10-7621760-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7621760
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 7621760
    reference: chr 10
allele count: 1
allele frequency: 8.237910865804433e-6
allele num: 121390
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000476417
  gene symbol: ITIH5
  hgvsc: ENST00000476417.1:n.5919G>A
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000298441
  ensembl transcript: ENST00000298441
  gene symbol: ITIH5
  hgvsc: ENST00000298441.6:c.734G>A
  hgvsp: ENSP00000298441.6:p.Arg245Gln
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000434980
  gene symbol: ITIH5
  hgvsc: ENST00000434980.1:n.1001G>A
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380333
  ensembl transcript: ENST00000397146
  gene symbol: ITIH5
  hgvsc: ENST00000397146.2:c.1376G>A
  hgvsp: ENSP00000380333.2:p.Arg459Gln
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000256861
  ensembl transcript: ENST00000256861
  gene symbol: ITIH5
  hgvsc: ENST00000256861.6:c.1376G>A
  hgvsp: ENSP00000256861.6:p.Arg459Gln
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000387969
  ensembl transcript: ENST00000446830
  gene symbol: ITIH5
  hgvsc: ENST00000446830.2:c.722G>A
  hgvsp: ENSP00000387969.2:p.Arg241Gln
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000419386
  ensembl transcript: ENST00000461751
  gene symbol: ITIH5
  hgvsc: ENST00000461751.1:c.*462G>A
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380332
  ensembl transcript: ENST00000397145
  gene symbol: ITIH5
  hgvsc: ENST00000397145.2:c.1376G>A
  hgvsp: ENSP00000380332.2:p.Arg459Gln
  variant of: http://identifiers.org/hgnc/21449
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1899
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 678
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2500
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21366
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1524
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7539
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13136
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2355
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2777
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2533
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1277
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1904
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Arg459Gln
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS

10-7621761-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7621761
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 7621761
    reference: chr 10
allele count: 22
allele frequency: 1.812340390476975e-4
allele num: 121390
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380332
  ensembl transcript: ENST00000397145
  gene symbol: ITIH5
  hgvsc: ENST00000397145.2:c.1375C>T
  hgvsp: ENSP00000380332.2:p.Arg459Trp
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000434980
  gene symbol: ITIH5
  hgvsc: ENST00000434980.1:n.1000C>T
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000387969
  ensembl transcript: ENST00000446830
  gene symbol: ITIH5
  hgvsc: ENST00000446830.2:c.721C>T
  hgvsp: ENSP00000387969.2:p.Arg241Trp
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000298441
  ensembl transcript: ENST00000298441
  gene symbol: ITIH5
  hgvsc: ENST00000298441.6:c.733C>T
  hgvsp: ENSP00000298441.6:p.Arg245Trp
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000419386
  ensembl transcript: ENST00000461751
  gene symbol: ITIH5
  hgvsc: ENST00000461751.1:c.*461C>T
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000256861
  ensembl transcript: ENST00000256861
  gene symbol: ITIH5
  hgvsc: ENST00000256861.6:c.1375C>T
  hgvsp: ENSP00000256861.6:p.Arg459Trp
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000476417
  gene symbol: ITIH5
  hgvsc: ENST00000476417.1:n.5918C>T
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380333
  ensembl transcript: ENST00000397146
  gene symbol: ITIH5
  hgvsc: ENST00000397146.2:c.1375C>T
  hgvsp: ENSP00000380333.2:p.Arg459Trp
  variant of: http://identifiers.org/hgnc/21449
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1277
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21363
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2775
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2529
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1518
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7543
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2352
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 9.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 13136
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1898
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2498
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1250
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31195
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 987
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Arg459Trp
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: MQ

10-7621765-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7621765
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 7621765
    reference: chr 10
allele count: 1
allele frequency: 8.237639422047218e-6
allele num: 121394
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380333
  ensembl transcript: ENST00000397146
  gene symbol: ITIH5
  hgvsc: ENST00000397146.2:c.1371C>T
  hgvsp: ENST00000397146.2:c.1371C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000434980
  gene symbol: ITIH5
  hgvsc: ENST00000434980.1:n.996C>T
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000387969
  ensembl transcript: ENST00000446830
  gene symbol: ITIH5
  hgvsc: ENST00000446830.2:c.717C>T
  hgvsp: ENST00000446830.2:c.717C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380332
  ensembl transcript: ENST00000397145
  gene symbol: ITIH5
  hgvsc: ENST00000397145.2:c.1371C>T
  hgvsp: ENST00000397145.2:c.1371C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000476417
  gene symbol: ITIH5
  hgvsc: ENST00000476417.1:n.5914C>T
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000419386
  ensembl transcript: ENST00000461751
  gene symbol: ITIH5
  hgvsc: ENST00000461751.1:c.*457C>T
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000298441
  ensembl transcript: ENST00000298441
  gene symbol: ITIH5
  hgvsc: ENST00000298441.6:c.729C>T
  hgvsp: ENST00000298441.6:c.729C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000256861
  ensembl transcript: ENST00000256861
  gene symbol: ITIH5
  hgvsc: ENST00000256861.6:c.1371C>T
  hgvsp: ENST00000256861.6:c.1371C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1898
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2527
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 962
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2499
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2773
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1518
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 678
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13141
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21382
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7544
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2352
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1278
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2043
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Leu457Leu
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff

10-7621768-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7621768
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 7621768
    reference: chr 10
allele count: 4
allele frequency: 3.295055768818887e-5
allele num: 121394
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000476417
  gene symbol: ITIH5
  hgvsc: ENST00000476417.1:n.5911C>A
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380333
  ensembl transcript: ENST00000397146
  gene symbol: ITIH5
  hgvsc: ENST00000397146.2:c.1368C>A
  hgvsp: ENST00000397146.2:c.1368C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000298441
  ensembl transcript: ENST00000298441
  gene symbol: ITIH5
  hgvsc: ENST00000298441.6:c.726C>A
  hgvsp: ENST00000298441.6:c.726C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000256861
  ensembl transcript: ENST00000256861
  gene symbol: ITIH5
  hgvsc: ENST00000256861.6:c.1368C>A
  hgvsp: ENST00000256861.6:c.1368C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000419386
  ensembl transcript: ENST00000461751
  gene symbol: ITIH5
  hgvsc: ENST00000461751.1:c.*454C>A
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000387969
  ensembl transcript: ENST00000446830
  gene symbol: ITIH5
  hgvsc: ENST00000446830.2:c.714C>A
  hgvsp: ENST00000446830.2:c.714C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380332
  ensembl transcript: ENST00000397145
  gene symbol: ITIH5
  hgvsc: ENST00000397145.2:c.1368C>A
  hgvsp: ENST00000397145.2:c.1368C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000434980
  gene symbol: ITIH5
  hgvsc: ENST00000434980.1:n.993C>A
  variant of: http://identifiers.org/hgnc/21449
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 962
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1518
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2772
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2527
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2352
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 13137
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2499
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21387
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1899
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7544
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1276
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 587
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1251
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Gly456Gly
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: Latino
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff

10-7621771-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7621771
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 7621771
    reference: chr 10
allele count: 24021
allele frequency: 1.979089426071481e-1
allele num: 121374
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000256861
  ensembl transcript: ENST00000256861
  gene symbol: ITIH5
  hgvsc: ENST00000256861.6:c.1365T>C
  hgvsp: ENST00000256861.6:c.1365T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380333
  ensembl transcript: ENST00000397146
  gene symbol: ITIH5
  hgvsc: ENST00000397146.2:c.1365T>C
  hgvsp: ENST00000397146.2:c.1365T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000298441
  ensembl transcript: ENST00000298441
  gene symbol: ITIH5
  hgvsc: ENST00000298441.6:c.723T>C
  hgvsp: ENST00000298441.6:c.723T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000476417
  gene symbol: ITIH5
  hgvsc: ENST00000476417.1:n.5908T>C
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000387969
  ensembl transcript: ENST00000446830
  gene symbol: ITIH5
  hgvsc: ENST00000446830.2:c.711T>C
  hgvsp: ENST00000446830.2:c.711T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000419386
  ensembl transcript: ENST00000461751
  gene symbol: ITIH5
  hgvsc: ENST00000461751.1:c.*451T>C
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000434980
  gene symbol: ITIH5
  hgvsc: ENST00000434980.1:n.990T>C
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380332
  ensembl transcript: ENST00000397145
  gene symbol: ITIH5
  hgvsc: ENST00000397145.2:c.1365T>C
  hgvsp: ENST00000397145.2:c.1365T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1082
  bin: 3.75e1
  variant carriers: 153
genotype depth: GenotypeDepth
  all individuals: 6073
  bin: 3.25e1
  variant carriers: 108
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11412
  bin: 2.25e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 1316
  bin: 8.75e1
  variant carriers: 1293
genotype depth: GenotypeDepth
  all individuals: 11903
  bin: 9.75e1
  variant carriers: 11861
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 4.75e1
  variant carriers: 289
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 6.75e1
  variant carriers: 856
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 6.25e1
  variant carriers: 664
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 5.75e1
  variant carriers: 509
genotype depth: GenotypeDepth
  all individuals: 20087
  bin: 2.75e1
  variant carriers: 61
genotype depth: GenotypeDepth
  all individuals: 585
  bin: 4.25e1
  variant carriers: 242
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1132
  bin: 7.75e1
  variant carriers: 1099
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 5.25e1
  variant carriers: 405
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 1314
  bin: 8.25e1
  variant carriers: 1282
genotype depth: GenotypeDepth
  all individuals: 1037
  bin: 7.25e1
  variant carriers: 1000
genotype depth: GenotypeDepth
  all individuals: 1385
  bin: 9.25e1
  variant carriers: 1369
genotype quality: GenotypeQuality
  all individuals: 572
  bin: 8.25e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 8.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Cys455Cys
num of homozygotes: 2795
population: South Asian
population: Latino
population: European (Finnish)
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD

10-7621774-GTTCTCCAGCGACAGT-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7621774
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 7621759
    reference: chr 10
allele count: 4
allele frequency: 3.294838635277837e-5
allele num: 121402
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000419386
  ensembl transcript: ENST00000461751
  gene symbol: ITIH5
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380333
  ensembl transcript: ENST00000397146
  gene symbol: ITIH5
  hgvsp: ENSP00000380333.2:p.Lys449_Glu453del
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380332
  ensembl transcript: ENST00000397145
  gene symbol: ITIH5
  hgvsp: ENSP00000380332.2:p.Lys449_Glu453del
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000387969
  ensembl transcript: ENST00000446830
  gene symbol: ITIH5
  hgvsp: ENSP00000387969.2:p.Lys231_Glu235del
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000298441
  ensembl transcript: ENST00000298441
  gene symbol: ITIH5
  hgvsp: ENSP00000298441.6:p.Lys235_Glu239del
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000434980
  gene symbol: ITIH5
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000476417
  gene symbol: ITIH5
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000256861
  ensembl transcript: ENST00000256861
  gene symbol: ITIH5
  hgvsp: ENSP00000256861.6:p.Lys449_Glu453del
  variant of: http://identifiers.org/hgnc/21449
canonical: true
consequence: inframe deletion
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 1694
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30785
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15688
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9797
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2372
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 1035
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43381
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Lys449_Glu453del
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
reference allele: GTTCTCCAGCGACAGT
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD

10-7621783-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7621783
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 7621783
    reference: chr 10
allele count: 1
allele frequency: 8.236960890909689e-6
allele num: 121404
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000419386
  ensembl transcript: ENST00000461751
  gene symbol: ITIH5
  hgvsc: ENST00000461751.1:c.*439G>A
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000256861
  ensembl transcript: ENST00000256861
  gene symbol: ITIH5
  hgvsc: ENST00000256861.6:c.1353G>A
  hgvsp: ENST00000256861.6:c.1353G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000476417
  gene symbol: ITIH5
  hgvsc: ENST00000476417.1:n.5896G>A
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000387969
  ensembl transcript: ENST00000446830
  gene symbol: ITIH5
  hgvsc: ENST00000446830.2:c.699G>A
  hgvsp: ENST00000446830.2:c.699G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380332
  ensembl transcript: ENST00000397145
  gene symbol: ITIH5
  hgvsc: ENST00000397145.2:c.1353G>A
  hgvsp: ENST00000397145.2:c.1353G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380333
  ensembl transcript: ENST00000397146
  gene symbol: ITIH5
  hgvsc: ENST00000397146.2:c.1353G>A
  hgvsp: ENST00000397146.2:c.1353G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000434980
  gene symbol: ITIH5
  hgvsc: ENST00000434980.1:n.978G>A
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000298441
  ensembl transcript: ENST00000298441
  gene symbol: ITIH5
  hgvsc: ENST00000298441.6:c.711G>A
  hgvsp: ENST00000298441.6:c.711G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9797
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15698
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1694
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30786
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2294
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1035
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Ser451Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: African
population: South Asian
population: East Asian
reference allele: C
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum

10-7621784-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7621784
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 7621784
    reference: chr 10
allele count: 5
allele frequency: 4.118548294097296e-5
allele num: 121402
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380333
  ensembl transcript: ENST00000397146
  gene symbol: ITIH5
  hgvsc: ENST00000397146.2:c.1352C>T
  hgvsp: ENSP00000380333.2:p.Ser451Leu
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000387969
  ensembl transcript: ENST00000446830
  gene symbol: ITIH5
  hgvsc: ENST00000446830.2:c.698C>T
  hgvsp: ENSP00000387969.2:p.Ser233Leu
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000419386
  ensembl transcript: ENST00000461751
  gene symbol: ITIH5
  hgvsc: ENST00000461751.1:c.*438C>T
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000256861
  ensembl transcript: ENST00000256861
  gene symbol: ITIH5
  hgvsc: ENST00000256861.6:c.1352C>T
  hgvsp: ENSP00000256861.6:p.Ser451Leu
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000476417
  gene symbol: ITIH5
  hgvsc: ENST00000476417.1:n.5895C>T
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380332
  ensembl transcript: ENST00000397145
  gene symbol: ITIH5
  hgvsc: ENST00000397145.2:c.1352C>T
  hgvsp: ENSP00000380332.2:p.Ser451Leu
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000298441
  ensembl transcript: ENST00000298441
  gene symbol: ITIH5
  hgvsc: ENST00000298441.6:c.710C>T
  hgvsp: ENSP00000298441.6:p.Ser237Leu
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000434980
  gene symbol: ITIH5
  hgvsc: ENST00000434980.1:n.977C>T
  variant of: http://identifiers.org/hgnc/21449
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9797
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15701
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30787
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1693
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1037
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2243
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 324
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ser451Leu
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: MQ

http://identifiers.org/exac.variant/10-7621787-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7621787
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 7621787
    reference: chr 10
allele count: 1
allele frequency: 8.237096588194593e-6
allele num: 121402
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000387969
  ensembl transcript: ENST00000446830
  gene symbol: ITIH5
  hgvsc: ENST00000446830.2:c.695T>G
  hgvsp: ENSP00000387969.2:p.Leu232Arg
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000298441
  ensembl transcript: ENST00000298441
  gene symbol: ITIH5
  hgvsc: ENST00000298441.6:c.707T>G
  hgvsp: ENSP00000298441.6:p.Leu236Arg
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000476417
  gene symbol: ITIH5
  hgvsc: ENST00000476417.1:n.5892T>G
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000419386
  ensembl transcript: ENST00000461751
  gene symbol: ITIH5
  hgvsc: ENST00000461751.1:c.*435T>G
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380333
  ensembl transcript: ENST00000397146
  gene symbol: ITIH5
  hgvsc: ENST00000397146.2:c.1349T>G
  hgvsp: ENSP00000380333.2:p.Leu450Arg
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000256861
  ensembl transcript: ENST00000256861
  gene symbol: ITIH5
  hgvsc: ENST00000256861.6:c.1349T>G
  hgvsp: ENSP00000256861.6:p.Leu450Arg
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000434980
  gene symbol: ITIH5
  hgvsc: ENST00000434980.1:n.974T>G
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380332
  ensembl transcript: ENST00000397145
  gene symbol: ITIH5
  hgvsc: ENST00000397145.2:c.1349T>G
  hgvsp: ENSP00000380332.2:p.Leu450Arg
  variant of: http://identifiers.org/hgnc/21449
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9794
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15699
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1695
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30793
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1036
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 412
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Leu450Arg
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
population: Latino
reference allele: A
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD

10-7621787-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7621787
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 7621787
    reference: chr 10
allele count: 1
allele frequency: 8.237096588194593e-6
allele num: 121402
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380332
  ensembl transcript: ENST00000397145
  gene symbol: ITIH5
  hgvsc: ENST00000397145.2:c.1349T>A
  hgvsp: ENSP00000380332.2:p.Leu450Gln
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380333
  ensembl transcript: ENST00000397146
  gene symbol: ITIH5
  hgvsc: ENST00000397146.2:c.1349T>A
  hgvsp: ENSP00000380333.2:p.Leu450Gln
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000476417
  gene symbol: ITIH5
  hgvsc: ENST00000476417.1:n.5892T>A
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000298441
  ensembl transcript: ENST00000298441
  gene symbol: ITIH5
  hgvsc: ENST00000298441.6:c.707T>A
  hgvsp: ENSP00000298441.6:p.Leu236Gln
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000387969
  ensembl transcript: ENST00000446830
  gene symbol: ITIH5
  hgvsc: ENST00000446830.2:c.695T>A
  hgvsp: ENSP00000387969.2:p.Leu232Gln
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000256861
  ensembl transcript: ENST00000256861
  gene symbol: ITIH5
  hgvsc: ENST00000256861.6:c.1349T>A
  hgvsp: ENSP00000256861.6:p.Leu450Gln
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000434980
  gene symbol: ITIH5
  hgvsc: ENST00000434980.1:n.974T>A
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000419386
  ensembl transcript: ENST00000461751
  gene symbol: ITIH5
  hgvsc: ENST00000461751.1:c.*435T>A
  variant of: http://identifiers.org/hgnc/21449
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15699
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1695
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9794
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30793
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 323
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2364
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 412
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Leu450Gln
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: A
site quality: FS
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum

10-7621808-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7621808
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 7621808
    reference: chr 10
allele count: 2
allele frequency: 1.647337901950448e-5
allele num: 121408
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000298441
  ensembl transcript: ENST00000298441
  gene symbol: ITIH5
  hgvsc: ENST00000298441.6:c.686A>T
  hgvsp: ENSP00000298441.6:p.Asp229Val
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000434980
  gene symbol: ITIH5
  hgvsc: ENST00000434980.1:n.953A>T
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000387969
  ensembl transcript: ENST00000446830
  gene symbol: ITIH5
  hgvsc: ENST00000446830.2:c.674A>T
  hgvsp: ENSP00000387969.2:p.Asp225Val
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000256861
  ensembl transcript: ENST00000256861
  gene symbol: ITIH5
  hgvsc: ENST00000256861.6:c.1328A>T
  hgvsp: ENSP00000256861.6:p.Asp443Val
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000476417
  gene symbol: ITIH5
  hgvsc: ENST00000476417.1:n.5871A>T
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000419386
  ensembl transcript: ENST00000461751
  gene symbol: ITIH5
  hgvsc: ENST00000461751.1:c.*414A>T
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380333
  ensembl transcript: ENST00000397146
  gene symbol: ITIH5
  hgvsc: ENST00000397146.2:c.1328A>T
  hgvsp: ENSP00000380333.2:p.Asp443Val
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380332
  ensembl transcript: ENST00000397145
  gene symbol: ITIH5
  hgvsc: ENST00000397145.2:c.1328A>T
  hgvsp: ENSP00000380332.2:p.Asp443Val
  variant of: http://identifiers.org/hgnc/21449
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15714
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30809
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1695
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9793
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Asp443Val
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
reference allele: T
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: QD

10-7621810-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7621810
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 7621810
    reference: chr 10
allele count: 1
allele frequency: 8.236553825879253e-6
allele num: 121410
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000476417
  gene symbol: ITIH5
  hgvsc: ENST00000476417.1:n.5869G>A
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000298441
  ensembl transcript: ENST00000298441
  gene symbol: ITIH5
  hgvsc: ENST00000298441.6:c.684G>A
  hgvsp: ENST00000298441.6:c.684G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000387969
  ensembl transcript: ENST00000446830
  gene symbol: ITIH5
  hgvsc: ENST00000446830.2:c.672G>A
  hgvsp: ENST00000446830.2:c.672G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380333
  ensembl transcript: ENST00000397146
  gene symbol: ITIH5
  hgvsc: ENST00000397146.2:c.1326G>A
  hgvsp: ENST00000397146.2:c.1326G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380332
  ensembl transcript: ENST00000397145
  gene symbol: ITIH5
  hgvsc: ENST00000397145.2:c.1326G>A
  hgvsp: ENST00000397145.2:c.1326G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000434980
  gene symbol: ITIH5
  hgvsc: ENST00000434980.1:n.951G>A
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000256861
  ensembl transcript: ENST00000256861
  gene symbol: ITIH5
  hgvsc: ENST00000256861.6:c.1326G>A
  hgvsp: ENST00000256861.6:c.1326G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000419386
  ensembl transcript: ENST00000461751
  gene symbol: ITIH5
  hgvsc: ENST00000461751.1:c.*412G>A
  variant of: http://identifiers.org/hgnc/21449
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1695
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9792
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30812
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15713
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8583
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2244
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43444
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2346
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Val442Val
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum

10-7621812-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7621812
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 7621812
    reference: chr 10
allele count: 1
allele frequency: 8.236689509752241e-6
allele num: 121408
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000387969
  ensembl transcript: ENST00000446830
  gene symbol: ITIH5
  hgvsc: ENST00000446830.2:c.670G>A
  hgvsp: ENSP00000387969.2:p.Val224Met
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000298441
  ensembl transcript: ENST00000298441
  gene symbol: ITIH5
  hgvsc: ENST00000298441.6:c.682G>A
  hgvsp: ENSP00000298441.6:p.Val228Met
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380332
  ensembl transcript: ENST00000397145
  gene symbol: ITIH5
  hgvsc: ENST00000397145.2:c.1324G>A
  hgvsp: ENSP00000380332.2:p.Val442Met
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000476417
  gene symbol: ITIH5
  hgvsc: ENST00000476417.1:n.5867G>A
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000434980
  gene symbol: ITIH5
  hgvsc: ENST00000434980.1:n.949G>A
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000419386
  ensembl transcript: ENST00000461751
  gene symbol: ITIH5
  hgvsc: ENST00000461751.1:c.*410G>A
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380333
  ensembl transcript: ENST00000397146
  gene symbol: ITIH5
  hgvsc: ENST00000397146.2:c.1324G>A
  hgvsp: ENSP00000380333.2:p.Val442Met
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000256861
  ensembl transcript: ENST00000256861
  gene symbol: ITIH5
  hgvsc: ENST00000256861.6:c.1324G>A
  hgvsp: ENSP00000256861.6:p.Val442Met
  variant of: http://identifiers.org/hgnc/21449
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9791
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15711
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30811
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1698
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43446
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2292
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2242
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Val442Met
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: DP

10-7621813-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7621813
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 7621813
    reference: chr 10
allele count: 1
allele frequency: 8.236689509752241e-6
allele num: 121408
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000256861
  ensembl transcript: ENST00000256861
  gene symbol: ITIH5
  hgvsc: ENST00000256861.6:c.1323C>T
  hgvsp: ENST00000256861.6:c.1323C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000434980
  gene symbol: ITIH5
  hgvsc: ENST00000434980.1:n.948C>T
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380333
  ensembl transcript: ENST00000397146
  gene symbol: ITIH5
  hgvsc: ENST00000397146.2:c.1323C>T
  hgvsp: ENST00000397146.2:c.1323C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380332
  ensembl transcript: ENST00000397145
  gene symbol: ITIH5
  hgvsc: ENST00000397145.2:c.1323C>T
  hgvsp: ENST00000397145.2:c.1323C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000419386
  ensembl transcript: ENST00000461751
  gene symbol: ITIH5
  hgvsc: ENST00000461751.1:c.*409C>T
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000387969
  ensembl transcript: ENST00000446830
  gene symbol: ITIH5
  hgvsc: ENST00000446830.2:c.669C>T
  hgvsp: ENST00000446830.2:c.669C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000476417
  gene symbol: ITIH5
  hgvsc: ENST00000476417.1:n.5866C>T
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000298441
  ensembl transcript: ENST00000298441
  gene symbol: ITIH5
  hgvsc: ENST00000298441.6:c.681C>T
  hgvsp: ENST00000298441.6:c.681C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9791
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1695
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15713
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30812
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 409
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2345
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43454
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Asp441Asp
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
population: Latino
population: South Asian
reference allele: G
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: MQRankSum

10-7621816-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7621816
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 7621816
    reference: chr 10
allele count: 19
allele frequency: 1.564996787638173e-4
allele num: 121406
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000434980
  gene symbol: ITIH5
  hgvsc: ENST00000434980.1:n.945C>T
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380332
  ensembl transcript: ENST00000397145
  gene symbol: ITIH5
  hgvsc: ENST00000397145.2:c.1320C>T
  hgvsp: ENST00000397145.2:c.1320C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380333
  ensembl transcript: ENST00000397146
  gene symbol: ITIH5
  hgvsc: ENST00000397146.2:c.1320C>T
  hgvsp: ENST00000397146.2:c.1320C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000419386
  ensembl transcript: ENST00000461751
  gene symbol: ITIH5
  hgvsc: ENST00000461751.1:c.*406C>T
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000298441
  ensembl transcript: ENST00000298441
  gene symbol: ITIH5
  hgvsc: ENST00000298441.6:c.678C>T
  hgvsp: ENST00000298441.6:c.678C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000387969
  ensembl transcript: ENST00000446830
  gene symbol: ITIH5
  hgvsc: ENST00000446830.2:c.666C>T
  hgvsp: ENST00000446830.2:c.666C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000256861
  ensembl transcript: ENST00000256861
  gene symbol: ITIH5
  hgvsc: ENST00000256861.6:c.1320C>T
  hgvsp: ENST00000256861.6:c.1320C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000476417
  gene symbol: ITIH5
  hgvsc: ENST00000476417.1:n.5863C>T
  variant of: http://identifiers.org/hgnc/21449
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30809
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1696
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9787
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15716
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 9.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1032
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43452
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2293
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Asn440Asn
num of homozygotes: 0
population: Latino
population: African
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: ClippingRankSum

10-7621817-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7621817
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 7621817
    reference: chr 10
allele count: 1
allele frequency: 8.236960890909689e-6
allele num: 121404
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380332
  ensembl transcript: ENST00000397145
  gene symbol: ITIH5
  hgvsc: ENST00000397145.2:c.1319A>G
  hgvsp: ENSP00000380332.2:p.Asn440Ser
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000256861
  ensembl transcript: ENST00000256861
  gene symbol: ITIH5
  hgvsc: ENST00000256861.6:c.1319A>G
  hgvsp: ENSP00000256861.6:p.Asn440Ser
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000298441
  ensembl transcript: ENST00000298441
  gene symbol: ITIH5
  hgvsc: ENST00000298441.6:c.677A>G
  hgvsp: ENSP00000298441.6:p.Asn226Ser
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000476417
  gene symbol: ITIH5
  hgvsc: ENST00000476417.1:n.5862A>G
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380333
  ensembl transcript: ENST00000397146
  gene symbol: ITIH5
  hgvsc: ENST00000397146.2:c.1319A>G
  hgvsp: ENSP00000380333.2:p.Asn440Ser
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000387969
  ensembl transcript: ENST00000446830
  gene symbol: ITIH5
  hgvsc: ENST00000446830.2:c.665A>G
  hgvsp: ENSP00000387969.2:p.Asn222Ser
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000434980
  gene symbol: ITIH5
  hgvsc: ENST00000434980.1:n.944A>G
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000419386
  ensembl transcript: ENST00000461751
  gene symbol: ITIH5
  hgvsc: ENST00000461751.1:c.*405A>G
  variant of: http://identifiers.org/hgnc/21449
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15723
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9792
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1697
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30816
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2243
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 319
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Asn440Ser
num of homozygotes: 0
population: Other
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD

10-7621821-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7621821
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 7621821
    reference: chr 10
allele count: 10
allele frequency: 8.236825198095645e-5
allele num: 121406
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000256861
  ensembl transcript: ENST00000256861
  gene symbol: ITIH5
  hgvsc: ENST00000256861.6:c.1315G>A
  hgvsp: ENSP00000256861.6:p.Gly439Ser
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000476417
  gene symbol: ITIH5
  hgvsc: ENST00000476417.1:n.5858G>A
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000419386
  ensembl transcript: ENST00000461751
  gene symbol: ITIH5
  hgvsc: ENST00000461751.1:c.*401G>A
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000298441
  ensembl transcript: ENST00000298441
  gene symbol: ITIH5
  hgvsc: ENST00000298441.6:c.673G>A
  hgvsp: ENSP00000298441.6:p.Gly225Ser
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380333
  ensembl transcript: ENST00000397146
  gene symbol: ITIH5
  hgvsc: ENST00000397146.2:c.1315G>A
  hgvsp: ENSP00000380333.2:p.Gly439Ser
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000434980
  gene symbol: ITIH5
  hgvsc: ENST00000434980.1:n.940G>A
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000387969
  ensembl transcript: ENST00000446830
  gene symbol: ITIH5
  hgvsc: ENST00000446830.2:c.661G>A
  hgvsp: ENSP00000387969.2:p.Gly221Ser
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380332
  ensembl transcript: ENST00000397145
  gene symbol: ITIH5
  hgvsc: ENST00000397145.2:c.1315G>A
  hgvsp: ENSP00000380332.2:p.Gly439Ser
  variant of: http://identifiers.org/hgnc/21449
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9797
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1693
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30816
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15718
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 319
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2244
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Gly439Ser
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD

10-7621822-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7621822
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 7621822
    reference: chr 10
allele count: 1
allele frequency: 8.236960890909689e-6
allele num: 121404
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000419386
  ensembl transcript: ENST00000461751
  gene symbol: ITIH5
  hgvsc: ENST00000461751.1:c.*400C>T
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000298441
  ensembl transcript: ENST00000298441
  gene symbol: ITIH5
  hgvsc: ENST00000298441.6:c.672C>T
  hgvsp: ENST00000298441.6:c.672C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000256861
  ensembl transcript: ENST00000256861
  gene symbol: ITIH5
  hgvsc: ENST00000256861.6:c.1314C>T
  hgvsp: ENST00000256861.6:c.1314C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380332
  ensembl transcript: ENST00000397145
  gene symbol: ITIH5
  hgvsc: ENST00000397145.2:c.1314C>T
  hgvsp: ENST00000397145.2:c.1314C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000476417
  gene symbol: ITIH5
  hgvsc: ENST00000476417.1:n.5857C>T
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000387969
  ensembl transcript: ENST00000446830
  gene symbol: ITIH5
  hgvsc: ENST00000446830.2:c.660C>T
  hgvsp: ENST00000446830.2:c.660C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380333
  ensembl transcript: ENST00000397146
  gene symbol: ITIH5
  hgvsc: ENST00000397146.2:c.1314C>T
  hgvsp: ENST00000397146.2:c.1314C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000434980
  gene symbol: ITIH5
  hgvsc: ENST00000434980.1:n.939C>T
  variant of: http://identifiers.org/hgnc/21449
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15719
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9799
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30824
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1693
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ile438Ile
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD

10-7621823-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7621823
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 7621823
    reference: chr 10
allele count: 2
allele frequency: 1.647392178181938e-5
allele num: 121404
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000419386
  ensembl transcript: ENST00000461751
  gene symbol: ITIH5
  hgvsc: ENST00000461751.1:c.*399T>C
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380332
  ensembl transcript: ENST00000397145
  gene symbol: ITIH5
  hgvsc: ENST00000397145.2:c.1313T>C
  hgvsp: ENSP00000380332.2:p.Ile438Thr
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000434980
  gene symbol: ITIH5
  hgvsc: ENST00000434980.1:n.938T>C
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000387969
  ensembl transcript: ENST00000446830
  gene symbol: ITIH5
  hgvsc: ENST00000446830.2:c.659T>C
  hgvsp: ENSP00000387969.2:p.Ile220Thr
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380333
  ensembl transcript: ENST00000397146
  gene symbol: ITIH5
  hgvsc: ENST00000397146.2:c.1313T>C
  hgvsp: ENSP00000380333.2:p.Ile438Thr
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000298441
  ensembl transcript: ENST00000298441
  gene symbol: ITIH5
  hgvsc: ENST00000298441.6:c.671T>C
  hgvsp: ENSP00000298441.6:p.Ile224Thr
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000256861
  ensembl transcript: ENST00000256861
  gene symbol: ITIH5
  hgvsc: ENST00000256861.6:c.1313T>C
  hgvsp: ENSP00000256861.6:p.Ile438Thr
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000476417
  gene symbol: ITIH5
  hgvsc: ENST00000476417.1:n.5856T>C
  variant of: http://identifiers.org/hgnc/21449
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 15718
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9797
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30829
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1693
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ile438Thr
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
population: Latino
population: European (Finnish)
reference allele: A
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: ReadPosRankSum

10-7621825-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7621825
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 7621825
    reference: chr 10
allele count: 1
allele frequency: 8.236960890909689e-6
allele num: 121404
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380333
  ensembl transcript: ENST00000397146
  gene symbol: ITIH5
  hgvsc: ENST00000397146.2:c.1311C>G
  hgvsp: ENST00000397146.2:c.1311C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000256861
  ensembl transcript: ENST00000256861
  gene symbol: ITIH5
  hgvsc: ENST00000256861.6:c.1311C>G
  hgvsp: ENST00000256861.6:c.1311C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000298441
  ensembl transcript: ENST00000298441
  gene symbol: ITIH5
  hgvsc: ENST00000298441.6:c.669C>G
  hgvsp: ENST00000298441.6:c.669C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000387969
  ensembl transcript: ENST00000446830
  gene symbol: ITIH5
  hgvsc: ENST00000446830.2:c.657C>G
  hgvsp: ENST00000446830.2:c.657C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000434980
  gene symbol: ITIH5
  hgvsc: ENST00000434980.1:n.936C>G
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000419386
  ensembl transcript: ENST00000461751
  gene symbol: ITIH5
  hgvsc: ENST00000461751.1:c.*397C>G
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380332
  ensembl transcript: ENST00000397145
  gene symbol: ITIH5
  hgvsc: ENST00000397145.2:c.1311C>G
  hgvsp: ENST00000397145.2:c.1311C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000476417
  gene symbol: ITIH5
  hgvsc: ENST00000476417.1:n.5854C>G
  variant of: http://identifiers.org/hgnc/21449
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9797
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30829
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15718
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1693
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8577
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43487
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Gly437Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: Other
population: Latino
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum

10-7621826-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7621826
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 7621826
    reference: chr 10
allele count: 1
allele frequency: 8.236960890909689e-6
allele num: 121404
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380333
  ensembl transcript: ENST00000397146
  gene symbol: ITIH5
  hgvsc: ENST00000397146.2:c.1310G>A
  hgvsp: ENSP00000380333.2:p.Gly437Asp
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000434980
  gene symbol: ITIH5
  hgvsc: ENST00000434980.1:n.935G>A
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000387969
  ensembl transcript: ENST00000446830
  gene symbol: ITIH5
  hgvsc: ENST00000446830.2:c.656G>A
  hgvsp: ENSP00000387969.2:p.Gly219Asp
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000476417
  gene symbol: ITIH5
  hgvsc: ENST00000476417.1:n.5853G>A
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000298441
  ensembl transcript: ENST00000298441
  gene symbol: ITIH5
  hgvsc: ENST00000298441.6:c.668G>A
  hgvsp: ENSP00000298441.6:p.Gly223Asp
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000256861
  ensembl transcript: ENST00000256861
  gene symbol: ITIH5
  hgvsc: ENST00000256861.6:c.1310G>A
  hgvsp: ENSP00000256861.6:p.Gly437Asp
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380332
  ensembl transcript: ENST00000397145
  gene symbol: ITIH5
  hgvsc: ENST00000397145.2:c.1310G>A
  hgvsp: ENSP00000380332.2:p.Gly437Asp
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000419386
  ensembl transcript: ENST00000461751
  gene symbol: ITIH5
  hgvsc: ENST00000461751.1:c.*396G>A
  variant of: http://identifiers.org/hgnc/21449
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1693
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30829
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15716
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9798
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 408
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Gly437Asp
num of homozygotes: 0
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum

10-7621830-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7621830
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 7621830
    reference: chr 10
allele count: 12
allele frequency: 9.884678747940691e-5
allele num: 121400
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000256861
  ensembl transcript: ENST00000256861
  gene symbol: ITIH5
  hgvsc: ENST00000256861.6:c.1306A>G
  hgvsp: ENSP00000256861.6:p.Ile436Val
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000387969
  ensembl transcript: ENST00000446830
  gene symbol: ITIH5
  hgvsc: ENST00000446830.2:c.652A>G
  hgvsp: ENSP00000387969.2:p.Ile218Val
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000298441
  ensembl transcript: ENST00000298441
  gene symbol: ITIH5
  hgvsc: ENST00000298441.6:c.664A>G
  hgvsp: ENSP00000298441.6:p.Ile222Val
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380333
  ensembl transcript: ENST00000397146
  gene symbol: ITIH5
  hgvsc: ENST00000397146.2:c.1306A>G
  hgvsp: ENSP00000380333.2:p.Ile436Val
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000434980
  gene symbol: ITIH5
  hgvsc: ENST00000434980.1:n.931A>G
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380332
  ensembl transcript: ENST00000397145
  gene symbol: ITIH5
  hgvsc: ENST00000397145.2:c.1306A>G
  hgvsp: ENSP00000380332.2:p.Ile436Val
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000476417
  gene symbol: ITIH5
  hgvsc: ENST00000476417.1:n.5849A>G
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000419386
  ensembl transcript: ENST00000461751
  gene symbol: ITIH5
  hgvsc: ENST00000461751.1:c.*392A>G
  variant of: http://identifiers.org/hgnc/21449
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 491
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9798
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30828
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 9.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1692
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15710
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2243
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2296
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 408
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Ile436Val
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
reference allele: T
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD

10-7621839-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7621839
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 7621839
    reference: chr 10
allele count: 24
allele frequency: 1.977033461291332e-4
allele num: 121394
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380332
  ensembl transcript: ENST00000397145
  gene symbol: ITIH5
  hgvsc: ENST00000397145.2:c.1297A>G
  hgvsp: ENSP00000380332.2:p.Ile433Val
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000387969
  ensembl transcript: ENST00000446830
  gene symbol: ITIH5
  hgvsc: ENST00000446830.2:c.643A>G
  hgvsp: ENSP00000387969.2:p.Ile215Val
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000476417
  gene symbol: ITIH5
  hgvsc: ENST00000476417.1:n.5840A>G
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000298441
  ensembl transcript: ENST00000298441
  gene symbol: ITIH5
  hgvsc: ENST00000298441.6:c.655A>G
  hgvsp: ENSP00000298441.6:p.Ile219Val
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000434980
  gene symbol: ITIH5
  hgvsc: ENST00000434980.1:n.922A>G
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380333
  ensembl transcript: ENST00000397146
  gene symbol: ITIH5
  hgvsc: ENST00000397146.2:c.1297A>G
  hgvsp: ENSP00000380333.2:p.Ile433Val
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000419386
  ensembl transcript: ENST00000461751
  gene symbol: ITIH5
  hgvsc: ENST00000461751.1:c.*383A>G
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000256861
  ensembl transcript: ENST00000256861
  gene symbol: ITIH5
  hgvsc: ENST00000256861.6:c.1297A>G
  hgvsp: ENSP00000256861.6:p.Ile433Val
  variant of: http://identifiers.org/hgnc/21449
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 15710
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 9.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1690
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 732
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 9.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 30825
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9798
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 406
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ile433Val
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: T
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum

http://identifiers.org/exac.variant/10-7621841-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7621841
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 7621841
    reference: chr 10
allele count: 1
allele frequency: 8.237639422047218e-6
allele num: 121394
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000298441
  ensembl transcript: ENST00000298441
  gene symbol: ITIH5
  hgvsc: ENST00000298441.6:c.653G>T
  hgvsp: ENSP00000298441.6:p.Cys218Phe
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000419386
  ensembl transcript: ENST00000461751
  gene symbol: ITIH5
  hgvsc: ENST00000461751.1:c.*381G>T
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000476417
  gene symbol: ITIH5
  hgvsc: ENST00000476417.1:n.5838G>T
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000256861
  ensembl transcript: ENST00000256861
  gene symbol: ITIH5
  hgvsc: ENST00000256861.6:c.1295G>T
  hgvsp: ENSP00000256861.6:p.Cys432Phe
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000434980
  gene symbol: ITIH5
  hgvsc: ENST00000434980.1:n.920G>T
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380332
  ensembl transcript: ENST00000397145
  gene symbol: ITIH5
  hgvsc: ENST00000397145.2:c.1295G>T
  hgvsp: ENSP00000380332.2:p.Cys432Phe
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380333
  ensembl transcript: ENST00000397146
  gene symbol: ITIH5
  hgvsc: ENST00000397146.2:c.1295G>T
  hgvsp: ENSP00000380333.2:p.Cys432Phe
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000387969
  ensembl transcript: ENST00000446830
  gene symbol: ITIH5
  hgvsc: ENST00000446830.2:c.641G>T
  hgvsp: ENSP00000387969.2:p.Cys214Phe
  variant of: http://identifiers.org/hgnc/21449
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1692
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9805
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15713
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 732
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30835
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43505
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Cys432Phe
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
population: African
population: European (Finnish)
population: South Asian
reference allele: C
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff

10-7621853-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7621853
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 7621853
    reference: chr 10
allele count: 1
allele frequency: 8.237910865804433e-6
allele num: 121390
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000298441
  ensembl transcript: ENST00000298441
  gene symbol: ITIH5
  hgvsc: ENST00000298441.6:c.641G>C
  hgvsp: ENSP00000298441.6:p.Arg214Pro
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000419386
  ensembl transcript: ENST00000461751
  gene symbol: ITIH5
  hgvsc: ENST00000461751.1:c.*369G>C
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000256861
  ensembl transcript: ENST00000256861
  gene symbol: ITIH5
  hgvsc: ENST00000256861.6:c.1283G>C
  hgvsp: ENSP00000256861.6:p.Arg428Pro
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380333
  ensembl transcript: ENST00000397146
  gene symbol: ITIH5
  hgvsc: ENST00000397146.2:c.1283G>C
  hgvsp: ENSP00000380333.2:p.Arg428Pro
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000476417
  gene symbol: ITIH5
  hgvsc: ENST00000476417.1:n.5826G>C
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380332
  ensembl transcript: ENST00000397145
  gene symbol: ITIH5
  hgvsc: ENST00000397145.2:c.1283G>C
  hgvsp: ENSP00000380332.2:p.Arg428Pro
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000434980
  gene symbol: ITIH5
  hgvsc: ENST00000434980.1:n.908G>C
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000387969
  ensembl transcript: ENST00000446830
  gene symbol: ITIH5
  hgvsc: ENST00000446830.2:c.629G>C
  hgvsp: ENSP00000387969.2:p.Arg210Pro
  variant of: http://identifiers.org/hgnc/21449
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1686
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15715
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 731
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9789
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30847
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1024
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2288
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8576
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 317
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Arg428Pro
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: VQSLOD

10-7621854-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7621854
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 7621854
    reference: chr 10
allele count: 4
allele frequency: 3.295272930980509e-5
allele num: 121386
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000256861
  ensembl transcript: ENST00000256861
  gene symbol: ITIH5
  hgvsc: ENST00000256861.6:c.1282C>T
  hgvsp: ENSP00000256861.6:p.Arg428Ter
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000419386
  ensembl transcript: ENST00000461751
  gene symbol: ITIH5
  hgvsc: ENST00000461751.1:c.*368C>T
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000298441
  ensembl transcript: ENST00000298441
  gene symbol: ITIH5
  hgvsc: ENST00000298441.6:c.640C>T
  hgvsp: ENSP00000298441.6:p.Arg214Ter
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380332
  ensembl transcript: ENST00000397145
  gene symbol: ITIH5
  hgvsc: ENST00000397145.2:c.1282C>T
  hgvsp: ENSP00000380332.2:p.Arg428Ter
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000476417
  gene symbol: ITIH5
  hgvsc: ENST00000476417.1:n.5825C>T
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000387969
  ensembl transcript: ENST00000446830
  gene symbol: ITIH5
  hgvsc: ENST00000446830.2:c.628C>T
  hgvsp: ENSP00000387969.2:p.Arg210Ter
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380333
  ensembl transcript: ENST00000397146
  gene symbol: ITIH5
  hgvsc: ENST00000397146.2:c.1282C>T
  hgvsp: ENSP00000380333.2:p.Arg428Ter
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000434980
  gene symbol: ITIH5
  hgvsc: ENST00000434980.1:n.907C>T
  variant of: http://identifiers.org/hgnc/21449
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 729
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15720
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9787
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1687
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30842
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 318
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Arg428Ter
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
reference allele: G
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum

10-7621858-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7621858
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 7621858
    reference: chr 10
allele count: 3
allele frequency: 2.471454698235381e-5
allele num: 121386
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000419386
  ensembl transcript: ENST00000461751
  gene symbol: ITIH5
  hgvsc: ENST00000461751.1:c.*364C>T
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000387969
  ensembl transcript: ENST00000446830
  gene symbol: ITIH5
  hgvsc: ENST00000446830.2:c.624C>T
  hgvsp: ENST00000446830.2:c.624C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000434980
  gene symbol: ITIH5
  hgvsc: ENST00000434980.1:n.903C>T
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380333
  ensembl transcript: ENST00000397146
  gene symbol: ITIH5
  hgvsc: ENST00000397146.2:c.1278C>T
  hgvsp: ENST00000397146.2:c.1278C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380332
  ensembl transcript: ENST00000397145
  gene symbol: ITIH5
  hgvsc: ENST00000397145.2:c.1278C>T
  hgvsp: ENST00000397145.2:c.1278C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000256861
  ensembl transcript: ENST00000256861
  gene symbol: ITIH5
  hgvsc: ENST00000256861.6:c.1278C>T
  hgvsp: ENST00000256861.6:c.1278C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000298441
  ensembl transcript: ENST00000298441
  gene symbol: ITIH5
  hgvsc: ENST00000298441.6:c.636C>T
  hgvsp: ENST00000298441.6:c.636C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000476417
  gene symbol: ITIH5
  hgvsc: ENST00000476417.1:n.5821C>T
  variant of: http://identifiers.org/hgnc/21449
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15719
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9789
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30846
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1684
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 727
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43510
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 405
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2291
  bin: 9.75e1
  variant carriers: 3
hgvs: p.Ala426Ala
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: South Asian
reference allele: G
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum

10-7621862-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7621862
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 7621862
    reference: chr 10
allele count: 4
allele frequency: 3.295218637756615e-5
allele num: 121388
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380333
  ensembl transcript: ENST00000397146
  gene symbol: ITIH5
  hgvsc: ENST00000397146.2:c.1274A>G
  hgvsp: ENSP00000380333.2:p.Glu425Gly
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000476417
  gene symbol: ITIH5
  hgvsc: ENST00000476417.1:n.5817A>G
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000256861
  ensembl transcript: ENST00000256861
  gene symbol: ITIH5
  hgvsc: ENST00000256861.6:c.1274A>G
  hgvsp: ENSP00000256861.6:p.Glu425Gly
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000298441
  ensembl transcript: ENST00000298441
  gene symbol: ITIH5
  hgvsc: ENST00000298441.6:c.632A>G
  hgvsp: ENSP00000298441.6:p.Glu211Gly
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380332
  ensembl transcript: ENST00000397145
  gene symbol: ITIH5
  hgvsc: ENST00000397145.2:c.1274A>G
  hgvsp: ENSP00000380332.2:p.Glu425Gly
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000419386
  ensembl transcript: ENST00000461751
  gene symbol: ITIH5
  hgvsc: ENST00000461751.1:c.*360A>G
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000387969
  ensembl transcript: ENST00000446830
  gene symbol: ITIH5
  hgvsc: ENST00000446830.2:c.620A>G
  hgvsp: ENSP00000387969.2:p.Glu207Gly
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000434980
  gene symbol: ITIH5
  hgvsc: ENST00000434980.1:n.899A>G
  variant of: http://identifiers.org/hgnc/21449
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 727
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15720
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30853
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9785
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1680
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 317
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 405
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2282
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Glu425Gly
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ

10-7621865-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7621865
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 7621865
    reference: chr 10
allele count: 4
allele frequency: 3.295272930980509e-5
allele num: 121386
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000419386
  ensembl transcript: ENST00000461751
  gene symbol: ITIH5
  hgvsc: ENST00000461751.1:c.*357G>A
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000298441
  ensembl transcript: ENST00000298441
  gene symbol: ITIH5
  hgvsc: ENST00000298441.6:c.629G>A
  hgvsp: ENSP00000298441.6:p.Arg210Gln
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380333
  ensembl transcript: ENST00000397146
  gene symbol: ITIH5
  hgvsc: ENST00000397146.2:c.1271G>A
  hgvsp: ENSP00000380333.2:p.Arg424Gln
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000387969
  ensembl transcript: ENST00000446830
  gene symbol: ITIH5
  hgvsc: ENST00000446830.2:c.617G>A
  hgvsp: ENSP00000387969.2:p.Arg206Gln
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000476417
  gene symbol: ITIH5
  hgvsc: ENST00000476417.1:n.5814G>A
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380332
  ensembl transcript: ENST00000397145
  gene symbol: ITIH5
  hgvsc: ENST00000397145.2:c.1271G>A
  hgvsp: ENSP00000380332.2:p.Arg424Gln
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000256861
  ensembl transcript: ENST00000256861
  gene symbol: ITIH5
  hgvsc: ENST00000256861.6:c.1271G>A
  hgvsp: ENSP00000256861.6:p.Arg424Gln
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000434980
  gene symbol: ITIH5
  hgvsc: ENST00000434980.1:n.896G>A
  variant of: http://identifiers.org/hgnc/21449
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1681
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 15722
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30854
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 727
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9782
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2230
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Arg424Gln
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: VQSLOD

10-7621866-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7621866
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 7621866
    reference: chr 10
allele count: 5
allele frequency: 4.11936265221045e-5
allele num: 121378
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000256861
  ensembl transcript: ENST00000256861
  gene symbol: ITIH5
  hgvsc: ENST00000256861.6:c.1270C>T
  hgvsp: ENSP00000256861.6:p.Arg424Ter
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380333
  ensembl transcript: ENST00000397146
  gene symbol: ITIH5
  hgvsc: ENST00000397146.2:c.1270C>T
  hgvsp: ENSP00000380333.2:p.Arg424Ter
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000387969
  ensembl transcript: ENST00000446830
  gene symbol: ITIH5
  hgvsc: ENST00000446830.2:c.616C>T
  hgvsp: ENSP00000387969.2:p.Arg206Ter
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000298441
  ensembl transcript: ENST00000298441
  gene symbol: ITIH5
  hgvsc: ENST00000298441.6:c.628C>T
  hgvsp: ENSP00000298441.6:p.Arg210Ter
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000419386
  ensembl transcript: ENST00000461751
  gene symbol: ITIH5
  hgvsc: ENST00000461751.1:c.*356C>T
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380332
  ensembl transcript: ENST00000397145
  gene symbol: ITIH5
  hgvsc: ENST00000397145.2:c.1270C>T
  hgvsp: ENSP00000380332.2:p.Arg424Ter
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000476417
  gene symbol: ITIH5
  hgvsc: ENST00000476417.1:n.5813C>T
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000434980
  gene symbol: ITIH5
  hgvsc: ENST00000434980.1:n.895C>T
  variant of: http://identifiers.org/hgnc/21449
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 724
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30845
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1670
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9773
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15723
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1014
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 314
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Arg424Ter
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: African
reference allele: G
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: QD

10-7621866-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7621866
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 7621866
    reference: chr 10
allele count: 105
allele frequency: 8.650661569641945e-4
allele num: 121378
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380333
  ensembl transcript: ENST00000397146
  gene symbol: ITIH5
  hgvsc: ENST00000397146.2:c.1270C>A
  hgvsp: ENST00000397146.2:c.1270C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000298441
  ensembl transcript: ENST00000298441
  gene symbol: ITIH5
  hgvsc: ENST00000298441.6:c.628C>A
  hgvsp: ENST00000298441.6:c.628C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000387969
  ensembl transcript: ENST00000446830
  gene symbol: ITIH5
  hgvsc: ENST00000446830.2:c.616C>A
  hgvsp: ENST00000446830.2:c.616C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380332
  ensembl transcript: ENST00000397145
  gene symbol: ITIH5
  hgvsc: ENST00000397145.2:c.1270C>A
  hgvsp: ENST00000397145.2:c.1270C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000434980
  gene symbol: ITIH5
  hgvsc: ENST00000434980.1:n.895C>A
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000476417
  gene symbol: ITIH5
  hgvsc: ENST00000476417.1:n.5813C>A
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000419386
  ensembl transcript: ENST00000461751
  gene symbol: ITIH5
  hgvsc: ENST00000461751.1:c.*356C>A
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000256861
  ensembl transcript: ENST00000256861
  gene symbol: ITIH5
  hgvsc: ENST00000256861.6:c.1270C>A
  hgvsp: ENST00000256861.6:c.1270C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 5.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1670
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 6.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 7.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15723
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 6.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 30845
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 724
  bin: 4.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 9773
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 9.75e1
  variant carriers: 37
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 9.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 4.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 400
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Arg424Arg
num of homozygotes: 1
population: South Asian
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: VQSLOD

10-7621867-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7621867
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 7621867
    reference: chr 10
allele count: 3
allele frequency: 2.471495419495156e-5
allele num: 121384
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000387969
  ensembl transcript: ENST00000446830
  gene symbol: ITIH5
  hgvsc: ENST00000446830.2:c.615C>A
  hgvsp: ENST00000446830.2:c.615C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000476417
  gene symbol: ITIH5
  hgvsc: ENST00000476417.1:n.5812C>A
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000298441
  ensembl transcript: ENST00000298441
  gene symbol: ITIH5
  hgvsc: ENST00000298441.6:c.627C>A
  hgvsp: ENST00000298441.6:c.627C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000256861
  ensembl transcript: ENST00000256861
  gene symbol: ITIH5
  hgvsc: ENST00000256861.6:c.1269C>A
  hgvsp: ENST00000256861.6:c.1269C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380332
  ensembl transcript: ENST00000397145
  gene symbol: ITIH5
  hgvsc: ENST00000397145.2:c.1269C>A
  hgvsp: ENST00000397145.2:c.1269C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000434980
  gene symbol: ITIH5
  hgvsc: ENST00000434980.1:n.894C>A
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380333
  ensembl transcript: ENST00000397146
  gene symbol: ITIH5
  hgvsc: ENST00000397146.2:c.1269C>A
  hgvsp: ENST00000397146.2:c.1269C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000419386
  ensembl transcript: ENST00000461751
  gene symbol: ITIH5
  hgvsc: ENST00000461751.1:c.*355C>A
  variant of: http://identifiers.org/hgnc/21449
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1674
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30897
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 191
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15754
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9792
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2209
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 401
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2277
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Thr423Thr
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: BaseQRankSum

10-7621869-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7621869
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 7621869
    reference: chr 10
allele count: 20
allele frequency: 1.647717910693689e-4
allele num: 121380
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000476417
  gene symbol: ITIH5
  hgvsc: ENST00000476417.1:n.5810A>G
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380332
  ensembl transcript: ENST00000397145
  gene symbol: ITIH5
  hgvsc: ENST00000397145.2:c.1267A>G
  hgvsp: ENSP00000380332.2:p.Thr423Ala
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380333
  ensembl transcript: ENST00000397146
  gene symbol: ITIH5
  hgvsc: ENST00000397146.2:c.1267A>G
  hgvsp: ENSP00000380333.2:p.Thr423Ala
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000419386
  ensembl transcript: ENST00000461751
  gene symbol: ITIH5
  hgvsc: ENST00000461751.1:c.*353A>G
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000256861
  ensembl transcript: ENST00000256861
  gene symbol: ITIH5
  hgvsc: ENST00000256861.6:c.1267A>G
  hgvsp: ENSP00000256861.6:p.Thr423Ala
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000434980
  gene symbol: ITIH5
  hgvsc: ENST00000434980.1:n.892A>G
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000387969
  ensembl transcript: ENST00000446830
  gene symbol: ITIH5
  hgvsc: ENST00000446830.2:c.613A>G
  hgvsp: ENSP00000387969.2:p.Thr205Ala
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000298441
  ensembl transcript: ENST00000298441
  gene symbol: ITIH5
  hgvsc: ENST00000298441.6:c.625A>G
  hgvsp: ENSP00000298441.6:p.Thr209Ala
  variant of: http://identifiers.org/hgnc/21449
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30895
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9793
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15751
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 9.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 1675
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8589
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2210
  bin: 9.75e1
  variant carriers: 20
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Thr423Ala
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: T
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum

10-7621875-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7621875
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 7621875
    reference: chr 10
allele count: 715
allele frequency: 5.890785657790667e-3
allele num: 121376
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000256861
  ensembl transcript: ENST00000256861
  gene symbol: ITIH5
  hgvsc: ENST00000256861.6:c.1261A>C
  hgvsp: ENSP00000256861.6:p.Asn421His
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380332
  ensembl transcript: ENST00000397145
  gene symbol: ITIH5
  hgvsc: ENST00000397145.2:c.1261A>C
  hgvsp: ENSP00000380332.2:p.Asn421His
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000434980
  gene symbol: ITIH5
  hgvsc: ENST00000434980.1:n.886A>C
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000476417
  gene symbol: ITIH5
  hgvsc: ENST00000476417.1:n.5804A>C
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000419386
  ensembl transcript: ENST00000461751
  gene symbol: ITIH5
  hgvsc: ENST00000461751.1:c.*347A>C
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000387969
  ensembl transcript: ENST00000446830
  gene symbol: ITIH5
  hgvsc: ENST00000446830.2:c.607A>C
  hgvsp: ENSP00000387969.2:p.Asn203His
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380333
  ensembl transcript: ENST00000397146
  gene symbol: ITIH5
  hgvsc: ENST00000397146.2:c.1261A>C
  hgvsp: ENSP00000380333.2:p.Asn421His
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000298441
  ensembl transcript: ENST00000298441
  gene symbol: ITIH5
  hgvsc: ENST00000298441.6:c.619A>C
  hgvsp: ENSP00000298441.6:p.Asn207His
  variant of: http://identifiers.org/hgnc/21449
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1629
  bin: 3.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 5.75e1
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 7.25e1
  variant carriers: 52
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 4.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 8.25e1
  variant carriers: 55
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 7.75e1
  variant carriers: 50
genotype depth: GenotypeDepth
  all individuals: 9764
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 4.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30872
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15707
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.25e1
  variant carriers: 42
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 5.25e1
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 8.75e1
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 9.25e1
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 9.75e1
  variant carriers: 280
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 6.75e1
  variant carriers: 43
genotype quality: GenotypeQuality
  all individuals: 2256
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Asn421His
num of homozygotes: 3
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: Latino
reference allele: T
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP

10-7621889-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7621889
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 7621889
    reference: chr 10
allele count: 1
allele frequency: 8.241577108195424e-6
allele num: 121336
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000387969
  ensembl transcript: ENST00000446830
  gene symbol: ITIH5
  hgvsc: ENST00000446830.2:c.593C>A
  hgvsp: ENSP00000387969.2:p.Thr198Asn
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000419386
  ensembl transcript: ENST00000461751
  gene symbol: ITIH5
  hgvsc: ENST00000461751.1:c.*333C>A
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380333
  ensembl transcript: ENST00000397146
  gene symbol: ITIH5
  hgvsc: ENST00000397146.2:c.1247C>A
  hgvsp: ENSP00000380333.2:p.Thr416Asn
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000298441
  ensembl transcript: ENST00000298441
  gene symbol: ITIH5
  hgvsc: ENST00000298441.6:c.605C>A
  hgvsp: ENSP00000298441.6:p.Thr202Asn
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000256861
  ensembl transcript: ENST00000256861
  gene symbol: ITIH5
  hgvsc: ENST00000256861.6:c.1247C>A
  hgvsp: ENSP00000256861.6:p.Thr416Asn
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000476417
  gene symbol: ITIH5
  hgvsc: ENST00000476417.1:n.5790C>A
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380332
  ensembl transcript: ENST00000397145
  gene symbol: ITIH5
  hgvsc: ENST00000397145.2:c.1247C>A
  hgvsp: ENSP00000380332.2:p.Thr416Asn
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000434980
  gene symbol: ITIH5
  hgvsc: ENST00000434980.1:n.872C>A
  variant of: http://identifiers.org/hgnc/21449
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9890
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 665
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15829
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1629
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31258
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2244
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Thr416Asn
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
population: South Asian
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD

10-7621892-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7621892
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 7621892
    reference: chr 10
allele count: 69
allele frequency: 5.687625704771011e-4
allele num: 121316
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380333
  ensembl transcript: ENST00000397146
  gene symbol: ITIH5
  hgvsc: ENST00000397146.2:c.1244A>G
  hgvsp: ENSP00000380333.2:p.His415Arg
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000476417
  gene symbol: ITIH5
  hgvsc: ENST00000476417.1:n.5787A>G
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000298441
  ensembl transcript: ENST00000298441
  gene symbol: ITIH5
  hgvsc: ENST00000298441.6:c.602A>G
  hgvsp: ENSP00000298441.6:p.His201Arg
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000434980
  gene symbol: ITIH5
  hgvsc: ENST00000434980.1:n.869A>G
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000419386
  ensembl transcript: ENST00000461751
  gene symbol: ITIH5
  hgvsc: ENST00000461751.1:c.*330A>G
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000387969
  ensembl transcript: ENST00000446830
  gene symbol: ITIH5
  hgvsc: ENST00000446830.2:c.590A>G
  hgvsp: ENSP00000387969.2:p.His197Arg
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380332
  ensembl transcript: ENST00000397145
  gene symbol: ITIH5
  hgvsc: ENST00000397145.2:c.1244A>G
  hgvsp: ENSP00000380332.2:p.His415Arg
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000256861
  ensembl transcript: ENST00000256861
  gene symbol: ITIH5
  hgvsc: ENST00000256861.6:c.1244A>G
  hgvsp: ENSP00000256861.6:p.His415Arg
  variant of: http://identifiers.org/hgnc/21449
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9877
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1628
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 4.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 15828
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31239
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 9.75e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 6.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1012
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1659
  bin: 9.75e1
  variant carriers: 69
genotype quality: GenotypeQuality
  all individuals: 2238
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.25e1
  variant carriers: 0
hgvs: p.His415Arg
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ

10-7621894-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7621894
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 7621894
    reference: chr 10
allele count: 73
allele frequency: 6.018633028279331e-4
allele num: 121290
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380333
  ensembl transcript: ENST00000397146
  gene symbol: ITIH5
  hgvsc: ENST00000397146.2:c.1242G>A
  hgvsp: ENST00000397146.2:c.1242G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000256861
  ensembl transcript: ENST00000256861
  gene symbol: ITIH5
  hgvsc: ENST00000256861.6:c.1242G>A
  hgvsp: ENST00000256861.6:c.1242G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000434980
  gene symbol: ITIH5
  hgvsc: ENST00000434980.1:n.867G>A
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000419386
  ensembl transcript: ENST00000461751
  gene symbol: ITIH5
  hgvsc: ENST00000461751.1:c.*328G>A
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380332
  ensembl transcript: ENST00000397145
  gene symbol: ITIH5
  hgvsc: ENST00000397145.2:c.1242G>A
  hgvsp: ENST00000397145.2:c.1242G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000298441
  ensembl transcript: ENST00000298441
  gene symbol: ITIH5
  hgvsc: ENST00000298441.6:c.600G>A
  hgvsp: ENST00000298441.6:c.600G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000476417
  gene symbol: ITIH5
  hgvsc: ENST00000476417.1:n.5785G>A
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000387969
  ensembl transcript: ENST00000446830
  gene symbol: ITIH5
  hgvsc: ENST00000446830.2:c.588G>A
  hgvsp: ENST00000446830.2:c.588G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31257
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 7.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 5.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1628
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 15834
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 5.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 6.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 9876
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 4.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 368
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Thr414Thr
num of homozygotes: 2
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: Other
reference allele: C
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum

10-7621895-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7621895
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 7621895
    reference: chr 10
allele count: 225
allele frequency: 1.855119304783734e-3
allele num: 121286
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000298441
  ensembl transcript: ENST00000298441
  gene symbol: ITIH5
  hgvsc: ENST00000298441.6:c.599C>T
  hgvsp: ENSP00000298441.6:p.Thr200Met
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380333
  ensembl transcript: ENST00000397146
  gene symbol: ITIH5
  hgvsc: ENST00000397146.2:c.1241C>T
  hgvsp: ENSP00000380333.2:p.Thr414Met
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000256861
  ensembl transcript: ENST00000256861
  gene symbol: ITIH5
  hgvsc: ENST00000256861.6:c.1241C>T
  hgvsp: ENSP00000256861.6:p.Thr414Met
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000476417
  gene symbol: ITIH5
  hgvsc: ENST00000476417.1:n.5784C>T
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000434980
  gene symbol: ITIH5
  hgvsc: ENST00000434980.1:n.866C>T
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000419386
  ensembl transcript: ENST00000461751
  gene symbol: ITIH5
  hgvsc: ENST00000461751.1:c.*327C>T
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000387969
  ensembl transcript: ENST00000446830
  gene symbol: ITIH5
  hgvsc: ENST00000446830.2:c.587C>T
  hgvsp: ENSP00000387969.2:p.Thr196Met
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380332
  ensembl transcript: ENST00000397145
  gene symbol: ITIH5
  hgvsc: ENST00000397145.2:c.1241C>T
  hgvsp: ENSP00000380332.2:p.Thr414Met
  variant of: http://identifiers.org/hgnc/21449
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 5.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.75e1
  variant carriers: 59
genotype depth: GenotypeDepth
  all individuals: 31282
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 4.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.75e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 4.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 15845
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1616
  bin: 3.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 6.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9874
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 5.75e1
  variant carriers: 19
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 363
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Thr414Met
num of homozygotes: 2
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: G
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum

10-7621895-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7621895
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 7621895
    reference: chr 10
allele count: 6
allele frequency: 4.946984812756625e-5
allele num: 121286
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000298441
  ensembl transcript: ENST00000298441
  gene symbol: ITIH5
  hgvsc: ENST00000298441.6:c.599C>A
  hgvsp: ENSP00000298441.6:p.Thr200Lys
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000387969
  ensembl transcript: ENST00000446830
  gene symbol: ITIH5
  hgvsc: ENST00000446830.2:c.587C>A
  hgvsp: ENSP00000387969.2:p.Thr196Lys
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000434980
  gene symbol: ITIH5
  hgvsc: ENST00000434980.1:n.866C>A
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380333
  ensembl transcript: ENST00000397146
  gene symbol: ITIH5
  hgvsc: ENST00000397146.2:c.1241C>A
  hgvsp: ENSP00000380333.2:p.Thr414Lys
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380332
  ensembl transcript: ENST00000397145
  gene symbol: ITIH5
  hgvsc: ENST00000397145.2:c.1241C>A
  hgvsp: ENSP00000380332.2:p.Thr414Lys
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000476417
  gene symbol: ITIH5
  hgvsc: ENST00000476417.1:n.5784C>A
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000419386
  ensembl transcript: ENST00000461751
  gene symbol: ITIH5
  hgvsc: ENST00000461751.1:c.*327C>A
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000256861
  ensembl transcript: ENST00000256861
  gene symbol: ITIH5
  hgvsc: ENST00000256861.6:c.1241C>A
  hgvsp: ENSP00000256861.6:p.Thr414Lys
  variant of: http://identifiers.org/hgnc/21449
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15845
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31282
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1616
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9874
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 289
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1006
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44051
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Thr414Lys
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum

10-7621899-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7621899
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 7621899
    reference: chr 10
allele count: 1
allele frequency: 8.247014580721778e-6
allele num: 121256
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000476417
  gene symbol: ITIH5
  hgvsc: ENST00000476417.1:n.5780G>A
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000419386
  ensembl transcript: ENST00000461751
  gene symbol: ITIH5
  hgvsc: ENST00000461751.1:c.*323G>A
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000256861
  ensembl transcript: ENST00000256861
  gene symbol: ITIH5
  hgvsc: ENST00000256861.6:c.1237G>A
  hgvsp: ENSP00000256861.6:p.Glu413Lys
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000387969
  ensembl transcript: ENST00000446830
  gene symbol: ITIH5
  hgvsc: ENST00000446830.2:c.583G>A
  hgvsp: ENSP00000387969.2:p.Glu195Lys
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380333
  ensembl transcript: ENST00000397146
  gene symbol: ITIH5
  hgvsc: ENST00000397146.2:c.1237G>A
  hgvsp: ENSP00000380333.2:p.Glu413Lys
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000434980
  gene symbol: ITIH5
  hgvsc: ENST00000434980.1:n.862G>A
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000298441
  ensembl transcript: ENST00000298441
  gene symbol: ITIH5
  hgvsc: ENST00000298441.6:c.595G>A
  hgvsp: ENSP00000298441.6:p.Glu199Lys
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380332
  ensembl transcript: ENST00000397145
  gene symbol: ITIH5
  hgvsc: ENST00000397145.2:c.1237G>A
  hgvsp: ENSP00000380332.2:p.Glu413Lys
  variant of: http://identifiers.org/hgnc/21449
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1609
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15907
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9904
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31361
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1360
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44170
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Glu413Lys
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff

10-7621902-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7621902
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 7621902
    reference: chr 10
allele count: 10
allele frequency: 8.250280509537324e-5
allele num: 121208
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380332
  ensembl transcript: ENST00000397145
  gene symbol: ITIH5
  hgvsc: ENST00000397145.2:c.1234G>A
  hgvsp: ENSP00000380332.2:p.Gly412Arg
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000298441
  ensembl transcript: ENST00000298441
  gene symbol: ITIH5
  hgvsc: ENST00000298441.6:c.592G>A
  hgvsp: ENSP00000298441.6:p.Gly198Arg
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380333
  ensembl transcript: ENST00000397146
  gene symbol: ITIH5
  hgvsc: ENST00000397146.2:c.1234G>A
  hgvsp: ENSP00000380333.2:p.Gly412Arg
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000256861
  ensembl transcript: ENST00000256861
  gene symbol: ITIH5
  hgvsc: ENST00000256861.6:c.1234G>A
  hgvsp: ENSP00000256861.6:p.Gly412Arg
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000476417
  gene symbol: ITIH5
  hgvsc: ENST00000476417.1:n.5777G>A
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000419386
  ensembl transcript: ENST00000461751
  gene symbol: ITIH5
  hgvsc: ENST00000461751.1:c.*320G>A
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000387969
  ensembl transcript: ENST00000446830
  gene symbol: ITIH5
  hgvsc: ENST00000446830.2:c.580G>A
  hgvsp: ENSP00000387969.2:p.Gly194Arg
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000434980
  gene symbol: ITIH5
  hgvsc: ENST00000434980.1:n.859G>A
  variant of: http://identifiers.org/hgnc/21449
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1604
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31340
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9883
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 15911
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1348
  bin: 9.75e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 999
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8690
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Gly412Arg
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ

10-7621903-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7621903
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 7621903
    reference: chr 10
allele count: 1
allele frequency: 8.249599894405122e-6
allele num: 121218
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000434980
  gene symbol: ITIH5
  hgvsc: ENST00000434980.1:n.858C>T
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000387969
  ensembl transcript: ENST00000446830
  gene symbol: ITIH5
  hgvsc: ENST00000446830.2:c.579C>T
  hgvsp: ENST00000446830.2:c.579C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000256861
  ensembl transcript: ENST00000256861
  gene symbol: ITIH5
  hgvsc: ENST00000256861.6:c.1233C>T
  hgvsp: ENST00000256861.6:c.1233C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000476417
  gene symbol: ITIH5
  hgvsc: ENST00000476417.1:n.5776C>T
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000298441
  ensembl transcript: ENST00000298441
  gene symbol: ITIH5
  hgvsc: ENST00000298441.6:c.591C>T
  hgvsp: ENST00000298441.6:c.591C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000419386
  ensembl transcript: ENST00000461751
  gene symbol: ITIH5
  hgvsc: ENST00000461751.1:c.*319C>T
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380332
  ensembl transcript: ENST00000397145
  gene symbol: ITIH5
  hgvsc: ENST00000397145.2:c.1233C>T
  hgvsp: ENST00000397145.2:c.1233C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380333
  ensembl transcript: ENST00000397146
  gene symbol: ITIH5
  hgvsc: ENST00000397146.2:c.1233C>T
  hgvsp: ENST00000397146.2:c.1233C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15939
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1590
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31350
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9880
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8688
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Val411Val
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
population: Latino
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: MQ

10-7621906-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7621906
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 7621906
    reference: chr 10
allele count: 1
allele frequency: 8.251914444151043e-6
allele num: 121184
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000387969
  ensembl transcript: ENST00000446830
  gene symbol: ITIH5
  hgvsc: ENST00000446830.2:c.576G>A
  hgvsp: ENST00000446830.2:c.576G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000298441
  ensembl transcript: ENST00000298441
  gene symbol: ITIH5
  hgvsc: ENST00000298441.6:c.588G>A
  hgvsp: ENST00000298441.6:c.588G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000434980
  gene symbol: ITIH5
  hgvsc: ENST00000434980.1:n.855G>A
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000256861
  ensembl transcript: ENST00000256861
  gene symbol: ITIH5
  hgvsc: ENST00000256861.6:c.1230G>A
  hgvsp: ENST00000256861.6:c.1230G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000419386
  ensembl transcript: ENST00000461751
  gene symbol: ITIH5
  hgvsc: ENST00000461751.1:c.*316G>A
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380332
  ensembl transcript: ENST00000397145
  gene symbol: ITIH5
  hgvsc: ENST00000397145.2:c.1230G>A
  hgvsp: ENST00000397145.2:c.1230G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380333
  ensembl transcript: ENST00000397146
  gene symbol: ITIH5
  hgvsc: ENST00000397146.2:c.1230G>A
  hgvsp: ENST00000397146.2:c.1230G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000476417
  gene symbol: ITIH5
  hgvsc: ENST00000476417.1:n.5773G>A
  variant of: http://identifiers.org/hgnc/21449
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15982
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31309
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9850
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1582
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8662
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44162
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Thr410Thr
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD

10-7621907-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7621907
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 7621907
    reference: chr 10
allele count: 2
allele frequency: 1.650410126916539e-5
allele num: 121182
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000434980
  gene symbol: ITIH5
  hgvsc: ENST00000434980.1:n.854C>T
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000419386
  ensembl transcript: ENST00000461751
  gene symbol: ITIH5
  hgvsc: ENST00000461751.1:c.*315C>T
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000387969
  ensembl transcript: ENST00000446830
  gene symbol: ITIH5
  hgvsc: ENST00000446830.2:c.575C>T
  hgvsp: ENSP00000387969.2:p.Thr192Met
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000256861
  ensembl transcript: ENST00000256861
  gene symbol: ITIH5
  hgvsc: ENST00000256861.6:c.1229C>T
  hgvsp: ENSP00000256861.6:p.Thr410Met
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380332
  ensembl transcript: ENST00000397145
  gene symbol: ITIH5
  hgvsc: ENST00000397145.2:c.1229C>T
  hgvsp: ENSP00000380332.2:p.Thr410Met
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000298441
  ensembl transcript: ENST00000298441
  gene symbol: ITIH5
  hgvsc: ENST00000298441.6:c.587C>T
  hgvsp: ENSP00000298441.6:p.Thr196Met
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380333
  ensembl transcript: ENST00000397146
  gene symbol: ITIH5
  hgvsc: ENST00000397146.2:c.1229C>T
  hgvsp: ENSP00000380333.2:p.Thr410Met
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000476417
  gene symbol: ITIH5
  hgvsc: ENST00000476417.1:n.5772C>T
  variant of: http://identifiers.org/hgnc/21449
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15991
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9833
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1580
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31320
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2197
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 353
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Thr410Met
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ

10-7621911-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7621911
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 7621911
    reference: chr 10
allele count: 1
allele frequency: 8.256274768824306e-6
allele num: 121120
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380333
  ensembl transcript: ENST00000397146
  gene symbol: ITIH5
  hgvsc: ENST00000397146.2:c.1225C>A
  hgvsp: ENSP00000380333.2:p.Pro409Thr
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000298441
  ensembl transcript: ENST00000298441
  gene symbol: ITIH5
  hgvsc: ENST00000298441.6:c.583C>A
  hgvsp: ENSP00000298441.6:p.Pro195Thr
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000434980
  gene symbol: ITIH5
  hgvsc: ENST00000434980.1:n.850C>A
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000419386
  ensembl transcript: ENST00000461751
  gene symbol: ITIH5
  hgvsc: ENST00000461751.1:c.*311C>A
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380332
  ensembl transcript: ENST00000397145
  gene symbol: ITIH5
  hgvsc: ENST00000397145.2:c.1225C>A
  hgvsp: ENSP00000380332.2:p.Pro409Thr
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000476417
  gene symbol: ITIH5
  hgvsc: ENST00000476417.1:n.5768C>A
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000387969
  ensembl transcript: ENST00000446830
  gene symbol: ITIH5
  hgvsc: ENST00000446830.2:c.571C>A
  hgvsp: ENSP00000387969.2:p.Pro191Thr
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000256861
  ensembl transcript: ENST00000256861
  gene symbol: ITIH5
  hgvsc: ENST00000256861.6:c.1225C>A
  hgvsp: ENSP00000256861.6:p.Pro409Thr
  variant of: http://identifiers.org/hgnc/21449
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1573
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31289
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15997
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9789
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8643
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 277
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 351
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Pro409Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: Other
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum

10-7621922-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7621922
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 7621922
    reference: chr 10
allele count: 5
allele frequency: 4.14236479321315e-5
allele num: 120704
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000256861
  ensembl transcript: ENST00000256861
  gene symbol: ITIH5
  hgvsc: ENST00000256861.6:c.1214C>T
  hgvsp: ENSP00000256861.6:p.Thr405Met
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380332
  ensembl transcript: ENST00000397145
  gene symbol: ITIH5
  hgvsc: ENST00000397145.2:c.1214C>T
  hgvsp: ENSP00000380332.2:p.Thr405Met
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380333
  ensembl transcript: ENST00000397146
  gene symbol: ITIH5
  hgvsc: ENST00000397146.2:c.1214C>T
  hgvsp: ENSP00000380333.2:p.Thr405Met
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000419386
  ensembl transcript: ENST00000461751
  gene symbol: ITIH5
  hgvsc: ENST00000461751.1:c.*300C>T
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000298441
  ensembl transcript: ENST00000298441
  gene symbol: ITIH5
  hgvsc: ENST00000298441.6:c.572C>T
  hgvsp: ENSP00000298441.6:p.Thr191Met
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000387969
  ensembl transcript: ENST00000446830
  gene symbol: ITIH5
  hgvsc: ENST00000446830.2:c.560C>T
  hgvsp: ENSP00000387969.2:p.Thr187Met
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000434980
  gene symbol: ITIH5
  hgvsc: ENST00000434980.1:n.839C>T
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000476417
  gene symbol: ITIH5
  hgvsc: ENST00000476417.1:n.5757C>T
  variant of: http://identifiers.org/hgnc/21449
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31067
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1520
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15972
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9564
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 935
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43835
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8493
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Thr405Met
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: Other
population: European (Finnish)
reference allele: G
site quality: DP
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff

10-7621932-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7621932
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 7621932
    reference: chr 10
allele count: 2
allele frequency: 1.669058984544514e-5
allele num: 119828
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000387969
  ensembl transcript: ENST00000446830
  gene symbol: ITIH5
  hgvsc: ENST00000446830.2:c.550G>A
  hgvsp: ENSP00000387969.2:p.Val184Ile
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000419386
  ensembl transcript: ENST00000461751
  gene symbol: ITIH5
  hgvsc: ENST00000461751.1:c.*290G>A
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000298441
  ensembl transcript: ENST00000298441
  gene symbol: ITIH5
  hgvsc: ENST00000298441.6:c.562G>A
  hgvsp: ENSP00000298441.6:p.Val188Ile
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000476417
  gene symbol: ITIH5
  hgvsc: ENST00000476417.1:n.5747G>A
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380332
  ensembl transcript: ENST00000397145
  gene symbol: ITIH5
  hgvsc: ENST00000397145.2:c.1204G>A
  hgvsp: ENSP00000380332.2:p.Val402Ile
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380333
  ensembl transcript: ENST00000397146
  gene symbol: ITIH5
  hgvsc: ENST00000397146.2:c.1204G>A
  hgvsp: ENSP00000380333.2:p.Val402Ile
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000434980
  gene symbol: ITIH5
  hgvsc: ENST00000434980.1:n.829G>A
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000256861
  ensembl transcript: ENST00000256861
  gene symbol: ITIH5
  hgvsc: ENST00000256861.6:c.1204G>A
  hgvsp: ENSP00000256861.6:p.Val402Ile
  variant of: http://identifiers.org/hgnc/21449
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16230
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 769
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 955
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30394
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8949
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1375
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42784
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1289
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 255
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1406
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Val402Ile
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP

10-7621933-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7621933
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 7621933
    reference: chr 10
allele count: 1
allele frequency: 8.345712807330875e-6
allele num: 119822
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000256861
  ensembl transcript: ENST00000256861
  gene symbol: ITIH5
  hgvsc: ENST00000256861.6:c.1203C>T
  hgvsp: ENST00000256861.6:c.1203C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000387969
  ensembl transcript: ENST00000446830
  gene symbol: ITIH5
  hgvsc: ENST00000446830.2:c.549C>T
  hgvsp: ENST00000446830.2:c.549C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000476417
  gene symbol: ITIH5
  hgvsc: ENST00000476417.1:n.5746C>T
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000419386
  ensembl transcript: ENST00000461751
  gene symbol: ITIH5
  hgvsc: ENST00000461751.1:c.*289C>T
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380332
  ensembl transcript: ENST00000397145
  gene symbol: ITIH5
  hgvsc: ENST00000397145.2:c.1203C>T
  hgvsp: ENST00000397145.2:c.1203C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380333
  ensembl transcript: ENST00000397146
  gene symbol: ITIH5
  hgvsc: ENST00000397146.2:c.1203C>T
  hgvsp: ENST00000397146.2:c.1203C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000298441
  ensembl transcript: ENST00000298441
  gene symbol: ITIH5
  hgvsc: ENST00000298441.6:c.561C>T
  hgvsp: ENST00000298441.6:c.561C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000434980
  gene symbol: ITIH5
  hgvsc: ENST00000434980.1:n.828C>T
  variant of: http://identifiers.org/hgnc/21449
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 779
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16302
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1354
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8887
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30411
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 243
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1421
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1283
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2033
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ile401Ile
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum

10-7621936-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7621936
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 7621936
    reference: chr 10
allele count: 1
allele frequency: 8.381105635455429e-6
allele num: 119316
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000419386
  ensembl transcript: ENST00000461751
  gene symbol: ITIH5
  hgvsc: ENST00000461751.1:c.*286C>G
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000434980
  gene symbol: ITIH5
  hgvsc: ENST00000434980.1:n.825C>G
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380332
  ensembl transcript: ENST00000397145
  gene symbol: ITIH5
  hgvsc: ENST00000397145.2:c.1200C>G
  hgvsp: ENST00000397145.2:c.1200C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000476417
  gene symbol: ITIH5
  hgvsc: ENST00000476417.1:n.5743C>G
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000256861
  ensembl transcript: ENST00000256861
  gene symbol: ITIH5
  hgvsc: ENST00000256861.6:c.1200C>G
  hgvsp: ENST00000256861.6:c.1200C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380333
  ensembl transcript: ENST00000397146
  gene symbol: ITIH5
  hgvsc: ENST00000397146.2:c.1200C>G
  hgvsp: ENST00000397146.2:c.1200C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000387969
  ensembl transcript: ENST00000446830
  gene symbol: ITIH5
  hgvsc: ENST00000446830.2:c.546C>G
  hgvsp: ENST00000446830.2:c.546C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000298441
  ensembl transcript: ENST00000298441
  gene symbol: ITIH5
  hgvsc: ENST00000298441.6:c.558C>G
  hgvsp: ENST00000298441.6:c.558C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1272
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1032
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8683
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29951
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16319
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1319
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 306
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7984
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 245
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1867
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Leu400Leu
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
reference allele: G
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP

10-7621944-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7621944
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 7621944
    reference: chr 10
allele count: 2
allele frequency: 1.69848495142333e-5
allele num: 117752
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000387969
  ensembl transcript: ENST00000446830
  gene symbol: ITIH5
  hgvsc: ENST00000446830.2:c.538G>A
  hgvsp: ENSP00000387969.2:p.Val180Met
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380333
  ensembl transcript: ENST00000397146
  gene symbol: ITIH5
  hgvsc: ENST00000397146.2:c.1192G>A
  hgvsp: ENSP00000380333.2:p.Val398Met
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380332
  ensembl transcript: ENST00000397145
  gene symbol: ITIH5
  hgvsc: ENST00000397145.2:c.1192G>A
  hgvsp: ENSP00000380332.2:p.Val398Met
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000298441
  ensembl transcript: ENST00000298441
  gene symbol: ITIH5
  hgvsc: ENST00000298441.6:c.550G>A
  hgvsp: ENSP00000298441.6:p.Val184Met
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000419386
  ensembl transcript: ENST00000461751
  gene symbol: ITIH5
  hgvsc: ENST00000461751.1:c.*278G>A
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000256861
  ensembl transcript: ENST00000256861
  gene symbol: ITIH5
  hgvsc: ENST00000256861.6:c.1192G>A
  hgvsp: ENSP00000256861.6:p.Val398Met
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000476417
  gene symbol: ITIH5
  hgvsc: ENST00000476417.1:n.5735G>A
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000434980
  gene symbol: ITIH5
  hgvsc: ENST00000434980.1:n.817G>A
  variant of: http://identifiers.org/hgnc/21449
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16745
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1017
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28472
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2365
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7577
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1792
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1173
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1873
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 295
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 611
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 436
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 376
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3364
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Val398Met
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ

10-7621945-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7621945
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 7621945
    reference: chr 10
allele count: 6
allele frequency: 5.104297818763399e-5
allele num: 117548
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000256861
  ensembl transcript: ENST00000256861
  gene symbol: ITIH5
  hgvsc: ENST00000256861.6:c.1191C>T
  hgvsp: ENST00000256861.6:c.1191C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380333
  ensembl transcript: ENST00000397146
  gene symbol: ITIH5
  hgvsc: ENST00000397146.2:c.1191C>T
  hgvsp: ENST00000397146.2:c.1191C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000434980
  gene symbol: ITIH5
  hgvsc: ENST00000434980.1:n.816C>T
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000476417
  gene symbol: ITIH5
  hgvsc: ENST00000476417.1:n.5734C>T
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380332
  ensembl transcript: ENST00000397145
  gene symbol: ITIH5
  hgvsc: ENST00000397145.2:c.1191C>T
  hgvsp: ENST00000397145.2:c.1191C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000387969
  ensembl transcript: ENST00000446830
  gene symbol: ITIH5
  hgvsc: ENST00000446830.2:c.537C>T
  hgvsp: ENST00000446830.2:c.537C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000419386
  ensembl transcript: ENST00000461751
  gene symbol: ITIH5
  hgvsc: ENST00000461751.1:c.*277C>T
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000298441
  ensembl transcript: ENST00000298441
  gene symbol: ITIH5
  hgvsc: ENST00000298441.6:c.549C>T
  hgvsp: ENST00000298441.6:c.549C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1878
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28293
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1054
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7405
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16882
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1147
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2488
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40223
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3530
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 614
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 290
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 242
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ser397Ser
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD

10-7621949-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7621949
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 7621949
    reference: chr 10
allele count: 1
allele frequency: 8.561937052638789e-6
allele num: 116796
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380332
  ensembl transcript: ENST00000397145
  gene symbol: ITIH5
  hgvsc: ENST00000397145.2:c.1187G>A
  hgvsp: ENSP00000380332.2:p.Arg396Gln
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000298441
  ensembl transcript: ENST00000298441
  gene symbol: ITIH5
  hgvsc: ENST00000298441.6:c.545G>A
  hgvsp: ENSP00000298441.6:p.Arg182Gln
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000434980
  gene symbol: ITIH5
  hgvsc: ENST00000434980.1:n.812G>A
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000256861
  ensembl transcript: ENST00000256861
  gene symbol: ITIH5
  hgvsc: ENST00000256861.6:c.1187G>A
  hgvsp: ENSP00000256861.6:p.Arg396Gln
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000387969
  ensembl transcript: ENST00000446830
  gene symbol: ITIH5
  hgvsc: ENST00000446830.2:c.533G>A
  hgvsp: ENSP00000387969.2:p.Arg178Gln
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380333
  ensembl transcript: ENST00000397146
  gene symbol: ITIH5
  hgvsc: ENST00000397146.2:c.1187G>A
  hgvsp: ENSP00000380333.2:p.Arg396Gln
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000419386
  ensembl transcript: ENST00000461751
  gene symbol: ITIH5
  hgvsc: ENST00000461751.1:c.*273G>A
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000476417
  gene symbol: ITIH5
  hgvsc: ENST00000476417.1:n.5730G>A
  variant of: http://identifiers.org/hgnc/21449
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1107
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17309
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2953
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2236
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27409
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1206
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6936
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1814
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 779
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1758
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 671
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4180
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Arg396Gln
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum

10-7621950-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7621950
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 7621950
    reference: chr 10
allele count: 6
allele frequency: 5.156677037317153e-5
allele num: 116354
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000298441
  ensembl transcript: ENST00000298441
  gene symbol: ITIH5
  hgvsc: ENST00000298441.6:c.544C>T
  hgvsp: ENSP00000298441.6:p.Arg182Trp
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380332
  ensembl transcript: ENST00000397145
  gene symbol: ITIH5
  hgvsc: ENST00000397145.2:c.1186C>T
  hgvsp: ENSP00000380332.2:p.Arg396Trp
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000434980
  gene symbol: ITIH5
  hgvsc: ENST00000434980.1:n.811C>T
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000387969
  ensembl transcript: ENST00000446830
  gene symbol: ITIH5
  hgvsc: ENST00000446830.2:c.532C>T
  hgvsp: ENSP00000387969.2:p.Arg178Trp
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000476417
  gene symbol: ITIH5
  hgvsc: ENST00000476417.1:n.5729C>T
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380333
  ensembl transcript: ENST00000397146
  gene symbol: ITIH5
  hgvsc: ENST00000397146.2:c.1186C>T
  hgvsp: ENSP00000380333.2:p.Arg396Trp
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000256861
  ensembl transcript: ENST00000256861
  gene symbol: ITIH5
  hgvsc: ENST00000256861.6:c.1186C>T
  hgvsp: ENSP00000256861.6:p.Arg396Trp
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000419386
  ensembl transcript: ENST00000461751
  gene symbol: ITIH5
  hgvsc: ENST00000461751.1:c.*272C>T
  variant of: http://identifiers.org/hgnc/21449
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1076
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2461
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3264
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1313
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26904
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17531
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6618
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 471
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 756
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 759
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 718
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 234
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Arg396Trp
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD

10-7621950-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7621950
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 7621950
    reference: chr 10
allele count: 1
allele frequency: 8.594461728861921e-6
allele num: 116354
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000298441
  ensembl transcript: ENST00000298441
  gene symbol: ITIH5
  hgvsc: ENST00000298441.6:c.544C>G
  hgvsp: ENSP00000298441.6:p.Arg182Gly
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380332
  ensembl transcript: ENST00000397145
  gene symbol: ITIH5
  hgvsc: ENST00000397145.2:c.1186C>G
  hgvsp: ENSP00000380332.2:p.Arg396Gly
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000256861
  ensembl transcript: ENST00000256861
  gene symbol: ITIH5
  hgvsc: ENST00000256861.6:c.1186C>G
  hgvsp: ENSP00000256861.6:p.Arg396Gly
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380333
  ensembl transcript: ENST00000397146
  gene symbol: ITIH5
  hgvsc: ENST00000397146.2:c.1186C>G
  hgvsp: ENSP00000380333.2:p.Arg396Gly
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000434980
  gene symbol: ITIH5
  hgvsc: ENST00000434980.1:n.811C>G
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000387969
  ensembl transcript: ENST00000446830
  gene symbol: ITIH5
  hgvsc: ENST00000446830.2:c.532C>G
  hgvsp: ENSP00000387969.2:p.Arg178Gly
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000419386
  ensembl transcript: ENST00000461751
  gene symbol: ITIH5
  hgvsc: ENST00000461751.1:c.*272C>G
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000476417
  gene symbol: ITIH5
  hgvsc: ENST00000476417.1:n.5729C>G
  variant of: http://identifiers.org/hgnc/21449
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26904
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17531
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1076
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3264
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2461
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6618
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1313
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 471
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 837
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4621
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 756
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Arg396Gly
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum

10-7621950-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7621950
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 7621950
    reference: chr 10
allele count: 2
allele frequency: 1.718892345772384e-5
allele num: 116354
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000298441
  ensembl transcript: ENST00000298441
  gene symbol: ITIH5
  hgvsc: ENST00000298441.6:c.544C>A
  hgvsp: ENST00000298441.6:c.544C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000387969
  ensembl transcript: ENST00000446830
  gene symbol: ITIH5
  hgvsc: ENST00000446830.2:c.532C>A
  hgvsp: ENST00000446830.2:c.532C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000419386
  ensembl transcript: ENST00000461751
  gene symbol: ITIH5
  hgvsc: ENST00000461751.1:c.*272C>A
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380333
  ensembl transcript: ENST00000397146
  gene symbol: ITIH5
  hgvsc: ENST00000397146.2:c.1186C>A
  hgvsp: ENST00000397146.2:c.1186C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000476417
  gene symbol: ITIH5
  hgvsc: ENST00000476417.1:n.5729C>A
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000434980
  gene symbol: ITIH5
  hgvsc: ENST00000434980.1:n.811C>A
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380332
  ensembl transcript: ENST00000397145
  gene symbol: ITIH5
  hgvsc: ENST00000397145.2:c.1186C>A
  hgvsp: ENST00000397145.2:c.1186C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000256861
  ensembl transcript: ENST00000256861
  gene symbol: ITIH5
  hgvsc: ENST00000256861.6:c.1186C>A
  hgvsp: ENST00000256861.6:c.1186C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/21449
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6618
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 245
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3264
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1313
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17531
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2461
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26904
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1076
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 583
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 726
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 471
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 234
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 756
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Arg396Arg
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: MQ

10-7621953-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 7621953
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 7621953
    reference: chr 10
allele count: 1
allele frequency: 8.623514599610217e-6
allele num: 115962
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000419386
  ensembl transcript: ENST00000461751
  gene symbol: ITIH5
  hgvsc: ENST00000461751.1:c.*269G>A
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000434980
  gene symbol: ITIH5
  hgvsc: ENST00000434980.1:n.808G>A
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380333
  ensembl transcript: ENST00000397146
  gene symbol: ITIH5
  hgvsc: ENST00000397146.2:c.1183G>A
  hgvsp: ENSP00000380333.2:p.Asp395Asn
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000387969
  ensembl transcript: ENST00000446830
  gene symbol: ITIH5
  hgvsc: ENST00000446830.2:c.529G>A
  hgvsp: ENSP00000387969.2:p.Asp177Asn
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000380332
  ensembl transcript: ENST00000397145
  gene symbol: ITIH5
  hgvsc: ENST00000397145.2:c.1183G>A
  hgvsp: ENSP00000380332.2:p.Asp395Asn
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000256861
  ensembl transcript: ENST00000256861
  gene symbol: ITIH5
  hgvsc: ENST00000256861.6:c.1183G>A
  hgvsp: ENSP00000256861.6:p.Asp395Asn
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000123243
  ensembl transcript: ENST00000476417
  gene symbol: ITIH5
  hgvsc: ENST00000476417.1:n.5726G>A
  variant of: http://identifiers.org/hgnc/21449
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000123243
  ensembl protein: ENSP00000298441
  ensembl transcript: ENST00000298441
  gene symbol: ITIH5
  hgvsc: ENST00000298441.6:c.541G>A
  hgvsp: ENSP00000298441.6:p.Asp181Asn
  variant of: http://identifiers.org/hgnc/21449
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3525
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1359
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2657
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26494
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6387
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17712
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1044
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 617
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6874
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 270
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 760
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Asp395Asn
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: East Asian
population: Other
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD

5-140867232-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140867232
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140867232
    reference: chr 5
allele count: 3
allele frequency: 3.217020181439939e-5
allele num: 93254
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261934
  ensembl protein: ENSP00000460274
  ensembl transcript: ENST00000573521
  gene symbol: PCDHGA9
  hgvsc: ENST00000573521.1:c.2425-7142G>C
  variant of: http://identifiers.org/hgnc/8707
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253305
  ensembl protein: ENSP00000428603
  ensembl transcript: ENST00000520790
  gene symbol: PCDHGB6
  hgvsc: ENST00000520790.1:c.2419-7142G>C
  variant of: http://identifiers.org/hgnc/8713
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254245
  ensembl protein: ENSP00000253812
  ensembl transcript: ENST00000253812
  gene symbol: PCDHGA3
  hgvsc: ENST00000253812.6:c.2425-7142G>C
  variant of: http://identifiers.org/hgnc/8701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253846
  ensembl protein: ENSP00000381611
  ensembl transcript: ENST00000398610
  gene symbol: PCDHGA10
  hgvsc: ENST00000398610.2:c.2437-7142G>C
  variant of: http://identifiers.org/hgnc/8697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262576
  ensembl protein: ENSP00000458570
  ensembl transcript: ENST00000571252
  gene symbol: PCDHGA4
  hgvsc: ENST00000571252.1:c.2422-7142G>C
  variant of: http://identifiers.org/hgnc/8702
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000428333
  ensembl transcript: ENST00000518882
  gene symbol: PCDHGA11
  hgvsc: ENST00000518882.1:c.1879-7142G>C
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253910
  ensembl protein: ENSP00000429018
  ensembl transcript: ENST00000522605
  gene symbol: PCDHGB2
  hgvsc: ENST00000522605.1:c.2422-7142G>C
  variant of: http://identifiers.org/hgnc/8709
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253485
  ensembl protein: ENSP00000429834
  ensembl transcript: ENST00000518069
  gene symbol: PCDHGA5
  hgvsc: ENST00000518069.1:c.2422-7142G>C
  variant of: http://identifiers.org/hgnc/8703
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204956
  ensembl protein: ENSP00000431083
  ensembl transcript: ENST00000517417
  gene symbol: PCDHGA1
  hgvsc: ENST00000517417.1:c.2422-7142G>C
  variant of: http://identifiers.org/hgnc/8696
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000381589
  ensembl transcript: ENST00000398587
  gene symbol: PCDHGA11
  hgvsc: ENST00000398587.2:c.2434-7142G>C
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253953
  ensembl protein: ENSP00000428288
  ensembl transcript: ENST00000519479
  gene symbol: PCDHGB4
  hgvsc: ENST00000519479.1:c.2398-7142G>C
  variant of: http://identifiers.org/hgnc/8711
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262209
  ensembl protein: ENSP00000461862
  ensembl transcript: ENST00000576222
  gene symbol: PCDHGB3
  hgvsc: ENST00000576222.1:c.2416-7142G>C
  variant of: http://identifiers.org/hgnc/8710
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253537
  ensembl protein: ENSP00000430024
  ensembl transcript: ENST00000518325
  gene symbol: PCDHGA7
  hgvsc: ENST00000518325.1:c.2425-7142G>C
  variant of: http://identifiers.org/hgnc/8705
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253767
  ensembl protein: ENSP00000381605
  ensembl transcript: ENST00000398604
  gene symbol: PCDHGA8
  hgvsc: ENST00000398604.2:c.2425-7142G>C
  variant of: http://identifiers.org/hgnc/8706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253159
  ensembl protein: ENSP00000252085
  ensembl transcript: ENST00000252085
  gene symbol: PCDHGA12
  hgvsc: ENST00000252085.3:c.2425-7142G>C
  variant of: http://identifiers.org/hgnc/8699
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254221
  ensembl protein: ENSP00000429273
  ensembl transcript: ENST00000523390
  gene symbol: PCDHGB1
  hgvsc: ENST00000523390.1:c.2410-7142G>C
  variant of: http://identifiers.org/hgnc/8708
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000242419
  ensembl protein: ENSP00000306918
  ensembl transcript: ENST00000306593
  gene symbol: PCDHGC4
  hgvsc: ENST00000306593.1:c.2442+50G>C
  variant of: http://identifiers.org/hgnc/8717
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254122
  ensembl protein: ENSP00000381594
  ensembl transcript: ENST00000398594
  gene symbol: PCDHGB7
  hgvsc: ENST00000398594.2:c.2416-7142G>C
  variant of: http://identifiers.org/hgnc/8714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253731
  ensembl protein: ENSP00000429601
  ensembl transcript: ENST00000517434
  gene symbol: PCDHGA6
  hgvsc: ENST00000517434.1:c.2425-7142G>C
  variant of: http://identifiers.org/hgnc/8704
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000240184
  ensembl protein: ENSP00000312070
  ensembl transcript: ENST00000308177
  gene symbol: PCDHGC3
  hgvsc: ENST00000308177.3:c.2431-7142G>C
  variant of: http://identifiers.org/hgnc/8716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081853
  ensembl protein: ENSP00000378077
  ensembl transcript: ENST00000394576
  gene symbol: PCDHGA2
  hgvsc: ENST00000394576.2:c.2425-7142G>C
  variant of: http://identifiers.org/hgnc/8700
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum

5-140867232-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140867232
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140867232
    reference: chr 5
allele count: 5
allele frequency: 5.361700302399897e-5
allele num: 93254
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262576
  ensembl protein: ENSP00000458570
  ensembl transcript: ENST00000571252
  gene symbol: PCDHGA4
  hgvsc: ENST00000571252.1:c.2422-7142G>T
  variant of: http://identifiers.org/hgnc/8702
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253305
  ensembl protein: ENSP00000428603
  ensembl transcript: ENST00000520790
  gene symbol: PCDHGB6
  hgvsc: ENST00000520790.1:c.2419-7142G>T
  variant of: http://identifiers.org/hgnc/8713
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204956
  ensembl protein: ENSP00000431083
  ensembl transcript: ENST00000517417
  gene symbol: PCDHGA1
  hgvsc: ENST00000517417.1:c.2422-7142G>T
  variant of: http://identifiers.org/hgnc/8696
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253846
  ensembl protein: ENSP00000381611
  ensembl transcript: ENST00000398610
  gene symbol: PCDHGA10
  hgvsc: ENST00000398610.2:c.2437-7142G>T
  variant of: http://identifiers.org/hgnc/8697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000242419
  ensembl protein: ENSP00000306918
  ensembl transcript: ENST00000306593
  gene symbol: PCDHGC4
  hgvsc: ENST00000306593.1:c.2442+50G>T
  variant of: http://identifiers.org/hgnc/8717
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000428333
  ensembl transcript: ENST00000518882
  gene symbol: PCDHGA11
  hgvsc: ENST00000518882.1:c.1879-7142G>T
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254245
  ensembl protein: ENSP00000253812
  ensembl transcript: ENST00000253812
  gene symbol: PCDHGA3
  hgvsc: ENST00000253812.6:c.2425-7142G>T
  variant of: http://identifiers.org/hgnc/8701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253485
  ensembl protein: ENSP00000429834
  ensembl transcript: ENST00000518069
  gene symbol: PCDHGA5
  hgvsc: ENST00000518069.1:c.2422-7142G>T
  variant of: http://identifiers.org/hgnc/8703
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261934
  ensembl protein: ENSP00000460274
  ensembl transcript: ENST00000573521
  gene symbol: PCDHGA9
  hgvsc: ENST00000573521.1:c.2425-7142G>T
  variant of: http://identifiers.org/hgnc/8707
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254221
  ensembl protein: ENSP00000429273
  ensembl transcript: ENST00000523390
  gene symbol: PCDHGB1
  hgvsc: ENST00000523390.1:c.2410-7142G>T
  variant of: http://identifiers.org/hgnc/8708
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253537
  ensembl protein: ENSP00000430024
  ensembl transcript: ENST00000518325
  gene symbol: PCDHGA7
  hgvsc: ENST00000518325.1:c.2425-7142G>T
  variant of: http://identifiers.org/hgnc/8705
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253159
  ensembl protein: ENSP00000252085
  ensembl transcript: ENST00000252085
  gene symbol: PCDHGA12
  hgvsc: ENST00000252085.3:c.2425-7142G>T
  variant of: http://identifiers.org/hgnc/8699
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253731
  ensembl protein: ENSP00000429601
  ensembl transcript: ENST00000517434
  gene symbol: PCDHGA6
  hgvsc: ENST00000517434.1:c.2425-7142G>T
  variant of: http://identifiers.org/hgnc/8704
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253910
  ensembl protein: ENSP00000429018
  ensembl transcript: ENST00000522605
  gene symbol: PCDHGB2
  hgvsc: ENST00000522605.1:c.2422-7142G>T
  variant of: http://identifiers.org/hgnc/8709
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081853
  ensembl protein: ENSP00000378077
  ensembl transcript: ENST00000394576
  gene symbol: PCDHGA2
  hgvsc: ENST00000394576.2:c.2425-7142G>T
  variant of: http://identifiers.org/hgnc/8700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000240184
  ensembl protein: ENSP00000312070
  ensembl transcript: ENST00000308177
  gene symbol: PCDHGC3
  hgvsc: ENST00000308177.3:c.2431-7142G>T
  variant of: http://identifiers.org/hgnc/8716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262209
  ensembl protein: ENSP00000461862
  ensembl transcript: ENST00000576222
  gene symbol: PCDHGB3
  hgvsc: ENST00000576222.1:c.2416-7142G>T
  variant of: http://identifiers.org/hgnc/8710
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254122
  ensembl protein: ENSP00000381594
  ensembl transcript: ENST00000398594
  gene symbol: PCDHGB7
  hgvsc: ENST00000398594.2:c.2416-7142G>T
  variant of: http://identifiers.org/hgnc/8714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253767
  ensembl protein: ENSP00000381605
  ensembl transcript: ENST00000398604
  gene symbol: PCDHGA8
  hgvsc: ENST00000398604.2:c.2425-7142G>T
  variant of: http://identifiers.org/hgnc/8706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253953
  ensembl protein: ENSP00000428288
  ensembl transcript: ENST00000519479
  gene symbol: PCDHGB4
  hgvsc: ENST00000519479.1:c.2398-7142G>T
  variant of: http://identifiers.org/hgnc/8711
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000381589
  ensembl transcript: ENST00000398587
  gene symbol: PCDHGA11
  hgvsc: ENST00000398587.2:c.2434-7142G>T
  variant of: http://identifiers.org/hgnc/8698
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: South Asian
population: African
reference allele: G
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum

5-140867235-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140867235
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140867235
    reference: chr 5
allele count: 1
allele frequency: 1.114678080970216e-5
allele num: 89712
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253846
  ensembl protein: ENSP00000381611
  ensembl transcript: ENST00000398610
  gene symbol: PCDHGA10
  hgvsc: ENST00000398610.2:c.2437-7139T>C
  variant of: http://identifiers.org/hgnc/8697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000381589
  ensembl transcript: ENST00000398587
  gene symbol: PCDHGA11
  hgvsc: ENST00000398587.2:c.2434-7139T>C
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254122
  ensembl protein: ENSP00000381594
  ensembl transcript: ENST00000398594
  gene symbol: PCDHGB7
  hgvsc: ENST00000398594.2:c.2416-7139T>C
  variant of: http://identifiers.org/hgnc/8714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204956
  ensembl protein: ENSP00000431083
  ensembl transcript: ENST00000517417
  gene symbol: PCDHGA1
  hgvsc: ENST00000517417.1:c.2422-7139T>C
  variant of: http://identifiers.org/hgnc/8696
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253485
  ensembl protein: ENSP00000429834
  ensembl transcript: ENST00000518069
  gene symbol: PCDHGA5
  hgvsc: ENST00000518069.1:c.2422-7139T>C
  variant of: http://identifiers.org/hgnc/8703
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262576
  ensembl protein: ENSP00000458570
  ensembl transcript: ENST00000571252
  gene symbol: PCDHGA4
  hgvsc: ENST00000571252.1:c.2422-7139T>C
  variant of: http://identifiers.org/hgnc/8702
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253910
  ensembl protein: ENSP00000429018
  ensembl transcript: ENST00000522605
  gene symbol: PCDHGB2
  hgvsc: ENST00000522605.1:c.2422-7139T>C
  variant of: http://identifiers.org/hgnc/8709
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253159
  ensembl protein: ENSP00000252085
  ensembl transcript: ENST00000252085
  gene symbol: PCDHGA12
  hgvsc: ENST00000252085.3:c.2425-7139T>C
  variant of: http://identifiers.org/hgnc/8699
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000240184
  ensembl protein: ENSP00000312070
  ensembl transcript: ENST00000308177
  gene symbol: PCDHGC3
  hgvsc: ENST00000308177.3:c.2431-7139T>C
  variant of: http://identifiers.org/hgnc/8716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254245
  ensembl protein: ENSP00000253812
  ensembl transcript: ENST00000253812
  gene symbol: PCDHGA3
  hgvsc: ENST00000253812.6:c.2425-7139T>C
  variant of: http://identifiers.org/hgnc/8701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261934
  ensembl protein: ENSP00000460274
  ensembl transcript: ENST00000573521
  gene symbol: PCDHGA9
  hgvsc: ENST00000573521.1:c.2425-7139T>C
  variant of: http://identifiers.org/hgnc/8707
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254221
  ensembl protein: ENSP00000429273
  ensembl transcript: ENST00000523390
  gene symbol: PCDHGB1
  hgvsc: ENST00000523390.1:c.2410-7139T>C
  variant of: http://identifiers.org/hgnc/8708
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253767
  ensembl protein: ENSP00000381605
  ensembl transcript: ENST00000398604
  gene symbol: PCDHGA8
  hgvsc: ENST00000398604.2:c.2425-7139T>C
  variant of: http://identifiers.org/hgnc/8706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253537
  ensembl protein: ENSP00000430024
  ensembl transcript: ENST00000518325
  gene symbol: PCDHGA7
  hgvsc: ENST00000518325.1:c.2425-7139T>C
  variant of: http://identifiers.org/hgnc/8705
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081853
  ensembl protein: ENSP00000378077
  ensembl transcript: ENST00000394576
  gene symbol: PCDHGA2
  hgvsc: ENST00000394576.2:c.2425-7139T>C
  variant of: http://identifiers.org/hgnc/8700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000242419
  ensembl protein: ENSP00000306918
  ensembl transcript: ENST00000306593
  gene symbol: PCDHGC4
  hgvsc: ENST00000306593.1:c.2442+53T>C
  variant of: http://identifiers.org/hgnc/8717
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262209
  ensembl protein: ENSP00000461862
  ensembl transcript: ENST00000576222
  gene symbol: PCDHGB3
  hgvsc: ENST00000576222.1:c.2416-7139T>C
  variant of: http://identifiers.org/hgnc/8710
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253731
  ensembl protein: ENSP00000429601
  ensembl transcript: ENST00000517434
  gene symbol: PCDHGA6
  hgvsc: ENST00000517434.1:c.2425-7139T>C
  variant of: http://identifiers.org/hgnc/8704
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000428333
  ensembl transcript: ENST00000518882
  gene symbol: PCDHGA11
  hgvsc: ENST00000518882.1:c.1879-7139T>C
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253305
  ensembl protein: ENSP00000428603
  ensembl transcript: ENST00000520790
  gene symbol: PCDHGB6
  hgvsc: ENST00000520790.1:c.2419-7139T>C
  variant of: http://identifiers.org/hgnc/8713
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253953
  ensembl protein: ENSP00000428288
  ensembl transcript: ENST00000519479
  gene symbol: PCDHGB4
  hgvsc: ENST00000519479.1:c.2398-7139T>C
  variant of: http://identifiers.org/hgnc/8711
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum

5-140867242-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140867242
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140867242
    reference: chr 5
allele count: 1
allele frequency: 1.218828462082247e-5
allele num: 82046
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262209
  ensembl protein: ENSP00000461862
  ensembl transcript: ENST00000576222
  gene symbol: PCDHGB3
  hgvsc: ENST00000576222.1:c.2416-7132A>G
  variant of: http://identifiers.org/hgnc/8710
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253159
  ensembl protein: ENSP00000252085
  ensembl transcript: ENST00000252085
  gene symbol: PCDHGA12
  hgvsc: ENST00000252085.3:c.2425-7132A>G
  variant of: http://identifiers.org/hgnc/8699
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204956
  ensembl protein: ENSP00000431083
  ensembl transcript: ENST00000517417
  gene symbol: PCDHGA1
  hgvsc: ENST00000517417.1:c.2422-7132A>G
  variant of: http://identifiers.org/hgnc/8696
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253485
  ensembl protein: ENSP00000429834
  ensembl transcript: ENST00000518069
  gene symbol: PCDHGA5
  hgvsc: ENST00000518069.1:c.2422-7132A>G
  variant of: http://identifiers.org/hgnc/8703
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000381589
  ensembl transcript: ENST00000398587
  gene symbol: PCDHGA11
  hgvsc: ENST00000398587.2:c.2434-7132A>G
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000242419
  ensembl protein: ENSP00000306918
  ensembl transcript: ENST00000306593
  gene symbol: PCDHGC4
  hgvsc: ENST00000306593.1:c.2442+60A>G
  variant of: http://identifiers.org/hgnc/8717
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253910
  ensembl protein: ENSP00000429018
  ensembl transcript: ENST00000522605
  gene symbol: PCDHGB2
  hgvsc: ENST00000522605.1:c.2422-7132A>G
  variant of: http://identifiers.org/hgnc/8709
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253305
  ensembl protein: ENSP00000428603
  ensembl transcript: ENST00000520790
  gene symbol: PCDHGB6
  hgvsc: ENST00000520790.1:c.2419-7132A>G
  variant of: http://identifiers.org/hgnc/8713
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254221
  ensembl protein: ENSP00000429273
  ensembl transcript: ENST00000523390
  gene symbol: PCDHGB1
  hgvsc: ENST00000523390.1:c.2410-7132A>G
  variant of: http://identifiers.org/hgnc/8708
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253953
  ensembl protein: ENSP00000428288
  ensembl transcript: ENST00000519479
  gene symbol: PCDHGB4
  hgvsc: ENST00000519479.1:c.2398-7132A>G
  variant of: http://identifiers.org/hgnc/8711
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000240184
  ensembl protein: ENSP00000312070
  ensembl transcript: ENST00000308177
  gene symbol: PCDHGC3
  hgvsc: ENST00000308177.3:c.2431-7132A>G
  variant of: http://identifiers.org/hgnc/8716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254245
  ensembl protein: ENSP00000253812
  ensembl transcript: ENST00000253812
  gene symbol: PCDHGA3
  hgvsc: ENST00000253812.6:c.2425-7132A>G
  variant of: http://identifiers.org/hgnc/8701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253731
  ensembl protein: ENSP00000429601
  ensembl transcript: ENST00000517434
  gene symbol: PCDHGA6
  hgvsc: ENST00000517434.1:c.2425-7132A>G
  variant of: http://identifiers.org/hgnc/8704
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081853
  ensembl protein: ENSP00000378077
  ensembl transcript: ENST00000394576
  gene symbol: PCDHGA2
  hgvsc: ENST00000394576.2:c.2425-7132A>G
  variant of: http://identifiers.org/hgnc/8700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253846
  ensembl protein: ENSP00000381611
  ensembl transcript: ENST00000398610
  gene symbol: PCDHGA10
  hgvsc: ENST00000398610.2:c.2437-7132A>G
  variant of: http://identifiers.org/hgnc/8697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261934
  ensembl protein: ENSP00000460274
  ensembl transcript: ENST00000573521
  gene symbol: PCDHGA9
  hgvsc: ENST00000573521.1:c.2425-7132A>G
  variant of: http://identifiers.org/hgnc/8707
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253537
  ensembl protein: ENSP00000430024
  ensembl transcript: ENST00000518325
  gene symbol: PCDHGA7
  hgvsc: ENST00000518325.1:c.2425-7132A>G
  variant of: http://identifiers.org/hgnc/8705
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000428333
  ensembl transcript: ENST00000518882
  gene symbol: PCDHGA11
  hgvsc: ENST00000518882.1:c.1879-7132A>G
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253767
  ensembl protein: ENSP00000381605
  ensembl transcript: ENST00000398604
  gene symbol: PCDHGA8
  hgvsc: ENST00000398604.2:c.2425-7132A>G
  variant of: http://identifiers.org/hgnc/8706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262576
  ensembl protein: ENSP00000458570
  ensembl transcript: ENST00000571252
  gene symbol: PCDHGA4
  hgvsc: ENST00000571252.1:c.2422-7132A>G
  variant of: http://identifiers.org/hgnc/8702
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254122
  ensembl protein: ENSP00000381594
  ensembl transcript: ENST00000398594
  gene symbol: PCDHGB7
  hgvsc: ENST00000398594.2:c.2416-7132A>G
  variant of: http://identifiers.org/hgnc/8714
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: Other
population: European (Finnish)
reference allele: A
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD

5-140867243-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140867243
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140867243
    reference: chr 5
allele count: 537
allele frequency: 6.696094568307646e-3
allele num: 80196
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262209
  ensembl protein: ENSP00000461862
  ensembl transcript: ENST00000576222
  gene symbol: PCDHGB3
  hgvsc: ENST00000576222.1:c.2416-7131G>A
  variant of: http://identifiers.org/hgnc/8710
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253305
  ensembl protein: ENSP00000428603
  ensembl transcript: ENST00000520790
  gene symbol: PCDHGB6
  hgvsc: ENST00000520790.1:c.2419-7131G>A
  variant of: http://identifiers.org/hgnc/8713
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253910
  ensembl protein: ENSP00000429018
  ensembl transcript: ENST00000522605
  gene symbol: PCDHGB2
  hgvsc: ENST00000522605.1:c.2422-7131G>A
  variant of: http://identifiers.org/hgnc/8709
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204956
  ensembl protein: ENSP00000431083
  ensembl transcript: ENST00000517417
  gene symbol: PCDHGA1
  hgvsc: ENST00000517417.1:c.2422-7131G>A
  variant of: http://identifiers.org/hgnc/8696
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261934
  ensembl protein: ENSP00000460274
  ensembl transcript: ENST00000573521
  gene symbol: PCDHGA9
  hgvsc: ENST00000573521.1:c.2425-7131G>A
  variant of: http://identifiers.org/hgnc/8707
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254122
  ensembl protein: ENSP00000381594
  ensembl transcript: ENST00000398594
  gene symbol: PCDHGB7
  hgvsc: ENST00000398594.2:c.2416-7131G>A
  variant of: http://identifiers.org/hgnc/8714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253537
  ensembl protein: ENSP00000430024
  ensembl transcript: ENST00000518325
  gene symbol: PCDHGA7
  hgvsc: ENST00000518325.1:c.2425-7131G>A
  variant of: http://identifiers.org/hgnc/8705
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253485
  ensembl protein: ENSP00000429834
  ensembl transcript: ENST00000518069
  gene symbol: PCDHGA5
  hgvsc: ENST00000518069.1:c.2422-7131G>A
  variant of: http://identifiers.org/hgnc/8703
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254245
  ensembl protein: ENSP00000253812
  ensembl transcript: ENST00000253812
  gene symbol: PCDHGA3
  hgvsc: ENST00000253812.6:c.2425-7131G>A
  variant of: http://identifiers.org/hgnc/8701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254221
  ensembl protein: ENSP00000429273
  ensembl transcript: ENST00000523390
  gene symbol: PCDHGB1
  hgvsc: ENST00000523390.1:c.2410-7131G>A
  variant of: http://identifiers.org/hgnc/8708
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253846
  ensembl protein: ENSP00000381611
  ensembl transcript: ENST00000398610
  gene symbol: PCDHGA10
  hgvsc: ENST00000398610.2:c.2437-7131G>A
  variant of: http://identifiers.org/hgnc/8697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253159
  ensembl protein: ENSP00000252085
  ensembl transcript: ENST00000252085
  gene symbol: PCDHGA12
  hgvsc: ENST00000252085.3:c.2425-7131G>A
  variant of: http://identifiers.org/hgnc/8699
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262576
  ensembl protein: ENSP00000458570
  ensembl transcript: ENST00000571252
  gene symbol: PCDHGA4
  hgvsc: ENST00000571252.1:c.2422-7131G>A
  variant of: http://identifiers.org/hgnc/8702
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253953
  ensembl protein: ENSP00000428288
  ensembl transcript: ENST00000519479
  gene symbol: PCDHGB4
  hgvsc: ENST00000519479.1:c.2398-7131G>A
  variant of: http://identifiers.org/hgnc/8711
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253767
  ensembl protein: ENSP00000381605
  ensembl transcript: ENST00000398604
  gene symbol: PCDHGA8
  hgvsc: ENST00000398604.2:c.2425-7131G>A
  variant of: http://identifiers.org/hgnc/8706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081853
  ensembl protein: ENSP00000378077
  ensembl transcript: ENST00000394576
  gene symbol: PCDHGA2
  hgvsc: ENST00000394576.2:c.2425-7131G>A
  variant of: http://identifiers.org/hgnc/8700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000381589
  ensembl transcript: ENST00000398587
  gene symbol: PCDHGA11
  hgvsc: ENST00000398587.2:c.2434-7131G>A
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253731
  ensembl protein: ENSP00000429601
  ensembl transcript: ENST00000517434
  gene symbol: PCDHGA6
  hgvsc: ENST00000517434.1:c.2425-7131G>A
  variant of: http://identifiers.org/hgnc/8704
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000242419
  ensembl protein: ENSP00000306918
  ensembl transcript: ENST00000306593
  gene symbol: PCDHGC4
  hgvsc: ENST00000306593.1:c.2442+61G>A
  variant of: http://identifiers.org/hgnc/8717
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000240184
  ensembl protein: ENSP00000312070
  ensembl transcript: ENST00000308177
  gene symbol: PCDHGC3
  hgvsc: ENST00000308177.3:c.2431-7131G>A
  variant of: http://identifiers.org/hgnc/8716
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000428333
  ensembl transcript: ENST00000518882
  gene symbol: PCDHGA11
  hgvsc: ENST00000518882.1:c.1879-7131G>A
  variant of: http://identifiers.org/hgnc/8698
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.90to99.95
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP

5-140867244-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140867244
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140867244
    reference: chr 5
allele count: 1
allele frequency: 1.256533976678729e-5
allele num: 79584
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253485
  ensembl protein: ENSP00000429834
  ensembl transcript: ENST00000518069
  gene symbol: PCDHGA5
  hgvsc: ENST00000518069.1:c.2422-7130G>A
  variant of: http://identifiers.org/hgnc/8703
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000381589
  ensembl transcript: ENST00000398587
  gene symbol: PCDHGA11
  hgvsc: ENST00000398587.2:c.2434-7130G>A
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254245
  ensembl protein: ENSP00000253812
  ensembl transcript: ENST00000253812
  gene symbol: PCDHGA3
  hgvsc: ENST00000253812.6:c.2425-7130G>A
  variant of: http://identifiers.org/hgnc/8701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254122
  ensembl protein: ENSP00000381594
  ensembl transcript: ENST00000398594
  gene symbol: PCDHGB7
  hgvsc: ENST00000398594.2:c.2416-7130G>A
  variant of: http://identifiers.org/hgnc/8714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253846
  ensembl protein: ENSP00000381611
  ensembl transcript: ENST00000398610
  gene symbol: PCDHGA10
  hgvsc: ENST00000398610.2:c.2437-7130G>A
  variant of: http://identifiers.org/hgnc/8697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253305
  ensembl protein: ENSP00000428603
  ensembl transcript: ENST00000520790
  gene symbol: PCDHGB6
  hgvsc: ENST00000520790.1:c.2419-7130G>A
  variant of: http://identifiers.org/hgnc/8713
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204956
  ensembl protein: ENSP00000431083
  ensembl transcript: ENST00000517417
  gene symbol: PCDHGA1
  hgvsc: ENST00000517417.1:c.2422-7130G>A
  variant of: http://identifiers.org/hgnc/8696
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081853
  ensembl protein: ENSP00000378077
  ensembl transcript: ENST00000394576
  gene symbol: PCDHGA2
  hgvsc: ENST00000394576.2:c.2425-7130G>A
  variant of: http://identifiers.org/hgnc/8700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000240184
  ensembl protein: ENSP00000312070
  ensembl transcript: ENST00000308177
  gene symbol: PCDHGC3
  hgvsc: ENST00000308177.3:c.2431-7130G>A
  variant of: http://identifiers.org/hgnc/8716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254221
  ensembl protein: ENSP00000429273
  ensembl transcript: ENST00000523390
  gene symbol: PCDHGB1
  hgvsc: ENST00000523390.1:c.2410-7130G>A
  variant of: http://identifiers.org/hgnc/8708
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253767
  ensembl protein: ENSP00000381605
  ensembl transcript: ENST00000398604
  gene symbol: PCDHGA8
  hgvsc: ENST00000398604.2:c.2425-7130G>A
  variant of: http://identifiers.org/hgnc/8706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253910
  ensembl protein: ENSP00000429018
  ensembl transcript: ENST00000522605
  gene symbol: PCDHGB2
  hgvsc: ENST00000522605.1:c.2422-7130G>A
  variant of: http://identifiers.org/hgnc/8709
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261934
  ensembl protein: ENSP00000460274
  ensembl transcript: ENST00000573521
  gene symbol: PCDHGA9
  hgvsc: ENST00000573521.1:c.2425-7130G>A
  variant of: http://identifiers.org/hgnc/8707
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262576
  ensembl protein: ENSP00000458570
  ensembl transcript: ENST00000571252
  gene symbol: PCDHGA4
  hgvsc: ENST00000571252.1:c.2422-7130G>A
  variant of: http://identifiers.org/hgnc/8702
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253953
  ensembl protein: ENSP00000428288
  ensembl transcript: ENST00000519479
  gene symbol: PCDHGB4
  hgvsc: ENST00000519479.1:c.2398-7130G>A
  variant of: http://identifiers.org/hgnc/8711
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000428333
  ensembl transcript: ENST00000518882
  gene symbol: PCDHGA11
  hgvsc: ENST00000518882.1:c.1879-7130G>A
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000242419
  ensembl protein: ENSP00000306918
  ensembl transcript: ENST00000306593
  gene symbol: PCDHGC4
  hgvsc: ENST00000306593.1:c.2442+62G>A
  variant of: http://identifiers.org/hgnc/8717
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262209
  ensembl protein: ENSP00000461862
  ensembl transcript: ENST00000576222
  gene symbol: PCDHGB3
  hgvsc: ENST00000576222.1:c.2416-7130G>A
  variant of: http://identifiers.org/hgnc/8710
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253537
  ensembl protein: ENSP00000430024
  ensembl transcript: ENST00000518325
  gene symbol: PCDHGA7
  hgvsc: ENST00000518325.1:c.2425-7130G>A
  variant of: http://identifiers.org/hgnc/8705
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253159
  ensembl protein: ENSP00000252085
  ensembl transcript: ENST00000252085
  gene symbol: PCDHGA12
  hgvsc: ENST00000252085.3:c.2425-7130G>A
  variant of: http://identifiers.org/hgnc/8699
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253731
  ensembl protein: ENSP00000429601
  ensembl transcript: ENST00000517434
  gene symbol: PCDHGA6
  hgvsc: ENST00000517434.1:c.2425-7130G>A
  variant of: http://identifiers.org/hgnc/8704
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
population: African
population: Latino
reference allele: G
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ

5-140867248-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140867248
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140867248
    reference: chr 5
allele count: 4
allele frequency: 5.29464711177e-5
allele num: 75548
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261934
  ensembl protein: ENSP00000460274
  ensembl transcript: ENST00000573521
  gene symbol: PCDHGA9
  hgvsc: ENST00000573521.1:c.2425-7126T>C
  variant of: http://identifiers.org/hgnc/8707
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081853
  ensembl protein: ENSP00000378077
  ensembl transcript: ENST00000394576
  gene symbol: PCDHGA2
  hgvsc: ENST00000394576.2:c.2425-7126T>C
  variant of: http://identifiers.org/hgnc/8700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254245
  ensembl protein: ENSP00000253812
  ensembl transcript: ENST00000253812
  gene symbol: PCDHGA3
  hgvsc: ENST00000253812.6:c.2425-7126T>C
  variant of: http://identifiers.org/hgnc/8701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254221
  ensembl protein: ENSP00000429273
  ensembl transcript: ENST00000523390
  gene symbol: PCDHGB1
  hgvsc: ENST00000523390.1:c.2410-7126T>C
  variant of: http://identifiers.org/hgnc/8708
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253846
  ensembl protein: ENSP00000381611
  ensembl transcript: ENST00000398610
  gene symbol: PCDHGA10
  hgvsc: ENST00000398610.2:c.2437-7126T>C
  variant of: http://identifiers.org/hgnc/8697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262576
  ensembl protein: ENSP00000458570
  ensembl transcript: ENST00000571252
  gene symbol: PCDHGA4
  hgvsc: ENST00000571252.1:c.2422-7126T>C
  variant of: http://identifiers.org/hgnc/8702
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000240184
  ensembl protein: ENSP00000312070
  ensembl transcript: ENST00000308177
  gene symbol: PCDHGC3
  hgvsc: ENST00000308177.3:c.2431-7126T>C
  variant of: http://identifiers.org/hgnc/8716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000242419
  ensembl protein: ENSP00000306918
  ensembl transcript: ENST00000306593
  gene symbol: PCDHGC4
  hgvsc: ENST00000306593.1:c.2442+66T>C
  variant of: http://identifiers.org/hgnc/8717
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262209
  ensembl protein: ENSP00000461862
  ensembl transcript: ENST00000576222
  gene symbol: PCDHGB3
  hgvsc: ENST00000576222.1:c.2416-7126T>C
  variant of: http://identifiers.org/hgnc/8710
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253485
  ensembl protein: ENSP00000429834
  ensembl transcript: ENST00000518069
  gene symbol: PCDHGA5
  hgvsc: ENST00000518069.1:c.2422-7126T>C
  variant of: http://identifiers.org/hgnc/8703
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253767
  ensembl protein: ENSP00000381605
  ensembl transcript: ENST00000398604
  gene symbol: PCDHGA8
  hgvsc: ENST00000398604.2:c.2425-7126T>C
  variant of: http://identifiers.org/hgnc/8706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253159
  ensembl protein: ENSP00000252085
  ensembl transcript: ENST00000252085
  gene symbol: PCDHGA12
  hgvsc: ENST00000252085.3:c.2425-7126T>C
  variant of: http://identifiers.org/hgnc/8699
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253953
  ensembl protein: ENSP00000428288
  ensembl transcript: ENST00000519479
  gene symbol: PCDHGB4
  hgvsc: ENST00000519479.1:c.2398-7126T>C
  variant of: http://identifiers.org/hgnc/8711
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204956
  ensembl protein: ENSP00000431083
  ensembl transcript: ENST00000517417
  gene symbol: PCDHGA1
  hgvsc: ENST00000517417.1:c.2422-7126T>C
  variant of: http://identifiers.org/hgnc/8696
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253537
  ensembl protein: ENSP00000430024
  ensembl transcript: ENST00000518325
  gene symbol: PCDHGA7
  hgvsc: ENST00000518325.1:c.2425-7126T>C
  variant of: http://identifiers.org/hgnc/8705
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253910
  ensembl protein: ENSP00000429018
  ensembl transcript: ENST00000522605
  gene symbol: PCDHGB2
  hgvsc: ENST00000522605.1:c.2422-7126T>C
  variant of: http://identifiers.org/hgnc/8709
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000428333
  ensembl transcript: ENST00000518882
  gene symbol: PCDHGA11
  hgvsc: ENST00000518882.1:c.1879-7126T>C
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254122
  ensembl protein: ENSP00000381594
  ensembl transcript: ENST00000398594
  gene symbol: PCDHGB7
  hgvsc: ENST00000398594.2:c.2416-7126T>C
  variant of: http://identifiers.org/hgnc/8714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253731
  ensembl protein: ENSP00000429601
  ensembl transcript: ENST00000517434
  gene symbol: PCDHGA6
  hgvsc: ENST00000517434.1:c.2425-7126T>C
  variant of: http://identifiers.org/hgnc/8704
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000381589
  ensembl transcript: ENST00000398587
  gene symbol: PCDHGA11
  hgvsc: ENST00000398587.2:c.2434-7126T>C
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253305
  ensembl protein: ENSP00000428603
  ensembl transcript: ENST00000520790
  gene symbol: PCDHGB6
  hgvsc: ENST00000520790.1:c.2419-7126T>C
  variant of: http://identifiers.org/hgnc/8713
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum

5-140867249-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140867249
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140867249
    reference: chr 5
allele count: 1
allele frequency: 1.379576745854372e-5
allele num: 72486
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081853
  ensembl protein: ENSP00000378077
  ensembl transcript: ENST00000394576
  gene symbol: PCDHGA2
  hgvsc: ENST00000394576.2:c.2425-7125G>A
  variant of: http://identifiers.org/hgnc/8700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253846
  ensembl protein: ENSP00000381611
  ensembl transcript: ENST00000398610
  gene symbol: PCDHGA10
  hgvsc: ENST00000398610.2:c.2437-7125G>A
  variant of: http://identifiers.org/hgnc/8697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262209
  ensembl protein: ENSP00000461862
  ensembl transcript: ENST00000576222
  gene symbol: PCDHGB3
  hgvsc: ENST00000576222.1:c.2416-7125G>A
  variant of: http://identifiers.org/hgnc/8710
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262576
  ensembl protein: ENSP00000458570
  ensembl transcript: ENST00000571252
  gene symbol: PCDHGA4
  hgvsc: ENST00000571252.1:c.2422-7125G>A
  variant of: http://identifiers.org/hgnc/8702
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204956
  ensembl protein: ENSP00000431083
  ensembl transcript: ENST00000517417
  gene symbol: PCDHGA1
  hgvsc: ENST00000517417.1:c.2422-7125G>A
  variant of: http://identifiers.org/hgnc/8696
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254122
  ensembl protein: ENSP00000381594
  ensembl transcript: ENST00000398594
  gene symbol: PCDHGB7
  hgvsc: ENST00000398594.2:c.2416-7125G>A
  variant of: http://identifiers.org/hgnc/8714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254245
  ensembl protein: ENSP00000253812
  ensembl transcript: ENST00000253812
  gene symbol: PCDHGA3
  hgvsc: ENST00000253812.6:c.2425-7125G>A
  variant of: http://identifiers.org/hgnc/8701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253537
  ensembl protein: ENSP00000430024
  ensembl transcript: ENST00000518325
  gene symbol: PCDHGA7
  hgvsc: ENST00000518325.1:c.2425-7125G>A
  variant of: http://identifiers.org/hgnc/8705
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253485
  ensembl protein: ENSP00000429834
  ensembl transcript: ENST00000518069
  gene symbol: PCDHGA5
  hgvsc: ENST00000518069.1:c.2422-7125G>A
  variant of: http://identifiers.org/hgnc/8703
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253159
  ensembl protein: ENSP00000252085
  ensembl transcript: ENST00000252085
  gene symbol: PCDHGA12
  hgvsc: ENST00000252085.3:c.2425-7125G>A
  variant of: http://identifiers.org/hgnc/8699
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254221
  ensembl protein: ENSP00000429273
  ensembl transcript: ENST00000523390
  gene symbol: PCDHGB1
  hgvsc: ENST00000523390.1:c.2410-7125G>A
  variant of: http://identifiers.org/hgnc/8708
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000381589
  ensembl transcript: ENST00000398587
  gene symbol: PCDHGA11
  hgvsc: ENST00000398587.2:c.2434-7125G>A
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000242419
  ensembl protein: ENSP00000306918
  ensembl transcript: ENST00000306593
  gene symbol: PCDHGC4
  hgvsc: ENST00000306593.1:c.2442+67G>A
  variant of: http://identifiers.org/hgnc/8717
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000428333
  ensembl transcript: ENST00000518882
  gene symbol: PCDHGA11
  hgvsc: ENST00000518882.1:c.1879-7125G>A
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253910
  ensembl protein: ENSP00000429018
  ensembl transcript: ENST00000522605
  gene symbol: PCDHGB2
  hgvsc: ENST00000522605.1:c.2422-7125G>A
  variant of: http://identifiers.org/hgnc/8709
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000240184
  ensembl protein: ENSP00000312070
  ensembl transcript: ENST00000308177
  gene symbol: PCDHGC3
  hgvsc: ENST00000308177.3:c.2431-7125G>A
  variant of: http://identifiers.org/hgnc/8716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253767
  ensembl protein: ENSP00000381605
  ensembl transcript: ENST00000398604
  gene symbol: PCDHGA8
  hgvsc: ENST00000398604.2:c.2425-7125G>A
  variant of: http://identifiers.org/hgnc/8706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253305
  ensembl protein: ENSP00000428603
  ensembl transcript: ENST00000520790
  gene symbol: PCDHGB6
  hgvsc: ENST00000520790.1:c.2419-7125G>A
  variant of: http://identifiers.org/hgnc/8713
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261934
  ensembl protein: ENSP00000460274
  ensembl transcript: ENST00000573521
  gene symbol: PCDHGA9
  hgvsc: ENST00000573521.1:c.2425-7125G>A
  variant of: http://identifiers.org/hgnc/8707
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253953
  ensembl protein: ENSP00000428288
  ensembl transcript: ENST00000519479
  gene symbol: PCDHGB4
  hgvsc: ENST00000519479.1:c.2398-7125G>A
  variant of: http://identifiers.org/hgnc/8711
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253731
  ensembl protein: ENSP00000429601
  ensembl transcript: ENST00000517434
  gene symbol: PCDHGA6
  hgvsc: ENST00000517434.1:c.2425-7125G>A
  variant of: http://identifiers.org/hgnc/8704
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: BaseQRankSum

5-140867253-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140867253
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140867253
    reference: chr 5
allele count: 1
allele frequency: 1.43587387283901e-5
allele num: 69644
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253910
  ensembl protein: ENSP00000429018
  ensembl transcript: ENST00000522605
  gene symbol: PCDHGB2
  hgvsc: ENST00000522605.1:c.2422-7121T>G
  variant of: http://identifiers.org/hgnc/8709
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081853
  ensembl protein: ENSP00000378077
  ensembl transcript: ENST00000394576
  gene symbol: PCDHGA2
  hgvsc: ENST00000394576.2:c.2425-7121T>G
  variant of: http://identifiers.org/hgnc/8700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261934
  ensembl protein: ENSP00000460274
  ensembl transcript: ENST00000573521
  gene symbol: PCDHGA9
  hgvsc: ENST00000573521.1:c.2425-7121T>G
  variant of: http://identifiers.org/hgnc/8707
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000381589
  ensembl transcript: ENST00000398587
  gene symbol: PCDHGA11
  hgvsc: ENST00000398587.2:c.2434-7121T>G
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204956
  ensembl protein: ENSP00000431083
  ensembl transcript: ENST00000517417
  gene symbol: PCDHGA1
  hgvsc: ENST00000517417.1:c.2422-7121T>G
  variant of: http://identifiers.org/hgnc/8696
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262576
  ensembl protein: ENSP00000458570
  ensembl transcript: ENST00000571252
  gene symbol: PCDHGA4
  hgvsc: ENST00000571252.1:c.2422-7121T>G
  variant of: http://identifiers.org/hgnc/8702
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000240184
  ensembl protein: ENSP00000312070
  ensembl transcript: ENST00000308177
  gene symbol: PCDHGC3
  hgvsc: ENST00000308177.3:c.2431-7121T>G
  variant of: http://identifiers.org/hgnc/8716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253537
  ensembl protein: ENSP00000430024
  ensembl transcript: ENST00000518325
  gene symbol: PCDHGA7
  hgvsc: ENST00000518325.1:c.2425-7121T>G
  variant of: http://identifiers.org/hgnc/8705
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254221
  ensembl protein: ENSP00000429273
  ensembl transcript: ENST00000523390
  gene symbol: PCDHGB1
  hgvsc: ENST00000523390.1:c.2410-7121T>G
  variant of: http://identifiers.org/hgnc/8708
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254245
  ensembl protein: ENSP00000253812
  ensembl transcript: ENST00000253812
  gene symbol: PCDHGA3
  hgvsc: ENST00000253812.6:c.2425-7121T>G
  variant of: http://identifiers.org/hgnc/8701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253846
  ensembl protein: ENSP00000381611
  ensembl transcript: ENST00000398610
  gene symbol: PCDHGA10
  hgvsc: ENST00000398610.2:c.2437-7121T>G
  variant of: http://identifiers.org/hgnc/8697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253767
  ensembl protein: ENSP00000381605
  ensembl transcript: ENST00000398604
  gene symbol: PCDHGA8
  hgvsc: ENST00000398604.2:c.2425-7121T>G
  variant of: http://identifiers.org/hgnc/8706
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000428333
  ensembl transcript: ENST00000518882
  gene symbol: PCDHGA11
  hgvsc: ENST00000518882.1:c.1879-7121T>G
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262209
  ensembl protein: ENSP00000461862
  ensembl transcript: ENST00000576222
  gene symbol: PCDHGB3
  hgvsc: ENST00000576222.1:c.2416-7121T>G
  variant of: http://identifiers.org/hgnc/8710
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253485
  ensembl protein: ENSP00000429834
  ensembl transcript: ENST00000518069
  gene symbol: PCDHGA5
  hgvsc: ENST00000518069.1:c.2422-7121T>G
  variant of: http://identifiers.org/hgnc/8703
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253159
  ensembl protein: ENSP00000252085
  ensembl transcript: ENST00000252085
  gene symbol: PCDHGA12
  hgvsc: ENST00000252085.3:c.2425-7121T>G
  variant of: http://identifiers.org/hgnc/8699
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253731
  ensembl protein: ENSP00000429601
  ensembl transcript: ENST00000517434
  gene symbol: PCDHGA6
  hgvsc: ENST00000517434.1:c.2425-7121T>G
  variant of: http://identifiers.org/hgnc/8704
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253305
  ensembl protein: ENSP00000428603
  ensembl transcript: ENST00000520790
  gene symbol: PCDHGB6
  hgvsc: ENST00000520790.1:c.2419-7121T>G
  variant of: http://identifiers.org/hgnc/8713
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254122
  ensembl protein: ENSP00000381594
  ensembl transcript: ENST00000398594
  gene symbol: PCDHGB7
  hgvsc: ENST00000398594.2:c.2416-7121T>G
  variant of: http://identifiers.org/hgnc/8714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253953
  ensembl protein: ENSP00000428288
  ensembl transcript: ENST00000519479
  gene symbol: PCDHGB4
  hgvsc: ENST00000519479.1:c.2398-7121T>G
  variant of: http://identifiers.org/hgnc/8711
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000242419
  ensembl protein: ENSP00000306918
  ensembl transcript: ENST00000306593
  gene symbol: PCDHGC4
  hgvsc: ENST00000306593.1:c.2442+71T>G
  variant of: http://identifiers.org/hgnc/8717
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: Other
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: MQ

5-140867254-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140867254
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140867254
    reference: chr 5
allele count: 1
allele frequency: 1.435008466549953e-5
allele num: 69686
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254221
  ensembl protein: ENSP00000429273
  ensembl transcript: ENST00000523390
  gene symbol: PCDHGB1
  hgvsc: ENST00000523390.1:c.2410-7120A>G
  variant of: http://identifiers.org/hgnc/8708
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081853
  ensembl protein: ENSP00000378077
  ensembl transcript: ENST00000394576
  gene symbol: PCDHGA2
  hgvsc: ENST00000394576.2:c.2425-7120A>G
  variant of: http://identifiers.org/hgnc/8700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204956
  ensembl protein: ENSP00000431083
  ensembl transcript: ENST00000517417
  gene symbol: PCDHGA1
  hgvsc: ENST00000517417.1:c.2422-7120A>G
  variant of: http://identifiers.org/hgnc/8696
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000240184
  ensembl protein: ENSP00000312070
  ensembl transcript: ENST00000308177
  gene symbol: PCDHGC3
  hgvsc: ENST00000308177.3:c.2431-7120A>G
  variant of: http://identifiers.org/hgnc/8716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253846
  ensembl protein: ENSP00000381611
  ensembl transcript: ENST00000398610
  gene symbol: PCDHGA10
  hgvsc: ENST00000398610.2:c.2437-7120A>G
  variant of: http://identifiers.org/hgnc/8697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262209
  ensembl protein: ENSP00000461862
  ensembl transcript: ENST00000576222
  gene symbol: PCDHGB3
  hgvsc: ENST00000576222.1:c.2416-7120A>G
  variant of: http://identifiers.org/hgnc/8710
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254245
  ensembl protein: ENSP00000253812
  ensembl transcript: ENST00000253812
  gene symbol: PCDHGA3
  hgvsc: ENST00000253812.6:c.2425-7120A>G
  variant of: http://identifiers.org/hgnc/8701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262576
  ensembl protein: ENSP00000458570
  ensembl transcript: ENST00000571252
  gene symbol: PCDHGA4
  hgvsc: ENST00000571252.1:c.2422-7120A>G
  variant of: http://identifiers.org/hgnc/8702
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000381589
  ensembl transcript: ENST00000398587
  gene symbol: PCDHGA11
  hgvsc: ENST00000398587.2:c.2434-7120A>G
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253910
  ensembl protein: ENSP00000429018
  ensembl transcript: ENST00000522605
  gene symbol: PCDHGB2
  hgvsc: ENST00000522605.1:c.2422-7120A>G
  variant of: http://identifiers.org/hgnc/8709
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253731
  ensembl protein: ENSP00000429601
  ensembl transcript: ENST00000517434
  gene symbol: PCDHGA6
  hgvsc: ENST00000517434.1:c.2425-7120A>G
  variant of: http://identifiers.org/hgnc/8704
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000242419
  ensembl protein: ENSP00000306918
  ensembl transcript: ENST00000306593
  gene symbol: PCDHGC4
  hgvsc: ENST00000306593.1:c.2442+72A>G
  variant of: http://identifiers.org/hgnc/8717
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253485
  ensembl protein: ENSP00000429834
  ensembl transcript: ENST00000518069
  gene symbol: PCDHGA5
  hgvsc: ENST00000518069.1:c.2422-7120A>G
  variant of: http://identifiers.org/hgnc/8703
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253305
  ensembl protein: ENSP00000428603
  ensembl transcript: ENST00000520790
  gene symbol: PCDHGB6
  hgvsc: ENST00000520790.1:c.2419-7120A>G
  variant of: http://identifiers.org/hgnc/8713
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253953
  ensembl protein: ENSP00000428288
  ensembl transcript: ENST00000519479
  gene symbol: PCDHGB4
  hgvsc: ENST00000519479.1:c.2398-7120A>G
  variant of: http://identifiers.org/hgnc/8711
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253767
  ensembl protein: ENSP00000381605
  ensembl transcript: ENST00000398604
  gene symbol: PCDHGA8
  hgvsc: ENST00000398604.2:c.2425-7120A>G
  variant of: http://identifiers.org/hgnc/8706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253537
  ensembl protein: ENSP00000430024
  ensembl transcript: ENST00000518325
  gene symbol: PCDHGA7
  hgvsc: ENST00000518325.1:c.2425-7120A>G
  variant of: http://identifiers.org/hgnc/8705
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253159
  ensembl protein: ENSP00000252085
  ensembl transcript: ENST00000252085
  gene symbol: PCDHGA12
  hgvsc: ENST00000252085.3:c.2425-7120A>G
  variant of: http://identifiers.org/hgnc/8699
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254122
  ensembl protein: ENSP00000381594
  ensembl transcript: ENST00000398594
  gene symbol: PCDHGB7
  hgvsc: ENST00000398594.2:c.2416-7120A>G
  variant of: http://identifiers.org/hgnc/8714
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000428333
  ensembl transcript: ENST00000518882
  gene symbol: PCDHGA11
  hgvsc: ENST00000518882.1:c.1879-7120A>G
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261934
  ensembl protein: ENSP00000460274
  ensembl transcript: ENST00000573521
  gene symbol: PCDHGA9
  hgvsc: ENST00000573521.1:c.2425-7120A>G
  variant of: http://identifiers.org/hgnc/8707
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
population: African
population: Latino
reference allele: A
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: DP
site quality: MQ
site quality: BaseQRankSum

5-140867255-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140867255
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140867255
    reference: chr 5
allele count: 1
allele frequency: 1.48064793153484e-5
allele num: 67538
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254245
  ensembl protein: ENSP00000253812
  ensembl transcript: ENST00000253812
  gene symbol: PCDHGA3
  hgvsc: ENST00000253812.6:c.2425-7119G>T
  variant of: http://identifiers.org/hgnc/8701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262209
  ensembl protein: ENSP00000461862
  ensembl transcript: ENST00000576222
  gene symbol: PCDHGB3
  hgvsc: ENST00000576222.1:c.2416-7119G>T
  variant of: http://identifiers.org/hgnc/8710
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261934
  ensembl protein: ENSP00000460274
  ensembl transcript: ENST00000573521
  gene symbol: PCDHGA9
  hgvsc: ENST00000573521.1:c.2425-7119G>T
  variant of: http://identifiers.org/hgnc/8707
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262576
  ensembl protein: ENSP00000458570
  ensembl transcript: ENST00000571252
  gene symbol: PCDHGA4
  hgvsc: ENST00000571252.1:c.2422-7119G>T
  variant of: http://identifiers.org/hgnc/8702
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253910
  ensembl protein: ENSP00000429018
  ensembl transcript: ENST00000522605
  gene symbol: PCDHGB2
  hgvsc: ENST00000522605.1:c.2422-7119G>T
  variant of: http://identifiers.org/hgnc/8709
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000428333
  ensembl transcript: ENST00000518882
  gene symbol: PCDHGA11
  hgvsc: ENST00000518882.1:c.1879-7119G>T
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253537
  ensembl protein: ENSP00000430024
  ensembl transcript: ENST00000518325
  gene symbol: PCDHGA7
  hgvsc: ENST00000518325.1:c.2425-7119G>T
  variant of: http://identifiers.org/hgnc/8705
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253846
  ensembl protein: ENSP00000381611
  ensembl transcript: ENST00000398610
  gene symbol: PCDHGA10
  hgvsc: ENST00000398610.2:c.2437-7119G>T
  variant of: http://identifiers.org/hgnc/8697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081853
  ensembl protein: ENSP00000378077
  ensembl transcript: ENST00000394576
  gene symbol: PCDHGA2
  hgvsc: ENST00000394576.2:c.2425-7119G>T
  variant of: http://identifiers.org/hgnc/8700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253305
  ensembl protein: ENSP00000428603
  ensembl transcript: ENST00000520790
  gene symbol: PCDHGB6
  hgvsc: ENST00000520790.1:c.2419-7119G>T
  variant of: http://identifiers.org/hgnc/8713
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253767
  ensembl protein: ENSP00000381605
  ensembl transcript: ENST00000398604
  gene symbol: PCDHGA8
  hgvsc: ENST00000398604.2:c.2425-7119G>T
  variant of: http://identifiers.org/hgnc/8706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253485
  ensembl protein: ENSP00000429834
  ensembl transcript: ENST00000518069
  gene symbol: PCDHGA5
  hgvsc: ENST00000518069.1:c.2422-7119G>T
  variant of: http://identifiers.org/hgnc/8703
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204956
  ensembl protein: ENSP00000431083
  ensembl transcript: ENST00000517417
  gene symbol: PCDHGA1
  hgvsc: ENST00000517417.1:c.2422-7119G>T
  variant of: http://identifiers.org/hgnc/8696
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253731
  ensembl protein: ENSP00000429601
  ensembl transcript: ENST00000517434
  gene symbol: PCDHGA6
  hgvsc: ENST00000517434.1:c.2425-7119G>T
  variant of: http://identifiers.org/hgnc/8704
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000381589
  ensembl transcript: ENST00000398587
  gene symbol: PCDHGA11
  hgvsc: ENST00000398587.2:c.2434-7119G>T
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253159
  ensembl protein: ENSP00000252085
  ensembl transcript: ENST00000252085
  gene symbol: PCDHGA12
  hgvsc: ENST00000252085.3:c.2425-7119G>T
  variant of: http://identifiers.org/hgnc/8699
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254221
  ensembl protein: ENSP00000429273
  ensembl transcript: ENST00000523390
  gene symbol: PCDHGB1
  hgvsc: ENST00000523390.1:c.2410-7119G>T
  variant of: http://identifiers.org/hgnc/8708
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253953
  ensembl protein: ENSP00000428288
  ensembl transcript: ENST00000519479
  gene symbol: PCDHGB4
  hgvsc: ENST00000519479.1:c.2398-7119G>T
  variant of: http://identifiers.org/hgnc/8711
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000242419
  ensembl protein: ENSP00000306918
  ensembl transcript: ENST00000306593
  gene symbol: PCDHGC4
  hgvsc: ENST00000306593.1:c.2442+73G>T
  variant of: http://identifiers.org/hgnc/8717
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254122
  ensembl protein: ENSP00000381594
  ensembl transcript: ENST00000398594
  gene symbol: PCDHGB7
  hgvsc: ENST00000398594.2:c.2416-7119G>T
  variant of: http://identifiers.org/hgnc/8714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000240184
  ensembl protein: ENSP00000312070
  ensembl transcript: ENST00000308177
  gene symbol: PCDHGC3
  hgvsc: ENST00000308177.3:c.2431-7119G>T
  variant of: http://identifiers.org/hgnc/8716
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: Other
population: African
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD

5-140867272-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140867272
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140867272
    reference: chr 5
allele count: 0
allele frequency: 0.0e0
allele num: 53520
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261934
  ensembl protein: ENSP00000460274
  ensembl transcript: ENST00000573521
  gene symbol: PCDHGA9
  hgvsc: ENST00000573521.1:c.2425-7102A>G
  variant of: http://identifiers.org/hgnc/8707
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262209
  ensembl protein: ENSP00000461862
  ensembl transcript: ENST00000576222
  gene symbol: PCDHGB3
  hgvsc: ENST00000576222.1:c.2416-7102A>G
  variant of: http://identifiers.org/hgnc/8710
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254122
  ensembl protein: ENSP00000381594
  ensembl transcript: ENST00000398594
  gene symbol: PCDHGB7
  hgvsc: ENST00000398594.2:c.2416-7102A>G
  variant of: http://identifiers.org/hgnc/8714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081853
  ensembl protein: ENSP00000378077
  ensembl transcript: ENST00000394576
  gene symbol: PCDHGA2
  hgvsc: ENST00000394576.2:c.2425-7102A>G
  variant of: http://identifiers.org/hgnc/8700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253846
  ensembl protein: ENSP00000381611
  ensembl transcript: ENST00000398610
  gene symbol: PCDHGA10
  hgvsc: ENST00000398610.2:c.2437-7102A>G
  variant of: http://identifiers.org/hgnc/8697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000240184
  ensembl protein: ENSP00000312070
  ensembl transcript: ENST00000308177
  gene symbol: PCDHGC3
  hgvsc: ENST00000308177.3:c.2431-7102A>G
  variant of: http://identifiers.org/hgnc/8716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253159
  ensembl protein: ENSP00000252085
  ensembl transcript: ENST00000252085
  gene symbol: PCDHGA12
  hgvsc: ENST00000252085.3:c.2425-7102A>G
  variant of: http://identifiers.org/hgnc/8699
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262576
  ensembl protein: ENSP00000458570
  ensembl transcript: ENST00000571252
  gene symbol: PCDHGA4
  hgvsc: ENST00000571252.1:c.2422-7102A>G
  variant of: http://identifiers.org/hgnc/8702
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000242419
  ensembl protein: ENSP00000306918
  ensembl transcript: ENST00000306593
  gene symbol: PCDHGC4
  hgvsc: ENST00000306593.1:c.2442+90A>G
  variant of: http://identifiers.org/hgnc/8717
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253731
  ensembl protein: ENSP00000429601
  ensembl transcript: ENST00000517434
  gene symbol: PCDHGA6
  hgvsc: ENST00000517434.1:c.2425-7102A>G
  variant of: http://identifiers.org/hgnc/8704
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253910
  ensembl protein: ENSP00000429018
  ensembl transcript: ENST00000522605
  gene symbol: PCDHGB2
  hgvsc: ENST00000522605.1:c.2422-7102A>G
  variant of: http://identifiers.org/hgnc/8709
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204956
  ensembl protein: ENSP00000431083
  ensembl transcript: ENST00000517417
  gene symbol: PCDHGA1
  hgvsc: ENST00000517417.1:c.2422-7102A>G
  variant of: http://identifiers.org/hgnc/8696
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254221
  ensembl protein: ENSP00000429273
  ensembl transcript: ENST00000523390
  gene symbol: PCDHGB1
  hgvsc: ENST00000523390.1:c.2410-7102A>G
  variant of: http://identifiers.org/hgnc/8708
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254245
  ensembl protein: ENSP00000253812
  ensembl transcript: ENST00000253812
  gene symbol: PCDHGA3
  hgvsc: ENST00000253812.6:c.2425-7102A>G
  variant of: http://identifiers.org/hgnc/8701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000381589
  ensembl transcript: ENST00000398587
  gene symbol: PCDHGA11
  hgvsc: ENST00000398587.2:c.2434-7102A>G
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253485
  ensembl protein: ENSP00000429834
  ensembl transcript: ENST00000518069
  gene symbol: PCDHGA5
  hgvsc: ENST00000518069.1:c.2422-7102A>G
  variant of: http://identifiers.org/hgnc/8703
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253537
  ensembl protein: ENSP00000430024
  ensembl transcript: ENST00000518325
  gene symbol: PCDHGA7
  hgvsc: ENST00000518325.1:c.2425-7102A>G
  variant of: http://identifiers.org/hgnc/8705
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253305
  ensembl protein: ENSP00000428603
  ensembl transcript: ENST00000520790
  gene symbol: PCDHGB6
  hgvsc: ENST00000520790.1:c.2419-7102A>G
  variant of: http://identifiers.org/hgnc/8713
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000428333
  ensembl transcript: ENST00000518882
  gene symbol: PCDHGA11
  hgvsc: ENST00000518882.1:c.1879-7102A>G
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253953
  ensembl protein: ENSP00000428288
  ensembl transcript: ENST00000519479
  gene symbol: PCDHGB4
  hgvsc: ENST00000519479.1:c.2398-7102A>G
  variant of: http://identifiers.org/hgnc/8711
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253767
  ensembl protein: ENSP00000381605
  ensembl transcript: ENST00000398604
  gene symbol: PCDHGA8
  hgvsc: ENST00000398604.2:c.2425-7102A>G
  variant of: http://identifiers.org/hgnc/8706
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: A
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: MQ

5-140867277-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140867277
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140867277
    reference: chr 5
allele count: 28
allele frequency: 6.082989354768629e-4
allele num: 46030
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000381589
  ensembl transcript: ENST00000398587
  gene symbol: PCDHGA11
  hgvsc: ENST00000398587.2:c.2434-7097G>A
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253537
  ensembl protein: ENSP00000430024
  ensembl transcript: ENST00000518325
  gene symbol: PCDHGA7
  hgvsc: ENST00000518325.1:c.2425-7097G>A
  variant of: http://identifiers.org/hgnc/8705
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254245
  ensembl protein: ENSP00000253812
  ensembl transcript: ENST00000253812
  gene symbol: PCDHGA3
  hgvsc: ENST00000253812.6:c.2425-7097G>A
  variant of: http://identifiers.org/hgnc/8701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204956
  ensembl protein: ENSP00000431083
  ensembl transcript: ENST00000517417
  gene symbol: PCDHGA1
  hgvsc: ENST00000517417.1:c.2422-7097G>A
  variant of: http://identifiers.org/hgnc/8696
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254122
  ensembl protein: ENSP00000381594
  ensembl transcript: ENST00000398594
  gene symbol: PCDHGB7
  hgvsc: ENST00000398594.2:c.2416-7097G>A
  variant of: http://identifiers.org/hgnc/8714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253731
  ensembl protein: ENSP00000429601
  ensembl transcript: ENST00000517434
  gene symbol: PCDHGA6
  hgvsc: ENST00000517434.1:c.2425-7097G>A
  variant of: http://identifiers.org/hgnc/8704
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253846
  ensembl protein: ENSP00000381611
  ensembl transcript: ENST00000398610
  gene symbol: PCDHGA10
  hgvsc: ENST00000398610.2:c.2437-7097G>A
  variant of: http://identifiers.org/hgnc/8697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000240184
  ensembl protein: ENSP00000312070
  ensembl transcript: ENST00000308177
  gene symbol: PCDHGC3
  hgvsc: ENST00000308177.3:c.2431-7097G>A
  variant of: http://identifiers.org/hgnc/8716
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253910
  ensembl protein: ENSP00000429018
  ensembl transcript: ENST00000522605
  gene symbol: PCDHGB2
  hgvsc: ENST00000522605.1:c.2422-7097G>A
  variant of: http://identifiers.org/hgnc/8709
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000428333
  ensembl transcript: ENST00000518882
  gene symbol: PCDHGA11
  hgvsc: ENST00000518882.1:c.1879-7097G>A
  variant of: http://identifiers.org/hgnc/8698
canonical: true
consequence: intron
filter: PASS
num of homozygotes: 0
reference allele: G

GenotypeQuality
all individuals: 7
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2045
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6232
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 673
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31191
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 988
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16350
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1251
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498800959232614e-5
allele num: 66720
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.71e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

QD
type: SiteQuality
SIO_000300: 1.234e1

MQRankSum
type: SiteQuality
SIO_000300: 1.67e-1

DP
type: SiteQuality
SIO_000300: 2.163089e6

MQ
type: SiteQuality
SIO_000300: 5.968e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.242e0

VQSLOD
type: SiteQuality
SIO_000300: 2.14e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.77e-1

FS
type: SiteQuality
SIO_000300: 1.656e0

GenotypeQuality
all individuals: 5
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2042
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 673
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 16354
bin: 9.75e1
variant carriers: 22

GenotypeQuality
all individuals: 5
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1905
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6233
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.611687812379854e-5
allele num: 10404
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.31107002542177e-4
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 15
allele frequency: 1.295560545862843e-3
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 5.995203836930456e-5
allele num: 66720
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.44e-1

QD
type: SiteQuality
SIO_000300: 1.267e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 3.39e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.86e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.135e0

VQSLOD
type: SiteQuality
SIO_000300: 5.78e0

DP
type: SiteQuality
SIO_000300: 2.164268e6

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.962e1

GenotypeQuality
all individuals: 16338
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 6236
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 31215
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 988
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1905
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 673
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1252
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498711108446736e-5
allele num: 66724
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.162942e6

FS
type: SiteQuality
SIO_000300: 1.874e0

VQSLOD
type: SiteQuality
SIO_000300: -3.734e0

MQ
type: SiteQuality
SIO_000300: 5.91e1

QD
type: SiteQuality
SIO_000300: 2.474e1

MQRankSum
type: SiteQuality
SIO_000300: 1.31e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.696e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.3e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.48e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 31211
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 673
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 988
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6238
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2044
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1906
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16339
bin: 9.75e1
variant carriers: 4

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66724
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 3.844675124951942e-4
allele num: 10404
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.28e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.149e0

MQ
type: SiteQuality
SIO_000300: 5.967e1

QD
type: SiteQuality
SIO_000300: 1.304e1

DP
type: SiteQuality
SIO_000300: 2.163188e6

ClippingRankSum
type: SiteQuality
SIO_000300: 5.15e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.15e0

MQRankSum
type: SiteQuality
SIO_000300: 6.2e-1

FS
type: SiteQuality
SIO_000300: 2.472e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

GenotypeQuality
all individuals: 217
bin: 9.25e1
variant carriers: 9

GenotypeQuality
all individuals: 6
bin: 5.25e1
variant carriers: 2

GenotypeQuality
all individuals: 5426
bin: 6.75e1
variant carriers: 5

GenotypeQuality
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bin: 6.25e1
variant carriers: 3

GenotypeQuality
all individuals: 10
bin: 2.5e0
variant carriers: 2

GenotypeQuality
all individuals: 1461
bin: 7.25e1
variant carriers: 8

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1317
bin: 7.75e1
variant carriers: 7

GenotypeQuality
all individuals: 10
bin: 3.25e1
variant carriers: 2

GenotypeQuality
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bin: 9.75e1
variant carriers: 21161

GenotypeQuality
all individuals: 15
bin: 4.75e1
variant carriers: 7

GenotypeQuality
all individuals: 9
bin: 5.75e1
variant carriers: 2

South Asian
type: Population
allele count: 2154
allele frequency: 1.304663840096911e-1
allele num: 16510
num of homozygotes: 183

Latino
type: Population
allele count: 2220
allele frequency: 1.919087136929461e-1
allele num: 11568
num of homozygotes: 226

European (Finnish)
type: Population
allele count: 1836
allele frequency: 2.776769509981851e-1
allele num: 6612
num of homozygotes: 279

Other
type: Population
allele count: 171
allele frequency: 1.887417218543046e-1
allele num: 906
num of homozygotes: 17

African
type: Population
allele count: 1220
allele frequency: 1.172625913110342e-1
allele num: 10404
num of homozygotes: 76

East Asian
type: Population
allele count: 78
allele frequency: 9.013173099144903e-3
allele num: 8654
num of homozygotes: 1

European (Non-Finnish)
type: Population
allele count: 16342
allele frequency: 2.449340527577938e-1
allele num: 66720
num of homozygotes: 2013

MQ
type: SiteQuality
SIO_000300: 5.959e1

MQRankSum
type: SiteQuality
SIO_000300: 1.19e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.28e0

FS
type: SiteQuality
SIO_000300: 5.2e-1

QD
type: SiteQuality
SIO_000300: 1.562e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.1e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.35e-1

DP
type: SiteQuality
SIO_000300: 3.272199e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.84e-2

VQSLOD
type: SiteQuality
SIO_000300: 4.75e0

GenotypeQuality
all individuals: 11
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 0
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variant carriers: 0

GenotypeQuality
all individuals: 411
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variant carriers: 0

GenotypeQuality
all individuals: 324
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variant carriers: 0

GenotypeQuality
all individuals: 2248
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8580
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2296
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 5.994125756758376e-5
allele num: 66732
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -5.775e0

VQSLOD
type: SiteQuality
SIO_000300: -2.68e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.3e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 1.707851e6

MQ
type: SiteQuality
SIO_000300: 5.38e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.18e-1

FS
type: SiteQuality
SIO_000300: 2.553e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.47e0

QD
type: SiteQuality
SIO_000300: 2.72e0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43411
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
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variant carriers: 0

GenotypeQuality
all individuals: 2243
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
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variant carriers: 0

GenotypeQuality
all individuals: 8577
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variant carriers: 0

GenotypeQuality
all individuals: 2367
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 6
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
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variant carriers: 0

GenotypeQuality
all individuals: 411
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 325
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498486528606108e-5
allele num: 66734
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.344e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.919999999999999e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.34e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.63e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 5.41e-1

MQ
type: SiteQuality
SIO_000300: 5.972e1

MQRankSum
type: SiteQuality
SIO_000300: 1.04e0

DP
type: SiteQuality
SIO_000300: 1.707759e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.94e-1

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 411
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8
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variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43413
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2365
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 8579
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2292
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 5.993946114424431e-5
allele num: 66734
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.24e0

FS
type: SiteQuality
SIO_000300: 1.107e0

QD
type: SiteQuality
SIO_000300: 1.349e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.509e0

MQRankSum
type: SiteQuality
SIO_000300: -3.78e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.56e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 1.707964e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.078e0

MQ
type: SiteQuality
SIO_000300: 5.966e1

GenotypeQuality
all individuals: 3
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2295
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variant carriers: 0

GenotypeQuality
all individuals: 6
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variant carriers: 0

GenotypeQuality
all individuals: 0
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variant carriers: 0

GenotypeQuality
all individuals: 8578
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 2364
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2244
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variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498486528606108e-5
allele num: 66734
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.41e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.70766e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.06e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.88e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.42e-1

QD
type: SiteQuality
SIO_000300: 1.28e1

VQSLOD
type: SiteQuality
SIO_000300: 1.52e0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2295
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variant carriers: 0

GenotypeQuality
all individuals: 7
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2244
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variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1036
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8578
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43418
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498486528606108e-5
allele num: 66734
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.70766e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.52e0

MQRankSum
type: SiteQuality
SIO_000300: -1.88e-1

QD
type: SiteQuality
SIO_000300: 1.28e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.41e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.42e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.06e0

GenotypeQuality
all individuals: 43437
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8584
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variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.75e1
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GenotypeQuality
all individuals: 2348
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2243
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 410
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variant carriers: 0

GenotypeQuality
all individuals: 0
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variant carriers: 0

GenotypeQuality
all individuals: 10
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GenotypeQuality
all individuals: 321
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variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2296
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1035
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.996793431028799e-5
allele num: 66738
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.04e-1

MQ
type: SiteQuality
SIO_000300: 5.965e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 5.061e0

VQSLOD
type: SiteQuality
SIO_000300: 7.84e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.019e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.77e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.4e-1

DP
type: SiteQuality
SIO_000300: 1.707038e6

QD
type: SiteQuality
SIO_000300: 1.412e1

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 321
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2294
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 410
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variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1033
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498351813005694e-5
allele num: 66740
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.95e1

InbreedingCoeff
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FS
type: SiteQuality
SIO_000300: 7.232e0

BaseQRankSum
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SIO_000300: -4.782e0

QD
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SIO_000300: 1.691e1

MQRankSum
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SIO_000300: -2.71e-1

VQSLOD
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ClippingRankSum
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DP
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ReadPosRankSum
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66740
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
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InbreedingCoeff
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VQSLOD
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BaseQRankSum
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FS
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ReadPosRankSum
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QD
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MQ
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ClippingRankSum
type: SiteQuality
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66740
num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.611687812379854e-5
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

QD
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VQSLOD
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ReadPosRankSum
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ClippingRankSum
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DP
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SIO_000300: 1.707004e6

BaseQRankSum
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.958e1

FS
type: SiteQuality
SIO_000300: 2.671e0

MQRankSum
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SIO_000300: 1.1e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 9
allele frequency: 8.650519031141869e-4
allele num: 10404
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 9
allele frequency: 1.34855704396296e-4
allele num: 66738
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.93e0

QD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.742e0

BaseQRankSum
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SIO_000300: 1.95e-1

MQRankSum
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SIO_000300: -1.85e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.97e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQ
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SIO_000300: 5.959e1

DP
type: SiteQuality
SIO_000300: 1.707124e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.21e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.498441620714457e-5
allele num: 66736
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

ClippingRankSum
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SIO_000300: -1.815e0

DP
type: SiteQuality
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BaseQRankSum
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MQ
type: SiteQuality
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FS
type: SiteQuality
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InbreedingCoeff
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MQRankSum
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QD
type: SiteQuality
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ReadPosRankSum
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VQSLOD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.19871737241152e-4
allele num: 66738
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

African
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allele frequency: 9.611687812379854e-5
allele num: 10404
num of homozygotes: 0

MQRankSum
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ReadPosRankSum
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QD
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DP
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MQ
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ClippingRankSum
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InbreedingCoeff
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FS
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BaseQRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66738
num of homozygotes: 0

South Asian
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DP
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ClippingRankSum
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QD
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MQ
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InbreedingCoeff
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ReadPosRankSum
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BaseQRankSum
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FS
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MQRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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African
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East Asian
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Latino
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allele frequency: 0.0e0
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European (Finnish)
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MQ
type: SiteQuality
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MQRankSum
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BaseQRankSum
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FS
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ClippingRankSum
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InbreedingCoeff
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VQSLOD
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DP
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QD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele num: 66738
num of homozygotes: 0

East Asian
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African
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allele frequency: 0.0e0
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European (Finnish)
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Other
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Latino
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South Asian
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MQRankSum
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DP
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ClippingRankSum
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MQ
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VQSLOD
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InbreedingCoeff
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QD
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FS
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ReadPosRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Other
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allele frequency: 0.0e0
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66738
num of homozygotes: 0

South Asian
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allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8654
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

FS
type: SiteQuality
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MQRankSum
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VQSLOD
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DP
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InbreedingCoeff
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BaseQRankSum
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ReadPosRankSum
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SIO_000300: -7.199999999999999e-2

QD
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MQ
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SIO_000300: 5.944e1

ClippingRankSum
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SIO_000300: 4.72e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

European (Non-Finnish)
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allele count: 5
allele frequency: 7.491983577571999e-5
allele num: 66738
num of homozygotes: 0

Latino
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allele frequency: 2.591568762957844e-4
allele num: 11576
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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South Asian
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allele frequency: 2.422480620155039e-4
allele num: 16512
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VQSLOD
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BaseQRankSum
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MQ
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ReadPosRankSum
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DP
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MQRankSum
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ClippingRankSum
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FS
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InbreedingCoeff
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele num: 908
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 2
allele frequency: 3.027550711474417e-4
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 20
allele frequency: 2.996973057212216e-4
allele num: 66734
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11576
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East Asian
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allele num: 8654
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ReadPosRankSum
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BaseQRankSum
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FS
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InbreedingCoeff
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QD
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DP
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MQRankSum
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MQ
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VQSLOD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66734
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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Other
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East Asian
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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South Asian
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allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

MQ
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DP
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VQSLOD
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ClippingRankSum
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ReadPosRankSum
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QD
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BaseQRankSum
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SIO_000300: -3.96e0

FS
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SIO_000300: 3.447e0

MQRankSum
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
allele num: 10404
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East Asian
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allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6602
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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BaseQRankSum
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MQRankSum
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ClippingRankSum
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MQ
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InbreedingCoeff
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FS
type: SiteQuality
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ReadPosRankSum
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QD
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DP
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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European (Finnish)
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South Asian
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European (Non-Finnish)
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allele count: 3
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allele num: 66732
num of homozygotes: 0

African
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allele frequency: 9.611687812379854e-5
allele num: 10404
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MQ
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DP
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ClippingRankSum
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InbreedingCoeff
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MQRankSum
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FS
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QD
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VQSLOD
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ReadPosRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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Other
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European (Non-Finnish)
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allele num: 66730
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European (Finnish)
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East Asian
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African
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South Asian
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QD
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VQSLOD
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InbreedingCoeff
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FS
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DP
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MQRankSum
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BaseQRankSum
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ClippingRankSum
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MQ
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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East Asian
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South Asian
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African
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Latino
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Other
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European (Non-Finnish)
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ClippingRankSum
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ReadPosRankSum
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BaseQRankSum
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FS
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QD
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InbreedingCoeff
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DP
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VQSLOD
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MQRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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South Asian
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Other
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Latino
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European (Finnish)
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European (Non-Finnish)
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MQ
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BaseQRankSum
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ReadPosRankSum
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InbreedingCoeff
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QD
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ClippingRankSum
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MQRankSum
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DP
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FS
type: SiteQuality
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2310
bin: 9.75e1
variant carriers: 5

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.211240310077519e-4
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498711108446736e-5
allele num: 66724
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.611687812379854e-5
allele num: 10404
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.707749e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.7e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.11e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.24e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-2

VQSLOD
type: SiteQuality
SIO_000300: 5.88e0

MQ
type: SiteQuality
SIO_000300: 5.962e1

MQRankSum
type: SiteQuality
SIO_000300: 2.91e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.328e1

GenotypeQuality
all individuals: 3
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2228
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 314
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8574
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43526
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2273
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1014
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2310
bin: 9.75e1
variant carriers: 104

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.211240310077519e-4
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 5
allele frequency: 4.319281271596407e-4
allele num: 11576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 96
allele frequency: 9.22722029988466e-3
allele num: 10404
num of homozygotes: 1

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.997422216893472e-5
allele num: 66724
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.7e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.24e-1

DP
type: SiteQuality
SIO_000300: 1.707749e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.11e0

MQRankSum
type: SiteQuality
SIO_000300: 2.91e-1

MQ
type: SiteQuality
SIO_000300: 5.962e1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.328e1

VQSLOD
type: SiteQuality
SIO_000300: 5.88e0

GenotypeQuality
all individuals: 3
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2233
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43610
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 315
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1016
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8589
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498576352465158e-5
allele num: 66730
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.727712508638562e-4
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.16e-1

QD
type: SiteQuality
SIO_000300: 1.085e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.37e-1

FS
type: SiteQuality
SIO_000300: 1.97e0

MQRankSum
type: SiteQuality
SIO_000300: -8.500000000000001e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.4e0

DP
type: SiteQuality
SIO_000300: 1.700709e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.7e-1

GenotypeQuality
all individuals: 2233
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2276
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 401
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1014
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43601
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 315
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.613535858488752e-5
allele num: 10402
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 18
allele frequency: 2.697437434437285e-4
allele num: 66730
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.951e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.15e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 5.18e0

DP
type: SiteQuality
SIO_000300: 1.7013e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.15e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.01e-1

QD
type: SiteQuality
SIO_000300: 1.19e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.74e-1

GenotypeQuality
all individuals: 296
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2349
bin: 9.75e1
variant carriers: 712

GenotypeQuality
all individuals: 6
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 370
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1000
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2216
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43556
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8579
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 11
allele frequency: 1.057285659361784e-3
allele num: 10404
num of homozygotes: 0

South Asian
type: Population
allele count: 20
allele frequency: 1.211240310077519e-3
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 623
allele frequency: 9.33641050233785e-3
allele num: 66728
num of homozygotes: 3

European (Finnish)
type: Population
allele count: 33
allele frequency: 5.001515610791149e-3
allele num: 6598
num of homozygotes: 0

Other
type: Population
allele count: 7
allele frequency: 7.709251101321586e-3
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 21
allele frequency: 1.814725198755617e-3
allele num: 11572
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.26e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.1e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 4.07e0

MQ
type: SiteQuality
SIO_000300: 5.964e1

QD
type: SiteQuality
SIO_000300: 1.32e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.14e-1

FS
type: SiteQuality
SIO_000300: 5.37e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.32e0

DP
type: SiteQuality
SIO_000300: 1.726033e6

GenotypeQuality
all individuals: 13
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1643
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2286
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 297
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44029
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8677
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 374
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1015
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155535012710885e-4
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66716
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 7.36e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.981e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.42e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.24e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 4.37e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.45e-1

DP
type: SiteQuality
SIO_000300: 1.67539e6

QD
type: SiteQuality
SIO_000300: 7.66e0

GenotypeQuality
all individuals: 16
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2281
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 295
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43995
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 373
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8679
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 31
allele frequency: 1.878104931540046e-3
allele num: 16506
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.611687812379854e-5
allele num: 10404
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.594706798131811e-4
allele num: 11562
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 34
allele frequency: 5.096687153350322e-4
allele num: 66710
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.17e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.55e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.66e-2

DP
type: SiteQuality
SIO_000300: 1.679074e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.01e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.88e0

MQRankSum
type: SiteQuality
SIO_000300: 2.45e-1

FS
type: SiteQuality
SIO_000300: 5.580000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.65e-1

MQ
type: SiteQuality
SIO_000300: 5.969e1

GenotypeQuality
all individuals: 21
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2279
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1011
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43998
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8672
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1610
bin: 9.75e1
variant carriers: 71

GenotypeQuality
all individuals: 294
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2232
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 8
allele frequency: 6.920415224913495e-4
allele num: 11560
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.998500749625187e-5
allele num: 66700
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6564
num of homozygotes: 0

African
type: Population
allele count: 63
allele frequency: 6.056527590847914e-3
allele num: 10402
num of homozygotes: 2

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.17e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.81e0

DP
type: SiteQuality
SIO_000300: 1.675659e6

QD
type: SiteQuality
SIO_000300: 1.284e1

FS
type: SiteQuality
SIO_000300: 5.620000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.639999999999999e-1

MQ
type: SiteQuality
SIO_000300: 5.959e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.25e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.04e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.13e-1

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 289
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2222
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1591
bin: 9.75e1
variant carriers: 223

GenotypeQuality
all individuals: 44051
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1006
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2281
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8677
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 16
allele frequency: 1.384322547153487e-3
allele num: 11558
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 3
allele frequency: 3.311258278145695e-3
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 6
allele frequency: 9.143553794574825e-4
allele num: 6562
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 170
allele frequency: 2.548725637181409e-3
allele num: 66700
num of homozygotes: 1

African
type: Population
allele count: 7
allele frequency: 6.729475100942127e-4
allele num: 10402
num of homozygotes: 0

South Asian
type: Population
allele count: 23
allele frequency: 1.393432691142615e-3
allele num: 16506
num of homozygotes: 1

QD
type: SiteQuality
SIO_000300: 1.248e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.37e-2

MQ
type: SiteQuality
SIO_000300: 5.967e1

MQRankSum
type: SiteQuality
SIO_000300: 3.89e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.676923e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.35e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.32e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.32e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.101e0

GenotypeQuality
all individuals: 2222
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
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variant carriers: 0

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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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Latino
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allele frequency: 5.191209551825575e-4
allele num: 11558
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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Other
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South Asian
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VQSLOD
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MQRankSum
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MQ
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DP
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FS
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ClippingRankSum
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QD
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InbreedingCoeff
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ReadPosRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6550
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European (Non-Finnish)
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allele frequency: 1.499430216517723e-5
allele num: 66692
num of homozygotes: 0

African
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South Asian
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ReadPosRankSum
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BaseQRankSum
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DP
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MQRankSum
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ClippingRankSum
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MQ
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FS
type: SiteQuality
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VQSLOD
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QD
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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Other
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African
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allele frequency: 6.729475100942127e-4
allele num: 10402
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European (Non-Finnish)
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allele frequency: 2.999760019198464e-5
allele num: 66672
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East Asian
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allele num: 8650
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South Asian
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FS
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DP
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ClippingRankSum
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QD
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MQRankSum
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BaseQRankSum
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ReadPosRankSum
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InbreedingCoeff
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VQSLOD
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
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South Asian
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European (Non-Finnish)
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allele num: 66680
num of homozygotes: 0

African
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Other
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Latino
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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VQSLOD
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InbreedingCoeff
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MQRankSum
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ReadPosRankSum
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BaseQRankSum
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FS
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DP
type: SiteQuality
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QD
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ClippingRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.981e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6534
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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Latino
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allele count: 0
allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.500105007350515e-5
allele num: 66662
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African
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Other
type: Population
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MQRankSum
type: SiteQuality
SIO_000300: -8.1e-2

BaseQRankSum
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FS
type: SiteQuality
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QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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DP
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InbreedingCoeff
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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MQ
type: SiteQuality
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VQSLOD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 3.000300030003e-5
allele num: 66660
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Other
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South Asian
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MQRankSum
type: SiteQuality
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VQSLOD
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FS
type: SiteQuality
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ReadPosRankSum
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QD
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ClippingRankSum
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DP
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InbreedingCoeff
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BaseQRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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East Asian
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European (Finnish)
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African
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South Asian
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Latino
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Other
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MQRankSum
type: SiteQuality
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VQSLOD
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ClippingRankSum
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FS
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MQ
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InbreedingCoeff
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DP
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QD
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BaseQRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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South Asian
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European (Non-Finnish)
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African
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Latino
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Other
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European (Finnish)
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DP
type: SiteQuality
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FS
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MQ
type: SiteQuality
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ReadPosRankSum
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ClippingRankSum
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VQSLOD
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BaseQRankSum
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MQRankSum
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QD
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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African
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Other
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Latino
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European (Non-Finnish)
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South Asian
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East Asian
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VQSLOD
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InbreedingCoeff
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FS
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ReadPosRankSum
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QD
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MQ
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BaseQRankSum
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ClippingRankSum
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MQRankSum
type: SiteQuality
SIO_000300: 1.01e0

DP
type: SiteQuality
SIO_000300: 1.62139e6

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 312
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8572
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11418
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.141751627564181e-5
allele num: 16282
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10278
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6282
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66102
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.45e0

DP
type: SiteQuality
SIO_000300: 1.620227e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

QD
type: SiteQuality
SIO_000300: 1.087e1

MQ
type: SiteQuality
SIO_000300: 5.976e1

FS
type: SiteQuality
SIO_000300: 6.5e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.58e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.817e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.87e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.24e-1

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 254
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variant carriers: 0

GenotypeQuality
all individuals: 2066
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11366
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8536
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10228
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65852
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6236
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.165988407941794e-5
allele num: 16218
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.726e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.81e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.499e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.6e-2

MQ
type: SiteQuality
SIO_000300: 5.89e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -7.16e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.68e-1

DP
type: SiteQuality
SIO_000300: 1.60737e6

GenotypeQuality
all individuals: 1904
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 18
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variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.930486593843098e-5
allele num: 10070
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6076
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8398
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11206
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16068
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.536900992838042e-5
allele num: 65066
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.3e-2

QD
type: SiteQuality
SIO_000300: 6.67e0

FS
type: SiteQuality
SIO_000300: 2.009e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.82e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.42e-1

VQSLOD
type: SiteQuality
SIO_000300: -6.677999999999999e-1

DP
type: SiteQuality
SIO_000300: 1.561584e6

ClippingRankSum
type: SiteQuality
SIO_000300: 5.73e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.232859636000998e-5
allele num: 16044
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6060
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10044
num of homozygotes: 0

East Asian
type: Population
allele count: 4
allele frequency: 4.770992366412214e-4
allele num: 8384
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11194
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.53955106690889e-5
allele num: 64954
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.502e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.71e-1

FS
type: SiteQuality
SIO_000300: 7.093e0

DP
type: SiteQuality
SIO_000300: 1.555753e6

MQRankSum
type: SiteQuality
SIO_000300: -1.91e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.91e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.43e0

QD
type: SiteQuality
SIO_000300: 1.129e1

GenotypeQuality
all individuals: 9
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 281
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GenotypeQuality
all individuals: 238
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8306
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9984
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5996
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.548898733000836e-5
allele num: 64562
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11092
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15990
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.43e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 3.49e0

DP
type: SiteQuality
SIO_000300: 1.535308e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.93e-1

QD
type: SiteQuality
SIO_000300: 1.18e1

FS
type: SiteQuality
SIO_000300: 2.849e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.92e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.0e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 6

GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5946
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.554194771688788e-5
allele num: 64342
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9952
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8262
num of homozygotes: 0

Latino
type: Population
allele count: 5
allele frequency: 4.528165187466039e-4
allele num: 11042
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15948
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.521917e6

VQSLOD
type: SiteQuality
SIO_000300: 2.24e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

MQRankSum
type: SiteQuality
SIO_000300: -9.0e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.64e-1

FS
type: SiteQuality
SIO_000300: 6.46e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.68e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.603e0

QD
type: SiteQuality
SIO_000300: 1.27e1

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11042
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64342
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.004823151125402e-4
allele num: 9952
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15948
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5946
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8262
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -9.0e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.24e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.603e0

FS
type: SiteQuality
SIO_000300: 6.46e-1

DP
type: SiteQuality
SIO_000300: 1.521917e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.64e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

QD
type: SiteQuality
SIO_000300: 1.27e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.68e-1

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 4621
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GenotypeQuality
all individuals: 272
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9952
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.811266074986415e-4
allele num: 11042
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15948
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8262
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64342
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5946
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.68e-1

MQRankSum
type: SiteQuality
SIO_000300: -9.0e-2

VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.521917e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

BaseQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 6.46e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5916
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64164
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10998
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9894
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15914
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8216
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.162790697674419e-3
allele num: 860
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.21e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.2e-2

MQRankSum
type: SiteQuality
SIO_000300: -5.49e-1

FS
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MQ
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BaseQRankSum
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ClippingRankSum
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DP
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InbreedingCoeff
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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Latino
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South Asian
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European (Non-Finnish)
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African
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East Asian
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Other
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MQRankSum
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BaseQRankSum
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ClippingRankSum
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FS
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MQ
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VQSLOD
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QD
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InbreedingCoeff
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DP
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele num: 50866
num of homozygotes: 0

East Asian
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num of homozygotes: 0

European (Finnish)
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Other
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Latino
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South Asian
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African
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QD
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MQRankSum
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FS
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ClippingRankSum
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VQSLOD
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DP
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BaseQRankSum
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InbreedingCoeff
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MQ
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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African
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Latino
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European (Finnish)
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East Asian
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South Asian
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European (Non-Finnish)
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FS
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DP
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ClippingRankSum
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VQSLOD
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InbreedingCoeff
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ReadPosRankSum
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MQRankSum
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MQ
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QD
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BaseQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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num of homozygotes: 0

European (Non-Finnish)
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Latino
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African
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South Asian
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Other
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European (Finnish)
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VQSLOD
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InbreedingCoeff
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BaseQRankSum
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FS
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ClippingRankSum
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DP
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ReadPosRankSum
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MQRankSum
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MQ
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Other
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Latino
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East Asian
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European (Finnish)
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South Asian
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European (Non-Finnish)
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allele frequency: 8.649720902338884e-3
allele num: 43354
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FS
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ClippingRankSum
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VQSLOD
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MQ
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MQRankSum
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QD
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InbreedingCoeff
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ReadPosRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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East Asian
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African
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Latino
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MQRankSum
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DP
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QD
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ClippingRankSum
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VQSLOD
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Finnish)
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African
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Latino
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East Asian
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European (Non-Finnish)
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DP
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MQ
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ClippingRankSum
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BaseQRankSum
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QD
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VQSLOD
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FS
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InbreedingCoeff
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MQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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African
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European (Non-Finnish)
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Latino
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MQ
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FS
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MQRankSum
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ClippingRankSum
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InbreedingCoeff
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QD
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DP
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BaseQRankSum
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GenotypeDepth
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GenotypeQuality
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European (Non-Finnish)
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African
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East Asian
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FS
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DP
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VQSLOD
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InbreedingCoeff
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ReadPosRankSum
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QD
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MQ
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South Asian
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European (Non-Finnish)
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East Asian
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European (Finnish)
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African
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Latino
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ReadPosRankSum
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ClippingRankSum
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MQRankSum
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VQSLOD
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QD
type: SiteQuality
SIO_000300: 8.9e0

FS
type: SiteQuality
SIO_000300: 8.88e-1

DP
type: SiteQuality
SIO_000300: 8.77371e5

MQ
type: SiteQuality
SIO_000300: 5.882e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.9e-1

GenotypeDepth
all individuals: 51
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 7370
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 227
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 1899
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6131
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 116
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 22449
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 54
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3895
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 291
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 32
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 64
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1165
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 64
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 96
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 49
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 16298
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 109
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 178
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 47
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 241
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1139
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4197
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1664
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12035
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 424
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 162
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 178
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 301
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1855
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 283
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 983
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 33995
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 788
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 226
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1318
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 352
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 293
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.772387025228722e-5
allele num: 36070
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5176
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4552
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11668
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 554
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6124
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3394
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.452e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.04e-2

FS
type: SiteQuality
SIO_000300: 3.137e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.39e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.77e0

DP
type: SiteQuality
SIO_000300: 8.60391e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.06e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.55e-1

QD
type: SiteQuality
SIO_000300: 1.255e1

GenotypeDepth
all individuals: 32
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9451
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 51
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4732
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 23847
bin: 7.5e0
variant carriers: 1

GenotypeDepth
all individuals: 13519
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 95
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 178
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 282
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1009
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 50
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 963
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 110
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 5438
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 47
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 64
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 116
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 54
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 226
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 64
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 623
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1148
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1046
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 983
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 402
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 154
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32764
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 9883
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 265
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9343
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1448
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 277
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 319
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1230
bin: 1.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3434
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10446
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3568
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5146
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 28004
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2460
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 462
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.31e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.223e0

MQRankSum
type: SiteQuality
SIO_000300: 7.31e-1

DP
type: SiteQuality
SIO_000300: 7.49319e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.97e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.31e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.31e-1

QD
type: SiteQuality
SIO_000300: 1.339e1

MQ
type: SiteQuality
SIO_000300: 5.616e1