8-133764200-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133764200
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 133764200
    reference: chr 8
allele count: 10
allele frequency: 8.253957772752034e-5
allele num: 121154
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000428397
  ensembl transcript: ENST00000519016
  gene symbol: TMEM71
  hgvsc: ENST00000519016.1:c.-147G>A
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000430239
  ensembl transcript: ENST00000519304
  gene symbol: TMEM71
  hgvsc: ENST00000519304.1:c.145G>A
  hgvsp: ENSP00000430239.1:p.Gly49Ser
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000430847
  ensembl transcript: ENST00000522334
  gene symbol: TMEM71
  hgvsc: ENST00000522334.1:c.-147G>A
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000367133
  ensembl transcript: ENST00000377901
  gene symbol: TMEM71
  hgvsc: ENST00000377901.4:c.145G>A
  hgvsp: ENSP00000367133.4:p.Gly49Ser
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000349296
  ensembl transcript: ENST00000356838
  gene symbol: TMEM71
  hgvsc: ENST00000356838.3:c.145G>A
  hgvsp: ENSP00000349296.3:p.Gly49Ser
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000428228
  ensembl transcript: ENST00000523829
  gene symbol: TMEM71
  hgvsc: ENST00000523829.1:c.145G>A
  hgvsp: ENSP00000428228.1:p.Gly49Ser
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165071
  ensembl transcript: ENST00000517538
  gene symbol: TMEM71
  hgvsc: ENST00000517538.1:n.350G>A
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000429873
  ensembl transcript: ENST00000519187
  gene symbol: TMEM71
  hgvsc: ENST00000519187.1:c.145G>A
  hgvsp: ENSP00000429873.1:p.Gly49Ser
  variant of: http://identifiers.org/hgnc/26572
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9159
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15343
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2556
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5338
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23074
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1497
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 931
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1366
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9623
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34066
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Gly49Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: Other
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: MQ

8-133764201-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133764201
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 133764201
    reference: chr 8
allele count: 8
allele frequency: 6.60414740457007e-5
allele num: 121136
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000349296
  ensembl transcript: ENST00000356838
  gene symbol: TMEM71
  hgvsc: ENST00000356838.3:c.144C>T
  hgvsp: ENST00000356838.3:c.144C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000428228
  ensembl transcript: ENST00000523829
  gene symbol: TMEM71
  hgvsc: ENST00000523829.1:c.144C>T
  hgvsp: ENST00000523829.1:c.144C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000430847
  ensembl transcript: ENST00000522334
  gene symbol: TMEM71
  hgvsc: ENST00000522334.1:c.-148C>T
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000429873
  ensembl transcript: ENST00000519187
  gene symbol: TMEM71
  hgvsc: ENST00000519187.1:c.144C>T
  hgvsp: ENST00000519187.1:c.144C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165071
  ensembl transcript: ENST00000517538
  gene symbol: TMEM71
  hgvsc: ENST00000517538.1:n.349C>T
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000430239
  ensembl transcript: ENST00000519304
  gene symbol: TMEM71
  hgvsc: ENST00000519304.1:c.144C>T
  hgvsp: ENST00000519304.1:c.144C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000367133
  ensembl transcript: ENST00000377901
  gene symbol: TMEM71
  hgvsc: ENST00000377901.4:c.144C>T
  hgvsp: ENST00000377901.4:c.144C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000428397
  ensembl transcript: ENST00000519016
  gene symbol: TMEM71
  hgvsc: ENST00000519016.1:c.-148C>T
  variant of: http://identifiers.org/hgnc/26572
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2558
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23076
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1500
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9134
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5337
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15333
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34027
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9620
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1363
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Cys48Cys
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD

8-133764207-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133764207
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 133764207
    reference: chr 8
allele count: 2
allele frequency: 1.651718613217052e-5
allele num: 121086
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000349296
  ensembl transcript: ENST00000356838
  gene symbol: TMEM71
  hgvsc: ENST00000356838.3:c.138T>C
  hgvsp: ENST00000356838.3:c.138T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165071
  ensembl transcript: ENST00000517538
  gene symbol: TMEM71
  hgvsc: ENST00000517538.1:n.343T>C
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000367133
  ensembl transcript: ENST00000377901
  gene symbol: TMEM71
  hgvsc: ENST00000377901.4:c.138T>C
  hgvsp: ENST00000377901.4:c.138T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000430239
  ensembl transcript: ENST00000519304
  gene symbol: TMEM71
  hgvsc: ENST00000519304.1:c.138T>C
  hgvsp: ENST00000519304.1:c.138T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000428397
  ensembl transcript: ENST00000519016
  gene symbol: TMEM71
  hgvsc: ENST00000519016.1:c.-154T>C
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000429873
  ensembl transcript: ENST00000519187
  gene symbol: TMEM71
  hgvsc: ENST00000519187.1:c.138T>C
  hgvsp: ENST00000519187.1:c.138T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000430847
  ensembl transcript: ENST00000522334
  gene symbol: TMEM71
  hgvsc: ENST00000522334.1:c.-154T>C
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000428228
  ensembl transcript: ENST00000523829
  gene symbol: TMEM71
  hgvsc: ENST00000523829.1:c.138T>C
  hgvsp: ENST00000523829.1:c.138T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/26572
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5337
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2555
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23060
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15322
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9101
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 932
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1495
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34010
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2058
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1364
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Phe46Phe
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: Other
reference allele: A
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum

8-133764211-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133764211
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 133764211
    reference: chr 8
allele count: 2
allele frequency: 1.652510162937502e-5
allele num: 121028
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000367133
  ensembl transcript: ENST00000377901
  gene symbol: TMEM71
  hgvsc: ENST00000377901.4:c.134C>T
  hgvsp: ENSP00000367133.4:p.Ser45Phe
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000429873
  ensembl transcript: ENST00000519187
  gene symbol: TMEM71
  hgvsc: ENST00000519187.1:c.134C>T
  hgvsp: ENSP00000429873.1:p.Ser45Phe
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000428397
  ensembl transcript: ENST00000519016
  gene symbol: TMEM71
  hgvsc: ENST00000519016.1:c.-158C>T
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000428228
  ensembl transcript: ENST00000523829
  gene symbol: TMEM71
  hgvsc: ENST00000523829.1:c.134C>T
  hgvsp: ENSP00000428228.1:p.Ser45Phe
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165071
  ensembl transcript: ENST00000517538
  gene symbol: TMEM71
  hgvsc: ENST00000517538.1:n.339C>T
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000430239
  ensembl transcript: ENST00000519304
  gene symbol: TMEM71
  hgvsc: ENST00000519304.1:c.134C>T
  hgvsp: ENSP00000430239.1:p.Ser45Phe
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000430847
  ensembl transcript: ENST00000522334
  gene symbol: TMEM71
  hgvsc: ENST00000522334.1:c.-158C>T
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000349296
  ensembl transcript: ENST00000356838
  gene symbol: TMEM71
  hgvsc: ENST00000356838.3:c.134C>T
  hgvsp: ENSP00000349296.3:p.Ser45Phe
  variant of: http://identifiers.org/hgnc/26572
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5339
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 933
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15323
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9036
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1495
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2553
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23040
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 355
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ser45Phe
num of homozygotes: 0
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum

8-133764214-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133764214
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 133764214
    reference: chr 8
allele count: 1
allele frequency: 8.264736024331383e-6
allele num: 120996
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165071
  ensembl transcript: ENST00000517538
  gene symbol: TMEM71
  hgvsc: ENST00000517538.1:n.336A>G
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000428397
  ensembl transcript: ENST00000519016
  gene symbol: TMEM71
  hgvsc: ENST00000519016.1:c.-161A>G
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000429873
  ensembl transcript: ENST00000519187
  gene symbol: TMEM71
  hgvsc: ENST00000519187.1:c.131A>G
  hgvsp: ENSP00000429873.1:p.His44Arg
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000367133
  ensembl transcript: ENST00000377901
  gene symbol: TMEM71
  hgvsc: ENST00000377901.4:c.131A>G
  hgvsp: ENSP00000367133.4:p.His44Arg
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000349296
  ensembl transcript: ENST00000356838
  gene symbol: TMEM71
  hgvsc: ENST00000356838.3:c.131A>G
  hgvsp: ENSP00000349296.3:p.His44Arg
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000430239
  ensembl transcript: ENST00000519304
  gene symbol: TMEM71
  hgvsc: ENST00000519304.1:c.131A>G
  hgvsp: ENSP00000430239.1:p.His44Arg
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000428228
  ensembl transcript: ENST00000523829
  gene symbol: TMEM71
  hgvsc: ENST00000523829.1:c.131A>G
  hgvsp: ENSP00000428228.1:p.His44Arg
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000430847
  ensembl transcript: ENST00000522334
  gene symbol: TMEM71
  hgvsc: ENST00000522334.1:c.-161A>G
  variant of: http://identifiers.org/hgnc/26572
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15316
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9002
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23009
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1496
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 934
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2555
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5338
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 395
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 905
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
hgvs: p.His44Arg
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
reference allele: T
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: FS

8-133764214-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133764214
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 133764214
    reference: chr 8
allele count: 11
allele frequency: 9.091209626764521e-5
allele num: 120996
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000428397
  ensembl transcript: ENST00000519016
  gene symbol: TMEM71
  hgvsc: ENST00000519016.1:c.-161A>C
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000430847
  ensembl transcript: ENST00000522334
  gene symbol: TMEM71
  hgvsc: ENST00000522334.1:c.-161A>C
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000367133
  ensembl transcript: ENST00000377901
  gene symbol: TMEM71
  hgvsc: ENST00000377901.4:c.131A>C
  hgvsp: ENSP00000367133.4:p.His44Pro
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000430239
  ensembl transcript: ENST00000519304
  gene symbol: TMEM71
  hgvsc: ENST00000519304.1:c.131A>C
  hgvsp: ENSP00000430239.1:p.His44Pro
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000349296
  ensembl transcript: ENST00000356838
  gene symbol: TMEM71
  hgvsc: ENST00000356838.3:c.131A>C
  hgvsp: ENSP00000349296.3:p.His44Pro
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000429873
  ensembl transcript: ENST00000519187
  gene symbol: TMEM71
  hgvsc: ENST00000519187.1:c.131A>C
  hgvsp: ENSP00000429873.1:p.His44Pro
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165071
  ensembl transcript: ENST00000517538
  gene symbol: TMEM71
  hgvsc: ENST00000517538.1:n.336A>C
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000428228
  ensembl transcript: ENST00000523829
  gene symbol: TMEM71
  hgvsc: ENST00000523829.1:c.131A>C
  hgvsp: ENSP00000428228.1:p.His44Pro
  variant of: http://identifiers.org/hgnc/26572
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15316
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 23009
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1496
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9002
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5338
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2555
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 934
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2058
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2547
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6595
  bin: 9.75e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
hgvs: p.His44Pro
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: DP

8-133764233-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133764233
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 133764233
    reference: chr 8
allele count: 3
allele frequency: 2.494512073438436e-5
allele num: 120264
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000430239
  ensembl transcript: ENST00000519304
  gene symbol: TMEM71
  hgvsc: ENST00000519304.1:c.112G>C
  hgvsp: ENSP00000430239.1:p.Asp38His
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000430847
  ensembl transcript: ENST00000522334
  gene symbol: TMEM71
  hgvsc: ENST00000522334.1:c.-180G>C
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000428228
  ensembl transcript: ENST00000523829
  gene symbol: TMEM71
  hgvsc: ENST00000523829.1:c.112G>C
  hgvsp: ENSP00000428228.1:p.Asp38His
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000349296
  ensembl transcript: ENST00000356838
  gene symbol: TMEM71
  hgvsc: ENST00000356838.3:c.112G>C
  hgvsp: ENSP00000349296.3:p.Asp38His
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000428397
  ensembl transcript: ENST00000519016
  gene symbol: TMEM71
  hgvsc: ENST00000519016.1:c.-180G>C
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000367133
  ensembl transcript: ENST00000377901
  gene symbol: TMEM71
  hgvsc: ENST00000377901.4:c.112G>C
  hgvsp: ENSP00000367133.4:p.Asp38His
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000429873
  ensembl transcript: ENST00000519187
  gene symbol: TMEM71
  hgvsc: ENST00000519187.1:c.112G>C
  hgvsp: ENSP00000429873.1:p.Asp38His
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165071
  ensembl transcript: ENST00000517538
  gene symbol: TMEM71
  hgvsc: ENST00000517538.1:n.317G>C
  variant of: http://identifiers.org/hgnc/26572
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1160
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2553
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22620
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5317
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1491
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15149
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8141
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 239
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 227
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1378
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Asp38His
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP

http://identifiers.org/exac.variant/8-133764235-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133764235
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 133764235
    reference: chr 8
allele count: 2
allele frequency: 1.664807631478183e-5
allele num: 120134
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000428228
  ensembl transcript: ENST00000523829
  gene symbol: TMEM71
  hgvsc: ENST00000523829.1:c.110G>T
  hgvsp: ENSP00000428228.1:p.Cys37Phe
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000428397
  ensembl transcript: ENST00000519016
  gene symbol: TMEM71
  hgvsc: ENST00000519016.1:c.-182G>T
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000429873
  ensembl transcript: ENST00000519187
  gene symbol: TMEM71
  hgvsc: ENST00000519187.1:c.110G>T
  hgvsp: ENSP00000429873.1:p.Cys37Phe
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000367133
  ensembl transcript: ENST00000377901
  gene symbol: TMEM71
  hgvsc: ENST00000377901.4:c.110G>T
  hgvsp: ENSP00000367133.4:p.Cys37Phe
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000430239
  ensembl transcript: ENST00000519304
  gene symbol: TMEM71
  hgvsc: ENST00000519304.1:c.110G>T
  hgvsp: ENSP00000430239.1:p.Cys37Phe
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000430847
  ensembl transcript: ENST00000522334
  gene symbol: TMEM71
  hgvsc: ENST00000522334.1:c.-182G>T
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000349296
  ensembl transcript: ENST00000356838
  gene symbol: TMEM71
  hgvsc: ENST00000356838.3:c.110G>T
  hgvsp: ENSP00000349296.3:p.Cys37Phe
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000165071
  ensembl transcript: ENST00000517538
  gene symbol: TMEM71
  hgvsc: ENST00000517538.1:n.315G>T
  variant of: http://identifiers.org/hgnc/26572
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15068
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7963
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22497
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5310
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2547
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1406
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1490
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 933
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1619
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2456
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Cys37Phe
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum

8-133764244-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133764244
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 133764244
    reference: chr 8
allele count: 5
allele frequency: 4.202386955790889e-5
allele num: 118980
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000430847
  ensembl transcript: ENST00000522334
  gene symbol: TMEM71
  hgvsc: ENST00000522334.1:c.-190-1G>A
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000165071
  ensembl transcript: ENST00000517538
  gene symbol: TMEM71
  hgvsc: ENST00000517538.1:n.307-1G>A
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000367133
  ensembl transcript: ENST00000377901
  gene symbol: TMEM71
  hgvsc: ENST00000377901.4:c.102-1G>A
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000429873
  ensembl transcript: ENST00000519187
  gene symbol: TMEM71
  hgvsc: ENST00000519187.1:c.102-1G>A
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000428397
  ensembl transcript: ENST00000519016
  gene symbol: TMEM71
  hgvsc: ENST00000519016.1:c.-190-1G>A
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000430239
  ensembl transcript: ENST00000519304
  gene symbol: TMEM71
  hgvsc: ENST00000519304.1:c.102-1G>A
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000428228
  ensembl transcript: ENST00000523829
  gene symbol: TMEM71
  hgvsc: ENST00000523829.1:c.102-1G>A
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: true
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000349296
  ensembl transcript: ENST00000356838
  gene symbol: TMEM71
  hgvsc: ENST00000356838.3:c.102-1G>A
  variant of: http://identifiers.org/hgnc/26572
canonical: true
consequence: splice acceptor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1643
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1487
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5183
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14296
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 21093
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2901
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6952
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1108
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2539
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 931
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1345
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 725
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 884
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2009
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2376
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29567
  bin: 6.25e1
  variant carriers: 0
hgvs: c.102-1G>A
num of homozygotes: 0
population: Other
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ

8-133764245-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133764245
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 133764245
    reference: chr 8
allele count: 2
allele frequency: 1.684210526315789e-5
allele num: 118750
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000367133
  ensembl transcript: ENST00000377901
  gene symbol: TMEM71
  hgvsc: ENST00000377901.4:c.102-2A>T
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000428397
  ensembl transcript: ENST00000519016
  gene symbol: TMEM71
  hgvsc: ENST00000519016.1:c.-190-2A>T
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000165071
  ensembl transcript: ENST00000517538
  gene symbol: TMEM71
  hgvsc: ENST00000517538.1:n.307-2A>T
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000430847
  ensembl transcript: ENST00000522334
  gene symbol: TMEM71
  hgvsc: ENST00000522334.1:c.-190-2A>T
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000430239
  ensembl transcript: ENST00000519304
  gene symbol: TMEM71
  hgvsc: ENST00000519304.1:c.102-2A>T
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000428228
  ensembl transcript: ENST00000523829
  gene symbol: TMEM71
  hgvsc: ENST00000523829.1:c.102-2A>T
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: true
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000349296
  ensembl transcript: ENST00000356838
  gene symbol: TMEM71
  hgvsc: ENST00000356838.3:c.102-2A>T
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000429873
  ensembl transcript: ENST00000519187
  gene symbol: TMEM71
  hgvsc: ENST00000519187.1:c.102-2A>T
  variant of: http://identifiers.org/hgnc/26572
canonical: true
consequence: splice acceptor
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1203
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14145
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6839
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3095
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2537
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20765
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1961
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5169
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1483
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 931
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2366
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 792
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8674
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1096
  bin: 3.25e1
  variant carriers: 0
hgvs: c.102-2A>T
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
population: South Asian
population: African
population: European (Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum

http://identifiers.org/exac.variant/8-133764247-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133764247
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 133764247
    reference: chr 8
allele count: 1
allele frequency: 8.475581848693913e-6
allele num: 117986
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000349296
  ensembl transcript: ENST00000356838
  gene symbol: TMEM71
  hgvsc: ENST00000356838.3:c.102-4T>G
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000428397
  ensembl transcript: ENST00000519016
  gene symbol: TMEM71
  hgvsc: ENST00000519016.1:c.-190-4T>G
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000429873
  ensembl transcript: ENST00000519187
  gene symbol: TMEM71
  hgvsc: ENST00000519187.1:c.102-4T>G
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000367133
  ensembl transcript: ENST00000377901
  gene symbol: TMEM71
  hgvsc: ENST00000377901.4:c.102-4T>G
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl transcript: ENST00000517538
  gene symbol: TMEM71
  hgvsc: ENST00000517538.1:n.307-4T>G
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000430239
  ensembl transcript: ENST00000519304
  gene symbol: TMEM71
  hgvsc: ENST00000519304.1:c.102-4T>G
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000430847
  ensembl transcript: ENST00000522334
  gene symbol: TMEM71
  hgvsc: ENST00000522334.1:c.-190-4T>G
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000428228
  ensembl transcript: ENST00000523829
  gene symbol: TMEM71
  hgvsc: ENST00000523829.1:c.102-4T>G
  variant of: http://identifiers.org/hgnc/26572
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3766
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13447
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19722
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1480
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2522
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6529
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3126
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1552
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 929
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5024
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1342
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7925
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 360
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27050
  bin: 6.25e1
  variant carriers: 0
hgvs: c.102-4T>G
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: South Asian
reference allele: A
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff

8-133764262-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133764262
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 133764262
    reference: chr 8
allele count: 2
allele frequency: 1.757809066779166e-5
allele num: 113778
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000428228
  ensembl transcript: ENST00000523829
  gene symbol: TMEM71
  hgvsc: ENST00000523829.1:c.102-19G>A
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000430847
  ensembl transcript: ENST00000522334
  gene symbol: TMEM71
  hgvsc: ENST00000522334.1:c.-190-19G>A
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl transcript: ENST00000517538
  gene symbol: TMEM71
  hgvsc: ENST00000517538.1:n.307-19G>A
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000429873
  ensembl transcript: ENST00000519187
  gene symbol: TMEM71
  hgvsc: ENST00000519187.1:c.102-19G>A
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000367133
  ensembl transcript: ENST00000377901
  gene symbol: TMEM71
  hgvsc: ENST00000377901.4:c.102-19G>A
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000349296
  ensembl transcript: ENST00000356838
  gene symbol: TMEM71
  hgvsc: ENST00000356838.3:c.102-19G>A
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000428397
  ensembl transcript: ENST00000519016
  gene symbol: TMEM71
  hgvsc: ENST00000519016.1:c.-190-19G>A
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000430239
  ensembl transcript: ENST00000519304
  gene symbol: TMEM71
  hgvsc: ENST00000519304.1:c.102-19G>A
  variant of: http://identifiers.org/hgnc/26572
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4256
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8769
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8496
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 927
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14571
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3102
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1476
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2440
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5038
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8784
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2257
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2847
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2903
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3299
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7696
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 467
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
population: African
population: Latino
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ

8-133764263-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133764263
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 133764263
    reference: chr 8
allele count: 36243
allele frequency: 3.216225330115008e-1
allele num: 112688
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000367133
  ensembl transcript: ENST00000377901
  gene symbol: TMEM71
  hgvsc: ENST00000377901.4:c.102-20C>T
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000429873
  ensembl transcript: ENST00000519187
  gene symbol: TMEM71
  hgvsc: ENST00000519187.1:c.102-20C>T
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000430239
  ensembl transcript: ENST00000519304
  gene symbol: TMEM71
  hgvsc: ENST00000519304.1:c.102-20C>T
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000428397
  ensembl transcript: ENST00000519016
  gene symbol: TMEM71
  hgvsc: ENST00000519016.1:c.-190-20C>T
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000428228
  ensembl transcript: ENST00000523829
  gene symbol: TMEM71
  hgvsc: ENST00000523829.1:c.102-20C>T
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000430847
  ensembl transcript: ENST00000522334
  gene symbol: TMEM71
  hgvsc: ENST00000522334.1:c.-190-20C>T
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl transcript: ENST00000517538
  gene symbol: TMEM71
  hgvsc: ENST00000517538.1:n.307-20C>T
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000349296
  ensembl transcript: ENST00000356838
  gene symbol: TMEM71
  hgvsc: ENST00000356838.3:c.102-20C>T
  variant of: http://identifiers.org/hgnc/26572
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5605
  bin: 1.75e1
  variant carriers: 3838
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 7.25e1
  variant carriers: 373
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 8.25e1
  variant carriers: 214
genotype depth: GenotypeDepth
  all individuals: 3215
  bin: 7.5e0
  variant carriers: 426
genotype depth: GenotypeDepth
  all individuals: 8604
  bin: 2.25e1
  variant carriers: 5586
genotype depth: GenotypeDepth
  all individuals: 9160
  bin: 1.25e1
  variant carriers: 1718
genotype depth: GenotypeDepth
  all individuals: 13687
  bin: 2.75e1
  variant carriers: 5592
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 5.25e1
  variant carriers: 862
genotype depth: GenotypeDepth
  all individuals: 7780
  bin: 3.25e1
  variant carriers: 4206
genotype depth: GenotypeDepth
  all individuals: 1325
  bin: 4.75e1
  variant carriers: 1058
genotype depth: GenotypeDepth
  all individuals: 2166
  bin: 4.25e1
  variant carriers: 1667
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 2.5e0
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 9.25e1
  variant carriers: 110
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 9.75e1
  variant carriers: 509
genotype depth: GenotypeDepth
  all individuals: 671
  bin: 6.25e1
  variant carriers: 613
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.75e1
  variant carriers: 155
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 6.75e1
  variant carriers: 485
genotype depth: GenotypeDepth
  all individuals: 847
  bin: 5.75e1
  variant carriers: 749
genotype depth: GenotypeDepth
  all individuals: 3796
  bin: 3.75e1
  variant carriers: 2748
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 7.75e1
  variant carriers: 300
genotype quality: GenotypeQuality
  all individuals: 28062
  bin: 9.75e1
  variant carriers: 26864
genotype quality: GenotypeQuality
  all individuals: 7071
  bin: 2.25e1
  variant carriers: 107
genotype quality: GenotypeQuality
  all individuals: 498
  bin: 7.5e0
  variant carriers: 55
genotype quality: GenotypeQuality
  all individuals: 1047
  bin: 7.75e1
  variant carriers: 430
genotype quality: GenotypeQuality
  all individuals: 658
  bin: 9.25e1
  variant carriers: 380
genotype quality: GenotypeQuality
  all individuals: 434
  bin: 5.75e1
  variant carriers: 207
genotype quality: GenotypeQuality
  all individuals: 1776
  bin: 2.75e1
  variant carriers: 107
genotype quality: GenotypeQuality
  all individuals: 418
  bin: 2.5e0
  variant carriers: 30
num of homozygotes: 5629
population: East Asian
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum

8-133764277-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133764277
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 133764277
    reference: chr 8
allele count: 2
allele frequency: 1.955684196116011e-5
allele num: 102266
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000428397
  ensembl transcript: ENST00000519016
  gene symbol: TMEM71
  hgvsc: ENST00000519016.1:c.-190-34A>C
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000429873
  ensembl transcript: ENST00000519187
  gene symbol: TMEM71
  hgvsc: ENST00000519187.1:c.102-34A>C
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000430239
  ensembl transcript: ENST00000519304
  gene symbol: TMEM71
  hgvsc: ENST00000519304.1:c.102-34A>C
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000430847
  ensembl transcript: ENST00000522334
  gene symbol: TMEM71
  hgvsc: ENST00000522334.1:c.-190-34A>C
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000349296
  ensembl transcript: ENST00000356838
  gene symbol: TMEM71
  hgvsc: ENST00000356838.3:c.102-34A>C
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000428228
  ensembl transcript: ENST00000523829
  gene symbol: TMEM71
  hgvsc: ENST00000523829.1:c.102-34A>C
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000367133
  ensembl transcript: ENST00000377901
  gene symbol: TMEM71
  hgvsc: ENST00000377901.4:c.102-34A>C
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl transcript: ENST00000517538
  gene symbol: TMEM71
  hgvsc: ENST00000517538.1:n.307-34A>C
  variant of: http://identifiers.org/hgnc/26572
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7362
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3842
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 982
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4203
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20709
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9776
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1761
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1740
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8317
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4768
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 867
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7607
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 873
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10788
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 580
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1322
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff

8-133764278-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133764278
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 133764278
    reference: chr 8
allele count: 1
allele frequency: 9.845426799251748e-6
allele num: 101570
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000430239
  ensembl transcript: ENST00000519304
  gene symbol: TMEM71
  hgvsc: ENST00000519304.1:c.102-35T>C
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000430847
  ensembl transcript: ENST00000522334
  gene symbol: TMEM71
  hgvsc: ENST00000522334.1:c.-190-35T>C
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000428228
  ensembl transcript: ENST00000523829
  gene symbol: TMEM71
  hgvsc: ENST00000523829.1:c.102-35T>C
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000367133
  ensembl transcript: ENST00000377901
  gene symbol: TMEM71
  hgvsc: ENST00000377901.4:c.102-35T>C
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl transcript: ENST00000517538
  gene symbol: TMEM71
  hgvsc: ENST00000517538.1:n.307-35T>C
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000428397
  ensembl transcript: ENST00000519016
  gene symbol: TMEM71
  hgvsc: ENST00000519016.1:c.-190-35T>C
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000429873
  ensembl transcript: ENST00000519187
  gene symbol: TMEM71
  hgvsc: ENST00000519187.1:c.102-35T>C
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000349296
  ensembl transcript: ENST00000356838
  gene symbol: TMEM71
  hgvsc: ENST00000356838.3:c.102-35T>C
  variant of: http://identifiers.org/hgnc/26572
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7663
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3638
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10844
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1849
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7481
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1721
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3941
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 981
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20561
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 394
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2162
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 380
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2677
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 860
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 934
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 904
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: South Asian
reference allele: A
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum

8-133764284-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133764284
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 133764284
    reference: chr 8
allele count: 2
allele frequency: 2.038902255025894e-5
allele num: 98092
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000367133
  ensembl transcript: ENST00000377901
  gene symbol: TMEM71
  hgvsc: ENST00000377901.4:c.102-41A>G
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000430847
  ensembl transcript: ENST00000522334
  gene symbol: TMEM71
  hgvsc: ENST00000522334.1:c.-190-41A>G
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000349296
  ensembl transcript: ENST00000356838
  gene symbol: TMEM71
  hgvsc: ENST00000356838.3:c.102-41A>G
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000429873
  ensembl transcript: ENST00000519187
  gene symbol: TMEM71
  hgvsc: ENST00000519187.1:c.102-41A>G
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000428397
  ensembl transcript: ENST00000519016
  gene symbol: TMEM71
  hgvsc: ENST00000519016.1:c.-190-41A>G
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl transcript: ENST00000517538
  gene symbol: TMEM71
  hgvsc: ENST00000517538.1:n.307-41A>G
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000428228
  ensembl transcript: ENST00000523829
  gene symbol: TMEM71
  hgvsc: ENST00000523829.1:c.102-41A>G
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000430239
  ensembl transcript: ENST00000519304
  gene symbol: TMEM71
  hgvsc: ENST00000519304.1:c.102-41A>G
  variant of: http://identifiers.org/hgnc/26572
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19616
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5274
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 962
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9059
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13138
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2967
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1995
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4006
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1632
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1598
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2625
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 389
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14699
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2195
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8201
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 750
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2538
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ

8-133764285-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133764285
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 133764285
    reference: chr 8
allele count: 1
allele frequency: 1.024065540194572e-5
allele num: 97650
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000367133
  ensembl transcript: ENST00000377901
  gene symbol: TMEM71
  hgvsc: ENST00000377901.4:c.102-42T>C
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl transcript: ENST00000517538
  gene symbol: TMEM71
  hgvsc: ENST00000517538.1:n.307-42T>C
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000349296
  ensembl transcript: ENST00000356838
  gene symbol: TMEM71
  hgvsc: ENST00000356838.3:c.102-42T>C
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000428228
  ensembl transcript: ENST00000523829
  gene symbol: TMEM71
  hgvsc: ENST00000523829.1:c.102-42T>C
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000429873
  ensembl transcript: ENST00000519187
  gene symbol: TMEM71
  hgvsc: ENST00000519187.1:c.102-42T>C
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000428397
  ensembl transcript: ENST00000519016
  gene symbol: TMEM71
  hgvsc: ENST00000519016.1:c.-190-42T>C
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000430847
  ensembl transcript: ENST00000522334
  gene symbol: TMEM71
  hgvsc: ENST00000522334.1:c.-190-42T>C
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000430239
  ensembl transcript: ENST00000519304
  gene symbol: TMEM71
  hgvsc: ENST00000519304.1:c.102-42T>C
  variant of: http://identifiers.org/hgnc/26572
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2890
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4151
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2007
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9311
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1617
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13307
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19447
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 958
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4954
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 312
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 747
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2603
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5519
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1877
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14405
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6098
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 682
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
reference allele: A
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum

8-133764289-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133764289
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 133764289
    reference: chr 8
allele count: 1
allele frequency: 1.050508446087906e-5
allele num: 95192
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000428228
  ensembl transcript: ENST00000523829
  gene symbol: TMEM71
  hgvsc: ENST00000523829.1:c.102-46G>A
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000429873
  ensembl transcript: ENST00000519187
  gene symbol: TMEM71
  hgvsc: ENST00000519187.1:c.102-46G>A
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000349296
  ensembl transcript: ENST00000356838
  gene symbol: TMEM71
  hgvsc: ENST00000356838.3:c.102-46G>A
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000430847
  ensembl transcript: ENST00000522334
  gene symbol: TMEM71
  hgvsc: ENST00000522334.1:c.-190-46G>A
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000367133
  ensembl transcript: ENST00000377901
  gene symbol: TMEM71
  hgvsc: ENST00000377901.4:c.102-46G>A
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl transcript: ENST00000517538
  gene symbol: TMEM71
  hgvsc: ENST00000517538.1:n.307-46G>A
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000430239
  ensembl transcript: ENST00000519304
  gene symbol: TMEM71
  hgvsc: ENST00000519304.1:c.102-46G>A
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000428397
  ensembl transcript: ENST00000519016
  gene symbol: TMEM71
  hgvsc: ENST00000519016.1:c.-190-46G>A
  variant of: http://identifiers.org/hgnc/26572
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2027
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1601
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18627
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13126
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 946
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4048
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10341
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2590
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5322
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13400
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 848
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8211
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1918
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5142
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 477
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6239
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2478
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: Latino
population: Other
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP

8-133764291-A-ATTAATT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133764291
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 133764297
    reference: chr 8
allele count: 1
allele frequency: 1.064690600911375e-5
allele num: 93924
alternate allele: ATTAATT
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl transcript: ENST00000517538
  gene symbol: TMEM71
  hgvsc: ENST00000517538.1:n.307-49_307-48insAATTAA
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000430239
  ensembl transcript: ENST00000519304
  gene symbol: TMEM71
  hgvsc: ENST00000519304.1:c.102-49_102-48insAATTAA
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000367133
  ensembl transcript: ENST00000377901
  gene symbol: TMEM71
  hgvsc: ENST00000377901.4:c.102-49_102-48insAATTAA
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000430847
  ensembl transcript: ENST00000522334
  gene symbol: TMEM71
  hgvsc: ENST00000522334.1:c.-190-49_-190-48insAATTAA
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000428397
  ensembl transcript: ENST00000519016
  gene symbol: TMEM71
  hgvsc: ENST00000519016.1:c.-190-49_-190-48insAATTAA
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000349296
  ensembl transcript: ENST00000356838
  gene symbol: TMEM71
  hgvsc: ENST00000356838.3:c.102-49_102-48insAATTAA
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000429873
  ensembl transcript: ENST00000519187
  gene symbol: TMEM71
  hgvsc: ENST00000519187.1:c.102-49_102-48insAATTAA
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000428228
  ensembl transcript: ENST00000523829
  gene symbol: TMEM71
  hgvsc: ENST00000523829.1:c.102-49_102-48insAATTAA
  variant of: http://identifiers.org/hgnc/26572
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 5878
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 941
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2436
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1582
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2050
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18233
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10891
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3636
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12972
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 573
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 852
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2539
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 563
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6270
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 492
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2076
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1631
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2663
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum

8-133764293-T-TTTATTCATTCATTTATTCACTCAACTATCTTTTATAAGGAG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133764293
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 133764334
    reference: chr 8
allele count: 1
allele frequency: 1.072271070126528e-5
allele num: 93260
alternate allele: TTTATTCATTCATTTATTCACTCAACTATCTTTTATAAGGAG
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000367133
  ensembl transcript: ENST00000377901
  gene symbol: TMEM71
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000429873
  ensembl transcript: ENST00000519187
  gene symbol: TMEM71
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000349296
  ensembl transcript: ENST00000356838
  gene symbol: TMEM71
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000428228
  ensembl transcript: ENST00000523829
  gene symbol: TMEM71
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl transcript: ENST00000517538
  gene symbol: TMEM71
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000428397
  ensembl transcript: ENST00000519016
  gene symbol: TMEM71
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000430847
  ensembl transcript: ENST00000522334
  gene symbol: TMEM71
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000430239
  ensembl transcript: ENST00000519304
  gene symbol: TMEM71
  variant of: http://identifiers.org/hgnc/26572
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10990
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18197
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1578
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2058
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6012
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3546
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12909
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2384
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 942
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2139
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 695
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1547
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8272
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 846
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3505
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2556
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 269
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 563
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1868
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum

http://identifiers.org/exac.variant/8-133769430-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133769430
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 133769430
    reference: chr 8
allele count: 1
allele frequency: 8.694744896184747e-6
allele num: 115012
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl transcript: ENST00000517538
  gene symbol: TMEM71
  hgvsc: ENST00000517538.1:n.306+50G>T
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000428397
  ensembl transcript: ENST00000519016
  gene symbol: TMEM71
  hgvsc: ENST00000519016.1:c.-191+1656G>T
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000349296
  ensembl transcript: ENST00000356838
  gene symbol: TMEM71
  hgvsc: ENST00000356838.3:c.101+50G>T
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000430239
  ensembl transcript: ENST00000519304
  gene symbol: TMEM71
  hgvsc: ENST00000519304.1:c.101+50G>T
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000428228
  ensembl transcript: ENST00000523829
  gene symbol: TMEM71
  hgvsc: ENST00000523829.1:c.101+50G>T
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000367133
  ensembl transcript: ENST00000377901
  gene symbol: TMEM71
  hgvsc: ENST00000377901.4:c.101+50G>T
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000430847
  ensembl transcript: ENST00000522334
  gene symbol: TMEM71
  hgvsc: ENST00000522334.1:c.-191+50G>T
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000429873
  ensembl transcript: ENST00000519187
  gene symbol: TMEM71
  hgvsc: ENST00000519187.1:c.101+50G>T
  variant of: http://identifiers.org/hgnc/26572
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14032
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12213
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10659
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5969
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8092
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2821
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1352
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2592
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1986
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3032
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2126
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1530
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2398
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 236
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4881
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2377
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum

10-69793956-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69793956
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 69793956
    reference: chr 10
allele count: 1
allele frequency: 8.303716743614441e-6
allele num: 120428
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000277817
  ensembl transcript: ENST00000277817
  gene symbol: HERC4
  hgvsc: ENST00000277817.6:c.134-13T>C
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000378624
  ensembl transcript: ENST00000395198
  gene symbol: HERC4
  hgvsc: ENST00000395198.3:c.464-13T>C
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000406171
  ensembl transcript: ENST00000427635
  gene symbol: HERC4
  hgvsc: ENST00000427635.2:c.453-13T>C
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000362804
  ensembl transcript: ENST00000373700
  gene symbol: HERC4
  hgvsc: ENST00000373700.4:c.464-13T>C
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000427191
  ensembl transcript: ENST00000513996
  gene symbol: HERC4
  hgvsc: ENST00000513996.1:c.536-13T>C
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000423671
  ensembl transcript: ENST00000473533
  gene symbol: HERC4
  hgvsc: ENST00000473533.2:c.304-13T>C
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000378614
  ensembl transcript: ENST00000395187
  gene symbol: HERC4
  hgvsc: ENST00000395187.2:c.304-13T>C
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl transcript: ENST00000463478
  gene symbol: HERC4
  hgvsc: ENST00000463478.1:n.274-13T>C
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000416504
  ensembl transcript: ENST00000412272
  gene symbol: HERC4
  hgvsc: ENST00000412272.2:c.464-13T>C
  variant of: http://identifiers.org/hgnc/24521
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1215
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3644
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40878
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11488
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: A
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP

10-69793958-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69793958
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 69793958
    reference: chr 10
allele count: 1
allele frequency: 8.307993951780402e-6
allele num: 120366
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000362804
  ensembl transcript: ENST00000373700
  gene symbol: HERC4
  hgvsc: ENST00000373700.4:c.464-15A>G
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000378624
  ensembl transcript: ENST00000395198
  gene symbol: HERC4
  hgvsc: ENST00000395198.3:c.464-15A>G
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000427191
  ensembl transcript: ENST00000513996
  gene symbol: HERC4
  hgvsc: ENST00000513996.1:c.536-15A>G
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000378614
  ensembl transcript: ENST00000395187
  gene symbol: HERC4
  hgvsc: ENST00000395187.2:c.304-15A>G
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl transcript: ENST00000463478
  gene symbol: HERC4
  hgvsc: ENST00000463478.1:n.274-15A>G
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000277817
  ensembl transcript: ENST00000277817
  gene symbol: HERC4
  hgvsc: ENST00000277817.6:c.134-15A>G
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000406171
  ensembl transcript: ENST00000427635
  gene symbol: HERC4
  hgvsc: ENST00000427635.2:c.453-15A>G
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000423671
  ensembl transcript: ENST00000473533
  gene symbol: HERC4
  hgvsc: ENST00000473533.2:c.304-15A>G
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000416504
  ensembl transcript: ENST00000412272
  gene symbol: HERC4
  hgvsc: ENST00000412272.2:c.464-15A>G
  variant of: http://identifiers.org/hgnc/24521
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 990
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1307
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40793
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3630
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11452
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 631
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: African
reference allele: T
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum

8-133769433-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133769433
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 133769433
    reference: chr 8
allele count: 4
allele frequency: 3.48535280483767e-5
allele num: 114766
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000349296
  ensembl transcript: ENST00000356838
  gene symbol: TMEM71
  hgvsc: ENST00000356838.3:c.101+47G>A
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000429873
  ensembl transcript: ENST00000519187
  gene symbol: TMEM71
  hgvsc: ENST00000519187.1:c.101+47G>A
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl transcript: ENST00000517538
  gene symbol: TMEM71
  hgvsc: ENST00000517538.1:n.306+47G>A
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000428228
  ensembl transcript: ENST00000523829
  gene symbol: TMEM71
  hgvsc: ENST00000523829.1:c.101+47G>A
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000430239
  ensembl transcript: ENST00000519304
  gene symbol: TMEM71
  hgvsc: ENST00000519304.1:c.101+47G>A
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000430847
  ensembl transcript: ENST00000522334
  gene symbol: TMEM71
  hgvsc: ENST00000522334.1:c.-191+47G>A
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000367133
  ensembl transcript: ENST00000377901
  gene symbol: TMEM71
  hgvsc: ENST00000377901.4:c.101+47G>A
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000428397
  ensembl transcript: ENST00000519016
  gene symbol: TMEM71
  hgvsc: ENST00000519016.1:c.-191+1653G>A
  variant of: http://identifiers.org/hgnc/26572
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2843
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10954
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10548
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2554
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15321
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6137
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 758
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8020
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1357
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1899
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 564
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 576
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2884
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4047
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6101
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3191
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
reference allele: C
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum

8-133769434-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133769434
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 133769434
    reference: chr 8
allele count: 4
allele frequency: 3.481409274474307e-5
allele num: 114896
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000367133
  ensembl transcript: ENST00000377901
  gene symbol: TMEM71
  hgvsc: ENST00000377901.4:c.101+46C>T
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000428228
  ensembl transcript: ENST00000523829
  gene symbol: TMEM71
  hgvsc: ENST00000523829.1:c.101+46C>T
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000430847
  ensembl transcript: ENST00000522334
  gene symbol: TMEM71
  hgvsc: ENST00000522334.1:c.-191+46C>T
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000429873
  ensembl transcript: ENST00000519187
  gene symbol: TMEM71
  hgvsc: ENST00000519187.1:c.101+46C>T
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl transcript: ENST00000517538
  gene symbol: TMEM71
  hgvsc: ENST00000517538.1:n.306+46C>T
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000428397
  ensembl transcript: ENST00000519016
  gene symbol: TMEM71
  hgvsc: ENST00000519016.1:c.-191+1652C>T
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000430239
  ensembl transcript: ENST00000519304
  gene symbol: TMEM71
  hgvsc: ENST00000519304.1:c.101+46C>T
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000349296
  ensembl transcript: ENST00000356838
  gene symbol: TMEM71
  hgvsc: ENST00000356838.3:c.101+46C>T
  variant of: http://identifiers.org/hgnc/26572
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11121
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2545
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2853
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7960
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9455
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6283
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16156
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1366
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21860
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3536
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1845
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 564
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4176
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6180
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 452
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
reference allele: G
site quality: MQ
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD

8-133769438-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133769438
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 133769438
    reference: chr 8
allele count: 28
allele frequency: 2.425460404358899e-4
allele num: 115442
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000430239
  ensembl transcript: ENST00000519304
  gene symbol: TMEM71
  hgvsc: ENST00000519304.1:c.101+42C>T
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000428397
  ensembl transcript: ENST00000519016
  gene symbol: TMEM71
  hgvsc: ENST00000519016.1:c.-191+1648C>T
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000430847
  ensembl transcript: ENST00000522334
  gene symbol: TMEM71
  hgvsc: ENST00000522334.1:c.-191+42C>T
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl transcript: ENST00000517538
  gene symbol: TMEM71
  hgvsc: ENST00000517538.1:n.306+42C>T
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000367133
  ensembl transcript: ENST00000377901
  gene symbol: TMEM71
  hgvsc: ENST00000377901.4:c.101+42C>T
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000429873
  ensembl transcript: ENST00000519187
  gene symbol: TMEM71
  hgvsc: ENST00000519187.1:c.101+42C>T
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000428228
  ensembl transcript: ENST00000523829
  gene symbol: TMEM71
  hgvsc: ENST00000523829.1:c.101+42C>T
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000349296
  ensembl transcript: ENST00000356838
  gene symbol: TMEM71
  hgvsc: ENST00000356838.3:c.101+42C>T
  variant of: http://identifiers.org/hgnc/26572
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11961
  bin: 2.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 5179
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6846
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2949
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2475
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7202
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 19785
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1377
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2123
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 382
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1635
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6487
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 247
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 864
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD

8-133769438-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133769438
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 133769438
    reference: chr 8
allele count: 1
allele frequency: 8.662358586996067e-6
allele num: 115442
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000367133
  ensembl transcript: ENST00000377901
  gene symbol: TMEM71
  hgvsc: ENST00000377901.4:c.101+42C>A
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000429873
  ensembl transcript: ENST00000519187
  gene symbol: TMEM71
  hgvsc: ENST00000519187.1:c.101+42C>A
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000428397
  ensembl transcript: ENST00000519016
  gene symbol: TMEM71
  hgvsc: ENST00000519016.1:c.-191+1648C>A
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000430847
  ensembl transcript: ENST00000522334
  gene symbol: TMEM71
  hgvsc: ENST00000522334.1:c.-191+42C>A
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl transcript: ENST00000517538
  gene symbol: TMEM71
  hgvsc: ENST00000517538.1:n.306+42C>A
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000430239
  ensembl transcript: ENST00000519304
  gene symbol: TMEM71
  hgvsc: ENST00000519304.1:c.101+42C>A
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000428228
  ensembl transcript: ENST00000523829
  gene symbol: TMEM71
  hgvsc: ENST00000523829.1:c.101+42C>A
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000349296
  ensembl transcript: ENST00000356838
  gene symbol: TMEM71
  hgvsc: ENST00000356838.3:c.101+42C>A
  variant of: http://identifiers.org/hgnc/26572
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2475
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6846
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5179
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2949
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11961
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7202
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19785
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1377
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6487
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3188
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1895
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 864
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3039
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1635
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: DP

http://identifiers.org/exac.variant/8-133769448-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133769448
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 133769448
    reference: chr 8
allele count: 3
allele frequency: 2.56357670221493e-5
allele num: 117024
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl transcript: ENST00000517538
  gene symbol: TMEM71
  hgvsc: ENST00000517538.1:n.306+32T>G
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000349296
  ensembl transcript: ENST00000356838
  gene symbol: TMEM71
  hgvsc: ENST00000356838.3:c.101+32T>G
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000430239
  ensembl transcript: ENST00000519304
  gene symbol: TMEM71
  hgvsc: ENST00000519304.1:c.101+32T>G
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000367133
  ensembl transcript: ENST00000377901
  gene symbol: TMEM71
  hgvsc: ENST00000377901.4:c.101+32T>G
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000429873
  ensembl transcript: ENST00000519187
  gene symbol: TMEM71
  hgvsc: ENST00000519187.1:c.101+32T>G
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000430847
  ensembl transcript: ENST00000522334
  gene symbol: TMEM71
  hgvsc: ENST00000522334.1:c.-191+32T>G
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000428397
  ensembl transcript: ENST00000519016
  gene symbol: TMEM71
  hgvsc: ENST00000519016.1:c.-191+1638T>G
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000428228
  ensembl transcript: ENST00000523829
  gene symbol: TMEM71
  hgvsc: ENST00000523829.1:c.101+32T>G
  variant of: http://identifiers.org/hgnc/26572
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3072
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2054
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3050
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1423
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26306
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7624
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13543
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1381
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 307
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2288
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36895
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2272
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: Latino
reference allele: A
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD

8-133769449-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133769449
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 133769449
    reference: chr 8
allele count: 2
allele frequency: 1.70695070326369e-5
allele num: 117168
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000430239
  ensembl transcript: ENST00000519304
  gene symbol: TMEM71
  hgvsc: ENST00000519304.1:c.101+31A>G
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000429873
  ensembl transcript: ENST00000519187
  gene symbol: TMEM71
  hgvsc: ENST00000519187.1:c.101+31A>G
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000349296
  ensembl transcript: ENST00000356838
  gene symbol: TMEM71
  hgvsc: ENST00000356838.3:c.101+31A>G
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000428397
  ensembl transcript: ENST00000519016
  gene symbol: TMEM71
  hgvsc: ENST00000519016.1:c.-191+1637A>G
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000430847
  ensembl transcript: ENST00000522334
  gene symbol: TMEM71
  hgvsc: ENST00000522334.1:c.-191+31A>G
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000428228
  ensembl transcript: ENST00000523829
  gene symbol: TMEM71
  hgvsc: ENST00000523829.1:c.101+31A>G
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000367133
  ensembl transcript: ENST00000377901
  gene symbol: TMEM71
  hgvsc: ENST00000377901.4:c.101+31A>G
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl transcript: ENST00000517538
  gene symbol: TMEM71
  hgvsc: ENST00000517538.1:n.306+31A>G
  variant of: http://identifiers.org/hgnc/26572
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26600
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7667
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13592
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1429
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3076
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2018
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2787
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 723
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 823
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3026
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2292
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 582
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 243
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: T
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP

8-133769451-A-AT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133769451
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 133769452
    reference: chr 8
allele count: 5
allele frequency: 4.262574595055413e-5
allele num: 117300
alternate allele: AT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000429873
  ensembl transcript: ENST00000519187
  gene symbol: TMEM71
  hgvsc: ENST00000519187.1:c.101+28dupA
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000428397
  ensembl transcript: ENST00000519016
  gene symbol: TMEM71
  hgvsc: ENST00000519016.1:c.-191+1634dupA
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl transcript: ENST00000517538
  gene symbol: TMEM71
  hgvsc: ENST00000517538.1:n.306+28dupA
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000367133
  ensembl transcript: ENST00000377901
  gene symbol: TMEM71
  hgvsc: ENST00000377901.4:c.101+28dupA
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000430847
  ensembl transcript: ENST00000522334
  gene symbol: TMEM71
  hgvsc: ENST00000522334.1:c.-191+28dupA
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000428228
  ensembl transcript: ENST00000523829
  gene symbol: TMEM71
  hgvsc: ENST00000523829.1:c.101+28dupA
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000349296
  ensembl transcript: ENST00000356838
  gene symbol: TMEM71
  hgvsc: ENST00000356838.3:c.101+28dupA
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000430239
  ensembl transcript: ENST00000519304
  gene symbol: TMEM71
  hgvsc: ENST00000519304.1:c.101+28dupA
  variant of: http://identifiers.org/hgnc/26572
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13827
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2384
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26866
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3105
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1901
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7768
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1442
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3033
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 330
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 751
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2086
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37409
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 717
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: A
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum

8-133769452-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 133769452
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 133769452
    reference: chr 8
allele count: 1
allele frequency: 8.51397142711189e-6
allele num: 117454
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000430239
  ensembl transcript: ENST00000519304
  gene symbol: TMEM71
  hgvsc: ENST00000519304.1:c.101+28A>G
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000430847
  ensembl transcript: ENST00000522334
  gene symbol: TMEM71
  hgvsc: ENST00000522334.1:c.-191+28A>G
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000349296
  ensembl transcript: ENST00000356838
  gene symbol: TMEM71
  hgvsc: ENST00000356838.3:c.101+28A>G
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000428397
  ensembl transcript: ENST00000519016
  gene symbol: TMEM71
  hgvsc: ENST00000519016.1:c.-191+1634A>G
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000367133
  ensembl transcript: ENST00000377901
  gene symbol: TMEM71
  hgvsc: ENST00000377901.4:c.101+28A>G
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000428228
  ensembl transcript: ENST00000523829
  gene symbol: TMEM71
  hgvsc: ENST00000523829.1:c.101+28A>G
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl protein: ENSP00000429873
  ensembl transcript: ENST00000519187
  gene symbol: TMEM71
  hgvsc: ENST00000519187.1:c.101+28A>G
  variant of: http://identifiers.org/hgnc/26572
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000165071
  ensembl transcript: ENST00000517538
  gene symbol: TMEM71
  hgvsc: ENST00000517538.1:n.306+28A>G
  variant of: http://identifiers.org/hgnc/26572
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3106
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13872
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27045
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1851
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1447
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7777
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2233
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 784
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 653
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 240
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2018
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37875
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 287
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 987
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum

10-69793960-GA-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69793960
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 69793959
    reference: chr 10
allele count: 1
allele frequency: 8.316423272678886e-6
allele num: 120244
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000362804
  ensembl transcript: ENST00000373700
  gene symbol: HERC4
  hgvsc: ENST00000373700.4:c.464-18delT
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000277817
  ensembl transcript: ENST00000277817
  gene symbol: HERC4
  hgvsc: ENST00000277817.6:c.134-18delT
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000423671
  ensembl transcript: ENST00000473533
  gene symbol: HERC4
  hgvsc: ENST00000473533.2:c.304-18delT
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000406171
  ensembl transcript: ENST00000427635
  gene symbol: HERC4
  hgvsc: ENST00000427635.2:c.453-18delT
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000416504
  ensembl transcript: ENST00000412272
  gene symbol: HERC4
  hgvsc: ENST00000412272.2:c.464-18delT
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000378624
  ensembl transcript: ENST00000395198
  gene symbol: HERC4
  hgvsc: ENST00000395198.3:c.464-18delT
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000427191
  ensembl transcript: ENST00000513996
  gene symbol: HERC4
  hgvsc: ENST00000513996.1:c.536-18delT
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000378614
  ensembl transcript: ENST00000395187
  gene symbol: HERC4
  hgvsc: ENST00000395187.2:c.304-18delT
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl transcript: ENST00000463478
  gene symbol: HERC4
  hgvsc: ENST00000463478.1:n.274-18delT
  variant of: http://identifiers.org/hgnc/24521
canonical: true
consequence: intron
filter: VQSRTrancheINDEL96.00to97.00
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40529
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3628
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1480
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11426
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 908
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1643
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1830
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
reference allele: GA
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP

10-69793967-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69793967
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 69793967
    reference: chr 10
allele count: 30
allele frequency: 2.50945227021782e-4
allele num: 119548
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000406171
  ensembl transcript: ENST00000427635
  gene symbol: HERC4
  hgvsc: ENST00000427635.2:c.453-24A>C
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000277817
  ensembl transcript: ENST00000277817
  gene symbol: HERC4
  hgvsc: ENST00000277817.6:c.134-24A>C
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000427191
  ensembl transcript: ENST00000513996
  gene symbol: HERC4
  hgvsc: ENST00000513996.1:c.536-24A>C
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000378624
  ensembl transcript: ENST00000395198
  gene symbol: HERC4
  hgvsc: ENST00000395198.3:c.464-24A>C
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000362804
  ensembl transcript: ENST00000373700
  gene symbol: HERC4
  hgvsc: ENST00000373700.4:c.464-24A>C
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000378614
  ensembl transcript: ENST00000395187
  gene symbol: HERC4
  hgvsc: ENST00000395187.2:c.304-24A>C
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000416504
  ensembl transcript: ENST00000412272
  gene symbol: HERC4
  hgvsc: ENST00000412272.2:c.464-24A>C
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl transcript: ENST00000463478
  gene symbol: HERC4
  hgvsc: ENST00000463478.1:n.274-24A>C
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000423671
  ensembl transcript: ENST00000473533
  gene symbol: HERC4
  hgvsc: ENST00000473533.2:c.304-24A>C
  variant of: http://identifiers.org/hgnc/24521
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 987
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 4.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 38472
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 817
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10904
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 949
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3197
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3533
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 357
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4091
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3113
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: European (Finnish)
population: East Asian
population: Latino
reference allele: T
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: MQ

10-69793973-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69793973
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 69793973
    reference: chr 10
allele count: 2
allele frequency: 1.680418088020299e-5
allele num: 119018
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000378614
  ensembl transcript: ENST00000395187
  gene symbol: HERC4
  hgvsc: ENST00000395187.2:c.304-30A>C
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000362804
  ensembl transcript: ENST00000373700
  gene symbol: HERC4
  hgvsc: ENST00000373700.4:c.464-30A>C
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000427191
  ensembl transcript: ENST00000513996
  gene symbol: HERC4
  hgvsc: ENST00000513996.1:c.536-30A>C
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000378624
  ensembl transcript: ENST00000395198
  gene symbol: HERC4
  hgvsc: ENST00000395198.3:c.464-30A>C
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl transcript: ENST00000463478
  gene symbol: HERC4
  hgvsc: ENST00000463478.1:n.274-30A>C
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000277817
  ensembl transcript: ENST00000277817
  gene symbol: HERC4
  hgvsc: ENST00000277817.6:c.134-30A>C
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000423671
  ensembl transcript: ENST00000473533
  gene symbol: HERC4
  hgvsc: ENST00000473533.2:c.304-30A>C
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000406171
  ensembl transcript: ENST00000427635
  gene symbol: HERC4
  hgvsc: ENST00000427635.2:c.453-30A>C
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000416504
  ensembl transcript: ENST00000412272
  gene symbol: HERC4
  hgvsc: ENST00000412272.2:c.464-30A>C
  variant of: http://identifiers.org/hgnc/24521
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35729
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1978
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3420
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5226
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10469
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 985
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 783
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4490
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1502
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: East Asian
population: Other
population: European (Finnish)
reference allele: T
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum

10-69793994-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69793994
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 69793994
    reference: chr 10
allele count: 2
allele frequency: 1.759726890386612e-5
allele num: 113654
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000423671
  ensembl transcript: ENST00000473533
  gene symbol: HERC4
  hgvsc: ENST00000473533.2:c.304-51A>T
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000378624
  ensembl transcript: ENST00000395198
  gene symbol: HERC4
  hgvsc: ENST00000395198.3:c.464-51A>T
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000277817
  ensembl transcript: ENST00000277817
  gene symbol: HERC4
  hgvsc: ENST00000277817.6:c.134-51A>T
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000427191
  ensembl transcript: ENST00000513996
  gene symbol: HERC4
  hgvsc: ENST00000513996.1:c.536-51A>T
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000362804
  ensembl transcript: ENST00000373700
  gene symbol: HERC4
  hgvsc: ENST00000373700.4:c.464-51A>T
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000406171
  ensembl transcript: ENST00000427635
  gene symbol: HERC4
  hgvsc: ENST00000427635.2:c.453-51A>T
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000416504
  ensembl transcript: ENST00000412272
  gene symbol: HERC4
  hgvsc: ENST00000412272.2:c.464-51A>T
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000378614
  ensembl transcript: ENST00000395187
  gene symbol: HERC4
  hgvsc: ENST00000395187.2:c.304-51A>T
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl transcript: ENST00000463478
  gene symbol: HERC4
  hgvsc: ENST00000463478.1:n.274-51A>T
  variant of: http://identifiers.org/hgnc/24521
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25219
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2599
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2169
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12160
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8210
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7548
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 357
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1572
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3282
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 655
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 821
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: African
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum

10-69793995-T-TAATTTG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69793995
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 69794001
    reference: chr 10
allele count: 1
allele frequency: 8.831269759966088e-6
allele num: 113234
alternate allele: TAATTTG
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000378624
  ensembl transcript: ENST00000395198
  gene symbol: HERC4
  hgvsc: ENST00000395198.3:c.464-58_464-53dupCAAATT
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl transcript: ENST00000463478
  gene symbol: HERC4
  hgvsc: ENST00000463478.1:n.274-58_274-53dupCAAATT
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000416504
  ensembl transcript: ENST00000412272
  gene symbol: HERC4
  hgvsc: ENST00000412272.2:c.464-58_464-53dupCAAATT
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000406171
  ensembl transcript: ENST00000427635
  gene symbol: HERC4
  hgvsc: ENST00000427635.2:c.453-58_453-53dupCAAATT
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000427191
  ensembl transcript: ENST00000513996
  gene symbol: HERC4
  hgvsc: ENST00000513996.1:c.536-58_536-53dupCAAATT
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000423671
  ensembl transcript: ENST00000473533
  gene symbol: HERC4
  hgvsc: ENST00000473533.2:c.304-58_304-53dupCAAATT
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000378614
  ensembl transcript: ENST00000395187
  gene symbol: HERC4
  hgvsc: ENST00000395187.2:c.304-58_304-53dupCAAATT
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000277817
  ensembl transcript: ENST00000277817
  gene symbol: HERC4
  hgvsc: ENST00000277817.6:c.134-58_134-53dupCAAATT
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000362804
  ensembl transcript: ENST00000373700
  gene symbol: HERC4
  hgvsc: ENST00000373700.4:c.464-58_464-53dupCAAATT
  variant of: http://identifiers.org/hgnc/24521
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8697
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24610
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7557
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12141
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2273
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2614
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6038
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2338
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 645
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2638
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 831
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
reference allele: T
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum

10-69797805-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69797805
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 69797805
    reference: chr 10
allele count: 2
allele frequency: 1.753094211282914e-5
allele num: 114084
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000362804
  ensembl transcript: ENST00000373700
  gene symbol: HERC4
  hgvsc: ENST00000373700.4:c.463+45G>A
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000277817
  ensembl transcript: ENST00000277817
  gene symbol: HERC4
  hgvsc: ENST00000277817.6:c.133+45G>A
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000427191
  ensembl transcript: ENST00000513996
  gene symbol: HERC4
  hgvsc: ENST00000513996.1:c.535+45G>A
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000416504
  ensembl transcript: ENST00000412272
  gene symbol: HERC4
  hgvsc: ENST00000412272.2:c.463+45G>A
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl transcript: ENST00000463478
  gene symbol: HERC4
  hgvsc: ENST00000463478.1:n.273+45G>A
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000423671
  ensembl transcript: ENST00000473533
  gene symbol: HERC4
  hgvsc: ENST00000473533.2:c.303+45G>A
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000378614
  ensembl transcript: ENST00000395187
  gene symbol: HERC4
  hgvsc: ENST00000395187.2:c.303+45G>A
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000378624
  ensembl transcript: ENST00000395198
  gene symbol: HERC4
  hgvsc: ENST00000395198.3:c.463+45G>A
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000406171
  ensembl transcript: ENST00000427635
  gene symbol: HERC4
  hgvsc: ENST00000427635.2:c.452+45G>A
  variant of: http://identifiers.org/hgnc/24521
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1067
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7802
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4851
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 658
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1851
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2773
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9928
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16028
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12407
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 358
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3000
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1866
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5530
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4224
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: QD

10-69797809-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69797809
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 69797809
    reference: chr 10
allele count: 1
allele frequency: 8.734387282732117e-6
allele num: 114490
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000427191
  ensembl transcript: ENST00000513996
  gene symbol: HERC4
  hgvsc: ENST00000513996.1:c.535+41A>T
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000378614
  ensembl transcript: ENST00000395187
  gene symbol: HERC4
  hgvsc: ENST00000395187.2:c.303+41A>T
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000378624
  ensembl transcript: ENST00000395198
  gene symbol: HERC4
  hgvsc: ENST00000395198.3:c.463+41A>T
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl transcript: ENST00000463478
  gene symbol: HERC4
  hgvsc: ENST00000463478.1:n.273+41A>T
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000362804
  ensembl transcript: ENST00000373700
  gene symbol: HERC4
  hgvsc: ENST00000373700.4:c.463+41A>T
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000423671
  ensembl transcript: ENST00000473533
  gene symbol: HERC4
  hgvsc: ENST00000473533.2:c.303+41A>T
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000277817
  ensembl transcript: ENST00000277817
  gene symbol: HERC4
  hgvsc: ENST00000277817.6:c.133+41A>T
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000416504
  ensembl transcript: ENST00000412272
  gene symbol: HERC4
  hgvsc: ENST00000412272.2:c.463+41A>T
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000406171
  ensembl transcript: ENST00000427635
  gene symbol: HERC4
  hgvsc: ENST00000427635.2:c.452+41A>T
  variant of: http://identifiers.org/hgnc/24521
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7489
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12802
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2767
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4985
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7369
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18413
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1859
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1068
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5695
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3065
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1759
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3824
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1856
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD

10-69797812-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69797812
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 69797812
    reference: chr 10
allele count: 0
allele frequency: 0.0e0
allele num: 114724
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl transcript: ENST00000463478
  gene symbol: HERC4
  hgvsc: ENST00000463478.1:n.273+38A>G
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000362804
  ensembl transcript: ENST00000373700
  gene symbol: HERC4
  hgvsc: ENST00000373700.4:c.463+38A>G
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000427191
  ensembl transcript: ENST00000513996
  gene symbol: HERC4
  hgvsc: ENST00000513996.1:c.535+38A>G
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000423671
  ensembl transcript: ENST00000473533
  gene symbol: HERC4
  hgvsc: ENST00000473533.2:c.303+38A>G
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000378624
  ensembl transcript: ENST00000395198
  gene symbol: HERC4
  hgvsc: ENST00000395198.3:c.463+38A>G
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000406171
  ensembl transcript: ENST00000427635
  gene symbol: HERC4
  hgvsc: ENST00000427635.2:c.452+38A>G
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000378614
  ensembl transcript: ENST00000395187
  gene symbol: HERC4
  hgvsc: ENST00000395187.2:c.303+38A>G
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000416504
  ensembl transcript: ENST00000412272
  gene symbol: HERC4
  hgvsc: ENST00000412272.2:c.463+38A>G
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000277817
  ensembl transcript: ENST00000277817
  gene symbol: HERC4
  hgvsc: ENST00000277817.6:c.133+38A>G
  variant of: http://identifiers.org/hgnc/24521
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7003
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2759
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5575
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1860
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13148
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5071
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20296
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1638
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3159
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 347
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1481
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5863
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
population: African
population: Latino
reference allele: T
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff

10-69797824-GAAATA-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69797824
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 69797819
    reference: chr 10
allele count: 2
allele frequency: 1.722296855085943e-5
allele num: 116124
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000427191
  ensembl transcript: ENST00000513996
  gene symbol: HERC4
  hgvsc: ENST00000513996.1:c.535+21_535+25delTATTT
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000277817
  ensembl transcript: ENST00000277817
  gene symbol: HERC4
  hgvsc: ENST00000277817.6:c.133+21_133+25delTATTT
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000406171
  ensembl transcript: ENST00000427635
  gene symbol: HERC4
  hgvsc: ENST00000427635.2:c.452+21_452+25delTATTT
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000416504
  ensembl transcript: ENST00000412272
  gene symbol: HERC4
  hgvsc: ENST00000412272.2:c.463+21_463+25delTATTT
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000423671
  ensembl transcript: ENST00000473533
  gene symbol: HERC4
  hgvsc: ENST00000473533.2:c.303+21_303+25delTATTT
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000378624
  ensembl transcript: ENST00000395198
  gene symbol: HERC4
  hgvsc: ENST00000395198.3:c.463+21_463+25delTATTT
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl transcript: ENST00000463478
  gene symbol: HERC4
  hgvsc: ENST00000463478.1:n.273+21_273+25delTATTT
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000378614
  ensembl transcript: ENST00000395187
  gene symbol: HERC4
  hgvsc: ENST00000395187.2:c.303+21_303+25delTATTT
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000362804
  ensembl transcript: ENST00000373700
  gene symbol: HERC4
  hgvsc: ENST00000373700.4:c.463+21_463+25delTATTT
  variant of: http://identifiers.org/hgnc/24521
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2951
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5375
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27570
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1050
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1073
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2273
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1882
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14769
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1403
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 913
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 606
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 944
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: GAAATA
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: MQ

10-69797828-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69797828
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 69797828
    reference: chr 10
allele count: 4
allele frequency: 3.421084141564462e-5
allele num: 116922
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000378624
  ensembl transcript: ENST00000395198
  gene symbol: HERC4
  hgvsc: ENST00000395198.3:c.463+22A>G
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000427191
  ensembl transcript: ENST00000513996
  gene symbol: HERC4
  hgvsc: ENST00000513996.1:c.535+22A>G
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000406171
  ensembl transcript: ENST00000427635
  gene symbol: HERC4
  hgvsc: ENST00000427635.2:c.452+22A>G
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000423671
  ensembl transcript: ENST00000473533
  gene symbol: HERC4
  hgvsc: ENST00000473533.2:c.303+22A>G
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000416504
  ensembl transcript: ENST00000412272
  gene symbol: HERC4
  hgvsc: ENST00000412272.2:c.463+22A>G
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000378614
  ensembl transcript: ENST00000395187
  gene symbol: HERC4
  hgvsc: ENST00000395187.2:c.303+22A>G
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000362804
  ensembl transcript: ENST00000373700
  gene symbol: HERC4
  hgvsc: ENST00000373700.4:c.463+22A>G
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl transcript: ENST00000463478
  gene symbol: HERC4
  hgvsc: ENST00000463478.1:n.273+22A>G
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000277817
  ensembl transcript: ENST00000277817
  gene symbol: HERC4
  hgvsc: ENST00000277817.6:c.133+22A>G
  variant of: http://identifiers.org/hgnc/24521
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1946
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1885
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1879
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1076
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29115
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15112
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5422
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 605
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1998
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 497
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
population: European (Finnish)
population: Latino
reference allele: T
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/10-69797831-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69797831
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 69797831
    reference: chr 10
allele count: 2
allele frequency: 1.702620332692013e-5
allele num: 117466
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000423671
  ensembl transcript: ENST00000473533
  gene symbol: HERC4
  hgvsc: ENST00000473533.2:c.303+19T>G
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000406171
  ensembl transcript: ENST00000427635
  gene symbol: HERC4
  hgvsc: ENST00000427635.2:c.452+19T>G
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000416504
  ensembl transcript: ENST00000412272
  gene symbol: HERC4
  hgvsc: ENST00000412272.2:c.463+19T>G
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000427191
  ensembl transcript: ENST00000513996
  gene symbol: HERC4
  hgvsc: ENST00000513996.1:c.535+19T>G
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl transcript: ENST00000463478
  gene symbol: HERC4
  hgvsc: ENST00000463478.1:n.273+19T>G
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000378624
  ensembl transcript: ENST00000395198
  gene symbol: HERC4
  hgvsc: ENST00000395198.3:c.463+19T>G
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000378614
  ensembl transcript: ENST00000395187
  gene symbol: HERC4
  hgvsc: ENST00000395187.2:c.303+19T>G
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000362804
  ensembl transcript: ENST00000373700
  gene symbol: HERC4
  hgvsc: ENST00000373700.4:c.463+19T>G
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000277817
  ensembl transcript: ENST00000277817
  gene symbol: HERC4
  hgvsc: ENST00000277817.6:c.133+19T>G
  variant of: http://identifiers.org/hgnc/24521
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29961
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1077
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1874
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15277
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1297
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1713
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5460
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1999
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1759
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum

10-69797838-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69797838
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 69797838
    reference: chr 10
allele count: 8
allele frequency: 6.747069241798093e-5
allele num: 118570
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000378624
  ensembl transcript: ENST00000395198
  gene symbol: HERC4
  hgvsc: ENST00000395198.3:c.463+12T>A
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl transcript: ENST00000463478
  gene symbol: HERC4
  hgvsc: ENST00000463478.1:n.273+12T>A
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000423671
  ensembl transcript: ENST00000473533
  gene symbol: HERC4
  hgvsc: ENST00000473533.2:c.303+12T>A
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000378614
  ensembl transcript: ENST00000395187
  gene symbol: HERC4
  hgvsc: ENST00000395187.2:c.303+12T>A
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000406171
  ensembl transcript: ENST00000427635
  gene symbol: HERC4
  hgvsc: ENST00000427635.2:c.452+12T>A
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000416504
  ensembl transcript: ENST00000412272
  gene symbol: HERC4
  hgvsc: ENST00000412272.2:c.463+12T>A
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000277817
  ensembl transcript: ENST00000277817
  gene symbol: HERC4
  hgvsc: ENST00000277817.6:c.133+12T>A
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000427191
  ensembl transcript: ENST00000513996
  gene symbol: HERC4
  hgvsc: ENST00000513996.1:c.535+12T>A
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000362804
  ensembl transcript: ENST00000373700
  gene symbol: HERC4
  hgvsc: ENST00000373700.4:c.463+12T>A
  variant of: http://identifiers.org/hgnc/24521
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 665
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15608
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31016
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1234
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1875
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1076
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5470
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2018
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1491
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1260
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum

10-69797839-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69797839
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 69797839
    reference: chr 10
allele count: 8
allele frequency: 6.74013412866916e-5
allele num: 118692
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000423671
  ensembl transcript: ENST00000473533
  gene symbol: HERC4
  hgvsc: ENST00000473533.2:c.303+11G>C
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl transcript: ENST00000463478
  gene symbol: HERC4
  hgvsc: ENST00000463478.1:n.273+11G>C
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000427191
  ensembl transcript: ENST00000513996
  gene symbol: HERC4
  hgvsc: ENST00000513996.1:c.535+11G>C
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000406171
  ensembl transcript: ENST00000427635
  gene symbol: HERC4
  hgvsc: ENST00000427635.2:c.452+11G>C
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000378624
  ensembl transcript: ENST00000395198
  gene symbol: HERC4
  hgvsc: ENST00000395198.3:c.463+11G>C
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000378614
  ensembl transcript: ENST00000395187
  gene symbol: HERC4
  hgvsc: ENST00000395187.2:c.303+11G>C
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000416504
  ensembl transcript: ENST00000412272
  gene symbol: HERC4
  hgvsc: ENST00000412272.2:c.463+11G>C
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000277817
  ensembl transcript: ENST00000277817
  gene symbol: HERC4
  hgvsc: ENST00000277817.6:c.133+11G>C
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000362804
  ensembl transcript: ENST00000373700
  gene symbol: HERC4
  hgvsc: ENST00000373700.4:c.463+11G>C
  variant of: http://identifiers.org/hgnc/24521
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5485
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1176
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1077
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1876
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31103
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 15666
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ

10-69797843-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69797843
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 69797843
    reference: chr 10
allele count: 1
allele frequency: 8.39898540256337e-6
allele num: 119062
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000427191
  ensembl transcript: ENST00000513996
  gene symbol: HERC4
  hgvsc: ENST00000513996.1:c.535+7A>G
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000277817
  ensembl transcript: ENST00000277817
  gene symbol: HERC4
  hgvsc: ENST00000277817.6:c.133+7A>G
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000416504
  ensembl transcript: ENST00000412272
  gene symbol: HERC4
  hgvsc: ENST00000412272.2:c.463+7A>G
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl transcript: ENST00000463478
  gene symbol: HERC4
  hgvsc: ENST00000463478.1:n.273+7A>G
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000378624
  ensembl transcript: ENST00000395198
  gene symbol: HERC4
  hgvsc: ENST00000395198.3:c.463+7A>G
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000378614
  ensembl transcript: ENST00000395187
  gene symbol: HERC4
  hgvsc: ENST00000395187.2:c.303+7A>G
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000423671
  ensembl transcript: ENST00000473533
  gene symbol: HERC4
  hgvsc: ENST00000473533.2:c.303+7A>G
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000362804
  ensembl transcript: ENST00000373700
  gene symbol: HERC4
  hgvsc: ENST00000373700.4:c.463+7A>G
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000406171
  ensembl transcript: ENST00000427635
  gene symbol: HERC4
  hgvsc: ENST00000427635.2:c.452+7A>G
  variant of: http://identifiers.org/hgnc/24521
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1875
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 665
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31369
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5517
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1026
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15772
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 777
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2302
  bin: 7.75e1
  variant carriers: 0
hgvs: c.463+7A>G
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum

10-69797851-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69797851
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 69797851
    reference: chr 10
allele count: 3
allele frequency: 2.510502267820382e-5
allele num: 119498
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000378624
  ensembl transcript: ENST00000395198
  gene symbol: HERC4
  hgvsc: ENST00000395198.3:c.462A>G
  hgvsp: ENST00000395198.3:c.462A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000148634
  ensembl transcript: ENST00000463478
  gene symbol: HERC4
  hgvsc: ENST00000463478.1:n.272A>G
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000427191
  ensembl transcript: ENST00000513996
  gene symbol: HERC4
  hgvsc: ENST00000513996.1:c.534A>G
  hgvsp: ENST00000513996.1:c.534A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000416504
  ensembl transcript: ENST00000412272
  gene symbol: HERC4
  hgvsc: ENST00000412272.2:c.462A>G
  hgvsp: ENST00000412272.2:c.462A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000406171
  ensembl transcript: ENST00000427635
  gene symbol: HERC4
  hgvsc: ENST00000427635.2:c.451A>G
  hgvsp: ENST00000427635.2:c.451A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000423671
  ensembl transcript: ENST00000473533
  gene symbol: HERC4
  hgvsc: ENST00000473533.2:c.302A>G
  hgvsp: ENSP00000423671.1:p.Lys101Arg
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000277817
  ensembl transcript: ENST00000277817
  gene symbol: HERC4
  hgvsc: ENST00000277817.6:c.132A>G
  hgvsp: ENST00000277817.6:c.132A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000362804
  ensembl transcript: ENST00000373700
  gene symbol: HERC4
  hgvsc: ENST00000373700.4:c.462A>G
  hgvsp: ENST00000373700.4:c.462A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000378614
  ensembl transcript: ENST00000395187
  gene symbol: HERC4
  hgvsc: ENST00000395187.2:c.302A>G
  hgvsp: ENSP00000378614.2:p.Lys101Arg
  variant of: http://identifiers.org/hgnc/24521
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15935
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1876
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 848
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31608
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5545
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40636
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Lys101Arg
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
reference allele: T
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: FS

10-69797873-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69797873
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 69797873
    reference: chr 10
allele count: 20
allele frequency: 1.669170422300117e-4
allele num: 119820
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000378624
  ensembl transcript: ENST00000395198
  gene symbol: HERC4
  hgvsc: ENST00000395198.3:c.440A>G
  hgvsp: ENSP00000378624.3:p.Tyr147Cys
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000406171
  ensembl transcript: ENST00000427635
  gene symbol: HERC4
  hgvsc: ENST00000427635.2:c.429A>G
  hgvsp: ENSP00000406171.2:p.Tyr144Cys
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000277817
  ensembl transcript: ENST00000277817
  gene symbol: HERC4
  hgvsc: ENST00000277817.6:c.110A>G
  hgvsp: ENSP00000277817.6:p.Tyr37Cys
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000416504
  ensembl transcript: ENST00000412272
  gene symbol: HERC4
  hgvsc: ENST00000412272.2:c.440A>G
  hgvsp: ENSP00000416504.2:p.Tyr147Cys
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148634
  ensembl transcript: ENST00000463478
  gene symbol: HERC4
  hgvsc: ENST00000463478.1:n.250A>G
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000423671
  ensembl transcript: ENST00000473533
  gene symbol: HERC4
  hgvsc: ENST00000473533.2:c.280A>G
  hgvsp: ENSP00000423671.1:p.Ile94Val
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000378614
  ensembl transcript: ENST00000395187
  gene symbol: HERC4
  hgvsc: ENST00000395187.2:c.280A>G
  hgvsp: ENSP00000378614.2:p.Ile94Val
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000427191
  ensembl transcript: ENST00000513996
  gene symbol: HERC4
  hgvsc: ENST00000513996.1:c.512A>G
  hgvsp: ENSP00000427191.1:p.Tyr171Cys
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000362804
  ensembl transcript: ENST00000373700
  gene symbol: HERC4
  hgvsc: ENST00000373700.4:c.440A>G
  hgvsp: ENSP00000362804.4:p.Tyr147Cys
  variant of: http://identifiers.org/hgnc/24521
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31617
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16097
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1877
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 727
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5545
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Tyr147Cys
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP

10-69797893-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69797893
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 69797893
    reference: chr 10
allele count: 1
allele frequency: 8.349893956346754e-6
allele num: 119762
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000378624
  ensembl transcript: ENST00000395198
  gene symbol: HERC4
  hgvsc: ENST00000395198.3:c.420A>G
  hgvsp: ENST00000395198.3:c.420A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000427191
  ensembl transcript: ENST00000513996
  gene symbol: HERC4
  hgvsc: ENST00000513996.1:c.492A>G
  hgvsp: ENST00000513996.1:c.492A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000416504
  ensembl transcript: ENST00000412272
  gene symbol: HERC4
  hgvsc: ENST00000412272.2:c.420A>G
  hgvsp: ENST00000412272.2:c.420A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000423671
  ensembl transcript: ENST00000473533
  gene symbol: HERC4
  hgvsc: ENST00000473533.2:c.260A>G
  hgvsp: ENSP00000423671.1:p.Tyr87Cys
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000277817
  ensembl transcript: ENST00000277817
  gene symbol: HERC4
  hgvsc: ENST00000277817.6:c.90A>G
  hgvsp: ENST00000277817.6:c.90A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000378614
  ensembl transcript: ENST00000395187
  gene symbol: HERC4
  hgvsc: ENST00000395187.2:c.260A>G
  hgvsp: ENSP00000378614.2:p.Tyr87Cys
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000406171
  ensembl transcript: ENST00000427635
  gene symbol: HERC4
  hgvsc: ENST00000427635.2:c.409A>G
  hgvsp: ENST00000427635.2:c.409A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000362804
  ensembl transcript: ENST00000373700
  gene symbol: HERC4
  hgvsc: ENST00000373700.4:c.420A>G
  hgvsp: ENST00000373700.4:c.420A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148634
  ensembl transcript: ENST00000463478
  gene symbol: HERC4
  hgvsc: ENST00000463478.1:n.230A>G
  variant of: http://identifiers.org/hgnc/24521
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 31427
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5537
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 664
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16153
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1872
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 920
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Tyr87Cys
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: T
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff

10-69797894-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69797894
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 69797894
    reference: chr 10
allele count: 1
allele frequency: 8.351009637065121e-6
allele num: 119746
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000378624
  ensembl transcript: ENST00000395198
  gene symbol: HERC4
  hgvsc: ENST00000395198.3:c.419T>C
  hgvsp: ENSP00000378624.3:p.Val140Ala
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000362804
  ensembl transcript: ENST00000373700
  gene symbol: HERC4
  hgvsc: ENST00000373700.4:c.419T>C
  hgvsp: ENSP00000362804.4:p.Val140Ala
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000406171
  ensembl transcript: ENST00000427635
  gene symbol: HERC4
  hgvsc: ENST00000427635.2:c.408T>C
  hgvsp: ENSP00000406171.2:p.Val137Ala
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000416504
  ensembl transcript: ENST00000412272
  gene symbol: HERC4
  hgvsc: ENST00000412272.2:c.419T>C
  hgvsp: ENSP00000416504.2:p.Val140Ala
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000427191
  ensembl transcript: ENST00000513996
  gene symbol: HERC4
  hgvsc: ENST00000513996.1:c.491T>C
  hgvsp: ENSP00000427191.1:p.Val164Ala
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000277817
  ensembl transcript: ENST00000277817
  gene symbol: HERC4
  hgvsc: ENST00000277817.6:c.89T>C
  hgvsp: ENSP00000277817.6:p.Val30Ala
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000423671
  ensembl transcript: ENST00000473533
  gene symbol: HERC4
  hgvsc: ENST00000473533.2:c.259T>C
  hgvsp: ENSP00000423671.1:p.Tyr87His
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148634
  ensembl transcript: ENST00000463478
  gene symbol: HERC4
  hgvsc: ENST00000463478.1:n.229T>C
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000378614
  ensembl transcript: ENST00000395187
  gene symbol: HERC4
  hgvsc: ENST00000395187.2:c.259T>C
  hgvsp: ENSP00000378614.2:p.Tyr87His
  variant of: http://identifiers.org/hgnc/24521
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5531
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31417
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 664
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1873
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16146
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2288
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Val140Ala
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ

10-69797895-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69797895
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 69797895
    reference: chr 10
allele count: 1
allele frequency: 8.353381448810478e-6
allele num: 119712
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000406171
  ensembl transcript: ENST00000427635
  gene symbol: HERC4
  hgvsc: ENST00000427635.2:c.407G>A
  hgvsp: ENSP00000406171.2:p.Val137Ile
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148634
  ensembl transcript: ENST00000463478
  gene symbol: HERC4
  hgvsc: ENST00000463478.1:n.228G>A
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000427191
  ensembl transcript: ENST00000513996
  gene symbol: HERC4
  hgvsc: ENST00000513996.1:c.490G>A
  hgvsp: ENSP00000427191.1:p.Val164Ile
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000378624
  ensembl transcript: ENST00000395198
  gene symbol: HERC4
  hgvsc: ENST00000395198.3:c.418G>A
  hgvsp: ENSP00000378624.3:p.Val140Ile
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000423671
  ensembl transcript: ENST00000473533
  gene symbol: HERC4
  hgvsc: ENST00000473533.2:c.258G>A
  hgvsp: ENST00000473533.2:c.258G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000416504
  ensembl transcript: ENST00000412272
  gene symbol: HERC4
  hgvsc: ENST00000412272.2:c.418G>A
  hgvsp: ENSP00000416504.2:p.Val140Ile
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000378614
  ensembl transcript: ENST00000395187
  gene symbol: HERC4
  hgvsc: ENST00000395187.2:c.258G>A
  hgvsp: ENST00000395187.2:c.258G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000362804
  ensembl transcript: ENST00000373700
  gene symbol: HERC4
  hgvsc: ENST00000373700.4:c.418G>A
  hgvsp: ENSP00000362804.4:p.Val140Ile
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000277817
  ensembl transcript: ENST00000277817
  gene symbol: HERC4
  hgvsc: ENST00000277817.6:c.88G>A
  hgvsp: ENSP00000277817.6:p.Val30Ile
  variant of: http://identifiers.org/hgnc/24521
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1877
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16134
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 664
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5530
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31385
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2278
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 961
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Val140Ile
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: DP

10-69797896-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69797896
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 69797896
    reference: chr 10
allele count: 1
allele frequency: 8.353381448810478e-6
allele num: 119712
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000378614
  ensembl transcript: ENST00000395187
  gene symbol: HERC4
  hgvsc: ENST00000395187.2:c.257T>C
  hgvsp: ENSP00000378614.2:p.Leu86Ser
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000427191
  ensembl transcript: ENST00000513996
  gene symbol: HERC4
  hgvsc: ENST00000513996.1:c.489T>C
  hgvsp: ENST00000513996.1:c.489T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000416504
  ensembl transcript: ENST00000412272
  gene symbol: HERC4
  hgvsc: ENST00000412272.2:c.417T>C
  hgvsp: ENST00000412272.2:c.417T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000423671
  ensembl transcript: ENST00000473533
  gene symbol: HERC4
  hgvsc: ENST00000473533.2:c.257T>C
  hgvsp: ENSP00000423671.1:p.Leu86Ser
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000277817
  ensembl transcript: ENST00000277817
  gene symbol: HERC4
  hgvsc: ENST00000277817.6:c.87T>C
  hgvsp: ENST00000277817.6:c.87T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000362804
  ensembl transcript: ENST00000373700
  gene symbol: HERC4
  hgvsc: ENST00000373700.4:c.417T>C
  hgvsp: ENST00000373700.4:c.417T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000378624
  ensembl transcript: ENST00000395198
  gene symbol: HERC4
  hgvsc: ENST00000395198.3:c.417T>C
  hgvsp: ENST00000395198.3:c.417T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148634
  ensembl transcript: ENST00000463478
  gene symbol: HERC4
  hgvsc: ENST00000463478.1:n.227T>C
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000406171
  ensembl transcript: ENST00000427635
  gene symbol: HERC4
  hgvsc: ENST00000427635.2:c.406T>C
  hgvsp: ENST00000427635.2:c.406T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24521
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5525
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31373
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1871
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16122
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 665
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Leu86Ser
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum

10-69797911-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69797911
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 69797911
    reference: chr 10
allele count: 1
allele frequency: 8.386306838194597e-6
allele num: 119242
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000416504
  ensembl transcript: ENST00000412272
  gene symbol: HERC4
  hgvsc: ENST00000412272.2:c.402G>A
  hgvsp: ENST00000412272.2:c.402G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000277817
  ensembl transcript: ENST00000277817
  gene symbol: HERC4
  hgvsc: ENST00000277817.6:c.72G>A
  hgvsp: ENST00000277817.6:c.72G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000427191
  ensembl transcript: ENST00000513996
  gene symbol: HERC4
  hgvsc: ENST00000513996.1:c.474G>A
  hgvsp: ENST00000513996.1:c.474G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000423671
  ensembl transcript: ENST00000473533
  gene symbol: HERC4
  hgvsc: ENST00000473533.2:c.242G>A
  hgvsp: ENSP00000423671.1:p.Cys81Tyr
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148634
  ensembl transcript: ENST00000463478
  gene symbol: HERC4
  hgvsc: ENST00000463478.1:n.212G>A
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000406171
  ensembl transcript: ENST00000427635
  gene symbol: HERC4
  hgvsc: ENST00000427635.2:c.391G>A
  hgvsp: ENST00000427635.2:c.391G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000378614
  ensembl transcript: ENST00000395187
  gene symbol: HERC4
  hgvsc: ENST00000395187.2:c.242G>A
  hgvsp: ENSP00000378614.2:p.Cys81Tyr
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000362804
  ensembl transcript: ENST00000373700
  gene symbol: HERC4
  hgvsc: ENST00000373700.4:c.402G>A
  hgvsp: ENST00000373700.4:c.402G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000378624
  ensembl transcript: ENST00000395198
  gene symbol: HERC4
  hgvsc: ENST00000395198.3:c.402G>A
  hgvsp: ENST00000395198.3:c.402G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24521
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30908
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1001
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 664
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1866
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15876
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5441
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1509
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6580
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Cys81Tyr
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: DP

10-69797918-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69797918
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 69797918
    reference: chr 10
allele count: 1
allele frequency: 8.427723840345199e-6
allele num: 118656
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000277817
  ensembl transcript: ENST00000277817
  gene symbol: HERC4
  hgvsc: ENST00000277817.6:c.65A>G
  hgvsp: ENSP00000277817.6:p.Lys22Arg
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000362804
  ensembl transcript: ENST00000373700
  gene symbol: HERC4
  hgvsc: ENST00000373700.4:c.395A>G
  hgvsp: ENSP00000362804.4:p.Lys132Arg
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148634
  ensembl transcript: ENST00000463478
  gene symbol: HERC4
  hgvsc: ENST00000463478.1:n.205A>G
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000406171
  ensembl transcript: ENST00000427635
  gene symbol: HERC4
  hgvsc: ENST00000427635.2:c.384A>G
  hgvsp: ENSP00000406171.2:p.Lys129Arg
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000378624
  ensembl transcript: ENST00000395198
  gene symbol: HERC4
  hgvsc: ENST00000395198.3:c.395A>G
  hgvsp: ENSP00000378624.3:p.Lys132Arg
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000423671
  ensembl transcript: ENST00000473533
  gene symbol: HERC4
  hgvsc: ENST00000473533.2:c.235A>G
  hgvsp: ENSP00000423671.1:p.Lys79Glu
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000427191
  ensembl transcript: ENST00000513996
  gene symbol: HERC4
  hgvsc: ENST00000513996.1:c.467A>G
  hgvsp: ENSP00000427191.1:p.Lys156Arg
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000416504
  ensembl transcript: ENST00000412272
  gene symbol: HERC4
  hgvsc: ENST00000412272.2:c.395A>G
  hgvsp: ENSP00000416504.2:p.Lys132Arg
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000378614
  ensembl transcript: ENST00000395187
  gene symbol: HERC4
  hgvsc: ENST00000395187.2:c.235A>G
  hgvsp: ENSP00000378614.2:p.Lys79Glu
  variant of: http://identifiers.org/hgnc/24521
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1852
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1066
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30246
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1256
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1509
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5344
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15446
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 663
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2149
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Lys132Arg
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: African
reference allele: T
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: DP

10-69797923-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69797923
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 69797923
    reference: chr 10
allele count: 1
allele frequency: 8.461811843151855e-6
allele num: 118178
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000423671
  ensembl transcript: ENST00000473533
  gene symbol: HERC4
  hgvsc: ENST00000473533.2:c.230T>C
  hgvsp: ENSP00000423671.1:p.Ile77Thr
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000427191
  ensembl transcript: ENST00000513996
  gene symbol: HERC4
  hgvsc: ENST00000513996.1:c.462T>C
  hgvsp: ENST00000513996.1:c.462T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000378614
  ensembl transcript: ENST00000395187
  gene symbol: HERC4
  hgvsc: ENST00000395187.2:c.230T>C
  hgvsp: ENSP00000378614.2:p.Ile77Thr
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000277817
  ensembl transcript: ENST00000277817
  gene symbol: HERC4
  hgvsc: ENST00000277817.6:c.60T>C
  hgvsp: ENST00000277817.6:c.60T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000378624
  ensembl transcript: ENST00000395198
  gene symbol: HERC4
  hgvsc: ENST00000395198.3:c.390T>C
  hgvsp: ENST00000395198.3:c.390T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000416504
  ensembl transcript: ENST00000412272
  gene symbol: HERC4
  hgvsc: ENST00000412272.2:c.390T>C
  hgvsp: ENST00000412272.2:c.390T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000406171
  ensembl transcript: ENST00000427635
  gene symbol: HERC4
  hgvsc: ENST00000427635.2:c.379T>C
  hgvsp: ENST00000427635.2:c.379T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148634
  ensembl transcript: ENST00000463478
  gene symbol: HERC4
  hgvsc: ENST00000463478.1:n.200T>C
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000362804
  ensembl transcript: ENST00000373700
  gene symbol: HERC4
  hgvsc: ENST00000373700.4:c.390T>C
  hgvsp: ENST00000373700.4:c.390T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/24521
canonical: false
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 5196
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1472
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 597
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29720
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2149
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 663
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1064
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15066
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1850
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 277
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1462
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ile77Thr
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
reference allele: A
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ

10-69797932-AAAG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69797932
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 69797929
    reference: chr 10
allele count: 1
allele frequency: 8.526893823118114e-6
allele num: 117276
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000416504
  ensembl transcript: ENST00000412272
  gene symbol: HERC4
  hgvsc: ENST00000412272.2:c.387-9_387-7delCTT
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000427191
  ensembl transcript: ENST00000513996
  gene symbol: HERC4
  hgvsc: ENST00000513996.1:c.459-9_459-7delCTT
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148634
  ensembl transcript: ENST00000463478
  gene symbol: HERC4
  hgvsc: ENST00000463478.1:n.188_190delCTT
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000378614
  ensembl transcript: ENST00000395187
  gene symbol: HERC4
  hgvsc: ENST00000395187.2:c.227-9_227-7delCTT
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000362804
  ensembl transcript: ENST00000373700
  gene symbol: HERC4
  hgvsc: ENST00000373700.4:c.387-9_387-7delCTT
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000423671
  ensembl transcript: ENST00000473533
  gene symbol: HERC4
  hgvsc: ENST00000473533.2:c.227-9_227-7delCTT
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000406171
  ensembl transcript: ENST00000427635
  gene symbol: HERC4
  hgvsc: ENST00000427635.2:c.376-9_376-7delCTT
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000378624
  ensembl transcript: ENST00000395198
  gene symbol: HERC4
  hgvsc: ENST00000395198.3:c.387-9_387-7delCTT
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000277817
  ensembl transcript: ENST00000277817
  gene symbol: HERC4
  hgvsc: ENST00000277817.6:c.57-9_57-7delCTT
  variant of: http://identifiers.org/hgnc/24521
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 665
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14430
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1089
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1836
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3531
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28334
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1817
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4941
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1915
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 7.5e0
  variant carriers: 0
hgvs: c.387-9_387-7delCTT
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: AAAG
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ

http://identifiers.org/exac.variant/10-69797948-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69797948
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 69797948
    reference: chr 10
allele count: 1
allele frequency: 8.629616845012081e-6
allele num: 115880
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000416504
  ensembl transcript: ENST00000412272
  gene symbol: HERC4
  hgvsc: ENST00000412272.2:c.387-22G>T
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000427191
  ensembl transcript: ENST00000513996
  gene symbol: HERC4
  hgvsc: ENST00000513996.1:c.459-22G>T
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000406171
  ensembl transcript: ENST00000427635
  gene symbol: HERC4
  hgvsc: ENST00000427635.2:c.376-22G>T
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000378624
  ensembl transcript: ENST00000395198
  gene symbol: HERC4
  hgvsc: ENST00000395198.3:c.387-22G>T
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000362804
  ensembl transcript: ENST00000373700
  gene symbol: HERC4
  hgvsc: ENST00000373700.4:c.387-22G>T
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000423671
  ensembl transcript: ENST00000473533
  gene symbol: HERC4
  hgvsc: ENST00000473533.2:c.227-22G>T
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000277817
  ensembl transcript: ENST00000277817
  gene symbol: HERC4
  hgvsc: ENST00000277817.6:c.57-22G>T
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148634
  ensembl transcript: ENST00000463478
  gene symbol: HERC4
  hgvsc: ENST00000463478.1:n.175G>T
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000378614
  ensembl transcript: ENST00000395187
  gene symbol: HERC4
  hgvsc: ENST00000395187.2:c.227-22G>T
  variant of: http://identifiers.org/hgnc/24521
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 665
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23885
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13455
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4719
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2280
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1064
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3121
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6545
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1838
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5390
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2324
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 530
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 236
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: MQ

http://identifiers.org/exac.variant/10-69797963-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69797963
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 69797963
    reference: chr 10
allele count: 1
allele frequency: 8.753041681984489e-6
allele num: 114246
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000427191
  ensembl transcript: ENST00000513996
  gene symbol: HERC4
  hgvsc: ENST00000513996.1:c.459-37G>T
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000423671
  ensembl transcript: ENST00000473533
  gene symbol: HERC4
  hgvsc: ENST00000473533.2:c.227-37G>T
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000378624
  ensembl transcript: ENST00000395198
  gene symbol: HERC4
  hgvsc: ENST00000395198.3:c.387-37G>T
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000406171
  ensembl transcript: ENST00000427635
  gene symbol: HERC4
  hgvsc: ENST00000427635.2:c.376-37G>T
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000416504
  ensembl transcript: ENST00000412272
  gene symbol: HERC4
  hgvsc: ENST00000412272.2:c.387-37G>T
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148634
  ensembl transcript: ENST00000463478
  gene symbol: HERC4
  hgvsc: ENST00000463478.1:n.160G>T
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000277817
  ensembl transcript: ENST00000277817
  gene symbol: HERC4
  hgvsc: ENST00000277817.6:c.57-37G>T
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000362804
  ensembl transcript: ENST00000373700
  gene symbol: HERC4
  hgvsc: ENST00000373700.4:c.387-37G>T
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000378614
  ensembl transcript: ENST00000395187
  gene symbol: HERC4
  hgvsc: ENST00000395187.2:c.227-37G>T
  variant of: http://identifiers.org/hgnc/24521
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8977
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2821
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1060
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11815
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1823
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4439
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8108
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17700
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 587
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1713
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 371
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 599
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 381
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS

10-69797966-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69797966
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 69797966
    reference: chr 10
allele count: 28
allele frequency: 2.455838756643921e-4
allele num: 114014
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148634
  ensembl transcript: ENST00000463478
  gene symbol: HERC4
  hgvsc: ENST00000463478.1:n.157A>G
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000423671
  ensembl transcript: ENST00000473533
  gene symbol: HERC4
  hgvsc: ENST00000473533.2:c.227-40A>G
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000378624
  ensembl transcript: ENST00000395198
  gene symbol: HERC4
  hgvsc: ENST00000395198.3:c.387-40A>G
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000378614
  ensembl transcript: ENST00000395187
  gene symbol: HERC4
  hgvsc: ENST00000395187.2:c.227-40A>G
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000406171
  ensembl transcript: ENST00000427635
  gene symbol: HERC4
  hgvsc: ENST00000427635.2:c.376-40A>G
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000416504
  ensembl transcript: ENST00000412272
  gene symbol: HERC4
  hgvsc: ENST00000412272.2:c.387-40A>G
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000277817
  ensembl transcript: ENST00000277817
  gene symbol: HERC4
  hgvsc: ENST00000277817.6:c.57-40A>G
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000427191
  ensembl transcript: ENST00000513996
  gene symbol: HERC4
  hgvsc: ENST00000513996.1:c.459-40A>G
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000362804
  ensembl transcript: ENST00000373700
  gene symbol: HERC4
  hgvsc: ENST00000373700.4:c.387-40A>G
  variant of: http://identifiers.org/hgnc/24521
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11051
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3026
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8052
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1818
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16427
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4290
  bin: 3.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 10990
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 664
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1067
  bin: 4.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 4826
  bin: 9.75e1
  variant carriers: 28
genotype quality: GenotypeQuality
  all individuals: 424
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 660
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2531
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 636
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD

10-69797974-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69797974
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 69797974
    reference: chr 10
allele count: 1
allele frequency: 8.865405414989627e-6
allele num: 112798
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000427191
  ensembl transcript: ENST00000513996
  gene symbol: HERC4
  hgvsc: ENST00000513996.1:c.459-48T>C
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000378624
  ensembl transcript: ENST00000395198
  gene symbol: HERC4
  hgvsc: ENST00000395198.3:c.387-48T>C
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000423671
  ensembl transcript: ENST00000473533
  gene symbol: HERC4
  hgvsc: ENST00000473533.2:c.227-48T>C
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000416504
  ensembl transcript: ENST00000412272
  gene symbol: HERC4
  hgvsc: ENST00000412272.2:c.387-48T>C
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000277817
  ensembl transcript: ENST00000277817
  gene symbol: HERC4
  hgvsc: ENST00000277817.6:c.57-48T>C
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000378614
  ensembl transcript: ENST00000395187
  gene symbol: HERC4
  hgvsc: ENST00000395187.2:c.227-48T>C
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148634
  ensembl transcript: ENST00000463478
  gene symbol: HERC4
  hgvsc: ENST00000463478.1:n.149T>C
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000406171
  ensembl transcript: ENST00000427635
  gene symbol: HERC4
  hgvsc: ENST00000427635.2:c.376-48T>C
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000362804
  ensembl transcript: ENST00000373700
  gene symbol: HERC4
  hgvsc: ENST00000373700.4:c.387-48T>C
  variant of: http://identifiers.org/hgnc/24521
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1060
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1825
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17518
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11152
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7741
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4060
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9852
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3499
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 687
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4802
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1674
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 619
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1187
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: A
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum

10-69797975-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69797975
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 69797975
    reference: chr 10
allele count: 27
allele frequency: 2.39268370493779e-4
allele num: 112844
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000423671
  ensembl transcript: ENST00000473533
  gene symbol: HERC4
  hgvsc: ENST00000473533.2:c.227-49A>G
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000277817
  ensembl transcript: ENST00000277817
  gene symbol: HERC4
  hgvsc: ENST00000277817.6:c.57-49A>G
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000378624
  ensembl transcript: ENST00000395198
  gene symbol: HERC4
  hgvsc: ENST00000395198.3:c.387-49A>G
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000362804
  ensembl transcript: ENST00000373700
  gene symbol: HERC4
  hgvsc: ENST00000373700.4:c.387-49A>G
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000378614
  ensembl transcript: ENST00000395187
  gene symbol: HERC4
  hgvsc: ENST00000395187.2:c.227-49A>G
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000427191
  ensembl transcript: ENST00000513996
  gene symbol: HERC4
  hgvsc: ENST00000513996.1:c.459-49A>G
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000406171
  ensembl transcript: ENST00000427635
  gene symbol: HERC4
  hgvsc: ENST00000427635.2:c.376-49A>G
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148634
  ensembl transcript: ENST00000463478
  gene symbol: HERC4
  hgvsc: ENST00000463478.1:n.148A>G
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000416504
  ensembl transcript: ENST00000412272
  gene symbol: HERC4
  hgvsc: ENST00000412272.2:c.387-49A>G
  variant of: http://identifiers.org/hgnc/24521
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3508
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11142
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 7742
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9886
  bin: 2.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1827
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17486
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1059
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4056
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2697
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2576
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 684
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 770
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: DP

10-69799129-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69799129
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 69799129
    reference: chr 10
allele count: 2
allele frequency: 1.098901098901099e-4
allele num: 18200
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000416504
  ensembl transcript: ENST00000412272
  gene symbol: HERC4
  hgvsc: ENST00000412272.2:c.387-1203G>A
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000423671
  ensembl transcript: ENST00000473533
  gene symbol: HERC4
  hgvsc: ENST00000473533.2:c.227-1203G>A
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000378624
  ensembl transcript: ENST00000395198
  gene symbol: HERC4
  hgvsc: ENST00000395198.3:c.387-1203G>A
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000362804
  ensembl transcript: ENST00000373700
  gene symbol: HERC4
  hgvsc: ENST00000373700.4:c.387-1203G>A
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000406171
  ensembl transcript: ENST00000427635
  gene symbol: HERC4
  hgvsc: ENST00000427635.2:c.376-1203G>A
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000378614
  ensembl transcript: ENST00000395187
  gene symbol: HERC4
  hgvsc: ENST00000395187.2:c.227-1203G>A
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000277817
  ensembl transcript: ENST00000277817
  gene symbol: HERC4
  hgvsc: ENST00000277817.6:c.56+45G>A
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000427191
  ensembl transcript: ENST00000513996
  gene symbol: HERC4
  hgvsc: ENST00000513996.1:c.458+45G>A
  variant of: http://identifiers.org/hgnc/24521
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 966
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1171
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1399
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1489
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1596
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 557
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 568
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 763
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 658
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS

10-69799194-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69799194
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 69799194
    reference: chr 10
allele count: 1
allele frequency: 5.420054200542005e-5
allele num: 18450
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000277817
  ensembl transcript: ENST00000277817
  gene symbol: HERC4
  hgvsc: ENST00000277817.6:c.36A>G
  hgvsp: ENST00000277817.6:c.36A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000378624
  ensembl transcript: ENST00000395198
  gene symbol: HERC4
  hgvsc: ENST00000395198.3:c.387-1268A>G
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000423671
  ensembl transcript: ENST00000473533
  gene symbol: HERC4
  hgvsc: ENST00000473533.2:c.227-1268A>G
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000362804
  ensembl transcript: ENST00000373700
  gene symbol: HERC4
  hgvsc: ENST00000373700.4:c.387-1268A>G
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000427191
  ensembl transcript: ENST00000513996
  gene symbol: HERC4
  hgvsc: ENST00000513996.1:c.438A>G
  hgvsp: ENST00000513996.1:c.438A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000378614
  ensembl transcript: ENST00000395187
  gene symbol: HERC4
  hgvsc: ENST00000395187.2:c.227-1268A>G
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000406171
  ensembl transcript: ENST00000427635
  gene symbol: HERC4
  hgvsc: ENST00000427635.2:c.376-1268A>G
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000416504
  ensembl transcript: ENST00000412272
  gene symbol: HERC4
  hgvsc: ENST00000412272.2:c.387-1268A>G
  variant of: http://identifiers.org/hgnc/24521
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1551
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1308
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1724
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 981
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1631
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2252
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 987
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 574
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Gly146Gly
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
reference allele: T
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: QD

10-69799197-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69799197
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 69799197
    reference: chr 10
allele count: 2
allele frequency: 1.085069444444444e-4
allele num: 18432
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000378624
  ensembl transcript: ENST00000395198
  gene symbol: HERC4
  hgvsc: ENST00000395198.3:c.387-1271C>T
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000362804
  ensembl transcript: ENST00000373700
  gene symbol: HERC4
  hgvsc: ENST00000373700.4:c.387-1271C>T
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000406171
  ensembl transcript: ENST00000427635
  gene symbol: HERC4
  hgvsc: ENST00000427635.2:c.376-1271C>T
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000378614
  ensembl transcript: ENST00000395187
  gene symbol: HERC4
  hgvsc: ENST00000395187.2:c.227-1271C>T
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000416504
  ensembl transcript: ENST00000412272
  gene symbol: HERC4
  hgvsc: ENST00000412272.2:c.387-1271C>T
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000427191
  ensembl transcript: ENST00000513996
  gene symbol: HERC4
  hgvsc: ENST00000513996.1:c.435C>T
  hgvsp: ENST00000513996.1:c.435C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000277817
  ensembl transcript: ENST00000277817
  gene symbol: HERC4
  hgvsc: ENST00000277817.6:c.33C>T
  hgvsp: ENST00000277817.6:c.33C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000423671
  ensembl transcript: ENST00000473533
  gene symbol: HERC4
  hgvsc: ENST00000473533.2:c.227-1271C>T
  variant of: http://identifiers.org/hgnc/24521
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 982
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1725
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1319
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1552
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1228
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1614
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 985
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 571
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 432
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Ser145Ser
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQ

10-69799236-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69799236
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 69799236
    reference: chr 10
allele count: 36
allele frequency: 2.010274737547465e-3
allele num: 17908
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000427191
  ensembl transcript: ENST00000513996
  gene symbol: HERC4
  hgvsc: ENST00000513996.1:c.396G>A
  hgvsp: ENST00000513996.1:c.396G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000406171
  ensembl transcript: ENST00000427635
  gene symbol: HERC4
  hgvsc: ENST00000427635.2:c.376-1310G>A
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000277817
  ensembl transcript: ENST00000277817
  gene symbol: HERC4
  hgvsc: ENST00000277817.6:c.-7G>A
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000378614
  ensembl transcript: ENST00000395187
  gene symbol: HERC4
  hgvsc: ENST00000395187.2:c.227-1310G>A
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000362804
  ensembl transcript: ENST00000373700
  gene symbol: HERC4
  hgvsc: ENST00000373700.4:c.387-1310G>A
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000378624
  ensembl transcript: ENST00000395198
  gene symbol: HERC4
  hgvsc: ENST00000395198.3:c.387-1310G>A
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000423671
  ensembl transcript: ENST00000473533
  gene symbol: HERC4
  hgvsc: ENST00000473533.2:c.227-1310G>A
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000416504
  ensembl transcript: ENST00000412272
  gene symbol: HERC4
  hgvsc: ENST00000412272.2:c.387-1310G>A
  variant of: http://identifiers.org/hgnc/24521
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1148
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1225
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1528
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1233
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 1.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1631
  bin: 2.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 714
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 3.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1060
  bin: 7.5e0
  variant carriers: 1
hgvs: p.Pro132Pro
num of homozygotes: 1
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: QD

10-69799261-G-GT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69799261
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 69799262
    reference: chr 10
allele count: 2
allele frequency: 1.153801776854736e-4
allele num: 17334
alternate allele: GT
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000277817
  ensembl transcript: ENST00000277817
  gene symbol: HERC4
  hgvsc: ENST00000277817.6:c.-33dupA
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000378624
  ensembl transcript: ENST00000395198
  gene symbol: HERC4
  hgvsc: ENST00000395198.3:c.387-1336dupA
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000378614
  ensembl transcript: ENST00000395187
  gene symbol: HERC4
  hgvsc: ENST00000395187.2:c.227-1336dupA
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000362804
  ensembl transcript: ENST00000373700
  gene symbol: HERC4
  hgvsc: ENST00000373700.4:c.387-1336dupA
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000423671
  ensembl transcript: ENST00000473533
  gene symbol: HERC4
  hgvsc: ENST00000473533.2:c.227-1336dupA
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000406171
  ensembl transcript: ENST00000427635
  gene symbol: HERC4
  hgvsc: ENST00000427635.2:c.376-1336dupA
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000416504
  ensembl transcript: ENST00000412272
  gene symbol: HERC4
  hgvsc: ENST00000412272.2:c.387-1336dupA
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000427191
  ensembl transcript: ENST00000513996
  gene symbol: HERC4
  hgvsc: ENST00000513996.1:c.387-17dupA
  variant of: http://identifiers.org/hgnc/24521
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 831
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1354
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1091
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1219
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1465
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 420
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 539
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1906
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 679
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
reference allele: G
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum

10-69799261-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69799261
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 69799261
    reference: chr 10
allele count: 1
allele frequency: 5.769008884273682e-5
allele num: 17334
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000277817
  ensembl transcript: ENST00000277817
  gene symbol: HERC4
  hgvsc: ENST00000277817.6:c.-32C>A
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000378624
  ensembl transcript: ENST00000395198
  gene symbol: HERC4
  hgvsc: ENST00000395198.3:c.387-1335C>A
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000423671
  ensembl transcript: ENST00000473533
  gene symbol: HERC4
  hgvsc: ENST00000473533.2:c.227-1335C>A
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000362804
  ensembl transcript: ENST00000373700
  gene symbol: HERC4
  hgvsc: ENST00000373700.4:c.387-1335C>A
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000378614
  ensembl transcript: ENST00000395187
  gene symbol: HERC4
  hgvsc: ENST00000395187.2:c.227-1335C>A
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000406171
  ensembl transcript: ENST00000427635
  gene symbol: HERC4
  hgvsc: ENST00000427635.2:c.376-1335C>A
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000427191
  ensembl transcript: ENST00000513996
  gene symbol: HERC4
  hgvsc: ENST00000513996.1:c.387-16C>A
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000416504
  ensembl transcript: ENST00000412272
  gene symbol: HERC4
  hgvsc: ENST00000412272.2:c.387-1335C>A
  variant of: http://identifiers.org/hgnc/24521
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1354
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1465
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 831
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1219
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1091
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 679
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 938
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
population: African
population: Latino
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum

10-69799263-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69799263
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 69799263
    reference: chr 10
allele count: 0
allele frequency: 0.0e0
allele num: 17318
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000378614
  ensembl transcript: ENST00000395187
  gene symbol: HERC4
  hgvsc: ENST00000395187.2:c.227-1337A>G
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000423671
  ensembl transcript: ENST00000473533
  gene symbol: HERC4
  hgvsc: ENST00000473533.2:c.227-1337A>G
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000406171
  ensembl transcript: ENST00000427635
  gene symbol: HERC4
  hgvsc: ENST00000427635.2:c.376-1337A>G
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000277817
  ensembl transcript: ENST00000277817
  gene symbol: HERC4
  hgvsc: ENST00000277817.6:c.-34A>G
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000416504
  ensembl transcript: ENST00000412272
  gene symbol: HERC4
  hgvsc: ENST00000412272.2:c.387-1337A>G
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000427191
  ensembl transcript: ENST00000513996
  gene symbol: HERC4
  hgvsc: ENST00000513996.1:c.387-18A>G
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000362804
  ensembl transcript: ENST00000373700
  gene symbol: HERC4
  hgvsc: ENST00000373700.4:c.387-1337A>G
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000378624
  ensembl transcript: ENST00000395198
  gene symbol: HERC4
  hgvsc: ENST00000395198.3:c.387-1337A>G
  variant of: http://identifiers.org/hgnc/24521
canonical: false
consequence: 5' UTR
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 841
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1217
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1090
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1337
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1457
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 481
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1167
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 845
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 938
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 571
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
population: African
population: South Asian
reference allele: T
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: MQ

10-69799264-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69799264
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 69799264
    reference: chr 10
allele count: 4
allele frequency: 2.31535077564251e-4
allele num: 17276
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000378624
  ensembl transcript: ENST00000395198
  gene symbol: HERC4
  hgvsc: ENST00000395198.3:c.387-1338A>G
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000423671
  ensembl transcript: ENST00000473533
  gene symbol: HERC4
  hgvsc: ENST00000473533.2:c.227-1338A>G
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000378614
  ensembl transcript: ENST00000395187
  gene symbol: HERC4
  hgvsc: ENST00000395187.2:c.227-1338A>G
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000362804
  ensembl transcript: ENST00000373700
  gene symbol: HERC4
  hgvsc: ENST00000373700.4:c.387-1338A>G
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000277817
  ensembl transcript: ENST00000277817
  gene symbol: HERC4
  hgvsc: ENST00000277817.6:c.-35A>G
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000406171
  ensembl transcript: ENST00000427635
  gene symbol: HERC4
  hgvsc: ENST00000427635.2:c.376-1338A>G
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000427191
  ensembl transcript: ENST00000513996
  gene symbol: HERC4
  hgvsc: ENST00000513996.1:c.387-19A>G
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000416504
  ensembl transcript: ENST00000412272
  gene symbol: HERC4
  hgvsc: ENST00000412272.2:c.387-1338A>G
  variant of: http://identifiers.org/hgnc/24521
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 977
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1216
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 860
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1450
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1314
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 790
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1097
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 540
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2245
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 675
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Other
population: African
population: European (Finnish)
population: Latino
population: East Asian
reference allele: T
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum

http://identifiers.org/exac.variant/10-69799285-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69799285
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 69799285
    reference: chr 10
allele count: 2
allele frequency: 1.202935161794779e-4
allele num: 16626
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000362804
  ensembl transcript: ENST00000373700
  gene symbol: HERC4
  hgvsc: ENST00000373700.4:c.387-1359T>G
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000277817
  ensembl transcript: ENST00000277817
  gene symbol: HERC4
  hgvsc: ENST00000277817.6:c.-56T>G
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000378624
  ensembl transcript: ENST00000395198
  gene symbol: HERC4
  hgvsc: ENST00000395198.3:c.387-1359T>G
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000378614
  ensembl transcript: ENST00000395187
  gene symbol: HERC4
  hgvsc: ENST00000395187.2:c.227-1359T>G
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000423671
  ensembl transcript: ENST00000473533
  gene symbol: HERC4
  hgvsc: ENST00000473533.2:c.227-1359T>G
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000416504
  ensembl transcript: ENST00000412272
  gene symbol: HERC4
  hgvsc: ENST00000412272.2:c.387-1359T>G
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000427191
  ensembl transcript: ENST00000513996
  gene symbol: HERC4
  hgvsc: ENST00000513996.1:c.387-40T>G
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000406171
  ensembl transcript: ENST00000427635
  gene symbol: HERC4
  hgvsc: ENST00000427635.2:c.376-1359T>G
  variant of: http://identifiers.org/hgnc/24521
canonical: false
consequence: 5' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1212
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1335
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 977
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 841
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 963
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1212
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 417
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 654
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1174
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 731
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 479
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1070
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
reference allele: A
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum

10-69804110-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 69804110
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 69804110
    reference: chr 10
allele count: 1
allele frequency: 8.686738824510502e-6
allele num: 115118
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000406171
  ensembl transcript: ENST00000427635
  gene symbol: HERC4
  hgvsc: ENST00000427635.2:c.375+51T>A
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000378614
  ensembl transcript: ENST00000395187
  gene symbol: HERC4
  hgvsc: ENST00000395187.2:c.227-6184T>A
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000362804
  ensembl transcript: ENST00000373700
  gene symbol: HERC4
  hgvsc: ENST00000373700.4:c.386+51T>A
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000416504
  ensembl transcript: ENST00000412272
  gene symbol: HERC4
  hgvsc: ENST00000412272.2:c.386+51T>A
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000378624
  ensembl transcript: ENST00000395198
  gene symbol: HERC4
  hgvsc: ENST00000395198.3:c.386+51T>A
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000423671
  ensembl transcript: ENST00000473533
  gene symbol: HERC4
  hgvsc: ENST00000473533.2:c.227-6184T>A
  variant of: http://identifiers.org/hgnc/24521
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148634
  ensembl protein: ENSP00000427191
  ensembl transcript: ENST00000513996
  gene symbol: HERC4
  hgvsc: ENST00000513996.1:c.386+51T>A
  variant of: http://identifiers.org/hgnc/24521
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15553
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10066
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3841
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13938
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2737
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8469
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1784
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 974
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2160
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3963
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1878
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8487
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5137
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 650
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2322
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3041
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6206
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: A
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD

GenotypeQuality
all individuals: 3174
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2065
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 220
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6598
bin: 9.75e1
variant carriers: 10

GenotypeQuality
all individuals: 907
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2557
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 9
allele frequency: 1.351189046360797e-4
allele num: 66608
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.671179883945841e-5
allele num: 10340
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.528e0

VQSLOD
type: SiteQuality
SIO_000300: 3.52e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.42e0

MQRankSum
type: SiteQuality
SIO_000300: 1.76e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.37e-1

QD
type: SiteQuality
SIO_000300: 1.245e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

DP
type: SiteQuality
SIO_000300: 1.950714e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.66e-1

MQ
type: SiteQuality
SIO_000300: 5.962e1

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2058
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2554
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 906
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3168
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6595
bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 19
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10340
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 3.029568589432865e-4
allele num: 16504
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.504910352283989e-5
allele num: 66594
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.27e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.5e0

FS
type: SiteQuality
SIO_000300: 1.429e0

DP
type: SiteQuality
SIO_000300: 1.950646e6

MQRankSum
type: SiteQuality
SIO_000300: 5.44e-1

MQ
type: SiteQuality
SIO_000300: 5.978e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.71e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.673e0

QD
type: SiteQuality
SIO_000300: 1.276e1

GenotypeQuality
all individuals: 297
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9616
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.667013347200555e-5
allele num: 11538
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.502268425322237e-5
allele num: 66566
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 16500
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African
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allele frequency: 0.0e0
allele num: 10326
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.52e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
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VQSLOD
type: SiteQuality
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FS
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MQ
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SIO_000300: 5.959e1

QD
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MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.4e-1

BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10322
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.006162633398467e-5
allele num: 66530
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

BaseQRankSum
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SIO_000300: -3.815e0

VQSLOD
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DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.47e-1

QD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 3.912e0

MQ
type: SiteQuality
SIO_000300: 5.972e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.72e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.08e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11524
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66516
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.695559433779329e-5
allele num: 10314
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.946917e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.15e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.97e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.78e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.92e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.67e0

QD
type: SiteQuality
SIO_000300: 1.462e1

MQRankSum
type: SiteQuality
SIO_000300: 7.8e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 10314
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.103752759381898e-3
allele num: 906
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16498
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11524
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

European (Non-Finnish)
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allele count: 10
allele frequency: 1.503397678753984e-4
allele num: 66516
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

QD
type: SiteQuality
SIO_000300: 1.462e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.78e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.8e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 2.15e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 5.67e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.92e-1

MQ
type: SiteQuality
SIO_000300: 5.97e1

DP
type: SiteQuality
SIO_000300: 1.946917e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10254
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11438
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8516
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.537205081669691e-5
allele num: 66120
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16456
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.57e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.765e0

FS
type: SiteQuality
SIO_000300: 2.332e0

QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -1.567e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.97e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.41e-1

DP
type: SiteQuality
SIO_000300: 1.927517e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6572
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66072
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.75800156128025e-5
allele num: 10248
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.770391159445712e-5
allele num: 11402
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16450
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
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InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.373e0

QD
type: SiteQuality
SIO_000300: 1.232e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.28e-1

DP
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BaseQRankSum
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MQRankSum
type: SiteQuality
SIO_000300: -1.54e-1

MQ
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
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African
type: Population
allele count: 0
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Latino
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allele frequency: 1.779676098949991e-4
allele num: 11238
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6522
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East Asian
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allele frequency: 0.0e0
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South Asian
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 3
allele frequency: 4.583511581005928e-5
allele num: 65452
num of homozygotes: 0

MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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ClippingRankSum
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FS
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DP
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QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.061849357011635e-5
allele num: 65320
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Latino
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Other
type: Population
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East Asian
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South Asian
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African
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6514
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InbreedingCoeff
type: SiteQuality
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DP
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BaseQRankSum
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VQSLOD
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ClippingRankSum
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QD
type: SiteQuality
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ReadPosRankSum
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FS
type: SiteQuality
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MQ
type: SiteQuality
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.540499738115044e-5
allele num: 64914
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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East Asian
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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Other
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South Asian
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FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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MQ
type: SiteQuality
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VQSLOD
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MQRankSum
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BaseQRankSum
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ReadPosRankSum
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QD
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DP
type: SiteQuality
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
all individuals: 1333
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2645
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6288
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62702
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.25328988595062e-4
allele num: 15958
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7822
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9740
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 2.47e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.91e-1

QD
type: SiteQuality
SIO_000300: 1.599e1

DP
type: SiteQuality
SIO_000300: 1.662858e6

MQRankSum
type: SiteQuality
SIO_000300: -1.191e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.45e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.97e-1

MQ
type: SiteQuality
SIO_000300: 5.963e1

GenotypeQuality
all individuals: 513
bin: 4.75e1
variant carriers: 286

GenotypeQuality
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bin: 3.25e1
variant carriers: 142

GenotypeQuality
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variant carriers: 213

GenotypeQuality
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variant carriers: 278

GenotypeQuality
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bin: 1.25e1
variant carriers: 58

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 1.75e1
variant carriers: 83

GenotypeQuality
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bin: 6.75e1
variant carriers: 446

GenotypeQuality
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bin: 8.75e1
variant carriers: 277

GenotypeQuality
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bin: 8.25e1
variant carriers: 426

GenotypeQuality
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variant carriers: 371

GenotypeQuality
all individuals: 652
bin: 5.25e1
variant carriers: 317

East Asian
type: Population
allele count: 2650
allele frequency: 3.417590920815063e-1
allele num: 7754
num of homozygotes: 414

South Asian
type: Population
allele count: 4582
allele frequency: 2.878502324412615e-1
allele num: 15918
num of homozygotes: 663

African
type: Population
allele count: 2816
allele frequency: 2.90608875128999e-1
allele num: 9690
num of homozygotes: 392

Other
type: Population
allele count: 286
allele frequency: 3.325581395348837e-1
allele num: 860
num of homozygotes: 35

European (Non-Finnish)
type: Population
allele count: 21876
allele frequency: 3.52588485590871e-1
allele num: 62044
num of homozygotes: 3612

Latino
type: Population
allele count: 1966
allele frequency: 1.930479183032207e-1
allele num: 10184
num of homozygotes: 168

European (Finnish)
type: Population
allele count: 2067
allele frequency: 3.313562039115101e-1
allele num: 6238
num of homozygotes: 345

BaseQRankSum
type: SiteQuality
SIO_000300: -3.21e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.778e1

VQSLOD
type: SiteQuality
SIO_000300: 5.84e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.15e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.8e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.7e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.692735e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.17e-1

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6810
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9006
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8946
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.577433549171824e-5
allele num: 55906
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 788
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5708
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15102
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.47e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.17e0

DP
type: SiteQuality
SIO_000300: 1.150202e6

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.536e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.9e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.67e0

VQSLOD
type: SiteQuality
SIO_000300: 3.96e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.3e-3

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1302
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GenotypeQuality
all individuals: 1142
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5676
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6780
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.802386359540031e-5
allele num: 55482
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8928
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 784
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8876
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15044
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.36e-1

FS
type: SiteQuality
SIO_000300: 3.647e0

DP
type: SiteQuality
SIO_000300: 1.133052e6

MQ
type: SiteQuality
SIO_000300: 5.919e1

MQRankSum
type: SiteQuality
SIO_000300: 1.87e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.4e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 3.62e0

VQSLOD
type: SiteQuality
SIO_000300: 4.05e-1

QD
type: SiteQuality
SIO_000300: 1.096e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.36e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 191
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GenotypeQuality
all individuals: 566
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variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.160900859066636e-4
allele num: 8614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8362
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.866995257832045e-5
allele num: 53562
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 758
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14778
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6518
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5500
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.4e-3

MQRankSum
type: SiteQuality
SIO_000300: -2.3e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 3.72e0

QD
type: SiteQuality
SIO_000300: 1.715e1

DP
type: SiteQuality
SIO_000300: 1.086816e6

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.76e-1

FS
type: SiteQuality
SIO_000300: 3.507e0

VQSLOD
type: SiteQuality
SIO_000300: 3.31e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 566
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GenotypeQuality
all individuals: 388
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8272
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 53338
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8558
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6480
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5488
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 764
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.779661016949152e-5
allele num: 14750
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.21e0

DP
type: SiteQuality
SIO_000300: 1.080719e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.7e-3

MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 2.138e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.73e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.959e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.57e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.923964906880098e-5
allele num: 51976
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5372
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8388
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14562
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6300
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7868
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.16e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.5e-3

MQ
type: SiteQuality
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QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: -2.8e-1

FS
type: SiteQuality
SIO_000300: 7.7e0

MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 1.16e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.585e0

DP
type: SiteQuality
SIO_000300: 1.065151e6

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 722
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5298
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6240
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8304
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14444
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.952209901608621e-5
allele num: 51224
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.05726e6

QD
type: SiteQuality
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MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
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MQ
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 716
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5254
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.966181675186787e-5
allele num: 50860
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6170
num of homozygotes: 0

QD
type: SiteQuality
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VQSLOD
type: SiteQuality
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DP
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 6.39e-1

FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-3

MQ
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: -1.159e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6478
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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South Asian
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allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.590431961320695e-5
allele num: 62876
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

VQSLOD
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DP
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ReadPosRankSum
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QD
type: SiteQuality
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FS
type: SiteQuality
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MQRankSum
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SIO_000300: 2.25e-1

MQ
type: SiteQuality
SIO_000300: 5.315e1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.65e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.96e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10162
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.510254628930438e-5
allele num: 66214
num of homozygotes: 0

East Asian
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Other
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South Asian
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allele frequency: 0.0e0
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QD
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MQRankSum
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SIO_000300: -2.79e-1

ReadPosRankSum
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InbreedingCoeff
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FS
type: SiteQuality
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VQSLOD
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ClippingRankSum
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SIO_000300: -1.082e0

MQ
type: SiteQuality
SIO_000300: 5.903e1

BaseQRankSum
type: SiteQuality
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 0.0e0
allele num: 16442
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.510756586898719e-5
allele num: 66192
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 10140
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InbreedingCoeff
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 5.568e0

DP
type: SiteQuality
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MQRankSum
type: SiteQuality
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BaseQRankSum
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MQ
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QD
type: SiteQuality
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VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.1e-2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 1
allele frequency: 1.054185114906177e-4
allele num: 9486
num of homozygotes: 0

South Asian
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allele frequency: 1.262945188178833e-4
allele num: 15836
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6476
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.595710729558946e-5
allele num: 62668
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8208
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11212
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.551e1

FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.9e-3

ReadPosRankSum
type: SiteQuality
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DP
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VQSLOD
type: SiteQuality
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MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -2.56e-1

QD
type: SiteQuality
SIO_000300: 7.36e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.29e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6468
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11240
num of homozygotes: 0

East Asian
type: Population
allele count: 4
allele frequency: 4.875670404680643e-4
allele num: 8204
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62782
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9462
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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MQ
type: SiteQuality
SIO_000300: 5.821e1

QD
type: SiteQuality
SIO_000300: 1.1e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.474844e6

ClippingRankSum
type: SiteQuality
SIO_000300: 7.000000000000001e-2

BaseQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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VQSLOD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6504
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
type: Population
allele count: 28
allele frequency: 4.437682261950044e-4
allele num: 63096
num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 9504
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8226
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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BaseQRankSum
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ClippingRankSum
type: SiteQuality
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DP
type: SiteQuality
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VQSLOD
type: SiteQuality
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FS
type: SiteQuality
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InbreedingCoeff
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MQRankSum
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MQ
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ReadPosRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6504
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11272
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.584886522125016e-5
allele num: 63096
num of homozygotes: 0

African
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
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South Asian
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MQRankSum
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VQSLOD
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InbreedingCoeff
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ReadPosRankSum
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FS
type: SiteQuality
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ClippingRankSum
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MQ
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BaseQRankSum
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QD
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DP
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 3
allele frequency: 3.589375448671931e-4
allele num: 8358
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South Asian
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European (Non-Finnish)
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allele num: 64016
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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Other
type: Population
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allele num: 888
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African
type: Population
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Latino
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DP
type: SiteQuality
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FS
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InbreedingCoeff
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MQRankSum
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QD
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ReadPosRankSum
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ClippingRankSum
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BaseQRankSum
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MQ
type: SiteQuality
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

Latino
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East Asian
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Other
type: Population
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African
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European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 2
allele frequency: 3.119443491281155e-5
allele num: 64114
num of homozygotes: 0

MQRankSum
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QD
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FS
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ClippingRankSum
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VQSLOD
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InbreedingCoeff
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BaseQRankSum
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ReadPosRankSum
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MQ
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DP
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11350
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9790
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.557729453548508e-5
allele num: 64196
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16156
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6546
num of homozygotes: 0

East Asian
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allele count: 4
allele frequency: 4.7744091668656e-4
allele num: 8378
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.618391e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

FS
type: SiteQuality
SIO_000300: 2.776e0

VQSLOD
type: SiteQuality
SIO_000300: 1.92e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.88e-1

QD
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SIO_000300: 9.68e0

MQRankSum
type: SiteQuality
SIO_000300: 1.57e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.47e-1

MQ
type: SiteQuality
SIO_000300: 5.919e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.639999999999999e-1

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8394
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9814
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6548
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11342
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16178
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.555403471660549e-5
allele num: 64292
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.53e0

DP
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SIO_000300: 1.621327e6

MQ
type: SiteQuality
SIO_000300: 5.425e1

VQSLOD
type: SiteQuality
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FS
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SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
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SIO_000300: 1.195e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.87e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.43e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10118
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11490
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66130
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16426
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
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allele count: 1
allele frequency: 1.519295047098146e-4
allele num: 6582
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.25e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.2e-3

QD
type: SiteQuality
SIO_000300: 8.84e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.78e0

MQ
type: SiteQuality
SIO_000300: 6.004e1

VQSLOD
type: SiteQuality
SIO_000300: 8.63e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.54e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.16e0

MQRankSum
type: SiteQuality
SIO_000300: 7.15e-1

DP
type: SiteQuality
SIO_000300: 1.464253e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 31

GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 20
allele frequency: 3.040900106431504e-4
allele num: 65770
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16342
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.002004008016032e-4
allele num: 9980
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6574
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8536
num of homozygotes: 0

Latino
type: Population
allele count: 9
allele frequency: 7.85751702462022e-4
allele num: 11454
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.6e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -2.56e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.86e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.9e-3

QD
type: SiteQuality
SIO_000300: 1.568e1

VQSLOD
type: SiteQuality
SIO_000300: 5.93e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.15e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.436396e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.056141315974451e-5
allele num: 65442
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16294
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11436
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9886
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8504
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6566
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -5.85e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

FS
type: SiteQuality
SIO_000300: 2.476e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.8e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.100000000000001e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.84e0

QD
type: SiteQuality
SIO_000300: 1.092e1

DP
type: SiteQuality
SIO_000300: 1.404449e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.81e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.213057867172188e-5
allele num: 62246
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6456
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11270
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15712
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9022
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.49e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.11e0

DP
type: SiteQuality
SIO_000300: 1.280011e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.25e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.52e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.06e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 9.68e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15650
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11262
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8028
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.612955256621181e-5
allele num: 61998
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6454
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 8960
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BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.45e0

DP
type: SiteQuality
SIO_000300: 1.283918e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 4.944e1

FS
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 9.57e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.376e0

MQRankSum
type: SiteQuality
SIO_000300: -1.799e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.22e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8044
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.218124477054773e-5
allele num: 62148
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6484
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15920
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MQRankSum
type: SiteQuality
SIO_000300: 3.26e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

ReadPosRankSum
type: SiteQuality
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VQSLOD
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ClippingRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
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BaseQRankSum
type: SiteQuality
SIO_000300: -2.739e0

DP
type: SiteQuality
SIO_000300: 1.479911e6

QD
type: SiteQuality
SIO_000300: 1.362e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15956
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8070
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
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European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.602615468444501e-5
allele num: 62398
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.18e-1

DP
type: SiteQuality
SIO_000300: 1.499182e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
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SIO_000300: 2.08e0

MQRankSum
type: SiteQuality
SIO_000300: -8.27e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

FS
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SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.56e-1

QD
type: SiteQuality
SIO_000300: 1.24e1

VQSLOD
type: SiteQuality
SIO_000300: 1.47e0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 62534
num of homozygotes: 0

South Asian
type: Population
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allele frequency: 0.0e0
allele num: 15988
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8084
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6500
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.65e0

QD
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MQ
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ReadPosRankSum
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MQRankSum
type: SiteQuality
SIO_000300: -3.61e-1

FS
type: SiteQuality
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ClippingRankSum
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SIO_000300: -1.652e0

DP
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VQSLOD
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SIO_000300: -7.033e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele frequency: 0.0e0
allele num: 11198
num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 9744
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 63464
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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East Asian
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allele count: 2
allele frequency: 2.427773731488225e-4
allele num: 8238
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
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BaseQRankSum
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ClippingRankSum
type: SiteQuality
SIO_000300: 3.1e-2

InbreedingCoeff
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MQRankSum
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DP
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QD
type: SiteQuality
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ReadPosRankSum
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SIO_000300: 1.3e0

MQ
type: SiteQuality
SIO_000300: 4.957e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 0.0e0
allele num: 8326
num of homozygotes: 0

European (Non-Finnish)
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allele count: 4
allele frequency: 6.25058599243679e-5
allele num: 63994
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 9816
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16138
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6542
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11232
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.4e-3

MQRankSum
type: SiteQuality
SIO_000300: -4.08e-1

QD
type: SiteQuality
SIO_000300: 1.531e1

FS
type: SiteQuality
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VQSLOD
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BaseQRankSum
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SIO_000300: 3.79e0

DP
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.36e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.6e-2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele frequency: 0.0e0
allele num: 8388
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11268
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9858
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6542
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.107230525432682e-5
allele num: 64366
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.63e0

FS
type: SiteQuality
SIO_000300: 2.976e0

MQRankSum
type: SiteQuality
SIO_000300: 4.17e-1

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.085e1

DP
type: SiteQuality
SIO_000300: 1.630418e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.2e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -3.32e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.669999999999999e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11348
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.536806516059628e-5
allele num: 65070
num of homozygotes: 0

African
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allele frequency: 0.0e0
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East Asian
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Other
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 7
allele frequency: 1.066422912858013e-3
allele num: 6564
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
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QD
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DP
type: SiteQuality
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ClippingRankSum
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InbreedingCoeff
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MQ
type: SiteQuality
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MQRankSum
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FS
type: SiteQuality
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VQSLOD
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ReadPosRankSum
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GenotypeQuality
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variant carriers: 8

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6566
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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Other
type: Population
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African
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allele frequency: 8.043434546551378e-4
allele num: 9946
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South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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num of homozygotes: 0

MQRankSum
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ClippingRankSum
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FS
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QD
type: SiteQuality
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InbreedingCoeff
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DP
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VQSLOD
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ReadPosRankSum
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BaseQRankSum
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MQ
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SIO_000300: 6.0e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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num of homozygotes: 0

African
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allele frequency: 1.002004008016032e-4
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European (Finnish)
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European (Non-Finnish)
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East Asian
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Other
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South Asian
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InbreedingCoeff
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VQSLOD
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QD
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ReadPosRankSum
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FS
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MQRankSum
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MQ
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BaseQRankSum
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DP
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ClippingRankSum
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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Latino
type: Population
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European (Finnish)
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European (Non-Finnish)
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African
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allele frequency: 2.994011976047904e-4
allele num: 10020
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MQRankSum
type: SiteQuality
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ClippingRankSum
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ReadPosRankSum
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MQ
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QD
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BaseQRankSum
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InbreedingCoeff
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DP
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VQSLOD
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FS
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GenotypeQuality
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variant carriers: 20

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 1.163602513381429e-4
allele num: 8594
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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Latino
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allele frequency: 8.716875871687587e-5
allele num: 11472
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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South Asian
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allele frequency: 1.102670913991669e-3
allele num: 16324
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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BaseQRankSum
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ReadPosRankSum
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MQRankSum
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FS
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MQ
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QD
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VQSLOD
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ClippingRankSum
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InbreedingCoeff
type: SiteQuality
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DP
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6602
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Latino
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allele frequency: 0.0e0
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South Asian
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.51846452866861e-5
allele num: 65856
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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Other
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QD
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ClippingRankSum
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MQ
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DP
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VQSLOD
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ReadPosRankSum
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MQRankSum
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FS
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SIO_000300: 1.975e0

BaseQRankSum
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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South Asian
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allele frequency: 0.0e0
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African
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allele num: 10126
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 65856
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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FS
type: SiteQuality
SIO_000300: 2.635e0

DP
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InbreedingCoeff
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QD
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MQRankSum
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ClippingRankSum
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BaseQRankSum
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VQSLOD
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ReadPosRankSum
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MQ
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SIO_000300: 6.0e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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South Asian
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allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
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African
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allele count: 1
allele frequency: 9.877518767285657e-5
allele num: 10124
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65842
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.33e-1

ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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QD
type: SiteQuality
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VQSLOD
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InbreedingCoeff
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MQ
type: SiteQuality
SIO_000300: 5.967e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.811e0

FS
type: SiteQuality
SIO_000300: 6.948e0

DP
type: SiteQuality
SIO_000300: 1.663401e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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South Asian
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European (Finnish)
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Latino
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
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VQSLOD
type: SiteQuality
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ReadPosRankSum
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QD
type: SiteQuality
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DP
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MQ
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BaseQRankSum
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MQRankSum
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ClippingRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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European (Finnish)
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African
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Other
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European (Non-Finnish)
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allele num: 65698
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InbreedingCoeff
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BaseQRankSum
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FS
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QD
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MQRankSum
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ClippingRankSum
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VQSLOD
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ReadPosRankSum
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MQ
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DP
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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European (Finnish)
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South Asian
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Latino
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European (Non-Finnish)
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allele num: 65502
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Other
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African
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InbreedingCoeff
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ReadPosRankSum
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ClippingRankSum
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FS
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BaseQRankSum
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MQRankSum
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MQ
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VQSLOD
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QD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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num of homozygotes: 0

South Asian
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Latino
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European (Finnish)
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European (Non-Finnish)
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African
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Other
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MQRankSum
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DP
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VQSLOD
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InbreedingCoeff
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BaseQRankSum
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FS
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QD
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ClippingRankSum
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ReadPosRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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bin: 9.75e1
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 518
bin: 3.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10064
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.539598472718315e-5
allele num: 64952
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11390
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14892
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8526
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.59423e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 3.98e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.68e0

VQSLOD
type: SiteQuality
SIO_000300: 5.1e0

MQRankSum
type: SiteQuality
SIO_000300: 6.69e-1

QD
type: SiteQuality
SIO_000300: 1.805e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.13e-1

MQ
type: SiteQuality
SIO_000300: 5.992e1

GenotypeQuality
all individuals: 171
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8446
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14288
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.553036185743128e-5
allele num: 64390
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11326
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9998
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 850
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.41e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

DP
type: SiteQuality
SIO_000300: 1.53922e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.19e0

VQSLOD
type: SiteQuality
SIO_000300: -2.648e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.594e0

MQRankSum
type: SiteQuality
SIO_000300: 1.36e0

FS
type: SiteQuality
SIO_000300: 8.246e0

QD
type: SiteQuality
SIO_000300: 1.378e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8332
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 846
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13600
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11278
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9910
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.569021244547651e-5
allele num: 63734
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6546
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 9.2e-2

DP
type: SiteQuality
SIO_000300: 1.47439e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -2.785e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.378e0

QD
type: SiteQuality
SIO_000300: 1.731e1

MQ
type: SiteQuality
SIO_000300: 5.849e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.194e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.21e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 4773
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1135
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9906
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.190476190476191e-3
allele num: 840
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13540
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8318
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.100559713225583e-4
allele num: 63604
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11262
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 20
allele frequency: 3.056234718826406e-3
allele num: 6544
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.64e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.6e-2

DP
type: SiteQuality
SIO_000300: 1.457342e6

VQSLOD
type: SiteQuality
SIO_000300: 4.33e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.88e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.6e0

QD
type: SiteQuality
SIO_000300: 1.696e1

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 770
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13114
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8228
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11192
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9854
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.58624409124076e-5
allele num: 63042
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6540
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 828
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.48e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 7.45e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

QD
type: SiteQuality
SIO_000300: 1.245e1

DP
type: SiteQuality
SIO_000300: 1.443259e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.02e0

MQRankSum
type: SiteQuality
SIO_000300: -6.03e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.14e0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 4824
bin: 9.75e1
variant carriers: 27

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 828
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.529051987767584e-4
allele num: 6540
num of homozygotes: 0

African
type: Population
allele count: 6
allele frequency: 6.090133982947625e-4
allele num: 9852
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8234
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.613826709304096e-5
allele num: 13134
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.679528403001072e-4
allele num: 11196
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 16
allele frequency: 2.537266095781795e-4
allele num: 63060
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.58e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.61e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.616e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.08e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.39e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 3.06e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.443397e6

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 469
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1230
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6546
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 358
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 222
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.313370107696349e-4
allele num: 7614
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1746
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 2.066115702479339e-3
allele num: 484
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.07e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.45e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.438e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.29e-1

DP
type: SiteQuality
SIO_000300: 3.49753e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.9e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.34e-1

QD
type: SiteQuality
SIO_000300: 1.245e1

FS
type: SiteQuality
SIO_000300: 1.1925e1

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1766
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.305142260506395e-4
allele num: 7662
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 356
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6676
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 222
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African
type: Population
allele count: 0
allele frequency: 0.0e0
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 488
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.09e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 6.1e0

VQSLOD
type: SiteQuality
SIO_000300: -1.424e0

MQRankSum
type: SiteQuality
SIO_000300: -9.5e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.483e0

MQ
type: SiteQuality
SIO_000300: 5.788e1

FS
type: SiteQuality
SIO_000300: 6.412e0

DP
type: SiteQuality
SIO_000300: 3.56106e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.45e-1

QD
type: SiteQuality
SIO_000300: 9.859999999999999e0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 711
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GenotypeQuality
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GenotypeQuality
all individuals: 325
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GenotypeQuality
all individuals: 27
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 488
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1274
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 2.610284521012791e-4
allele num: 7662
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1764
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 356
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6668
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 220
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.2e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.97e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.36e-1

QD
type: SiteQuality
SIO_000300: 1.009e1

DP
type: SiteQuality
SIO_000300: 3.56192e5

ClippingRankSum
type: SiteQuality
SIO_000300: -5.72e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.12e-2

FS
type: SiteQuality
SIO_000300: 2.855e0

VQSLOD
type: SiteQuality
SIO_000300: -1.613e0

MQ
type: SiteQuality
SIO_000300: 5.846e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 33

GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1718
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 3.067484662576687e-3
allele num: 326
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 460
num of homozygotes: 0

African
type: Population
allele count: 32
allele frequency: 2.74914089347079e-2
allele num: 1164
num of homozygotes: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6372
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 4.672897196261682e-3
allele num: 214
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 2.613012803762738e-4
allele num: 7654
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.79e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.03e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.13e-1

MQ
type: SiteQuality
SIO_000300: 5.813e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.94e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.9e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 1.46e0

DP
type: SiteQuality
SIO_000300: 3.49657e5

QD
type: SiteQuality
SIO_000300: 1.126e1

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

South Asian
type: Population
allele count: 2
allele frequency: 2.617801047120419e-4
allele num: 7640
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1034
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1684
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6066
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 276
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 424
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 210
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.8e0

DP
type: SiteQuality
SIO_000300: 3.37131e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.58e-1

QD
type: SiteQuality
SIO_000300: 1.288e1

FS
type: SiteQuality
SIO_000300: 9.49e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.34e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.96e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.07e-1

MQ
type: SiteQuality
SIO_000300: 5.901e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.86e-1

GenotypeQuality
all individuals: 572
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1906
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 539
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variant carriers: 0

GenotypeQuality
all individuals: 2244
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 424
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.648532805802836e-4
allele num: 6066
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1684
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 210
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7640
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1034
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 276
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.34e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.86e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.8e0

FS
type: SiteQuality
SIO_000300: 9.49e-1

MQ
type: SiteQuality
SIO_000300: 5.901e1

VQSLOD
type: SiteQuality
SIO_000300: 1.96e0

DP
type: SiteQuality
SIO_000300: 3.37131e5

QD
type: SiteQuality
SIO_000300: 1.288e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.58e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.07e-1

GenotypeQuality
all individuals: 28
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
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variant carriers: 0

GenotypeQuality
all individuals: 140
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 9
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GenotypeQuality
all individuals: 2242
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GenotypeQuality
all individuals: 1880
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GenotypeQuality
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GenotypeQuality
all individuals: 7
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GenotypeQuality
all individuals: 73
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1684
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6058
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 420
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 278
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 210
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1030
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7638
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.57e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.5e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.5e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.19e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.5e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.5e-1

QD
type: SiteQuality
SIO_000300: 4.37e0

DP
type: SiteQuality
SIO_000300: 3.36368e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 844
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 8
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GenotypeQuality
all individuals: 570
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variant carriers: 0

GenotypeQuality
all individuals: 420
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6036
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 5.236973029588898e-4
allele num: 7638
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 210
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1020
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1678
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 274
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 420
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.061e1

MQRankSum
type: SiteQuality
SIO_000300: 1.14e0

VQSLOD
type: SiteQuality
SIO_000300: -1.668e0

MQ
type: SiteQuality
SIO_000300: 5.87e1

FS
type: SiteQuality
SIO_000300: 1.1152e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.19e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.699999999999999e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.19e-2

DP
type: SiteQuality
SIO_000300: 3.35758e5

BaseQRankSum
type: SiteQuality
SIO_000300: -2.664e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 20
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GenotypeQuality
all individuals: 565
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1622
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 206
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.537318712415989e-4
allele num: 5654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 246
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 378
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7624
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.41e-1

QD
type: SiteQuality
SIO_000300: 1.116e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.51e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 3.68e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -3.5e-1

MQRankSum
type: SiteQuality
SIO_000300: -9.71e-1

DP
type: SiteQuality
SIO_000300: 3.24205e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.13e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63646
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.98003992015968e-5
allele num: 10020
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14788
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11120
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6486
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Other
type: Population
allele count: 0
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allele num: 868
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.9e-1

MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.895e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.29e0

FS
type: SiteQuality
SIO_000300: 3.424e0

DP
type: SiteQuality
SIO_000300: 1.385326e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.352e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.8e-3

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.393e1