: chr 7
allele count: 8
allele frequency: 6.519967400162999e-4
allele num: 12270
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000413179
  ensembl transcript: ENST00000415529
  gene symbol: CALCR
  hgvsc: ENST00000415529.1:c.813C>T
  hgvsp: ENST00000415529.1:c.813C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000399552
  ensembl transcript: ENST00000421592
  gene symbol: CALCR
  hgvsc: ENST00000421592.1:c.850+2065C>T
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000377959
  ensembl transcript: ENST00000394441
  gene symbol: CALCR
  hgvsc: ENST00000394441.1:c.802+2065C>T
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000389295
  ensembl transcript: ENST00000426151
  gene symbol: CALCR
  hgvsc: ENST00000426151.1:c.802+2065C>T
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000353385
  ensembl transcript: ENST00000360249
  gene symbol: CALCR
  hgvsc: ENST00000360249.4:c.850+2065C>T
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000352561
  ensembl transcript: ENST00000359558
  gene symbol: CALCR
  hgvsc: ENST00000359558.2:c.904+2065C>T
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000391369
  ensembl transcript: ENST00000423724
  gene symbol: CALCR
  hgvsc: ENST00000423724.1:c.861C>T
  hgvsp: ENST00000423724.1:c.861C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1440
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1017
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1125
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1122
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 835
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 380
  bin: 9.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 402
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1204
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Phe287Phe
num of homozygotes: 1
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
population: African
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP

7-93070857-TG-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93070857
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 93070856
    reference: chr 7
allele count: 1
allele frequency: 8.18732601932209e-5
allele num: 12214
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000352561
  ensembl transcript: ENST00000359558
  gene symbol: CALCR
  hgvsc: ENST00000359558.2:c.904+2058delC
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000391369
  ensembl transcript: ENST00000423724
  gene symbol: CALCR
  hgvsc: ENST00000423724.1:c.854delC
  hgvsp: ENSP00000391369.1:p.Pro285GlnfsTer35
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000377959
  ensembl transcript: ENST00000394441
  gene symbol: CALCR
  hgvsc: ENST00000394441.1:c.802+2058delC
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000389295
  ensembl transcript: ENST00000426151
  gene symbol: CALCR
  hgvsc: ENST00000426151.1:c.802+2058delC
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000399552
  ensembl transcript: ENST00000421592
  gene symbol: CALCR
  hgvsc: ENST00000421592.1:c.850+2058delC
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000353385
  ensembl transcript: ENST00000360249
  gene symbol: CALCR
  hgvsc: ENST00000360249.4:c.850+2058delC
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000413179
  ensembl transcript: ENST00000415529
  gene symbol: CALCR
  hgvsc: ENST00000415529.1:c.806delC
  hgvsp: ENSP00000413179.1:p.Pro269GlnfsTer35
  variant of: http://identifiers.org/hgnc/1440
canonical: false
consequence: frameshift
filter: VQSRTrancheINDEL96.00to97.00
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 865
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1065
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1078
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 873
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 339
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 384
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 882
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1082
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2236
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Pro285GlnfsTer35
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: TG
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum

7-93070870-GA-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93070870
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 93070869
    reference: chr 7
allele count: 5200
allele frequency: 4.740200546946217e-1
allele num: 10970
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000413179
  ensembl transcript: ENST00000415529
  gene symbol: CALCR
  hgvsc: ENST00000415529.1:c.803-10delT
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000353385
  ensembl transcript: ENST00000360249
  gene symbol: CALCR
  hgvsc: ENST00000360249.4:c.850+2045delT
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000377959
  ensembl transcript: ENST00000394441
  gene symbol: CALCR
  hgvsc: ENST00000394441.1:c.802+2045delT
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000352561
  ensembl transcript: ENST00000359558
  gene symbol: CALCR
  hgvsc: ENST00000359558.2:c.904+2045delT
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000389295
  ensembl transcript: ENST00000426151
  gene symbol: CALCR
  hgvsc: ENST00000426151.1:c.802+2045delT
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000399552
  ensembl transcript: ENST00000421592
  gene symbol: CALCR
  hgvsc: ENST00000421592.1:c.850+2045delT
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000391369
  ensembl transcript: ENST00000423724
  gene symbol: CALCR
  hgvsc: ENST00000423724.1:c.851-10delT
  variant of: http://identifiers.org/hgnc/1440
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 6.25e1
  variant carriers: 80
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 5.25e1
  variant carriers: 347
genotype depth: GenotypeDepth
  all individuals: 900
  bin: 4.25e1
  variant carriers: 693
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.75e1
  variant carriers: 39
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 5.75e1
  variant carriers: 186
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.5e0
  variant carriers: 77
genotype depth: GenotypeDepth
  all individuals: 665
  bin: 2.5e0
  variant carriers: 145
genotype depth: GenotypeDepth
  all individuals: 923
  bin: 3.25e1
  variant carriers: 692
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 4.75e1
  variant carriers: 495
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 1.25e1
  variant carriers: 112
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 2.25e1
  variant carriers: 385
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 2.75e1
  variant carriers: 575
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 1.75e1
  variant carriers: 281
genotype depth: GenotypeDepth
  all individuals: 926
  bin: 3.75e1
  variant carriers: 692
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 4.75e1
  variant carriers: 105
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 6.75e1
  variant carriers: 70
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 9.25e1
  variant carriers: 45
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 7.25e1
  variant carriers: 75
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 4.25e1
  variant carriers: 101
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 5.25e1
  variant carriers: 93
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 8.75e1
  variant carriers: 49
genotype quality: GenotypeQuality
  all individuals: 494
  bin: 2.5e0
  variant carriers: 100
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 5.75e1
  variant carriers: 89
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 7.75e1
  variant carriers: 57
num of homozygotes: 947
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
reference allele: GA
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff

7-93070870-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93070870
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 93070870
    reference: chr 7
allele count: 2
allele frequency: 1.823154056517776e-4
allele num: 10970
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000399552
  ensembl transcript: ENST00000421592
  gene symbol: CALCR
  hgvsc: ENST00000421592.1:c.850+2046C>G
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000353385
  ensembl transcript: ENST00000360249
  gene symbol: CALCR
  hgvsc: ENST00000360249.4:c.850+2046C>G
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000377959
  ensembl transcript: ENST00000394441
  gene symbol: CALCR
  hgvsc: ENST00000394441.1:c.802+2046C>G
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000389295
  ensembl transcript: ENST00000426151
  gene symbol: CALCR
  hgvsc: ENST00000426151.1:c.802+2046C>G
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000391369
  ensembl transcript: ENST00000423724
  gene symbol: CALCR
  hgvsc: ENST00000423724.1:c.851-9C>G
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000352561
  ensembl transcript: ENST00000359558
  gene symbol: CALCR
  hgvsc: ENST00000359558.2:c.904+2046C>G
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000413179
  ensembl transcript: ENST00000415529
  gene symbol: CALCR
  hgvsc: ENST00000415529.1:c.803-9C>G
  variant of: http://identifiers.org/hgnc/1440
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 923
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 900
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 665
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 926
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 536
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3925
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 494
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ

7-93070870-G-GA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93070870
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 93070871
    reference: chr 7
allele count: 86
allele frequency: 7.839562443026436e-3
allele num: 10970
alternate allele: GA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000377959
  ensembl transcript: ENST00000394441
  gene symbol: CALCR
  hgvsc: ENST00000394441.1:c.802+2045dupT
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000413179
  ensembl transcript: ENST00000415529
  gene symbol: CALCR
  hgvsc: ENST00000415529.1:c.803-10dupT
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000352561
  ensembl transcript: ENST00000359558
  gene symbol: CALCR
  hgvsc: ENST00000359558.2:c.904+2045dupT
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000399552
  ensembl transcript: ENST00000421592
  gene symbol: CALCR
  hgvsc: ENST00000421592.1:c.850+2045dupT
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000353385
  ensembl transcript: ENST00000360249
  gene symbol: CALCR
  hgvsc: ENST00000360249.4:c.850+2045dupT
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000391369
  ensembl transcript: ENST00000423724
  gene symbol: CALCR
  hgvsc: ENST00000423724.1:c.851-10dupT
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000389295
  ensembl transcript: ENST00000426151
  gene symbol: CALCR
  hgvsc: ENST00000426151.1:c.802+2045dupT
  variant of: http://identifiers.org/hgnc/1440
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 900
  bin: 4.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 5.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 2.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 4.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 926
  bin: 3.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 665
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 5.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 923
  bin: 3.25e1
  variant carriers: 20
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 8.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 5.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 3.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 7.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 494
  bin: 2.5e0
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 2.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 1.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 536
  bin: 7.5e0
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 4.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 6.25e1
  variant carriers: 4
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD

7-93070870-GAA-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93070870
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 93070868
    reference: chr 7
allele count: 2271
allele frequency: 2.070191431175934e-1
allele num: 10970
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000391369
  ensembl transcript: ENST00000423724
  gene symbol: CALCR
  hgvsc: ENST00000423724.1:c.851-11_851-10delTT
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000413179
  ensembl transcript: ENST00000415529
  gene symbol: CALCR
  hgvsc: ENST00000415529.1:c.803-11_803-10delTT
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000353385
  ensembl transcript: ENST00000360249
  gene symbol: CALCR
  hgvsc: ENST00000360249.4:c.850+2044_850+2045delTT
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000352561
  ensembl transcript: ENST00000359558
  gene symbol: CALCR
  hgvsc: ENST00000359558.2:c.904+2044_904+2045delTT
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000399552
  ensembl transcript: ENST00000421592
  gene symbol: CALCR
  hgvsc: ENST00000421592.1:c.850+2044_850+2045delTT
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000389295
  ensembl transcript: ENST00000426151
  gene symbol: CALCR
  hgvsc: ENST00000426151.1:c.802+2044_802+2045delTT
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000377959
  ensembl transcript: ENST00000394441
  gene symbol: CALCR
  hgvsc: ENST00000394441.1:c.802+2044_802+2045delTT
  variant of: http://identifiers.org/hgnc/1440
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 1.25e1
  variant carriers: 39
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 6.25e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.5e0
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 2.75e1
  variant carriers: 307
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 5.75e1
  variant carriers: 63
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 923
  bin: 3.25e1
  variant carriers: 351
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 1.75e1
  variant carriers: 109
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 900
  bin: 4.25e1
  variant carriers: 288
genotype depth: GenotypeDepth
  all individuals: 665
  bin: 2.5e0
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 5.25e1
  variant carriers: 141
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 2.25e1
  variant carriers: 182
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 4.75e1
  variant carriers: 205
genotype depth: GenotypeDepth
  all individuals: 926
  bin: 3.75e1
  variant carriers: 345
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 4.25e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 9.25e1
  variant carriers: 28
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 5.25e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 494
  bin: 2.5e0
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 6.75e1
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 2.75e1
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 3.75e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 2.25e1
  variant carriers: 15
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 1.25e1
  variant carriers: 15
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 7.75e1
  variant carriers: 15
num of homozygotes: 240
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
reference allele: GAA
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: QD
site quality: MQ

7-93070877-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93070877
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 93070877
    reference: chr 7
allele count: 2
allele frequency: 1.664447403462051e-4
allele num: 12016
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000389295
  ensembl transcript: ENST00000426151
  gene symbol: CALCR
  hgvsc: ENST00000426151.1:c.802+2039T>C
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000413179
  ensembl transcript: ENST00000415529
  gene symbol: CALCR
  hgvsc: ENST00000415529.1:c.803-16T>C
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000391369
  ensembl transcript: ENST00000423724
  gene symbol: CALCR
  hgvsc: ENST00000423724.1:c.851-16T>C
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000399552
  ensembl transcript: ENST00000421592
  gene symbol: CALCR
  hgvsc: ENST00000421592.1:c.850+2039T>C
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000352561
  ensembl transcript: ENST00000359558
  gene symbol: CALCR
  hgvsc: ENST00000359558.2:c.904+2039T>C
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000353385
  ensembl transcript: ENST00000360249
  gene symbol: CALCR
  hgvsc: ENST00000360249.4:c.850+2039T>C
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000377959
  ensembl transcript: ENST00000394441
  gene symbol: CALCR
  hgvsc: ENST00000394441.1:c.802+2039T>C
  variant of: http://identifiers.org/hgnc/1440
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2518
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1398
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1643
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1196
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 379
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
population: Latino
population: East Asian
reference allele: A
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum

7-93070882-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93070882
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 93070882
    reference: chr 7
allele count: 103
allele frequency: 8.694918115819687e-3
allele num: 11846
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000413179
  ensembl transcript: ENST00000415529
  gene symbol: CALCR
  hgvsc: ENST00000415529.1:c.803-21A>G
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000353385
  ensembl transcript: ENST00000360249
  gene symbol: CALCR
  hgvsc: ENST00000360249.4:c.850+2034A>G
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000377959
  ensembl transcript: ENST00000394441
  gene symbol: CALCR
  hgvsc: ENST00000394441.1:c.802+2034A>G
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000389295
  ensembl transcript: ENST00000426151
  gene symbol: CALCR
  hgvsc: ENST00000426151.1:c.802+2034A>G
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000399552
  ensembl transcript: ENST00000421592
  gene symbol: CALCR
  hgvsc: ENST00000421592.1:c.850+2034A>G
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000352561
  ensembl transcript: ENST00000359558
  gene symbol: CALCR
  hgvsc: ENST00000359558.2:c.904+2034A>G
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000391369
  ensembl transcript: ENST00000423724
  gene symbol: CALCR
  hgvsc: ENST00000423724.1:c.851-21A>G
  variant of: http://identifiers.org/hgnc/1440
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2528
  bin: 2.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 4.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 4.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 5.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 3.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 1458
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1611
  bin: 3.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 6.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 5.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 428
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3048
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 271
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1227
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 2
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: Other
reference allele: T
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum

7-93070884-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93070884
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 93070884
    reference: chr 7
allele count: 1
allele frequency: 8.365400702693659e-5
allele num: 11954
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000377959
  ensembl transcript: ENST00000394441
  gene symbol: CALCR
  hgvsc: ENST00000394441.1:c.802+2032C>T
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000413179
  ensembl transcript: ENST00000415529
  gene symbol: CALCR
  hgvsc: ENST00000415529.1:c.803-23C>T
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000389295
  ensembl transcript: ENST00000426151
  gene symbol: CALCR
  hgvsc: ENST00000426151.1:c.802+2032C>T
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000352561
  ensembl transcript: ENST00000359558
  gene symbol: CALCR
  hgvsc: ENST00000359558.2:c.904+2032C>T
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000399552
  ensembl transcript: ENST00000421592
  gene symbol: CALCR
  hgvsc: ENST00000421592.1:c.850+2032C>T
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000391369
  ensembl transcript: ENST00000423724
  gene symbol: CALCR
  hgvsc: ENST00000423724.1:c.851-23C>T
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000353385
  ensembl transcript: ENST00000360249
  gene symbol: CALCR
  hgvsc: ENST00000360249.4:c.850+2032C>T
  variant of: http://identifiers.org/hgnc/1440
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1592
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1485
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2586
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 212
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 286
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 226
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1249
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 450
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3185
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
reference allele: G
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ

7-93070907-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93070907
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 93070907
    reference: chr 7
allele count: 1
allele frequency: 8.620689655172413e-5
allele num: 11600
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000353385
  ensembl transcript: ENST00000360249
  gene symbol: CALCR
  hgvsc: ENST00000360249.4:c.850+2009A>C
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000389295
  ensembl transcript: ENST00000426151
  gene symbol: CALCR
  hgvsc: ENST00000426151.1:c.802+2009A>C
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000391369
  ensembl transcript: ENST00000423724
  gene symbol: CALCR
  hgvsc: ENST00000423724.1:c.851-46A>C
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000377959
  ensembl transcript: ENST00000394441
  gene symbol: CALCR
  hgvsc: ENST00000394441.1:c.802+2009A>C
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000413179
  ensembl transcript: ENST00000415529
  gene symbol: CALCR
  hgvsc: ENST00000415529.1:c.803-46A>C
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000352561
  ensembl transcript: ENST00000359558
  gene symbol: CALCR
  hgvsc: ENST00000359558.2:c.904+2009A>C
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000399552
  ensembl transcript: ENST00000421592
  gene symbol: CALCR
  hgvsc: ENST00000421592.1:c.850+2009A>C
  variant of: http://identifiers.org/hgnc/1440
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1829
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1380
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1126
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1507
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 833
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 383
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 489
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 667
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 591
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 450
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: T
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum

7-93072869-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93072869
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 93072869
    reference: chr 7
allele count: 1
allele frequency: 8.514841368505305e-6
allele num: 117442
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000353385
  ensembl transcript: ENST00000360249
  gene symbol: CALCR
  hgvsc: ENST00000360249.4:c.850+47T>C
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000399552
  ensembl transcript: ENST00000421592
  gene symbol: CALCR
  hgvsc: ENST00000421592.1:c.850+47T>C
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000391369
  ensembl transcript: ENST00000423724
  gene symbol: CALCR
  hgvsc: ENST00000423724.1:c.850+47T>C
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000352561
  ensembl transcript: ENST00000359558
  gene symbol: CALCR
  hgvsc: ENST00000359558.2:c.904+47T>C
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000413179
  ensembl transcript: ENST00000415529
  gene symbol: CALCR
  hgvsc: ENST00000415529.1:c.802+47T>C
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000389295
  ensembl transcript: ENST00000426151
  gene symbol: CALCR
  hgvsc: ENST00000426151.1:c.802+47T>C
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000377959
  ensembl transcript: ENST00000394441
  gene symbol: CALCR
  hgvsc: ENST00000394441.1:c.802+47T>C
  variant of: http://identifiers.org/hgnc/1440
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3135
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10790
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3902
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1624
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8390
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5960
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6092
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2351
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2688
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10866
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 867
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1454
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 828
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5850
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 641
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 781
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17270
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4258
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2195
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1653
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP

7-93072879-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93072879
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 93072879
    reference: chr 7
allele count: 215
allele frequency: 1.825344268418997e-3
allele num: 117786
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000352561
  ensembl transcript: ENST00000359558
  gene symbol: CALCR
  hgvsc: ENST00000359558.2:c.904+37C>T
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000377959
  ensembl transcript: ENST00000394441
  gene symbol: CALCR
  hgvsc: ENST00000394441.1:c.802+37C>T
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000391369
  ensembl transcript: ENST00000423724
  gene symbol: CALCR
  hgvsc: ENST00000423724.1:c.850+37C>T
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000389295
  ensembl transcript: ENST00000426151
  gene symbol: CALCR
  hgvsc: ENST00000426151.1:c.802+37C>T
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000353385
  ensembl transcript: ENST00000360249
  gene symbol: CALCR
  hgvsc: ENST00000360249.4:c.850+37C>T
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000399552
  ensembl transcript: ENST00000421592
  gene symbol: CALCR
  hgvsc: ENST00000421592.1:c.850+37C>T
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000413179
  ensembl transcript: ENST00000415529
  gene symbol: CALCR
  hgvsc: ENST00000415529.1:c.802+37C>T
  variant of: http://identifiers.org/hgnc/1440
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 6.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7191
  bin: 2.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2358
  bin: 5.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 11079
  bin: 2.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 1546
  bin: 7.5e0
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 3909
  bin: 4.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 2871
  bin: 1.25e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8419
  bin: 3.75e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 11134
  bin: 3.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 6.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1343
  bin: 1.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 5978
  bin: 4.25e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 1462
  bin: 5.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 800
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 150
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1692
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 465
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13341
  bin: 6.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1034
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1197
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 5
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD

7-93072884-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93072884
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 93072884
    reference: chr 7
allele count: 6
allele frequency: 5.087505087505087e-5
allele num: 117936
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000389295
  ensembl transcript: ENST00000426151
  gene symbol: CALCR
  hgvsc: ENST00000426151.1:c.802+32A>G
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000352561
  ensembl transcript: ENST00000359558
  gene symbol: CALCR
  hgvsc: ENST00000359558.2:c.904+32A>G
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000391369
  ensembl transcript: ENST00000423724
  gene symbol: CALCR
  hgvsc: ENST00000423724.1:c.850+32A>G
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000377959
  ensembl transcript: ENST00000394441
  gene symbol: CALCR
  hgvsc: ENST00000394441.1:c.802+32A>G
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000353385
  ensembl transcript: ENST00000360249
  gene symbol: CALCR
  hgvsc: ENST00000360249.4:c.850+32A>G
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000413179
  ensembl transcript: ENST00000415529
  gene symbol: CALCR
  hgvsc: ENST00000415529.1:c.802+32A>G
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000399552
  ensembl transcript: ENST00000421592
  gene symbol: CALCR
  hgvsc: ENST00000421592.1:c.850+32A>G
  variant of: http://identifiers.org/hgnc/1440
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1509
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1052
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5984
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3904
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7587
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8431
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 867
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2354
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1454
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11229
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2606
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11225
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 6.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 5995
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 332
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 890
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3056
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2214
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3501
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 742
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD

7-93072891-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93072891
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 93072891
    reference: chr 7
allele count: 2
allele frequency: 1.69030273321952e-5
allele num: 118322
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000391369
  ensembl transcript: ENST00000423724
  gene symbol: CALCR
  hgvsc: ENST00000423724.1:c.850+25T>C
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000353385
  ensembl transcript: ENST00000360249
  gene symbol: CALCR
  hgvsc: ENST00000360249.4:c.850+25T>C
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000413179
  ensembl transcript: ENST00000415529
  gene symbol: CALCR
  hgvsc: ENST00000415529.1:c.802+25T>C
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000352561
  ensembl transcript: ENST00000359558
  gene symbol: CALCR
  hgvsc: ENST00000359558.2:c.904+25T>C
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000377959
  ensembl transcript: ENST00000394441
  gene symbol: CALCR
  hgvsc: ENST00000394441.1:c.802+25T>C
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000389295
  ensembl transcript: ENST00000426151
  gene symbol: CALCR
  hgvsc: ENST00000426151.1:c.802+25T>C
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000399552
  ensembl transcript: ENST00000421592
  gene symbol: CALCR
  hgvsc: ENST00000421592.1:c.850+25T>C
  variant of: http://identifiers.org/hgnc/1440
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8423
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11314
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 867
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2354
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 672
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3904
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11429
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5985
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2008
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1379
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8443
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1454
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 856
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4330
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 587
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3062
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2220
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 628
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
population: European (Finnish)
population: African
population: South Asian
reference allele: A
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD

http://identifiers.org/exac.variant/7-93072916-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93072916
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 93072916
    reference: chr 7
allele count: 3
allele frequency: 2.499541750679042e-5
allele num: 120022
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000413179
  ensembl transcript: ENST00000415529
  gene symbol: CALCR
  hgvsc: ENST00000415529.1:c.802G>T
  hgvsp: ENSP00000413179.1:p.Ala268Ser
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000352561
  ensembl transcript: ENST00000359558
  gene symbol: CALCR
  hgvsc: ENST00000359558.2:c.904G>T
  hgvsp: ENSP00000352561.2:p.Gly302Trp
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000391369
  ensembl transcript: ENST00000423724
  gene symbol: CALCR
  hgvsc: ENST00000423724.1:c.850G>T
  hgvsp: ENSP00000391369.1:p.Ala284Ser
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000399552
  ensembl transcript: ENST00000421592
  gene symbol: CALCR
  hgvsc: ENST00000421592.1:c.850G>T
  hgvsp: ENSP00000399552.1:p.Gly284Trp
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000377959
  ensembl transcript: ENST00000394441
  gene symbol: CALCR
  hgvsc: ENST00000394441.1:c.802G>T
  hgvsp: ENSP00000377959.1:p.Gly268Trp
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000353385
  ensembl transcript: ENST00000360249
  gene symbol: CALCR
  hgvsc: ENST00000360249.4:c.850G>T
  hgvsp: ENSP00000353385.4:p.Gly284Trp
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000389295
  ensembl transcript: ENST00000426151
  gene symbol: CALCR
  hgvsc: ENST00000426151.1:c.802G>T
  hgvsp: ENSP00000389295.1:p.Gly268Trp
  variant of: http://identifiers.org/hgnc/1440
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1454
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10039
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3905
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12273
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11505
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5993
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8473
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2356
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 270
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2223
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Gly302Trp
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: QD
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum

7-93072919-AGCCCAAGAGATAATACC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93072919
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 93072902
    reference: chr 7
allele count: 2
allele frequency: 1.6627315353663e-5
allele num: 120284
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000413179
  ensembl transcript: ENST00000415529
  gene symbol: CALCR
  hgvsp: ENSP00000413179.1:p.Trp261LeufsTer226
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000352561
  ensembl transcript: ENST00000359558
  gene symbol: CALCR
  hgvsp: ENSP00000352561.2:p.Trp295LeufsTer21
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000353385
  ensembl transcript: ENST00000360249
  gene symbol: CALCR
  hgvsp: ENSP00000353385.4:p.Trp277LeufsTer21
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000389295
  ensembl transcript: ENST00000426151
  gene symbol: CALCR
  hgvsp: ENSP00000389295.1:p.Trp261LeufsTer21
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000377959
  ensembl transcript: ENST00000394441
  gene symbol: CALCR
  hgvsp: ENSP00000377959.1:p.Trp261LeufsTer21
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000391369
  ensembl transcript: ENST00000423724
  gene symbol: CALCR
  hgvsp: ENSP00000391369.1:p.Trp277LeufsTer226
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000399552
  ensembl transcript: ENST00000421592
  gene symbol: CALCR
  hgvsp: ENSP00000399552.1:p.Trp277LeufsTer21
  variant of: http://identifiers.org/hgnc/1440
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8465
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2353
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11509
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12377
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10144
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3905
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1454
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5994
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 867
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17654
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4358
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6338
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3124
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 561
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Trp295LeufsTer21
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
population: Latino
population: Other
reference allele: AGCCCAAGAGATAATACC
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: ClippingRankSum

7-93072920-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93072920
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 93072920
    reference: chr 7
allele count: 1
allele frequency: 8.311032063961702e-6
allele num: 120322
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000391369
  ensembl transcript: ENST00000423724
  gene symbol: CALCR
  hgvsc: ENST00000423724.1:c.846C>T
  hgvsp: ENST00000423724.1:c.846C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000377959
  ensembl transcript: ENST00000394441
  gene symbol: CALCR
  hgvsc: ENST00000394441.1:c.798C>T
  hgvsp: ENST00000394441.1:c.798C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000352561
  ensembl transcript: ENST00000359558
  gene symbol: CALCR
  hgvsc: ENST00000359558.2:c.900C>T
  hgvsp: ENST00000359558.2:c.900C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000353385
  ensembl transcript: ENST00000360249
  gene symbol: CALCR
  hgvsc: ENST00000360249.4:c.846C>T
  hgvsp: ENST00000360249.4:c.846C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000413179
  ensembl transcript: ENST00000415529
  gene symbol: CALCR
  hgvsc: ENST00000415529.1:c.798C>T
  hgvsp: ENST00000415529.1:c.798C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000399552
  ensembl transcript: ENST00000421592
  gene symbol: CALCR
  hgvsc: ENST00000421592.1:c.846C>T
  hgvsp: ENST00000421592.1:c.846C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000389295
  ensembl transcript: ENST00000426151
  gene symbol: CALCR
  hgvsc: ENST00000426151.1:c.798C>T
  hgvsp: ENST00000426151.1:c.798C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/1440
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10167
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2353
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 867
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11519
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12401
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8465
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3905
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1454
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5997
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3120
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 535
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4355
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Gly300Gly
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
population: African
reference allele: G
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: QD

7-93072930-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93072930
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 93072930
    reference: chr 7
allele count: 6
allele frequency: 4.971496751955456e-5
allele num: 120688
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000377959
  ensembl transcript: ENST00000394441
  gene symbol: CALCR
  hgvsc: ENST00000394441.1:c.788A>G
  hgvsp: ENSP00000377959.1:p.Tyr263Cys
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000413179
  ensembl transcript: ENST00000415529
  gene symbol: CALCR
  hgvsc: ENST00000415529.1:c.788A>G
  hgvsp: ENSP00000413179.1:p.Tyr263Cys
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000391369
  ensembl transcript: ENST00000423724
  gene symbol: CALCR
  hgvsc: ENST00000423724.1:c.836A>G
  hgvsp: ENSP00000391369.1:p.Tyr279Cys
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000352561
  ensembl transcript: ENST00000359558
  gene symbol: CALCR
  hgvsc: ENST00000359558.2:c.890A>G
  hgvsp: ENSP00000352561.2:p.Tyr297Cys
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000389295
  ensembl transcript: ENST00000426151
  gene symbol: CALCR
  hgvsc: ENST00000426151.1:c.788A>G
  hgvsp: ENSP00000389295.1:p.Tyr263Cys
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000399552
  ensembl transcript: ENST00000421592
  gene symbol: CALCR
  hgvsc: ENST00000421592.1:c.836A>G
  hgvsp: ENSP00000399552.1:p.Tyr279Cys
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000353385
  ensembl transcript: ENST00000360249
  gene symbol: CALCR
  hgvsc: ENST00000360249.4:c.836A>G
  hgvsp: ENSP00000353385.4:p.Tyr279Cys
  variant of: http://identifiers.org/hgnc/1440
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2353
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12577
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5996
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10371
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11537
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3906
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8462
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1453
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17266
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 6377
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Tyr297Cys
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: MQ
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD

7-93072933-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93072933
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 93072933
    reference: chr 7
allele count: 1
allele frequency: 8.282670995742708e-6
allele num: 120734
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000352561
  ensembl transcript: ENST00000359558
  gene symbol: CALCR
  hgvsc: ENST00000359558.2:c.887A>G
  hgvsp: ENSP00000352561.2:p.Tyr296Cys
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000391369
  ensembl transcript: ENST00000423724
  gene symbol: CALCR
  hgvsc: ENST00000423724.1:c.833A>G
  hgvsp: ENSP00000391369.1:p.Tyr278Cys
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000413179
  ensembl transcript: ENST00000415529
  gene symbol: CALCR
  hgvsc: ENST00000415529.1:c.785A>G
  hgvsp: ENSP00000413179.1:p.Tyr262Cys
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000389295
  ensembl transcript: ENST00000426151
  gene symbol: CALCR
  hgvsc: ENST00000426151.1:c.785A>G
  hgvsp: ENSP00000389295.1:p.Tyr262Cys
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000377959
  ensembl transcript: ENST00000394441
  gene symbol: CALCR
  hgvsc: ENST00000394441.1:c.785A>G
  hgvsp: ENSP00000377959.1:p.Tyr262Cys
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000353385
  ensembl transcript: ENST00000360249
  gene symbol: CALCR
  hgvsc: ENST00000360249.4:c.833A>G
  hgvsp: ENSP00000353385.4:p.Tyr278Cys
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000399552
  ensembl transcript: ENST00000421592
  gene symbol: CALCR
  hgvsc: ENST00000421592.1:c.833A>G
  hgvsp: ENSP00000399552.1:p.Tyr278Cys
  variant of: http://identifiers.org/hgnc/1440
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5998
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3907
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11539
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10407
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12599
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8463
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2353
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1453
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 346
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2230
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4355
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Tyr296Cys
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum

7-93072935-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93072935
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 93072935
    reference: chr 7
allele count: 2
allele frequency: 1.656534199148542e-5
allele num: 120734
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000377959
  ensembl transcript: ENST00000394441
  gene symbol: CALCR
  hgvsc: ENST00000394441.1:c.783G>C
  hgvsp: ENSP00000377959.1:p.Trp261Cys
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000353385
  ensembl transcript: ENST00000360249
  gene symbol: CALCR
  hgvsc: ENST00000360249.4:c.831G>C
  hgvsp: ENSP00000353385.4:p.Trp277Cys
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000352561
  ensembl transcript: ENST00000359558
  gene symbol: CALCR
  hgvsc: ENST00000359558.2:c.885G>C
  hgvsp: ENSP00000352561.2:p.Trp295Cys
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000399552
  ensembl transcript: ENST00000421592
  gene symbol: CALCR
  hgvsc: ENST00000421592.1:c.831G>C
  hgvsp: ENSP00000399552.1:p.Trp277Cys
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000413179
  ensembl transcript: ENST00000415529
  gene symbol: CALCR
  hgvsc: ENST00000415529.1:c.783G>C
  hgvsp: ENSP00000413179.1:p.Trp261Cys
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000389295
  ensembl transcript: ENST00000426151
  gene symbol: CALCR
  hgvsc: ENST00000426151.1:c.783G>C
  hgvsp: ENSP00000389295.1:p.Trp261Cys
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000391369
  ensembl transcript: ENST00000423724
  gene symbol: CALCR
  hgvsc: ENST00000423724.1:c.831G>C
  hgvsp: ENSP00000391369.1:p.Trp277Cys
  variant of: http://identifiers.org/hgnc/1440
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10382
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11549
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6001
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2354
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12627
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3906
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8468
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1453
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 867
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3508
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 336
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Trp295Cys
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum

7-93072935-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93072935
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 93072935
    reference: chr 7
allele count: 1
allele frequency: 8.282670995742708e-6
allele num: 120734
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000352561
  ensembl transcript: ENST00000359558
  gene symbol: CALCR
  hgvsc: ENST00000359558.2:c.885G>A
  hgvsp: ENSP00000352561.2:p.Trp295Ter
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000389295
  ensembl transcript: ENST00000426151
  gene symbol: CALCR
  hgvsc: ENST00000426151.1:c.783G>A
  hgvsp: ENSP00000389295.1:p.Trp261Ter
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000399552
  ensembl transcript: ENST00000421592
  gene symbol: CALCR
  hgvsc: ENST00000421592.1:c.831G>A
  hgvsp: ENSP00000399552.1:p.Trp277Ter
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000377959
  ensembl transcript: ENST00000394441
  gene symbol: CALCR
  hgvsc: ENST00000394441.1:c.783G>A
  hgvsp: ENSP00000377959.1:p.Trp261Ter
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000391369
  ensembl transcript: ENST00000423724
  gene symbol: CALCR
  hgvsc: ENST00000423724.1:c.831G>A
  hgvsp: ENSP00000391369.1:p.Trp277Ter
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: stop_gained
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000413179
  ensembl transcript: ENST00000415529
  gene symbol: CALCR
  hgvsc: ENST00000415529.1:c.783G>A
  hgvsp: ENSP00000413179.1:p.Trp261Ter
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000353385
  ensembl transcript: ENST00000360249
  gene symbol: CALCR
  hgvsc: ENST00000360249.4:c.831G>A
  hgvsp: ENSP00000353385.4:p.Trp277Ter
  variant of: http://identifiers.org/hgnc/1440
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12627
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11549
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3906
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8468
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2354
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10382
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6001
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1453
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 867
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2228
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 336
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3128
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18172
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6380
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Trp295Ter
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

http://identifiers.org/exac.variant/7-93072936-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 93072936
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 93072936
    reference: chr 7
allele count: 1
allele frequency: 8.280613427842734e-6
allele num: 120764
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000413179
  ensembl transcript: ENST00000415529
  gene symbol: CALCR
  hgvsc: ENST00000415529.1:c.782G>T
  hgvsp: ENSP00000413179.1:p.Trp261Leu
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000389295
  ensembl transcript: ENST00000426151
  gene symbol: CALCR
  hgvsc: ENST00000426151.1:c.782G>T
  hgvsp: ENSP00000389295.1:p.Trp261Leu
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000377959
  ensembl transcript: ENST00000394441
  gene symbol: CALCR
  hgvsc: ENST00000394441.1:c.782G>T
  hgvsp: ENSP00000377959.1:p.Trp261Leu
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000353385
  ensembl transcript: ENST00000360249
  gene symbol: CALCR
  hgvsc: ENST00000360249.4:c.830G>T
  hgvsp: ENSP00000353385.4:p.Trp277Leu
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000352561
  ensembl transcript: ENST00000359558
  gene symbol: CALCR
  hgvsc: ENST00000359558.2:c.884G>T
  hgvsp: ENSP00000352561.2:p.Trp295Leu
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000399552
  ensembl transcript: ENST00000421592
  gene symbol: CALCR
  hgvsc: ENST00000421592.1:c.830G>T
  hgvsp: ENSP00000399552.1:p.Trp277Leu
  variant of: http://identifiers.org/hgnc/1440
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000004948
  ensembl protein: ENSP00000391369
  ensembl transcript: ENST00000423724
  gene symbol: CALCR
  hgvsc: ENST00000423724.1:c.830G>T
  hgvsp: ENSP00000391369.1:p.Trp277Leu
  variant of: http://identifiers.org/hgnc/1440
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10370
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2353
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6003
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12655
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11549
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1453
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8468
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3908
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4355
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6382
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Trp295Leu
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP

8-146157429-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 146157429
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 146157429
    reference: chr 8
allele count: 1
allele frequency: 8.237367996177861e-6
allele num: 121398
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000170631
  ensembl protein: ENSP00000378369
  ensembl transcript: ENST00000394909
  gene symbol: ZNF16
  hgvsc: ENST00000394909.2:c.744G>A
  hgvsp: ENST00000394909.2:c.744G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12947
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000170631
  ensembl protein: ENSP00000276816
  ensembl transcript: ENST00000276816
  gene symbol: ZNF16
  hgvsc: ENST00000276816.4:c.744G>A
  hgvsp: ENST00000276816.4:c.744G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/12947
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7640
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5475
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2298
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3992
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20340
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16231
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1310
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1739
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3883
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9514
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5101
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9391
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3609
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24752
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2542
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Gln248Gln
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8654
  num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: Latino
reference allele: C
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: QD

8-146157430-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 146157430
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 146157430
    reference: chr 8
allele count: 3
allele frequency: 2.471169686985173e-5
allele num: 121400
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170631
  ensembl protein: ENSP00000378369
  ensembl transcript: ENST00000394909
  gene symbol: ZNF16
  hgvsc: ENST00000394909.2:c.743A>G
  hgvsp: ENSP00000378369.2:p.Gln248Arg
  variant of: http://identifiers.org/hgnc/12947
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170631
  ensembl protein: ENSP00000276816
  ensembl transcript: ENST00000276816
  gene symbol: ZNF16
  hgvsc: ENST00000276816.4:c.743A>G
  hgvsp: ENSP00000276816.4:p.Gln248Arg
  variant of: http://identifiers.org/hgnc/12947
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20334
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3993
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16231
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5483
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7636
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2298
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1310
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3609
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24746
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1737
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9514
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9387
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3884
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2542
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5102
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Gln248Arg
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6614
  num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: South Asian
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP

8-146157437-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 146157437
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 146157437
    reference: chr 8
allele count: 2
allele frequency: 1.647500741375333e-5
allele num: 121396
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170631
  ensembl protein: ENSP00000276816
  ensembl transcript: ENST00000276816
  gene symbol: ZNF16
  hgvsc: ENST00000276816.4:c.736T>C
  hgvsp: ENSP00000276816.4:p.Phe246Leu
  variant of: http://identifiers.org/hgnc/12947
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170631
  ensembl protein: ENSP00000378369
  ensembl transcript: ENST00000394909
  gene symbol: ZNF16
  hgvsc: ENST00000394909.2:c.736T>C
  hgvsp: ENSP00000378369.2:p.Phe246Leu
  variant of: http://identifiers.org/hgnc/12947
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7633
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3993
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5476
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2298
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16227
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1310
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.5e0
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genotype quality: GenotypeQuality
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  bin: 9.75e1
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 9.25e1
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genotype quality: GenotypeQuality
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  bin: 8.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 51
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24722
  bin: 6.25e1
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genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.75e1
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genotype quality: GenotypeQuality
  all individuals: 9383
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3884
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Phe246Leu
num of homozygotes: 0
population: African
  type: Population
  allele count: 2
  allele frequency: 1.923816852635629e-4
  allele num: 10396
  num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
population: Latino
reference allele: A
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD

8-146157458-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 146157458
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 146157458
    reference: chr 8
allele count: 1
allele frequency: 8.239811473113496e-6
allele num: 121362
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170631
  ensembl protein: ENSP00000378369
  ensembl transcript: ENST00000394909
  gene symbol: ZNF16
  hgvsc: ENST00000394909.2:c.715T>C
  hgvsp: ENSP00000378369.2:p.Cys239Arg
  variant of: http://identifiers.org/hgnc/12947
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170631
  ensembl protein: ENSP00000276816
  ensembl transcript: ENST00000276816
  gene symbol: ZNF16
  hgvsc: ENST00000276816.4:c.715T>C
  hgvsp: ENSP00000276816.4:p.Cys239Arg
  variant of: http://identifiers.org/hgnc/12947
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16175
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20247
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5508
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 1311
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7622
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2297
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9514
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 38
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Cys239Arg
num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 908
  num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/8-146157459-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 146157459
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 146157459
    reference: chr 8
allele count: 356
allele frequency: 2.933372884428404e-3
allele num: 121362
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170631
  ensembl protein: ENSP00000276816
  ensembl transcript: ENST00000276816
  gene symbol: ZNF16
  hgvsc: ENST00000276816.4:c.714G>T
  hgvsp: ENSP00000276816.4:p.Met238Ile
  variant of: http://identifiers.org/hgnc/12947
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170631
  ensembl protein: ENSP00000378369
  ensembl transcript: ENST00000394909
  gene symbol: ZNF16
  hgvsc: ENST00000394909.2:c.714G>T
  hgvsp: ENSP00000378369.2:p.Met238Ile
  variant of: http://identifiers.org/hgnc/12947
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2270
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
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  variant carriers: 10
genotype depth: GenotypeDepth
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  bin: 5.75e1
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genotype depth: GenotypeDepth
  all individuals: 23
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
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genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 7601
  bin: 3.75e1
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genotype depth: GenotypeDepth
  all individuals: 16147
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
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  bin: 8.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 121
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genotype depth: GenotypeDepth
  all individuals: 3968
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genotype depth: GenotypeDepth
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  bin: 7.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 432
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  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 9.75e1
  variant carriers: 252
genotype depth: GenotypeDepth
  all individuals: 108
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20206
  bin: 2.75e1
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genotype depth: GenotypeDepth
  all individuals: 1290
  bin: 5.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 6.25e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 2
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genotype quality: GenotypeQuality
  all individuals: 50
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genotype quality: GenotypeQuality
  all individuals: 0
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 32
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 9668
  bin: 9.75e1
  variant carriers: 349
hgvs: p.Met238Ile
num of homozygotes: 7
population: South Asian
  type: Population
  allele count: 352
  allele frequency: 2.131782945736434e-2
  allele num: 16512
  num of homozygotes: 7
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: European (Finnish)
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum

8-146157466-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 146157466
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 146157466
    reference: chr 8
allele count: 2
allele frequency: 1.647962294622699e-5
allele num: 121362
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170631
  ensembl protein: ENSP00000378369
  ensembl transcript: ENST00000394909
  gene symbol: ZNF16
  hgvsc: ENST00000394909.2:c.707C>T
  hgvsp: ENSP00000378369.2:p.Ser236Phe
  variant of: http://identifiers.org/hgnc/12947
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170631
  ensembl protein: ENSP00000276816
  ensembl transcript: ENST00000276816
  gene symbol: ZNF16
  hgvsc: ENST00000276816.4:c.707C>T
  hgvsp: ENSP00000276816.4:p.Ser236Phe
  variant of: http://identifiers.org/hgnc/12947
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
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  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 5.25e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 7.75e1
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genotype depth: GenotypeDepth
  all individuals: 88
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2269
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 1.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 5.25e1
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genotype quality: GenotypeQuality
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  bin: 8.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 1.25e1
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genotype quality: GenotypeQuality
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  bin: 7.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 2.25e1
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genotype quality: GenotypeQuality
  all individuals: 70
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 4.75e1
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genotype quality: GenotypeQuality
  all individuals: 3883
  bin: 8.25e1
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genotype quality: GenotypeQuality
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  bin: 9.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 6.25e1
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genotype quality: GenotypeQuality
  all individuals: 3598
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9343
  bin: 9.75e1
  variant carriers: 2
hgvs: p.Ser236Phe
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8654
  num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
reference allele: G
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum

8-146157469-GCCTC-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 146157469
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 146157465
    reference: chr 8
allele count: 1
allele frequency: 8.240762105679534e-6
allele num: 121348
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000170631
  ensembl protein: ENSP00000276816
  ensembl transcript: ENST00000276816
  gene symbol: ZNF16
  hgvsc: ENST00000276816.4:c.700_703delGAGG
  hgvsp: ENSP00000276816.4:p.Glu234LeufsTer26
  variant of: http://identifiers.org/hgnc/12947
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000170631
  ensembl protein: ENSP00000378369
  ensembl transcript: ENST00000394909
  gene symbol: ZNF16
  hgvsc: ENST00000394909.2:c.700_703delGAGG
  hgvsp: ENSP00000378369.2:p.Glu234LeufsTer26
  variant of: http://identifiers.org/hgnc/12947
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2269
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5464
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7625
  bin: 3.75e1
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genotype depth: GenotypeDepth
  all individuals: 510
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1290
  bin: 5.25e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 426
  bin: 6.75e1
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  bin: 2.75e1
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genotype depth: GenotypeDepth
  all individuals: 806
  bin: 5.75e1
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genotype depth: GenotypeDepth
  all individuals: 116
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 30
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 24726
  bin: 6.25e1
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genotype quality: GenotypeQuality
  all individuals: 3883
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 3.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 9.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 103
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3599
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Glu234LeufsTer26
num of homozygotes: 0
population: Other
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 908
  num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
reference allele: GCCTC
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum

8-146157472-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 146157472
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 146157472
    reference: chr 8
allele count: 1
allele frequency: 8.241305422778968e-6
allele num: 121340
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170631
  ensembl protein: ENSP00000378369
  ensembl transcript: ENST00000394909
  gene symbol: ZNF16
  hgvsc: ENST00000394909.2:c.701A>G
  hgvsp: ENSP00000378369.2:p.Glu234Gly
  variant of: http://identifiers.org/hgnc/12947
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170631
  ensembl protein: ENSP00000276816
  ensembl transcript: ENST00000276816
  gene symbol: ZNF16
  hgvsc: ENST00000276816.4:c.701A>G
  hgvsp: ENSP00000276816.4:p.Glu234Gly
  variant of: http://identifiers.org/hgnc/12947
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3981
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7624
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1290
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2269
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
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genotype quality: GenotypeQuality
  all individuals: 44
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 24648
  bin: 6.25e1
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genotype quality: GenotypeQuality
  all individuals: 1736
  bin: 8.75e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 70
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2539
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Glu234Gly
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 16512
  num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: T
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: QD

8-146157475-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 146157475
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 146157475
    reference: chr 8
allele count: 2
allele frequency: 1.648396933981703e-5
allele num: 121330
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170631
  ensembl protein: ENSP00000378369
  ensembl transcript: ENST00000394909
  gene symbol: ZNF16
  hgvsc: ENST00000394909.2:c.698G>C
  hgvsp: ENSP00000378369.2:p.Gly233Ala
  variant of: http://identifiers.org/hgnc/12947
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170631
  ensembl protein: ENSP00000276816
  ensembl transcript: ENST00000276816
  gene symbol: ZNF16
  hgvsc: ENST00000276816.4:c.698G>C
  hgvsp: ENSP00000276816.4:p.Gly233Ala
  variant of: http://identifiers.org/hgnc/12947
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 3.25e1
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genotype depth: GenotypeDepth
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  bin: 7.5e0
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genotype depth: GenotypeDepth
  all individuals: 426
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3981
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1290
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 806
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
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genotype depth: GenotypeDepth
  all individuals: 2270
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 1.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 9342
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  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 5100
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Gly233Ala
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 8654
  num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum

8-146157475-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 146157475
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 146157475
    reference: chr 8
allele count: 11
allele frequency: 9.066183136899366e-5
allele num: 121330
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170631
  ensembl protein: ENSP00000276816
  ensembl transcript: ENST00000276816
  gene symbol: ZNF16
  hgvsc: ENST00000276816.4:c.698G>A
  hgvsp: ENSP00000276816.4:p.Gly233Glu
  variant of: http://identifiers.org/hgnc/12947
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170631
  ensembl protein: ENSP00000378369
  ensembl transcript: ENST00000394909
  gene symbol: ZNF16
  hgvsc: ENST00000394909.2:c.698G>A
  hgvsp: ENSP00000378369.2:p.Gly233Glu
  variant of: http://identifiers.org/hgnc/12947
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2270
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16190
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20287
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3981
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5495
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1290
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7623
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 9.75e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1736
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9366
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3596
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5100
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2539
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9342
  bin: 9.75e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3881
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24600
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Gly233Glu
num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 10
  allele frequency: 1.155535012710885e-3
  allele num: 8654
  num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum

8-146157481-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 146157481
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 146157481
    reference: chr 8
allele count: 1
allele frequency: 8.242120532770671e-6
allele num: 121328
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170631
  ensembl protein: ENSP00000276816
  ensembl transcript: ENST00000276816
  gene symbol: ZNF16
  hgvsc: ENST00000276816.4:c.692A>G
  hgvsp: ENSP00000276816.4:p.His231Arg
  variant of: http://identifiers.org/hgnc/12947
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170631
  ensembl protein: ENSP00000378369
  ensembl transcript: ENST00000394909
  gene symbol: ZNF16
  hgvsc: ENST00000394909.2:c.692A>G
  hgvsp: ENSP00000378369.2:p.His231Arg
  variant of: http://identifiers.org/hgnc/12947
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2272
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7624
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3983
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16165
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20285
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5517
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1290
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24605
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5092
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9354
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2540
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3882
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9332
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1738
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3594
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 3.75e1
  variant carriers: 0
hgvs: p.His231Arg
num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6614
  num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
reference allele: T
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum

8-146157491-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 146157491
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 146157491
    reference: chr 8
allele count: 4
allele frequency: 3.297011259293451e-5
allele num: 121322
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170631
  ensembl protein: ENSP00000276816
  ensembl transcript: ENST00000276816
  gene symbol: ZNF16
  hgvsc: ENST00000276816.4:c.682C>G
  hgvsp: ENSP00000276816.4:p.Gln228Glu
  variant of: http://identifiers.org/hgnc/12947
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170631
  ensembl protein: ENSP00000378369
  ensembl transcript: ENST00000394909
  gene symbol: ZNF16
  hgvsc: ENST00000394909.2:c.682C>G
  hgvsp: ENSP00000378369.2:p.Gln228Glu
  variant of: http://identifiers.org/hgnc/12947
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 16143
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20259
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7618
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5545
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2272
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1290
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3982
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9333
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9345
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1737
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3879
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5086
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2539
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3593
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24640
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Gln228Glu
num of homozygotes: 0
population: African
  type: Population
  allele count: 1
  allele frequency: 9.669309611293753e-5
  allele num: 10342
  num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff

8-146157493-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 146157493
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 146157493
    reference: chr 8
allele count: 140
allele frequency: 1.154144202074162e-3
allele num: 121302
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000170631
  ensembl protein: ENSP00000276816
  ensembl transcript: ENST00000276816
  gene symbol: ZNF16
  hgvsc: ENST00000276816.4:c.680G>A
  hgvsp: ENSP00000276816.4:p.Arg227His
  variant of: http://identifiers.org/hgnc/12947
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000170631
  ensembl protein: ENSP00000378369
  ensembl transcript: ENST00000394909
  gene symbol: ZNF16
  hgvsc: ENST00000394909.2:c.680G>A
  hgvsp: ENSP00000378369.2:p.Arg227His
  variant of: http://identifiers.org/hgnc/12947
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20250
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1285
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16139
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2259
  bin: 4.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7613
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5537
  bin: 2.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Arg227His
num of homozygotes: 1
reference allele: C

GenotypeQuality
all individuals: 1106
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8018
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 30
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2586
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1577
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3592
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502358703163967e-5
allele num: 66562
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.4e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.034e1

MQRankSum
type: SiteQuality
SIO_000300: -1.103e0

VQSLOD
type: SiteQuality
SIO_000300: -3.804e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.63e0

DP
type: SiteQuality
SIO_000300: 1.842792e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.78e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.58e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 47
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32971
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 172
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8019
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2586
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3592
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2731
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.004175804368072e-5
allele num: 66574
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.968e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.5e-1

QD
type: SiteQuality
SIO_000300: 1.23e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 1.027e0

VQSLOD
type: SiteQuality
SIO_000300: 3.63e0

DP
type: SiteQuality
SIO_000300: 1.843347e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.03e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.9e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -4.03e-1

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33029
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1580
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8017
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3592
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7694
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2731
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 1.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501997656883655e-5
allele num: 66578
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.892e1

MQRankSum
type: SiteQuality
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ClippingRankSum
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SIO_000300: 1.58e0

BaseQRankSum
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SIO_000300: -1.323e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.8e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.6e-2

FS
type: SiteQuality
SIO_000300: 1.3897e1

VQSLOD
type: SiteQuality
SIO_000300: -1.776e0

QD
type: SiteQuality
SIO_000300: 1.245e1

DP
type: SiteQuality
SIO_000300: 1.84378e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.92270717169775e-4
allele num: 10402
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66598
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

DP
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: 6.37e-1

QD
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SIO_000300: 1.344e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.39e0

MQRankSum
type: SiteQuality
SIO_000300: 1.79e0

VQSLOD
type: SiteQuality
SIO_000300: -2.118e-1

MQ
type: SiteQuality
SIO_000300: 5.883e1

FS
type: SiteQuality
SIO_000300: 2.325e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.620935154897056e-5
allele num: 10394
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

European (Non-Finnish)
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allele count: 3
allele frequency: 4.50355781067043e-5
allele num: 66614
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.062075654704171e-5
allele num: 16496
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.8e-2

ClippingRankSum
type: SiteQuality
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DP
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.94e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
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SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -4.82e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.9e0

QD
type: SiteQuality
SIO_000300: 1.09e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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variant carriers: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66606
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.619084263178146e-5
allele num: 10396
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.062075654704171e-5
allele num: 16496
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.242e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.08e-1

MQ
type: SiteQuality
SIO_000300: 5.938e1

VQSLOD
type: SiteQuality
SIO_000300: 8.69e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.18e-1

FS
type: SiteQuality
SIO_000300: 1.739e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

DP
type: SiteQuality
SIO_000300: 1.845035e6

MQRankSum
type: SiteQuality
SIO_000300: 7.4e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.699999999999999e-3

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.501501501501501e-5
allele num: 66600
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.84e0

FS
type: SiteQuality
SIO_000300: 6.39e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.19e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 4.32e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.6e-1

DP
type: SiteQuality
SIO_000300: 1.845071e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.001e0

QD
type: SiteQuality
SIO_000300: 1.109e1

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.063545961678389e-5
allele num: 16492
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66600
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.6e-1

VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
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DP
type: SiteQuality
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FS
type: SiteQuality
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MQRankSum
type: SiteQuality
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QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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BaseQRankSum
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

South Asian
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allele frequency: 6.063545961678389e-5
allele num: 16492
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66594
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6604
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MQRankSum
type: SiteQuality
SIO_000300: 9.52e-1

DP
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VQSLOD
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QD
type: SiteQuality
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BaseQRankSum
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FS
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16488
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.003453972067878e-5
allele num: 66590
num of homozygotes: 0

East Asian
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ReadPosRankSum
type: SiteQuality
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MQRankSum
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MQ
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FS
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VQSLOD
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InbreedingCoeff
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ClippingRankSum
type: SiteQuality
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QD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
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allele num: 8634
num of homozygotes: 0

Latino
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allele frequency: 8.665511265164645e-5
allele num: 11540
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Other
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South Asian
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European (Non-Finnish)
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African
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European (Finnish)
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QD
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FS
type: SiteQuality
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InbreedingCoeff
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BaseQRankSum
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ReadPosRankSum
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MQRankSum
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VQSLOD
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ClippingRankSum
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MQ
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DP
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

African
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Latino
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European (Non-Finnish)
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allele num: 66580
num of homozygotes: 0

European (Finnish)
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Other
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East Asian
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MQ
type: SiteQuality
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QD
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VQSLOD
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FS
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InbreedingCoeff
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MQRankSum
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DP
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BaseQRankSum
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ReadPosRankSum
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ClippingRankSum
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32896
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16482
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10388
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.668515950069348e-5
allele num: 11536
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.848e1

VQSLOD
type: SiteQuality
SIO_000300: -4.262e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.4e-2

QD
type: SiteQuality
SIO_000300: 1.225e1

FS
type: SiteQuality
SIO_000300: 2.134e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.47e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.85e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.03e-1

DP
type: SiteQuality
SIO_000300: 1.843506e6

GenotypeQuality
all individuals: 21
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2584
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 271
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
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GenotypeQuality
all individuals: 3584
bin: 7.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1576
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variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 2.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16480
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.502403846153846e-5
allele num: 66560
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.07e0

VQSLOD
type: SiteQuality
SIO_000300: -3.041e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.69e-1

DP
type: SiteQuality
SIO_000300: 1.842887e6

QD
type: SiteQuality
SIO_000300: 1.64e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.07e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.69e0

MQ
type: SiteQuality
SIO_000300: 5.982e1

GenotypeQuality
all individuals: 32563
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2702
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 8
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variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 89
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7639
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.50407604608489e-5
allele num: 66486
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10346
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16454
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11520
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.1e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.2e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.092e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.6e-1

MQRankSum
type: SiteQuality
SIO_000300: -8.6e-1

FS
type: SiteQuality
SIO_000300: 8.2e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.3e-3

DP
type: SiteQuality
SIO_000300: 1.839916e6

QD
type: SiteQuality
SIO_000300: 9.32e0

MQ
type: SiteQuality
SIO_000300: 5.98e1

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1099
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GenotypeQuality
all individuals: 8018
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variant carriers: 6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 84
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3568
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variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 2.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10344
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.605071205279611e-4
allele num: 11516
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504302304591131e-5
allele num: 66476
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.21580547112462e-4
allele num: 16450
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.8e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.9e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -9.330000000000001e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.37e0

VQSLOD
type: SiteQuality
SIO_000300: 9.53e-1

QD
type: SiteQuality
SIO_000300: 1.269e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.31e0

DP
type: SiteQuality
SIO_000300: 1.839197e6

GenotypeQuality
all individuals: 125
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1099
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56
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variant carriers: 0

GenotypeQuality
all individuals: 23
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GenotypeQuality
all individuals: 10
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GenotypeQuality
all individuals: 7604
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3569
bin: 7.75e1
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GenotypeQuality
all individuals: 8014
bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10340
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11514
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66452
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.08198515995621e-5
allele num: 16442
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.839123e6

QD
type: SiteQuality
SIO_000300: 1.754e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.830000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.246e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.62e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-3

FS
type: SiteQuality
SIO_000300: 7.53e-1

MQ
type: SiteQuality
SIO_000300: 5.957e1

MQRankSum
type: SiteQuality
SIO_000300: -1.37e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.4e-1

GenotypeQuality
all individuals: 172
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 144
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variant carriers: 0

GenotypeQuality
all individuals: 24
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variant carriers: 0

GenotypeQuality
all individuals: 2569
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variant carriers: 0

GenotypeQuality
all individuals: 13
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variant carriers: 0

GenotypeQuality
all individuals: 3560
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variant carriers: 0

GenotypeQuality
all individuals: 9
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variant carriers: 0

GenotypeQuality
all individuals: 6
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variant carriers: 0

GenotypeQuality
all individuals: 66
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GenotypeQuality
all individuals: 7591
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variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 215
bin: 3.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16422
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.012774162448783e-5
allele num: 66384
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10328
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.34e0

MQRankSum
type: SiteQuality
SIO_000300: 7.35e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.633e0

QD
type: SiteQuality
SIO_000300: 1.088e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

FS
type: SiteQuality
SIO_000300: 4.568e0

DP
type: SiteQuality
SIO_000300: 1.834282e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.49e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.13e-1

MQ
type: SiteQuality
SIO_000300: 5.968e1

GenotypeQuality
all individuals: 1095
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 109
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variant carriers: 0

GenotypeQuality
all individuals: 12
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GenotypeQuality
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GenotypeQuality
all individuals: 80
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
all individuals: 274
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7560
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8012
bin: 9.75e1
variant carriers: 9

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11488
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

African
type: Population
allele count: 8
allele frequency: 7.754943776657619e-4
allele num: 10316
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16414
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.507431637975218e-5
allele num: 66338
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 3.7e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.91e0

DP
type: SiteQuality
SIO_000300: 1.830694e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.89e-1

FS
type: SiteQuality
SIO_000300: 1.18e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.8e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 3.93e-1

QD
type: SiteQuality
SIO_000300: 1.419e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.68e0

GenotypeQuality
all individuals: 1019
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1185
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1459
bin: 9.25e1
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GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
all individuals: 23
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3367
bin: 7.75e1
variant carriers: 3

GenotypeQuality
all individuals: 2547
bin: 7.25e1
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GenotypeQuality
all individuals: 118
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 180
bin: 5.25e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 1561
allele frequency: 2.359503007950664e-2
allele num: 66158
num of homozygotes: 21

East Asian
type: Population
allele count: 1
allele frequency: 1.164686699277894e-4
allele num: 8586
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 111
allele frequency: 1.687956204379562e-2
allele num: 6576
num of homozygotes: 1

Latino
type: Population
allele count: 89
allele frequency: 7.764787995114291e-3
allele num: 11462
num of homozygotes: 0

Other
type: Population
allele count: 20
allele frequency: 2.207505518763797e-2
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 39
allele frequency: 3.79156134551818e-3
allele num: 10286
num of homozygotes: 0

South Asian
type: Population
allele count: 478
allele frequency: 2.918905715681485e-2
allele num: 16376
num of homozygotes: 10

MQ
type: SiteQuality
SIO_000300: 5.982e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.64e-1

QD
type: SiteQuality
SIO_000300: 1.316e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.855e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 6.16e0

DP
type: SiteQuality
SIO_000300: 1.870695e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.46e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.76e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.26e-1

GenotypeQuality
all individuals: 436
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 699
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variant carriers: 0

GenotypeQuality
all individuals: 29521
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1459
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10286
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16376
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.511532996765319e-5
allele num: 66158
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11462
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8586
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 6.16e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.76e-1

DP
type: SiteQuality
SIO_000300: 1.870695e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.855e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.64e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.26e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.46e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.982e1

QD
type: SiteQuality
SIO_000300: 1.316e1

GenotypeQuality
all individuals: 3495
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 729
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7449
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1075
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 172
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2650
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1530
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1238
bin: 2.25e1
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GenotypeQuality
all individuals: 2541
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7813
bin: 9.75e1
variant carriers: 32

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8588
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6574
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10284
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.512127260630255e-5
allele num: 66132
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11466
num of homozygotes: 0

South Asian
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allele count: 31
allele frequency: 1.893939393939394e-3
allele num: 16368
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.2e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.257e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.165e1

VQSLOD
type: SiteQuality
SIO_000300: 2.99e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.73e-1

DP
type: SiteQuality
SIO_000300: 1.822364e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.65e-1

GenotypeQuality
all individuals: 65
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1356
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7309
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 1
allele frequency: 1.103752759381898e-3
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10274
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66032
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16350
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6574
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.741258741258741e-5
allele num: 11440
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8580
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.1e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.11e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

DP
type: SiteQuality
SIO_000300: 1.800043e6

QD
type: SiteQuality
SIO_000300: 1.108e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.331e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 2.26e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.370000000000001e-1

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1532
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GenotypeQuality
all individuals: 990
bin: 2.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10264
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11438
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.515840533575868e-5
allele num: 65970
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6572
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8570
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16334
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.01e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.350000000000001e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.945e1

DP
type: SiteQuality
SIO_000300: 1.789103e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -4.599e0

QD
type: SiteQuality
SIO_000300: 1.139e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.19e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.090000000000001e-1

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2518
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8560
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.838460595661233e-4
allele num: 16318
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10250
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65910
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6566
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11430
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.61e-1

FS
type: SiteQuality
SIO_000300: 1.267e0

QD
type: SiteQuality
SIO_000300: 1.364e1

MQRankSum
type: SiteQuality
SIO_000300: -6.98e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 7.49e-1

DP
type: SiteQuality
SIO_000300: 1.771348e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.37e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.77e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

GenotypeQuality
all individuals: 2527
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 197
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variant carriers: 0

GenotypeQuality
all individuals: 52
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 6583
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2199
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GenotypeQuality
all individuals: 1529
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6570
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10246
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.518003521768171e-5
allele num: 65876
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11424
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16310
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8556
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.654e1

VQSLOD
type: SiteQuality
SIO_000300: 2.83e0

MQ
type: SiteQuality
SIO_000300: 5.954e1

DP
type: SiteQuality
SIO_000300: 1.769277e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 7.93e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.7e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.02e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.64e-1

GenotypeQuality
all individuals: 2491
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 58
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variant carriers: 0

GenotypeQuality
all individuals: 1324
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 66
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variant carriers: 0

GenotypeQuality
all individuals: 1531
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 495
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variant carriers: 0

GenotypeQuality
all individuals: 3392
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.130456105934282e-5
allele num: 16312
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65872
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10240
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11426
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8556
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 8.72e-1

FS
type: SiteQuality
SIO_000300: 5.687e0

QD
type: SiteQuality
SIO_000300: 1.276e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.36e-1

DP
type: SiteQuality
SIO_000300: 1.757089e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.68e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.22e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.7e-3

MQRankSum
type: SiteQuality
SIO_000300: 6.66e-1

GenotypeQuality
all individuals: 93
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2481
bin: 3.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8556
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10240
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.518095700752976e-5
allele num: 65872
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16312
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11426
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6568
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.22e-1

FS
type: SiteQuality
SIO_000300: 5.687e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 8.72e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.66e-1

QD
type: SiteQuality
SIO_000300: 1.276e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.68e0

DP
type: SiteQuality
SIO_000300: 1.757089e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.7e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -8.36e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16226
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6546
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8496
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.526577718071627e-5
allele num: 65506
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.791981712678038e-5
allele num: 11374
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.3e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -5.21e-1

DP
type: SiteQuality
SIO_000300: 1.719265e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.34e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.98e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.03e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.14e-1

FS
type: SiteQuality
SIO_000300: 3.082e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.37e1

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2292
bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.05399462496946e-5
allele num: 65488
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16204
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.813542688910697e-5
allele num: 10190
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8508
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11372
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6546
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.03e-1

BaseQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 7.99e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.37e-1

ClippingRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.512e0

DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-3

QD
type: SiteQuality
SIO_000300: 1.725e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 861
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variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.31578947368421e-4
allele num: 7600
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 130
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3576
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 556
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 186
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.931e1

QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 3.73e-1

InbreedingCoeff
type: SiteQuality
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DP
type: SiteQuality
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MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -5.679999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.833e0

GenotypeQuality
all individuals: 294
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variant carriers: 0

GenotypeQuality
all individuals: 387
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GenotypeQuality
all individuals: 51
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7606
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 130
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 556
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3576
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 5.319148936170213e-3
allele num: 188
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.3e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.97e-2

QD
type: SiteQuality
SIO_000300: 5.65e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.133e5

MQ
type: SiteQuality
SIO_000300: 5.412e1

MQRankSum
type: SiteQuality
SIO_000300: -4.478e0

BaseQRankSum
type: SiteQuality
SIO_000300: 9.03e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.13e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.4e-1

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 556
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 130
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 5.319148936170213e-3
allele num: 188
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 198
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 3578
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 7608
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.13599e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.84e-1

MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.412e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.61e0

VQSLOD
type: SiteQuality
SIO_000300: -6.907e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.84e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -5.84e-1

QD
type: SiteQuality
SIO_000300: 1.26e0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 3576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 556
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 188
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 130
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.315443304393581e-4
allele num: 7602
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.27e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.9e-2

VQSLOD
type: SiteQuality
SIO_000300: 7.55e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.79e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.68e-1

MQ
type: SiteQuality
SIO_000300: 5.986e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.055e0

MQRankSum
type: SiteQuality
SIO_000300: 8.9e-2

QD
type: SiteQuality
SIO_000300: 1.257e1

DP
type: SiteQuality
SIO_000300: 2.14309e5

GenotypeQuality
all individuals: 20
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7608
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 198
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 130
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 188
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 556
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.791736460078169e-4
allele num: 3582
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.63e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.74e-1

FS
type: SiteQuality
SIO_000300: 2.969e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.444e0

MQRankSum
type: SiteQuality
SIO_000300: 7.81e-1

MQ
type: SiteQuality
SIO_000300: 5.945e1

DP
type: SiteQuality
SIO_000300: 2.14434e5

BaseQRankSum
type: SiteQuality
SIO_000300: -1.402e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.77e-2

QD
type: SiteQuality
SIO_000300: 1.341e1

GenotypeQuality
all individuals: 396
bin: 2.5e0
variant carriers: 4

GenotypeQuality
all individuals: 22
bin: 5.75e1
variant carriers: 10

GenotypeQuality
all individuals: 28
bin: 3.25e1
variant carriers: 9

GenotypeQuality
all individuals: 16
bin: 4.25e1
variant carriers: 1

GenotypeQuality
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bin: 8.75e1
variant carriers: 11

GenotypeQuality
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bin: 9.25e1
variant carriers: 6

GenotypeQuality
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variant carriers: 12

GenotypeQuality
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bin: 6.25e1
variant carriers: 13

GenotypeQuality
all individuals: 20
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variant carriers: 0

GenotypeQuality
all individuals: 278
bin: 7.75e1
variant carriers: 12

East Asian
type: Population
allele count: 5
allele frequency: 2.525252525252525e-2
allele num: 198
num of homozygotes: 0

African
type: Population
allele count: 99
allele frequency: 1.793478260869565e-1
allele num: 552
num of homozygotes: 8

Latino
type: Population
allele count: 33
allele frequency: 1.774193548387097e-1
allele num: 186
num of homozygotes: 2

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

South Asian
type: Population
allele count: 1471
allele frequency: 1.934508153603367e-1
allele num: 7604
num of homozygotes: 166

European (Non-Finnish)
type: Population
allele count: 1040
allele frequency: 2.898550724637681e-1
allele num: 3588
num of homozygotes: 133

Other
type: Population
allele count: 23
allele frequency: 1.742424242424243e-1
allele num: 132
num of homozygotes: 2

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.4e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -3.67e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.40459e5

VQSLOD
type: SiteQuality
SIO_000300: 5.94e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.91e-2

QD
type: SiteQuality
SIO_000300: 1.526e1

MQRankSum
type: SiteQuality
SIO_000300: 1.22e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.75e-1

GenotypeQuality
all individuals: 138
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 363
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 9
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GenotypeQuality
all individuals: 380
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variant carriers: 4

GenotypeQuality
all individuals: 9
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variant carriers: 0

GenotypeQuality
all individuals: 3210
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 198
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 188
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 132
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 554
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 1.111111111111111e-3
allele num: 3600
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.28e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.9e-2

MQ
type: SiteQuality
SIO_000300: 5.928e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.6e-2

MQRankSum
type: SiteQuality
SIO_000300: -4.08e-1

FS
type: SiteQuality
SIO_000300: 2.792e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.4e-2

DP
type: SiteQuality
SIO_000300: 2.38715e5

BaseQRankSum
type: SiteQuality
SIO_000300: -1.708e0

QD
type: SiteQuality
SIO_000300: 1.077e1

GenotypeQuality
all individuals: 112
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 2.5e0
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GenotypeQuality
all individuals: 108
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GenotypeQuality
all individuals: 364
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GenotypeQuality
all individuals: 3214
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 6
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variant carriers: 0

GenotypeQuality
all individuals: 7
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 198
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 556
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 132
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 188
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 1.110494169905608e-3
allele num: 3602
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.792e0

MQRankSum
type: SiteQuality
SIO_000300: -6.8e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.51e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -5.06e-1

DP
type: SiteQuality
SIO_000300: 2.38687e5

BaseQRankSum
type: SiteQuality
SIO_000300: -2.15e0

VQSLOD
type: SiteQuality
SIO_000300: 6.840000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.077e1

MQ
type: SiteQuality
SIO_000300: 5.997e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.09e-1

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1
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GenotypeQuality
all individuals: 126
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 5
allele frequency: 6.57030223390276e-4
allele num: 7610
num of homozygotes: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 186
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.783964365256125e-4
allele num: 3592
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 5.050505050505051e-3
allele num: 198
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 7.575757575757576e-3
allele num: 132
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 550
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ReadPosRankSum
type: SiteQuality
SIO_000300: 3.63e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.83e0

MQRankSum
type: SiteQuality
SIO_000300: -4.67e-1

FS
type: SiteQuality
SIO_000300: 1.285e0

VQSLOD
type: SiteQuality
SIO_000300: 2.02e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.32e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.194e0

DP
type: SiteQuality
SIO_000300: 2.36947e5

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 99
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GenotypeQuality
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GenotypeQuality
all individuals: 195
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GenotypeQuality
all individuals: 373
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GenotypeQuality
all individuals: 6
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GenotypeQuality
all individuals: 3
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GenotypeQuality
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GenotypeQuality
all individuals: 9
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GenotypeQuality
all individuals: 68
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GenotypeQuality
all individuals: 5
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variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.314751511964239e-4
allele num: 7606
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 534
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 186
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 194
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 132
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3560
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.31e-1

MQ
type: SiteQuality
SIO_000300: 5.504e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.44e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.8e-3

QD
type: SiteQuality
SIO_000300: 5.12e0

VQSLOD
type: SiteQuality
SIO_000300: 8.25e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.023e0

FS
type: SiteQuality
SIO_000300: 1.694e0

DP
type: SiteQuality
SIO_000300: 2.39509e5

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.19e-1

GenotypeQuality
all individuals: 177
bin: 1.25e1
variant carriers: 128

GenotypeQuality
all individuals: 120
bin: 3.25e1
variant carriers: 90

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
all individuals: 3925
bin: 9.75e1
variant carriers: 3100

GenotypeQuality
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GenotypeQuality
all individuals: 113
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GenotypeQuality
all individuals: 170
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GenotypeQuality
all individuals: 536
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variant carriers: 194

GenotypeQuality
all individuals: 175
bin: 1.75e1
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GenotypeQuality
all individuals: 130
bin: 3.75e1
variant carriers: 95

Other
type: Population
allele count: 61
allele frequency: 5.083333333333333e-1
allele num: 120
num of homozygotes: 14

East Asian
type: Population
allele count: 78
allele frequency: 4.193548387096774e-1
allele num: 186
num of homozygotes: 14

African
type: Population
allele count: 275
allele frequency: 5.522088353413654e-1
allele num: 498
num of homozygotes: 63

European (Non-Finnish)
type: Population
allele count: 1585
allele frequency: 4.968652037617555e-1
allele num: 3190
num of homozygotes: 290

Latino
type: Population
allele count: 74
allele frequency: 4.302325581395349e-1
allele num: 172
num of homozygotes: 11

European (Finnish)
type: Population
allele count: 1
allele frequency: 5.0e-1
allele num: 2
num of homozygotes: 0

South Asian
type: Population
allele count: 3126
allele frequency: 4.595707144957366e-1
allele num: 6802
num of homozygotes: 555

BaseQRankSum
type: SiteQuality
SIO_000300: 6.13e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.9e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -4.89e-1

QD
type: SiteQuality
SIO_000300: 1.611e1

FS
type: SiteQuality
SIO_000300: 5.96e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.8e0

DP
type: SiteQuality
SIO_000300: 2.3021e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.86e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.586e-1

GenotypeQuality
all individuals: 113
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 186
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 172
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 498
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.470155836518671e-4
allele num: 6802
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 8.333333333333333e-3
allele num: 120
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3190
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.86e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.9e-2

QD
type: SiteQuality
SIO_000300: 1.611e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.89e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.586e-1

FS
type: SiteQuality
SIO_000300: 5.96e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.13e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.8e0

DP
type: SiteQuality
SIO_000300: 2.3021e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 170
bin: 2.25e1
variant carriers: 9

GenotypeQuality
all individuals: 130
bin: 3.75e1
variant carriers: 8

GenotypeQuality
all individuals: 177
bin: 1.25e1
variant carriers: 6

GenotypeQuality
all individuals: 92
bin: 6.75e1
variant carriers: 4

GenotypeQuality
all individuals: 115
bin: 5.75e1
variant carriers: 6

GenotypeQuality
all individuals: 64
bin: 8.25e1
variant carriers: 7

GenotypeQuality
all individuals: 70
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3925
bin: 9.75e1
variant carriers: 11

GenotypeQuality
all individuals: 71
bin: 7.75e1
variant carriers: 2

GenotypeQuality
all individuals: 135
bin: 4.75e1
variant carriers: 7

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 120
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.162790697674419e-2
allele num: 172
num of homozygotes: 0

South Asian
type: Population
allele count: 65
allele frequency: 9.556012937371362e-3
allele num: 6802
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 2.008032128514056e-3
allele num: 498
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 186
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 18
allele frequency: 5.642633228840125e-3
allele num: 3190
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.96e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.8e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.13e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.586e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.9e-2

DP
type: SiteQuality
SIO_000300: 2.3021e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.89e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.86e-1

QD
type: SiteQuality
SIO_000300: 1.611e1

GenotypeQuality
all individuals: 135
bin: 4.75e1
variant carriers: 12

GenotypeQuality
all individuals: 175
bin: 1.75e1
variant carriers: 11

GenotypeQuality
all individuals: 115
bin: 5.75e1
variant carriers: 16

GenotypeQuality
all individuals: 536
bin: 7.5e0
variant carriers: 37

GenotypeQuality
all individuals: 120
bin: 3.25e1
variant carriers: 13

GenotypeQuality
all individuals: 3925
bin: 9.75e1
variant carriers: 1819

GenotypeQuality
all individuals: 70
bin: 8.75e1
variant carriers: 20

GenotypeQuality
all individuals: 100
bin: 7.25e1
variant carriers: 24

GenotypeQuality
all individuals: 113
bin: 6.25e1
variant carriers: 18

GenotypeQuality
all individuals: 64
bin: 8.25e1
variant carriers: 12

European (Non-Finnish)
type: Population
allele count: 566
allele frequency: 1.774294670846395e-1
allele num: 3190
num of homozygotes: 49

Latino
type: Population
allele count: 27
allele frequency: 1.569767441860465e-1
allele num: 172
num of homozygotes: 2

African
type: Population
allele count: 82
allele frequency: 1.646586345381526e-1
allele num: 498
num of homozygotes: 7

South Asian
type: Population
allele count: 1482
allele frequency: 2.17877094972067e-1
allele num: 6802
num of homozygotes: 161

East Asian
type: Population
allele count: 89
allele frequency: 4.78494623655914e-1
allele num: 186
num of homozygotes: 20

Other
type: Population
allele count: 24
allele frequency: 2.0e-1
allele num: 120
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 1
allele frequency: 5.0e-1
allele num: 2
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.586e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.89e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.9e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.86e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.13e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.8e0

FS
type: SiteQuality
SIO_000300: 5.96e-1

DP
type: SiteQuality
SIO_000300: 2.3021e5

QD
type: SiteQuality
SIO_000300: 1.611e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 65
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 324
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 205
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 309
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3113
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1021
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 2.645502645502646e-4
allele num: 7560
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3454
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 514
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 132
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 162
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 192
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.15e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.28e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.898e-1

DP
type: SiteQuality
SIO_000300: 1.74403e5

FS
type: SiteQuality
SIO_000300: 1.969e0

MQ
type: SiteQuality
SIO_000300: 6.044e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.89e0

MQRankSum
type: SiteQuality
SIO_000300: 2.62e-1

QD
type: SiteQuality
SIO_000300: 1.254e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.14e-1

GenotypeQuality
all individuals: 47
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 159
bin: 9.75e1
variant carriers: 99

GenotypeQuality
all individuals: 57
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 199
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 281
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 261
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 942
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 153
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3388
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 6.329113924050633e-3
allele num: 158
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 188
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

South Asian
type: Population
allele count: 102
allele frequency: 1.365461847389558e-2
allele num: 7470
num of homozygotes: 2

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 132
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 3.28e0

QD
type: SiteQuality
SIO_000300: 1.382e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.55e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.46e-1

MQ
type: SiteQuality
SIO_000300: 5.955e1

DP
type: SiteQuality
SIO_000300: 1.70821e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.4e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 2.26e0

GenotypeQuality
all individuals: 58
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 219
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 23
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 279
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 979
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.920560747663551e-4
allele num: 3424
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 508
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 158
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 188
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 132
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7542
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.65951e5

QD
type: SiteQuality
SIO_000300: 1.139e1

MQRankSum
type: SiteQuality
SIO_000300: -2.61e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.73e-2

FS
type: SiteQuality
SIO_000300: 9.686e0

VQSLOD
type: SiteQuality
SIO_000300: -2.827e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.84e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.669e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.83e-1

MQ
type: SiteQuality
SIO_000300: 5.86e1

GenotypeQuality
all individuals: 341
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1355
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 141
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 438
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 182
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 215
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 621
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 730
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 126
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: NaN
allele num: 0
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 484
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 184
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3264
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 7.142857142857143e-3
allele num: 140
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.361e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.94e-2

MQ
type: SiteQuality
SIO_000300: 5.911e1

FS
type: SiteQuality
SIO_000300: 5.119e0

VQSLOD
type: SiteQuality
SIO_000300: -2.252e0

QD
type: SiteQuality
SIO_000300: 2.059e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.75e0

DP
type: SiteQuality
SIO_000300: 1.37505e5

ClippingRankSum
type: SiteQuality
SIO_000300: -2.5e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.28e-1

GenotypeQuality
all individuals: 1234
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 258
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1110
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11529
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4645
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1327
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3498
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3002
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11322
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10258
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.514692517418964e-4
allele num: 6602
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14328
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65498
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.187e0

FS
type: SiteQuality
SIO_000300: 2.582e0

VQSLOD
type: SiteQuality
SIO_000300: 2.2e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.06e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.1e-3

QD
type: SiteQuality
SIO_000300: 9.27e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.381e0

MQ
type: SiteQuality
SIO_000300: 5.883e1

MQRankSum
type: SiteQuality
SIO_000300: 1.15e-1

DP
type: SiteQuality
SIO_000300: 2.088175e6

GenotypeQuality
all individuals: 3035
bin: 7.25e1
variant carriers: 2

GenotypeQuality
all individuals: 92
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 396
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3487
bin: 9.25e1
variant carriers: 2

GenotypeQuality
all individuals: 5973
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2203
bin: 8.75e1
variant carriers: 2

GenotypeQuality
all individuals: 4281
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4661
bin: 7.75e1
variant carriers: 2

GenotypeQuality
all individuals: 93
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17419
bin: 9.75e1
variant carriers: 206

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

African
type: Population
allele count: 64
allele frequency: 6.235385814497272e-3
allele num: 10264
num of homozygotes: 2

South Asian
type: Population
allele count: 146
allele frequency: 1.001371742112483e-2
allele num: 14580
num of homozygotes: 3

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.525041176111755e-5
allele num: 65572
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8574
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 3.529827038475115e-4
allele num: 11332
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.383e0

DP
type: SiteQuality
SIO_000300: 2.105588e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.86e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.52e-1

QD
type: SiteQuality
SIO_000300: 1.278e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.7e-2

FS
type: SiteQuality
SIO_000300: 1.603e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 3.96e0

GenotypeQuality
all individuals: 1088
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 219
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 369
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4310
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1686
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4699
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 145
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17254
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 13865
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10270
num of homozygotes: 0

East Asian
type: Population
allele count: 5
allele frequency: 5.826147751106968e-4
allele num: 8582
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11338
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.523925632429137e-5
allele num: 65620
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.672e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.06e0

QD
type: SiteQuality
SIO_000300: 1.564e1

DP
type: SiteQuality
SIO_000300: 2.110711e6

MQ
type: SiteQuality
SIO_000300: 5.957e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.15e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.8e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.93e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.6e-1

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 17260
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 6077
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.042935824483462e-5
allele num: 65726
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8592
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11344
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10274
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14904
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.122751e6

MQRankSum
type: SiteQuality
SIO_000300: -4.65e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.4e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 2.05e0

FS
type: SiteQuality
SIO_000300: 4.679e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

MQ
type: SiteQuality
SIO_000300: 5.962e1

QD
type: SiteQuality
SIO_000300: 1.543e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.76e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.5e0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 3

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11388
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16040
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10302
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.533091568449683e-5
allele num: 66180
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.255e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 2.598e0

VQSLOD
type: SiteQuality
SIO_000300: 8.88e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 4.01e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.379999999999999e-1

DP
type: SiteQuality
SIO_000300: 2.15788e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.11e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.15e-1

GenotypeQuality
all individuals: 222
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 55
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4794
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.017683626048645e-5
allele num: 66276
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10312
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16178
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11398
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -8.568e0

MQ
type: SiteQuality
SIO_000300: 5.397e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.51e-1

DP
type: SiteQuality
SIO_000300: 2.160823e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.77e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.063e0

FS
type: SiteQuality
SIO_000300: 1.1967e1

QD
type: SiteQuality
SIO_000300: 2.39e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.37e-1

GenotypeQuality
all individuals: 18
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2225
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 3511
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 212
bin: 3.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11406
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.167509559639817e-5
allele num: 16214
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66274
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10308
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.21e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.345e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.7e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.38e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.8e-3

VQSLOD
type: SiteQuality
SIO_000300: -2.411e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 2.16147e6

QD
type: SiteQuality
SIO_000300: 2.9e1

GenotypeQuality
all individuals: 370
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4799
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3509
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18139
bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10324
num of homozygotes: 0

East Asian
type: Population
allele count: 6
allele frequency: 6.963788300835655e-4
allele num: 8616
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16426
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11418
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66392
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.966e1

FS
type: SiteQuality
SIO_000300: 1.241e0

DP
type: SiteQuality
SIO_000300: 2.167698e6

VQSLOD
type: SiteQuality
SIO_000300: 5.78e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.06e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 4.06e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.2e0

MQRankSum
type: SiteQuality
SIO_000300: 7.56e-1

QD
type: SiteQuality
SIO_000300: 1.547e1

GenotypeQuality
all individuals: 51
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3509
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11418
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10328
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.079766536964981e-5
allele num: 16448
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66412
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.97e1

MQRankSum
type: SiteQuality
SIO_000300: -7.099999999999999e-2

DP
type: SiteQuality
SIO_000300: 2.168237e6

QD
type: SiteQuality
SIO_000300: 1.172e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.67e-1

FS
type: SiteQuality
SIO_000300: 3.818e0

VQSLOD
type: SiteQuality
SIO_000300: 1.15e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.64e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.9e-1

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 2.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10330
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.321801718133271e-4
allele num: 8614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16442
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11414
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66422
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 6.26e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.14e-1

QD
type: SiteQuality
SIO_000300: 1.342e1

FS
type: SiteQuality
SIO_000300: 1.988e0

MQRankSum
type: SiteQuality
SIO_000300: 6.13e-1

MQ
type: SiteQuality
SIO_000300: 5.97e1

DP
type: SiteQuality
SIO_000300: 2.16893e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.28e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.38e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 11
bin: 1.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.160900859066636e-4
allele num: 8614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11414
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66422
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16442
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10330
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.13e-1

QD
type: SiteQuality
SIO_000300: 1.342e1

DP
type: SiteQuality
SIO_000300: 2.16893e6

MQ
type: SiteQuality
SIO_000300: 5.97e1

FS
type: SiteQuality
SIO_000300: 1.988e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.28e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.14e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.38e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 6.26e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2229
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 53
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 17260
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4792
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11424
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16444
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.680542110358181e-5
allele num: 10330
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66436
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.22e0

MQ
type: SiteQuality
SIO_000300: 5.982e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.16e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.85e-1

FS
type: SiteQuality
SIO_000300: 1.991e0

QD
type: SiteQuality
SIO_000300: 1.389e1

MQRankSum
type: SiteQuality
SIO_000300: 3.41e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.41e-1

DP
type: SiteQuality
SIO_000300: 2.168947e6

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66736
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.619084263178146e-5
allele num: 10396
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.043e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 8.26e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.58e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.691e0

MQRankSum
type: SiteQuality
SIO_000300: -4.97e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.070426e6

QD
type: SiteQuality
SIO_000300: 1.64e1

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.495190146543199e-5
allele num: 66738
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.23e0

FS
type: SiteQuality
SIO_000300: 3.188e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.135e0

QD
type: SiteQuality
SIO_000300: 1.266e1

MQ
type: SiteQuality
SIO_000300: 5.965e1

MQRankSum
type: SiteQuality
SIO_000300: 4.7e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.23e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.0e0

DP
type: SiteQuality
SIO_000300: 2.070592e6

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66734
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.070129e6

FS
type: SiteQuality
SIO_000300: 1.102e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -3.35e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.07e0

MQ
type: SiteQuality
SIO_000300: 5.95e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.11e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.03e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.68e-1

QD
type: SiteQuality
SIO_000300: 1.275e1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10364
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66732
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.01e-2

FS
type: SiteQuality
SIO_000300: 6.757e0

DP
type: SiteQuality
SIO_000300: 2.067953e6

QD
type: SiteQuality
SIO_000300: 1.355e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.04e0

MQ
type: SiteQuality
SIO_000300: 5.934e1

VQSLOD
type: SiteQuality
SIO_000300: -1.04e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.09e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.33e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.64e-1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66732
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 2.202643171806168e-3
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.648784253184099e-5
allele num: 10364
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.21e-1

DP
type: SiteQuality
SIO_000300: 2.094915e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.27e-2

VQSLOD
type: SiteQuality
SIO_000300: 6.06e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.75e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.974e1

MQRankSum
type: SiteQuality
SIO_000300: 3.56e-1

QD
type: SiteQuality
SIO_000300: 1.392e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.97e0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.727414061150458e-4
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66730
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10366
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.259e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.27e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.09e-2

VQSLOD
type: SiteQuality
SIO_000300: -4.469e-1

FS
type: SiteQuality
SIO_000300: 5.105e0

MQRankSum
type: SiteQuality
SIO_000300: 4.0e-1

MQ
type: SiteQuality
SIO_000300: 5.963e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.09e0

DP
type: SiteQuality
SIO_000300: 2.059051e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.547e0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10364
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498845888665727e-5
allele num: 66718
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.88e-1

MQ
type: SiteQuality
SIO_000300: 5.48e1

VQSLOD
type: SiteQuality
SIO_000300: 1.6e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.3e-3

DP
type: SiteQuality
SIO_000300: 2.058526e6

MQRankSum
type: SiteQuality
SIO_000300: -4.37e0

FS
type: SiteQuality
SIO_000300: 4.253e0

QD
type: SiteQuality
SIO_000300: 1.342e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.319e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.96e0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10356
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66718
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
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ReadPosRankSum
type: SiteQuality
SIO_000300: 7.18e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.12e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.093e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.5e0

DP
type: SiteQuality
SIO_000300: 2.057927e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.46e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.98e-2

MQ
type: SiteQuality
SIO_000300: 5.971e1

QD
type: SiteQuality
SIO_000300: 2.375e1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10352
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.997961386257345e-5
allele num: 66712
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.59e-1

MQ
type: SiteQuality
SIO_000300: 5.965e1

MQRankSum
type: SiteQuality
SIO_000300: 3.56e-1

FS
type: SiteQuality
SIO_000300: 5.39e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.716e0

VQSLOD
type: SiteQuality
SIO_000300: 4.14e0

DP
type: SiteQuality
SIO_000300: 2.057527e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.9e-3

QD
type: SiteQuality
SIO_000300: 1.305e1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.900000000000001e-2

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66712
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10352
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.101321585903084e-3
allele num: 908
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.900000000000001e-2

VQSLOD
type: SiteQuality
SIO_000300: 4.14e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.9e-3

FS
type: SiteQuality
SIO_000300: 5.39e-1

MQ
type: SiteQuality
SIO_000300: 5.965e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.716e0

QD
type: SiteQuality
SIO_000300: 1.305e1

MQRankSum
type: SiteQuality
SIO_000300: 3.56e-1

DP
type: SiteQuality
SIO_000300: 2.057527e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.59e-1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498890820792613e-5
allele num: 66716
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10346
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.619e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.8e-3

MQ
type: SiteQuality
SIO_000300: 5.965e1

MQRankSum
type: SiteQuality
SIO_000300: -9.66e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.44e0

FS
type: SiteQuality
SIO_000300: 7.955e0

DP
type: SiteQuality
SIO_000300: 2.055526e6

QD
type: SiteQuality
SIO_000300: 1.194e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.87e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.184e0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.496807266840543e-5
allele num: 66714
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.05e0

MQRankSum
type: SiteQuality
SIO_000300: 2.13e-1

DP
type: SiteQuality
SIO_000300: 2.054754e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.5e-2

MQ
type: SiteQuality
SIO_000300: 5.987e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.0e-2

QD
type: SiteQuality
SIO_000300: 1.404e1

VQSLOD
type: SiteQuality
SIO_000300: 4.3e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3