8-68007889-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68007889
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 68007889
    reference: chr 8
allele count: 1
allele frequency: 8.414533582403528e-6
allele num: 118842
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000415782
  ensembl transcript: ENST00000412460
  gene symbol: CSPP1
  hgvsc: ENST00000412460.1:c.-11T>G
  variant of: http://identifiers.org/hgnc/26193
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000262210
  ensembl transcript: ENST00000262210
  gene symbol: CSPP1
  hgvsc: ENST00000262210.5:c.872T>G
  hgvsp: ENSP00000262210.5:p.Val291Gly
  variant of: http://identifiers.org/hgnc/26193
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000430092
  ensembl transcript: ENST00000519668
  gene symbol: CSPP1
  hgvsc: ENST00000519668.1:c.-11T>G
  variant of: http://identifiers.org/hgnc/26193
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000428694
  ensembl transcript: ENST00000519163
  gene symbol: CSPP1
  hgvsc: ENST00000519163.1:c.869T>G
  hgvsp: ENSP00000428694.1:p.Val290Gly
  variant of: http://identifiers.org/hgnc/26193
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12369
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41408
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 758
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2862
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 828
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 829
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 523
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 322
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4002
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Val291Gly
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD

8-68007893-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68007893
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 68007893
    reference: chr 8
allele count: 4
allele frequency: 3.368761474843773e-5
allele num: 118738
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000262210
  ensembl transcript: ENST00000262210
  gene symbol: CSPP1
  hgvsc: ENST00000262210.5:c.876T>G
  hgvsp: ENSP00000262210.5:p.Ser292Arg
  variant of: http://identifiers.org/hgnc/26193
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000415782
  ensembl transcript: ENST00000412460
  gene symbol: CSPP1
  hgvsc: ENST00000412460.1:c.-7T>G
  variant of: http://identifiers.org/hgnc/26193
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000430092
  ensembl transcript: ENST00000519668
  gene symbol: CSPP1
  hgvsc: ENST00000519668.1:c.-7T>G
  variant of: http://identifiers.org/hgnc/26193
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000428694
  ensembl transcript: ENST00000519163
  gene symbol: CSPP1
  hgvsc: ENST00000519163.1:c.873T>G
  hgvsp: ENSP00000428694.1:p.Ser291Arg
  variant of: http://identifiers.org/hgnc/26193
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12386
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41348
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 843
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2856
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 829
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 522
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50361
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1176
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 827
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 322
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ser292Arg
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: DP

8-68007909-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68007909
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 68007909
    reference: chr 8
allele count: 3
allele frequency: 2.541985120913759e-5
allele num: 118018
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000430092
  ensembl transcript: ENST00000519668
  gene symbol: CSPP1
  hgvsc: ENST00000519668.1:c.10A>G
  hgvsp: ENSP00000430092.1:p.Arg4Gly
  variant of: http://identifiers.org/hgnc/26193
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000428694
  ensembl transcript: ENST00000519163
  gene symbol: CSPP1
  hgvsc: ENST00000519163.1:c.889A>G
  hgvsp: ENSP00000428694.1:p.Arg297Gly
  variant of: http://identifiers.org/hgnc/26193
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000415782
  ensembl transcript: ENST00000412460
  gene symbol: CSPP1
  hgvsc: ENST00000412460.1:c.10A>G
  hgvsp: ENSP00000415782.1:p.Arg4Gly
  variant of: http://identifiers.org/hgnc/26193
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000262210
  ensembl transcript: ENST00000262210
  gene symbol: CSPP1
  hgvsc: ENST00000262210.5:c.892A>G
  hgvsp: ENSP00000262210.5:p.Arg298Gly
  variant of: http://identifiers.org/hgnc/26193
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1015
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40945
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12254
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2848
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1476
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49882
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 521
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 322
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 819
  bin: 7.25e1
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genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3959
  bin: 6.75e1
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genotype quality: GenotypeQuality
  all individuals: 217
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 822
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 358
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1433
  bin: 9.75e1
  variant carriers: 3
hgvs: p.Arg298Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
population: Other
reference allele: A
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD

http://identifiers.org/exac.variant/8-68007917-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68007917
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 68007917
    reference: chr 8
allele count: 1
allele frequency: 8.503979862575686e-6
allele num: 117592
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000430092
  ensembl transcript: ENST00000519668
  gene symbol: CSPP1
  hgvsc: ENST00000519668.1:c.18A>C
  hgvsp: ENSP00000430092.1:p.Arg6Ser
  variant of: http://identifiers.org/hgnc/26193
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000262210
  ensembl transcript: ENST00000262210
  gene symbol: CSPP1
  hgvsc: ENST00000262210.5:c.900A>C
  hgvsp: ENSP00000262210.5:p.Arg300Ser
  variant of: http://identifiers.org/hgnc/26193
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000415782
  ensembl transcript: ENST00000412460
  gene symbol: CSPP1
  hgvsc: ENST00000412460.1:c.18A>C
  hgvsp: ENSP00000415782.1:p.Arg6Ser
  variant of: http://identifiers.org/hgnc/26193
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000428694
  ensembl transcript: ENST00000519163
  gene symbol: CSPP1
  hgvsc: ENST00000519163.1:c.897A>C
  hgvsp: ENSP00000428694.1:p.Arg299Ser
  variant of: http://identifiers.org/hgnc/26193
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1124
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40707
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12178
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 766
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2850
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3937
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 450
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1657
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 520
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 817
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1431
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Arg300Ser
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum

8-68007925-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68007925
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 68007925
    reference: chr 8
allele count: 1
allele frequency: 8.540293102859289e-6
allele num: 117092
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000430092
  ensembl transcript: ENST00000519668
  gene symbol: CSPP1
  hgvsc: ENST00000519668.1:c.26G>C
  hgvsp: ENSP00000430092.1:p.Ser9Thr
  variant of: http://identifiers.org/hgnc/26193
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000428694
  ensembl transcript: ENST00000519163
  gene symbol: CSPP1
  hgvsc: ENST00000519163.1:c.905G>C
  hgvsp: ENSP00000428694.1:p.Ser302Thr
  variant of: http://identifiers.org/hgnc/26193
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000262210
  ensembl transcript: ENST00000262210
  gene symbol: CSPP1
  hgvsc: ENST00000262210.5:c.908G>C
  hgvsp: ENSP00000262210.5:p.Ser303Thr
  variant of: http://identifiers.org/hgnc/26193
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000415782
  ensembl transcript: ENST00000412460
  gene symbol: CSPP1
  hgvsc: ENST00000412460.1:c.26G>C
  hgvsp: ENSP00000415782.1:p.Ser9Thr
  variant of: http://identifiers.org/hgnc/26193
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 932
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12116
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 761
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40306
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 549
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1251
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2843
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1957
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 809
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49098
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 516
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 322
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1431
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 803
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 558
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ser303Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: African
reference allele: G
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD

8-68007936-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68007936
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 68007936
    reference: chr 8
allele count: 1
allele frequency: 8.619649352664333e-6
allele num: 116014
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000430092
  ensembl transcript: ENST00000519668
  gene symbol: CSPP1
  hgvsc: ENST00000519668.1:c.37A>G
  hgvsp: ENSP00000430092.1:p.Arg13Gly
  variant of: http://identifiers.org/hgnc/26193
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000262210
  ensembl transcript: ENST00000262210
  gene symbol: CSPP1
  hgvsc: ENST00000262210.5:c.919A>G
  hgvsp: ENSP00000262210.5:p.Arg307Gly
  variant of: http://identifiers.org/hgnc/26193
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000428694
  ensembl transcript: ENST00000519163
  gene symbol: CSPP1
  hgvsc: ENST00000519163.1:c.916A>G
  hgvsp: ENSP00000428694.1:p.Arg306Gly
  variant of: http://identifiers.org/hgnc/26193
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000415782
  ensembl transcript: ENST00000412460
  gene symbol: CSPP1
  hgvsc: ENST00000412460.1:c.37A>G
  hgvsp: ENSP00000415782.1:p.Arg13Gly
  variant of: http://identifiers.org/hgnc/26193
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2832
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 725
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1572
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1528
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11835
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39345
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47977
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 782
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 130
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2807
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 728
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1435
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Arg307Gly
num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
reference allele: A
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum

8-68007941-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68007941
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 68007941
    reference: chr 8
allele count: 1
allele frequency: 8.680254157841742e-6
allele num: 115204
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000428694
  ensembl transcript: ENST00000519163
  gene symbol: CSPP1
  hgvsc: ENST00000519163.1:c.921A>G
  hgvsp: ENST00000519163.1:c.921A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/26193
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000262210
  ensembl transcript: ENST00000262210
  gene symbol: CSPP1
  hgvsc: ENST00000262210.5:c.924A>G
  hgvsp: ENST00000262210.5:c.924A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/26193
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000430092
  ensembl transcript: ENST00000519668
  gene symbol: CSPP1
  hgvsc: ENST00000519668.1:c.42A>G
  hgvsp: ENST00000519668.1:c.42A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/26193
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000415782
  ensembl transcript: ENST00000412460
  gene symbol: CSPP1
  hgvsc: ENST00000412460.1:c.42A>G
  hgvsp: ENST00000412460.1:c.42A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/26193
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1825
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38708
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2814
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1954
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11618
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 758
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 513
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3749
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 760
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 813
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 273
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3425
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1431
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Arg308Arg
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: A
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD

8-68007946-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68007946
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 68007946
    reference: chr 8
allele count: 4
allele frequency: 3.499746268395542e-5
allele num: 114294
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000428694
  ensembl transcript: ENST00000519163
  gene symbol: CSPP1
  hgvsc: ENST00000519163.1:c.926C>T
  hgvsp: ENSP00000428694.1:p.Ser309Leu
  variant of: http://identifiers.org/hgnc/26193
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000262210
  ensembl transcript: ENST00000262210
  gene symbol: CSPP1
  hgvsc: ENST00000262210.5:c.929C>T
  hgvsp: ENSP00000262210.5:p.Ser310Leu
  variant of: http://identifiers.org/hgnc/26193
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000415782
  ensembl transcript: ENST00000412460
  gene symbol: CSPP1
  hgvsc: ENST00000412460.1:c.47C>T
  hgvsp: ENSP00000415782.1:p.Ser16Leu
  variant of: http://identifiers.org/hgnc/26193
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000430092
  ensembl transcript: ENST00000519668
  gene symbol: CSPP1
  hgvsc: ENST00000519668.1:c.47C>T
  hgvsp: ENSP00000430092.1:p.Ser16Leu
  variant of: http://identifiers.org/hgnc/26193
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2083
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38190
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2314
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11396
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2786
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 752
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3974
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 778
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 512
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 310
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 234
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 934
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1431
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 46326
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3704
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ser310Leu
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: Other
reference allele: C
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP

8-68007947-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68007947
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 68007947
    reference: chr 8
allele count: 6
allele frequency: 5.255965520866183e-5
allele num: 114156
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000415782
  ensembl transcript: ENST00000412460
  gene symbol: CSPP1
  hgvsc: ENST00000412460.1:c.48G>A
  hgvsp: ENST00000412460.1:c.48G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26193
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000428694
  ensembl transcript: ENST00000519163
  gene symbol: CSPP1
  hgvsc: ENST00000519163.1:c.927G>A
  hgvsp: ENST00000519163.1:c.927G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26193
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000430092
  ensembl transcript: ENST00000519668
  gene symbol: CSPP1
  hgvsc: ENST00000519668.1:c.48G>A
  hgvsp: ENST00000519668.1:c.48G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26193
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000262210
  ensembl transcript: ENST00000262210
  gene symbol: CSPP1
  hgvsc: ENST00000262210.5:c.930G>A
  hgvsp: ENST00000262210.5:c.930G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/26193
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11341
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2142
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38099
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 916
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2412
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2754
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 311
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 959
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4116
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3694
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46203
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 510
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 775
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Ser310Ser
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: DP

8-68007948-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68007948
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 68007948
    reference: chr 8
allele count: 1
allele frequency: 8.768545473676827e-6
allele num: 114044
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000428694
  ensembl transcript: ENST00000519163
  gene symbol: CSPP1
  hgvsc: ENST00000519163.1:c.928A>G
  hgvsp: ENSP00000428694.1:p.Arg310Gly
  variant of: http://identifiers.org/hgnc/26193
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000430092
  ensembl transcript: ENST00000519668
  gene symbol: CSPP1
  hgvsc: ENST00000519668.1:c.49A>G
  hgvsp: ENSP00000430092.1:p.Arg17Gly
  variant of: http://identifiers.org/hgnc/26193
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000262210
  ensembl transcript: ENST00000262210
  gene symbol: CSPP1
  hgvsc: ENST00000262210.5:c.931A>G
  hgvsp: ENSP00000262210.5:p.Arg311Gly
  variant of: http://identifiers.org/hgnc/26193
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000415782
  ensembl transcript: ENST00000412460
  gene symbol: CSPP1
  hgvsc: ENST00000412460.1:c.49A>G
  hgvsp: ENSP00000415782.1:p.Arg17Gly
  variant of: http://identifiers.org/hgnc/26193
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2744
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2211
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 927
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11300
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2483
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37999
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46123
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 319
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 960
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 216
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3695
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 747
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 323
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 780
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Arg311Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: A
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum

8-68007950-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68007950
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 68007950
    reference: chr 8
allele count: 1
allele frequency: 8.799563541648334e-6
allele num: 113642
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000415782
  ensembl transcript: ENST00000412460
  gene symbol: CSPP1
  hgvsc: ENST00000412460.1:c.51A>G
  hgvsp: ENST00000412460.1:c.51A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/26193
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000428694
  ensembl transcript: ENST00000519163
  gene symbol: CSPP1
  hgvsc: ENST00000519163.1:c.930A>G
  hgvsp: ENST00000519163.1:c.930A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/26193
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000430092
  ensembl transcript: ENST00000519668
  gene symbol: CSPP1
  hgvsc: ENST00000519668.1:c.51A>G
  hgvsp: ENST00000519668.1:c.51A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/26193
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000262210
  ensembl transcript: ENST00000262210
  gene symbol: CSPP1
  hgvsc: ENST00000262210.5:c.933A>G
  hgvsp: ENST00000262210.5:c.933A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/26193
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2671
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2341
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2732
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37681
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11216
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 746
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 779
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 318
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4518
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1021
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45703
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Arg311Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: East Asian
reference allele: A
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD

8-68007952-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68007952
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 68007952
    reference: chr 8
allele count: 1
allele frequency: 8.8265927586633e-6
allele num: 113294
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000428694
  ensembl transcript: ENST00000519163
  gene symbol: CSPP1
  hgvsc: ENST00000519163.1:c.932T>C
  hgvsp: ENSP00000428694.1:p.Val311Ala
  variant of: http://identifiers.org/hgnc/26193
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000430092
  ensembl transcript: ENST00000519668
  gene symbol: CSPP1
  hgvsc: ENST00000519668.1:c.53T>C
  hgvsp: ENSP00000430092.1:p.Val18Ala
  variant of: http://identifiers.org/hgnc/26193
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000262210
  ensembl transcript: ENST00000262210
  gene symbol: CSPP1
  hgvsc: ENST00000262210.5:c.935T>C
  hgvsp: ENSP00000262210.5:p.Val312Ala
  variant of: http://identifiers.org/hgnc/26193
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000415782
  ensembl transcript: ENST00000412460
  gene symbol: CSPP1
  hgvsc: ENST00000412460.1:c.53T>C
  hgvsp: ENSP00000415782.1:p.Val18Ala
  variant of: http://identifiers.org/hgnc/26193
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1051
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37330
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2902
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11089
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2498
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2718
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 280
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 372
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1432
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4837
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45234
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1064
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 783
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3649
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 510
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 740
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Val312Ala
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

http://identifiers.org/exac.variant/8-68007965-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68007965
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 68007965
    reference: chr 8
allele count: 1
allele frequency: 9.098187641021908e-6
allele num: 109912
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000415782
  ensembl transcript: ENST00000412460
  gene symbol: CSPP1
  hgvsc: ENST00000412460.1:c.66C>A
  hgvsp: ENSP00000415782.1:p.Asp22Glu
  variant of: http://identifiers.org/hgnc/26193
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000430092
  ensembl transcript: ENST00000519668
  gene symbol: CSPP1
  hgvsc: ENST00000519668.1:c.66C>A
  hgvsp: ENSP00000430092.1:p.Asp22Glu
  variant of: http://identifiers.org/hgnc/26193
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000262210
  ensembl transcript: ENST00000262210
  gene symbol: CSPP1
  hgvsc: ENST00000262210.5:c.948C>A
  hgvsp: ENSP00000262210.5:p.Asp316Glu
  variant of: http://identifiers.org/hgnc/26193
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000428694
  ensembl transcript: ENST00000519163
  gene symbol: CSPP1
  hgvsc: ENST00000519163.1:c.945C>A
  hgvsp: ENSP00000428694.1:p.Asp315Glu
  variant of: http://identifiers.org/hgnc/26193
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3373
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35494
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3925
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1657
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2621
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10380
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 502
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 740
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1770
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 314
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 363
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1429
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6305
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 223
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42885
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3440
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Asp316Glu
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD

8-68007991-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68007991
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 68007991
    reference: chr 8
allele count: 1
allele frequency: 9.874202658135355e-6
allele num: 101274
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000430092
  ensembl transcript: ENST00000519668
  gene symbol: CSPP1
  hgvsc: ENST00000519668.1:c.68+24T>C
  variant of: http://identifiers.org/hgnc/26193
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000415782
  ensembl transcript: ENST00000412460
  gene symbol: CSPP1
  hgvsc: ENST00000412460.1:c.68+24T>C
  variant of: http://identifiers.org/hgnc/26193
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000428694
  ensembl transcript: ENST00000519163
  gene symbol: CSPP1
  hgvsc: ENST00000519163.1:c.947+24T>C
  variant of: http://identifiers.org/hgnc/26193
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000262210
  ensembl transcript: ENST00000262210
  gene symbol: CSPP1
  hgvsc: ENST00000262210.5:c.950+24T>C
  variant of: http://identifiers.org/hgnc/26193
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2254
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2341
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7928
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5134
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3814
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9523
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 720
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26661
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 489
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 313
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 212
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 629
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 526
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1876
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3893
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 492
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2165
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1429
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 329
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 693
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 276
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31644
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 288
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1034
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 225
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: South Asian
reference allele: T
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD

8-68008007-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68008007
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 68008007
    reference: chr 8
allele count: 1
allele frequency: 1.041623265697263e-5
allele num: 96004
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000415782
  ensembl transcript: ENST00000412460
  gene symbol: CSPP1
  hgvsc: ENST00000412460.1:c.68+40G>A
  variant of: http://identifiers.org/hgnc/26193
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000430092
  ensembl transcript: ENST00000519668
  gene symbol: CSPP1
  hgvsc: ENST00000519668.1:c.68+40G>A
  variant of: http://identifiers.org/hgnc/26193
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000262210
  ensembl transcript: ENST00000262210
  gene symbol: CSPP1
  hgvsc: ENST00000262210.5:c.950+40G>A
  variant of: http://identifiers.org/hgnc/26193
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000428694
  ensembl transcript: ENST00000519163
  gene symbol: CSPP1
  hgvsc: ENST00000519163.1:c.947+40G>A
  variant of: http://identifiers.org/hgnc/26193
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6294
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1659
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11142
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11160
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5431
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4834
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16889
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9450
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1429
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1923
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 787
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4988
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 486
  bin: 8.25e1
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genotype quality: GenotypeQuality
  all individuals: 4722
  bin: 3.75e1
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genotype quality: GenotypeQuality
  all individuals: 660
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 312
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1808
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1007
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 527
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3011
  bin: 2.75e1
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genotype quality: GenotypeQuality
  all individuals: 18522
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 554
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1921
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: DP

8-68008009-AAATT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68008009
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 68008005
    reference: chr 8
allele count: 2
allele frequency: 2.095293969743955e-5
allele num: 95452
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000415782
  ensembl transcript: ENST00000412460
  gene symbol: CSPP1
  hgvsc: ENST00000412460.1:c.68+47_68+50delAATT
  variant of: http://identifiers.org/hgnc/26193
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000428694
  ensembl transcript: ENST00000519163
  gene symbol: CSPP1
  hgvsc: ENST00000519163.1:c.947+47_947+50delAATT
  variant of: http://identifiers.org/hgnc/26193
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000262210
  ensembl transcript: ENST00000262210
  gene symbol: CSPP1
  hgvsc: ENST00000262210.5:c.950+47_950+50delAATT
  variant of: http://identifiers.org/hgnc/26193
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000430092
  ensembl transcript: ENST00000519668
  gene symbol: CSPP1
  hgvsc: ENST00000519668.1:c.68+47_68+50delAATT
  variant of: http://identifiers.org/hgnc/26193
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5068
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4846
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6646
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1581
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12164
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10888
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16179
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 785
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1627
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3044
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1930
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1431
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 721
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16539
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2210
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 663
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5013
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8945
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5230
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2564
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1254
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 261
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 488
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
reference allele: AAATT
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP

8-68015231-CT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68015231
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 68015230
    reference: chr 8
allele count: 1
allele frequency: 8.541314337450248e-6
allele num: 117078
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000415782
  ensembl transcript: ENST00000412460
  gene symbol: CSPP1
  hgvsc: ENST00000412460.1:c.69-40delT
  variant of: http://identifiers.org/hgnc/26193
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000262210
  ensembl transcript: ENST00000262210
  gene symbol: CSPP1
  hgvsc: ENST00000262210.5:c.951-40delT
  variant of: http://identifiers.org/hgnc/26193
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000428694
  ensembl transcript: ENST00000519163
  gene symbol: CSPP1
  hgvsc: ENST00000519163.1:c.948-40delT
  variant of: http://identifiers.org/hgnc/26193
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000430092
  ensembl transcript: ENST00000519668
  gene symbol: CSPP1
  hgvsc: ENST00000519668.1:c.69-40delT
  variant of: http://identifiers.org/hgnc/26193
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1662
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3357
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6936
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 849
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6271
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14912
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23911
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3542
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 537
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2904
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2073
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 745
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1256
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1466
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 940
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1824
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 950
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2636
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34276
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
reference allele: CT
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum

8-68015244-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68015244
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 68015244
    reference: chr 8
allele count: 1
allele frequency: 8.48838788537281e-6
allele num: 117808
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000415782
  ensembl transcript: ENST00000412460
  gene symbol: CSPP1
  hgvsc: ENST00000412460.1:c.69-28A>G
  variant of: http://identifiers.org/hgnc/26193
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000428694
  ensembl transcript: ENST00000519163
  gene symbol: CSPP1
  hgvsc: ENST00000519163.1:c.948-28A>G
  variant of: http://identifiers.org/hgnc/26193
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000430092
  ensembl transcript: ENST00000519668
  gene symbol: CSPP1
  hgvsc: ENST00000519668.1:c.69-28A>G
  variant of: http://identifiers.org/hgnc/26193
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000262210
  ensembl transcript: ENST00000262210
  gene symbol: CSPP1
  hgvsc: ENST00000262210.5:c.951-28A>G
  variant of: http://identifiers.org/hgnc/26193
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3973
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16579
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3561
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 858
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29643
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1417
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1908
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 540
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42636
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 975
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 504
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1776
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 705
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 915
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1758
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2075
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4374
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 912
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 319
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
reference allele: A
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: QD

8-68015248-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68015248
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 68015248
    reference: chr 8
allele count: 1
allele frequency: 8.471130387638926e-6
allele num: 118048
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000415782
  ensembl transcript: ENST00000412460
  gene symbol: CSPP1
  hgvsc: ENST00000412460.1:c.69-24T>C
  variant of: http://identifiers.org/hgnc/26193
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000430092
  ensembl transcript: ENST00000519668
  gene symbol: CSPP1
  hgvsc: ENST00000519668.1:c.69-24T>C
  variant of: http://identifiers.org/hgnc/26193
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000428694
  ensembl transcript: ENST00000519163
  gene symbol: CSPP1
  hgvsc: ENST00000519163.1:c.948-24T>C
  variant of: http://identifiers.org/hgnc/26193
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000262210
  ensembl transcript: ENST00000262210
  gene symbol: CSPP1
  hgvsc: ENST00000262210.5:c.951-24T>C
  variant of: http://identifiers.org/hgnc/26193
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3145
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1400
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 859
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30530
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1277
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17076
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3654
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1202
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 377
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 902
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1580
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44449
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1426
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 484
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 443
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 895
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 532
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 826
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum

8-68015261-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68015261
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 68015261
    reference: chr 8
allele count: 22
allele frequency: 1.847125201504567e-4
allele num: 119104
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000415782
  ensembl transcript: ENST00000412460
  gene symbol: CSPP1
  hgvsc: ENST00000412460.1:c.69-11G>A
  variant of: http://identifiers.org/hgnc/26193
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000430092
  ensembl transcript: ENST00000519668
  gene symbol: CSPP1
  hgvsc: ENST00000519668.1:c.69-11G>A
  variant of: http://identifiers.org/hgnc/26193
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000428694
  ensembl transcript: ENST00000519163
  gene symbol: CSPP1
  hgvsc: ENST00000519163.1:c.948-11G>A
  variant of: http://identifiers.org/hgnc/26193
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000262210
  ensembl transcript: ENST00000262210
  gene symbol: CSPP1
  hgvsc: ENST00000262210.5:c.951-11G>A
  variant of: http://identifiers.org/hgnc/26193
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 32855
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3771
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1171
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 863
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18012
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 920
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 528
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 174
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47919
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 368
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 243
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 527
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 921
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4479
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2090
  bin: 9.75e1
  variant carriers: 22
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: African
reference allele: G
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP

8-68015263-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68015263
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 68015263
    reference: chr 8
allele count: 41
allele frequency: 3.43878954607978e-4
allele num: 119228
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000428694
  ensembl transcript: ENST00000519163
  gene symbol: CSPP1
  hgvsc: ENST00000519163.1:c.948-9G>A
  variant of: http://identifiers.org/hgnc/26193
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000430092
  ensembl transcript: ENST00000519668
  gene symbol: CSPP1
  hgvsc: ENST00000519668.1:c.69-9G>A
  variant of: http://identifiers.org/hgnc/26193
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000415782
  ensembl transcript: ENST00000412460
  gene symbol: CSPP1
  hgvsc: ENST00000412460.1:c.69-9G>A
  variant of: http://identifiers.org/hgnc/26193
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000262210
  ensembl transcript: ENST00000262210
  gene symbol: CSPP1
  hgvsc: ENST00000262210.5:c.951-9G>A
  variant of: http://identifiers.org/hgnc/26193
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 5.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 18124
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 734
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 5.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 32979
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1021
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3805
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 4.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 867
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 4.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 886
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 322
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 910
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 291
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 463
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 316
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 917
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4489
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: ReadPosRankSum

6-146480614-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 146480614
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 146480614
    reference: chr 6
allele count: 1
allele frequency: 8.242935804015958e-6
allele num: 121316
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000282753
  ensembl transcript: ENST00000282753
  gene symbol: GRM1
  hgvsc: ENST00000282753.1:c.831C>T
  hgvsp: ENST00000282753.1:c.831C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000354896
  ensembl transcript: ENST00000361719
  gene symbol: GRM1
  hgvsc: ENST00000361719.2:c.831C>T
  hgvsp: ENST00000361719.2:c.831C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000152822
  ensembl transcript: ENST00000502405
  gene symbol: GRM1
  hgvsc: ENST00000502405.1:n.1241C>T
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000425599
  ensembl transcript: ENST00000507907
  gene symbol: GRM1
  hgvsc: ENST00000507907.1:c.831C>T
  hgvsp: ENST00000507907.1:c.831C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000424095
  ensembl transcript: ENST00000492807
  gene symbol: GRM1
  hgvsc: ENST00000492807.2:c.831C>T
  hgvsp: ENST00000492807.2:c.831C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000376119
  ensembl transcript: ENST00000392299
  gene symbol: GRM1
  hgvsc: ENST00000392299.2:c.831C>T
  hgvsp: ENST00000392299.2:c.831C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000347437
  ensembl transcript: ENST00000355289
  gene symbol: GRM1
  hgvsc: ENST00000355289.4:c.831C>T
  hgvsp: ENST00000355289.4:c.831C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000152822
  ensembl transcript: ENST00000507005
  gene symbol: GRM1
  hgvsc: ENST00000507005.1:n.1301C>T
  variant of: http://identifiers.org/hgnc/4593
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12343
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7709
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10011
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9200
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2601
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1729
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3031
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1332
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3766
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5552
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Leu277Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum

6-146480616-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 146480616
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 146480616
    reference: chr 6
allele count: 1
allele frequency: 8.242664029014178e-6
allele num: 121320
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000152822
  ensembl transcript: ENST00000502405
  gene symbol: GRM1
  hgvsc: ENST00000502405.1:n.1243G>T
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000282753
  ensembl transcript: ENST00000282753
  gene symbol: GRM1
  hgvsc: ENST00000282753.1:c.833G>T
  hgvsp: ENSP00000282753.1:p.Arg278Leu
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000376119
  ensembl transcript: ENST00000392299
  gene symbol: GRM1
  hgvsc: ENST00000392299.2:c.833G>T
  hgvsp: ENSP00000376119.2:p.Arg278Leu
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000424095
  ensembl transcript: ENST00000492807
  gene symbol: GRM1
  hgvsc: ENST00000492807.2:c.833G>T
  hgvsp: ENSP00000424095.1:p.Arg278Leu
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000152822
  ensembl transcript: ENST00000507005
  gene symbol: GRM1
  hgvsc: ENST00000507005.1:n.1303G>T
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000425599
  ensembl transcript: ENST00000507907
  gene symbol: GRM1
  hgvsc: ENST00000507907.1:c.833G>T
  hgvsp: ENSP00000425599.1:p.Arg278Leu
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000347437
  ensembl transcript: ENST00000355289
  gene symbol: GRM1
  hgvsc: ENST00000355289.4:c.833G>T
  hgvsp: ENSP00000347437.4:p.Arg278Leu
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000354896
  ensembl transcript: ENST00000361719
  gene symbol: GRM1
  hgvsc: ENST00000361719.2:c.833G>T
  hgvsp: ENSP00000354896.2:p.Arg278Leu
  variant of: http://identifiers.org/hgnc/4593
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1728
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2601
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3764
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9202
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7707
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1331
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12349
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5556
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10006
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 952
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3042
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26464
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1411
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Arg278Leu
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: G
site quality: MQ
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum

http://identifiers.org/exac.variant/6-146480624-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 146480624
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 146480624
    reference: chr 6
allele count: 1
allele frequency: 8.243207596940122e-6
allele num: 121312
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000152822
  ensembl transcript: ENST00000502405
  gene symbol: GRM1
  hgvsc: ENST00000502405.1:n.1251C>A
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000354896
  ensembl transcript: ENST00000361719
  gene symbol: GRM1
  hgvsc: ENST00000361719.2:c.841C>A
  hgvsp: ENSP00000354896.2:p.Leu281Ile
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000425599
  ensembl transcript: ENST00000507907
  gene symbol: GRM1
  hgvsc: ENST00000507907.1:c.841C>A
  hgvsp: ENSP00000425599.1:p.Leu281Ile
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000152822
  ensembl transcript: ENST00000507005
  gene symbol: GRM1
  hgvsc: ENST00000507005.1:n.1311C>A
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000376119
  ensembl transcript: ENST00000392299
  gene symbol: GRM1
  hgvsc: ENST00000392299.2:c.841C>A
  hgvsp: ENSP00000376119.2:p.Leu281Ile
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000347437
  ensembl transcript: ENST00000355289
  gene symbol: GRM1
  hgvsc: ENST00000355289.4:c.841C>A
  hgvsp: ENSP00000347437.4:p.Leu281Ile
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000282753
  ensembl transcript: ENST00000282753
  gene symbol: GRM1
  hgvsc: ENST00000282753.1:c.841C>A
  hgvsp: ENSP00000282753.1:p.Leu281Ile
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000424095
  ensembl transcript: ENST00000492807
  gene symbol: GRM1
  hgvsc: ENST00000492807.2:c.841C>A
  hgvsp: ENSP00000424095.1:p.Leu281Ile
  variant of: http://identifiers.org/hgnc/4593
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2598
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9200
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12312
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7690
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 952
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1725
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1331
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9997
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3764
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3093
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5553
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11065
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3735
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8225
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 26489
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Leu281Ile
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP

6-146480630-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 146480630
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 146480630
    reference: chr 6
allele count: 1
allele frequency: 8.242935804015958e-6
allele num: 121316
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000425599
  ensembl transcript: ENST00000507907
  gene symbol: GRM1
  hgvsc: ENST00000507907.1:c.847A>G
  hgvsp: ENSP00000425599.1:p.Lys283Glu
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000282753
  ensembl transcript: ENST00000282753
  gene symbol: GRM1
  hgvsc: ENST00000282753.1:c.847A>G
  hgvsp: ENSP00000282753.1:p.Lys283Glu
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000376119
  ensembl transcript: ENST00000392299
  gene symbol: GRM1
  hgvsc: ENST00000392299.2:c.847A>G
  hgvsp: ENSP00000376119.2:p.Lys283Glu
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000354896
  ensembl transcript: ENST00000361719
  gene symbol: GRM1
  hgvsc: ENST00000361719.2:c.847A>G
  hgvsp: ENSP00000354896.2:p.Lys283Glu
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000152822
  ensembl transcript: ENST00000507005
  gene symbol: GRM1
  hgvsc: ENST00000507005.1:n.1317A>G
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000347437
  ensembl transcript: ENST00000355289
  gene symbol: GRM1
  hgvsc: ENST00000355289.4:c.847A>G
  hgvsp: ENSP00000347437.4:p.Lys283Glu
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000424095
  ensembl transcript: ENST00000492807
  gene symbol: GRM1
  hgvsc: ENST00000492807.2:c.847A>G
  hgvsp: ENSP00000424095.1:p.Lys283Glu
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000152822
  ensembl transcript: ENST00000502405
  gene symbol: GRM1
  hgvsc: ENST00000502405.1:n.1257A>G
  variant of: http://identifiers.org/hgnc/4593
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 3136
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3759
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7678
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1726
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9260
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9958
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2592
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1331
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12304
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5540
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11070
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1915
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26581
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Lys283Glu
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum

6-146480632-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 146480632
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 146480632
    reference: chr 6
allele count: 1
allele frequency: 8.242256400112095e-6
allele num: 121326
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000424095
  ensembl transcript: ENST00000492807
  gene symbol: GRM1
  hgvsc: ENST00000492807.2:c.849G>A
  hgvsp: ENST00000492807.2:c.849G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000152822
  ensembl transcript: ENST00000502405
  gene symbol: GRM1
  hgvsc: ENST00000502405.1:n.1259G>A
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000347437
  ensembl transcript: ENST00000355289
  gene symbol: GRM1
  hgvsc: ENST00000355289.4:c.849G>A
  hgvsp: ENST00000355289.4:c.849G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000425599
  ensembl transcript: ENST00000507907
  gene symbol: GRM1
  hgvsc: ENST00000507907.1:c.849G>A
  hgvsp: ENST00000507907.1:c.849G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000376119
  ensembl transcript: ENST00000392299
  gene symbol: GRM1
  hgvsc: ENST00000392299.2:c.849G>A
  hgvsp: ENST00000392299.2:c.849G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000282753
  ensembl transcript: ENST00000282753
  gene symbol: GRM1
  hgvsc: ENST00000282753.1:c.849G>A
  hgvsp: ENST00000282753.1:c.849G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000354896
  ensembl transcript: ENST00000361719
  gene symbol: GRM1
  hgvsc: ENST00000361719.2:c.849G>A
  hgvsp: ENST00000361719.2:c.849G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000152822
  ensembl transcript: ENST00000507005
  gene symbol: GRM1
  hgvsc: ENST00000507005.1:n.1319G>A
  variant of: http://identifiers.org/hgnc/4593
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5539
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1725
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3759
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1331
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12292
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2592
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3159
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9254
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7674
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9954
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1916
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Lys283Lys
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: South Asian
reference allele: G
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD

6-146480637-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 146480637
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 146480637
    reference: chr 6
allele count: 70
allele frequency: 5.770245317858085e-4
allele num: 121312
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000424095
  ensembl transcript: ENST00000492807
  gene symbol: GRM1
  hgvsc: ENST00000492807.2:c.854G>A
  hgvsp: ENSP00000424095.1:p.Arg285Lys
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000152822
  ensembl transcript: ENST00000502405
  gene symbol: GRM1
  hgvsc: ENST00000502405.1:n.1264G>A
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000282753
  ensembl transcript: ENST00000282753
  gene symbol: GRM1
  hgvsc: ENST00000282753.1:c.854G>A
  hgvsp: ENSP00000282753.1:p.Arg285Lys
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000354896
  ensembl transcript: ENST00000361719
  gene symbol: GRM1
  hgvsc: ENST00000361719.2:c.854G>A
  hgvsp: ENSP00000354896.2:p.Arg285Lys
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000376119
  ensembl transcript: ENST00000392299
  gene symbol: GRM1
  hgvsc: ENST00000392299.2:c.854G>A
  hgvsp: ENSP00000376119.2:p.Arg285Lys
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000347437
  ensembl transcript: ENST00000355289
  gene symbol: GRM1
  hgvsc: ENST00000355289.4:c.854G>A
  hgvsp: ENSP00000347437.4:p.Arg285Lys
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000425599
  ensembl transcript: ENST00000507907
  gene symbol: GRM1
  hgvsc: ENST00000507907.1:c.854G>A
  hgvsp: ENSP00000425599.1:p.Arg285Lys
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000152822
  ensembl transcript: ENST00000507005
  gene symbol: GRM1
  hgvsc: ENST00000507005.1:n.1324G>A
  variant of: http://identifiers.org/hgnc/4593
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9944
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 8.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2592
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 955
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3752
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 9.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 9260
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 9.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5536
  bin: 4.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 1730
  bin: 6.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3183
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12267
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1331
  bin: 6.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 7673
  bin: 4.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11067
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8239
  bin: 9.75e1
  variant carriers: 70
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Arg285Lys
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ

6-146480653-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 146480653
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 146480653
    reference: chr 6
allele count: 1
allele frequency: 8.243615319934711e-6
allele num: 121306
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000424095
  ensembl transcript: ENST00000492807
  gene symbol: GRM1
  hgvsc: ENST00000492807.2:c.870C>T
  hgvsp: ENST00000492807.2:c.870C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000152822
  ensembl transcript: ENST00000502405
  gene symbol: GRM1
  hgvsc: ENST00000502405.1:n.1280C>T
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000354896
  ensembl transcript: ENST00000361719
  gene symbol: GRM1
  hgvsc: ENST00000361719.2:c.870C>T
  hgvsp: ENST00000361719.2:c.870C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000425599
  ensembl transcript: ENST00000507907
  gene symbol: GRM1
  hgvsc: ENST00000507907.1:c.870C>T
  hgvsp: ENST00000507907.1:c.870C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000282753
  ensembl transcript: ENST00000282753
  gene symbol: GRM1
  hgvsc: ENST00000282753.1:c.870C>T
  hgvsp: ENST00000282753.1:c.870C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000376119
  ensembl transcript: ENST00000392299
  gene symbol: GRM1
  hgvsc: ENST00000392299.2:c.870C>T
  hgvsp: ENST00000392299.2:c.870C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000347437
  ensembl transcript: ENST00000355289
  gene symbol: GRM1
  hgvsc: ENST00000355289.4:c.870C>T
  hgvsp: ENST00000355289.4:c.870C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000152822
  ensembl transcript: ENST00000507005
  gene symbol: GRM1
  hgvsc: ENST00000507005.1:n.1340C>T
  variant of: http://identifiers.org/hgnc/4593
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12263
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7676
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1325
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3244
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1725
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3752
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9286
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9940
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2590
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5527
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1390
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26779
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Phe290Phe
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: Other
reference allele: C
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum

8-68015271-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68015271
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 68015271
    reference: chr 8
allele count: 1
allele frequency: 8.358688020328329e-6
allele num: 119636
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000415782
  ensembl transcript: ENST00000412460
  gene symbol: CSPP1
  hgvsc: ENST00000412460.1:c.69-1G>C
  variant of: http://identifiers.org/hgnc/26193
annotation: Annotation
  canonical: true
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000262210
  ensembl transcript: ENST00000262210
  gene symbol: CSPP1
  hgvsc: ENST00000262210.5:c.951-1G>C
  variant of: http://identifiers.org/hgnc/26193
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000430092
  ensembl transcript: ENST00000519668
  gene symbol: CSPP1
  hgvsc: ENST00000519668.1:c.69-1G>C
  variant of: http://identifiers.org/hgnc/26193
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000428694
  ensembl transcript: ENST00000519163
  gene symbol: CSPP1
  hgvsc: ENST00000519163.1:c.948-1G>C
  variant of: http://identifiers.org/hgnc/26193
canonical: true
consequence: splice acceptor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18475
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33457
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3854
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 868
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 226
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49177
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 913
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 180
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 653
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 205
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2068
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 523
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 324
  bin: 9.25e1
  variant carriers: 0
hgvs: c.951-1G>C
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: MQ

8-68015274-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68015274
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 68015274
    reference: chr 8
allele count: 1
allele frequency: 8.343763037129745e-6
allele num: 119850
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000430092
  ensembl transcript: ENST00000519668
  gene symbol: CSPP1
  hgvsc: ENST00000519668.1:c.71T>C
  hgvsp: ENSP00000430092.1:p.Met24Thr
  variant of: http://identifiers.org/hgnc/26193
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000262210
  ensembl transcript: ENST00000262210
  gene symbol: CSPP1
  hgvsc: ENST00000262210.5:c.953T>C
  hgvsp: ENSP00000262210.5:p.Met318Thr
  variant of: http://identifiers.org/hgnc/26193
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000415782
  ensembl transcript: ENST00000412460
  gene symbol: CSPP1
  hgvsc: ENST00000412460.1:c.71T>C
  hgvsp: ENSP00000415782.1:p.Met24Thr
  variant of: http://identifiers.org/hgnc/26193
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000428694
  ensembl transcript: ENST00000519163
  gene symbol: CSPP1
  hgvsc: ENST00000519163.1:c.950T>C
  hgvsp: ENSP00000428694.1:p.Met317Thr
  variant of: http://identifiers.org/hgnc/26193
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 863
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18598
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33610
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3847
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 929
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49590
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4588
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 542
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 526
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 925
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Met318Thr
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
population: South Asian
reference allele: T
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: InbreedingCoeff

8-68015277-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 68015277
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 68015277
    reference: chr 8
allele count: 4
allele frequency: 3.335112059765208e-5
allele num: 119936
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000428694
  ensembl transcript: ENST00000519163
  gene symbol: CSPP1
  hgvsc: ENST00000519163.1:c.953A>G
  hgvsp: ENSP00000428694.1:p.His318Arg
  variant of: http://identifiers.org/hgnc/26193
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000262210
  ensembl transcript: ENST00000262210
  gene symbol: CSPP1
  hgvsc: ENST00000262210.5:c.956A>G
  hgvsp: ENSP00000262210.5:p.His319Arg
  variant of: http://identifiers.org/hgnc/26193
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000430092
  ensembl transcript: ENST00000519668
  gene symbol: CSPP1
  hgvsc: ENST00000519668.1:c.74A>G
  hgvsp: ENSP00000430092.1:p.His25Arg
  variant of: http://identifiers.org/hgnc/26193
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000104218
  ensembl protein: ENSP00000415782
  ensembl transcript: ENST00000412460
  gene symbol: CSPP1
  hgvsc: ENST00000412460.1:c.74A>G
  hgvsp: ENSP00000415782.1:p.His25Arg
  variant of: http://identifiers.org/hgnc/26193
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 33620
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 367
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3854
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18708
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 865
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 928
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4586
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 488
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 927
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 325
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 208
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 4.75e1
  variant carriers: 0
hgvs: p.His319Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
population: African
population: South Asian
population: European (Finnish)
reference allele: A
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP

6-146480663-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 146480663
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 146480663
    reference: chr 6
allele count: 1
allele frequency: 8.245110649384915e-6
allele num: 121284
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000347437
  ensembl transcript: ENST00000355289
  gene symbol: GRM1
  hgvsc: ENST00000355289.4:c.880A>G
  hgvsp: ENSP00000347437.4:p.Met294Val
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000425599
  ensembl transcript: ENST00000507907
  gene symbol: GRM1
  hgvsc: ENST00000507907.1:c.880A>G
  hgvsp: ENSP00000425599.1:p.Met294Val
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000424095
  ensembl transcript: ENST00000492807
  gene symbol: GRM1
  hgvsc: ENST00000492807.2:c.880A>G
  hgvsp: ENSP00000424095.1:p.Met294Val
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000376119
  ensembl transcript: ENST00000392299
  gene symbol: GRM1
  hgvsc: ENST00000392299.2:c.880A>G
  hgvsp: ENSP00000376119.2:p.Met294Val
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000282753
  ensembl transcript: ENST00000282753
  gene symbol: GRM1
  hgvsc: ENST00000282753.1:c.880A>G
  hgvsp: ENSP00000282753.1:p.Met294Val
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000354896
  ensembl transcript: ENST00000361719
  gene symbol: GRM1
  hgvsc: ENST00000361719.2:c.880A>G
  hgvsp: ENSP00000354896.2:p.Met294Val
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000152822
  ensembl transcript: ENST00000507005
  gene symbol: GRM1
  hgvsc: ENST00000507005.1:n.1350A>G
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000152822
  ensembl transcript: ENST00000502405
  gene symbol: GRM1
  hgvsc: ENST00000502405.1:n.1290A>G
  variant of: http://identifiers.org/hgnc/4593
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3752
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3255
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7674
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1725
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9279
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2590
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1325
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5527
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9934
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12255
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2962
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8173
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Met294Val
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD

http://identifiers.org/exac.variant/6-146480672-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 146480672
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 146480672
    reference: chr 6
allele count: 2
allele frequency: 1.649430121892886e-5
allele num: 121254
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000354896
  ensembl transcript: ENST00000361719
  gene symbol: GRM1
  hgvsc: ENST00000361719.2:c.889C>A
  hgvsp: ENST00000361719.2:c.889C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000424095
  ensembl transcript: ENST00000492807
  gene symbol: GRM1
  hgvsc: ENST00000492807.2:c.889C>A
  hgvsp: ENST00000492807.2:c.889C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000425599
  ensembl transcript: ENST00000507907
  gene symbol: GRM1
  hgvsc: ENST00000507907.1:c.889C>A
  hgvsp: ENST00000507907.1:c.889C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000282753
  ensembl transcript: ENST00000282753
  gene symbol: GRM1
  hgvsc: ENST00000282753.1:c.889C>A
  hgvsp: ENST00000282753.1:c.889C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000152822
  ensembl transcript: ENST00000502405
  gene symbol: GRM1
  hgvsc: ENST00000502405.1:n.1299C>A
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000376119
  ensembl transcript: ENST00000392299
  gene symbol: GRM1
  hgvsc: ENST00000392299.2:c.889C>A
  hgvsp: ENST00000392299.2:c.889C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000347437
  ensembl transcript: ENST00000355289
  gene symbol: GRM1
  hgvsc: ENST00000355289.4:c.889C>A
  hgvsp: ENST00000355289.4:c.889C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000152822
  ensembl transcript: ENST00000507005
  gene symbol: GRM1
  hgvsc: ENST00000507005.1:n.1359C>A
  variant of: http://identifiers.org/hgnc/4593
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 952
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9256
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7675
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12245
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1725
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9932
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3753
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2589
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5528
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3248
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1326
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26809
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11048
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3724
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1909
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Arg297Arg
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: Other
reference allele: C
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum

6-146480681-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 146480681
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 146480681
    reference: chr 6
allele count: 5
allele frequency: 4.124459695779853e-5
allele num: 121228
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000354896
  ensembl transcript: ENST00000361719
  gene symbol: GRM1
  hgvsc: ENST00000361719.2:c.898C>T
  hgvsp: ENST00000361719.2:c.898C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000282753
  ensembl transcript: ENST00000282753
  gene symbol: GRM1
  hgvsc: ENST00000282753.1:c.898C>T
  hgvsp: ENST00000282753.1:c.898C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000424095
  ensembl transcript: ENST00000492807
  gene symbol: GRM1
  hgvsc: ENST00000492807.2:c.898C>T
  hgvsp: ENST00000492807.2:c.898C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000376119
  ensembl transcript: ENST00000392299
  gene symbol: GRM1
  hgvsc: ENST00000392299.2:c.898C>T
  hgvsp: ENST00000392299.2:c.898C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000347437
  ensembl transcript: ENST00000355289
  gene symbol: GRM1
  hgvsc: ENST00000355289.4:c.898C>T
  hgvsp: ENST00000355289.4:c.898C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000152822
  ensembl transcript: ENST00000502405
  gene symbol: GRM1
  hgvsc: ENST00000502405.1:n.1308C>T
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000425599
  ensembl transcript: ENST00000507907
  gene symbol: GRM1
  hgvsc: ENST00000507907.1:c.898C>T
  hgvsp: ENST00000507907.1:c.898C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000152822
  ensembl transcript: ENST00000507005
  gene symbol: GRM1
  hgvsc: ENST00000507005.1:n.1368C>T
  variant of: http://identifiers.org/hgnc/4593
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5525
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3207
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12237
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3751
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9930
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1725
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1326
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 952
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2588
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7676
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9237
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8171
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4399
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2959
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Leu300Leu
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD

6-146480684-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 146480684
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 146480684
    reference: chr 6
allele count: 1
allele frequency: 8.251233559417133e-6
allele num: 121194
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000425599
  ensembl transcript: ENST00000507907
  gene symbol: GRM1
  hgvsc: ENST00000507907.1:c.901A>G
  hgvsp: ENSP00000425599.1:p.Ser301Gly
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000376119
  ensembl transcript: ENST00000392299
  gene symbol: GRM1
  hgvsc: ENST00000392299.2:c.901A>G
  hgvsp: ENSP00000376119.2:p.Ser301Gly
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000354896
  ensembl transcript: ENST00000361719
  gene symbol: GRM1
  hgvsc: ENST00000361719.2:c.901A>G
  hgvsp: ENSP00000354896.2:p.Ser301Gly
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000152822
  ensembl transcript: ENST00000502405
  gene symbol: GRM1
  hgvsc: ENST00000502405.1:n.1311A>G
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000152822
  ensembl transcript: ENST00000507005
  gene symbol: GRM1
  hgvsc: ENST00000507005.1:n.1371A>G
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000282753
  ensembl transcript: ENST00000282753
  gene symbol: GRM1
  hgvsc: ENST00000282753.1:c.901A>G
  hgvsp: ENSP00000282753.1:p.Ser301Gly
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000424095
  ensembl transcript: ENST00000492807
  gene symbol: GRM1
  hgvsc: ENST00000492807.2:c.901A>G
  hgvsp: ENSP00000424095.1:p.Ser301Gly
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000347437
  ensembl transcript: ENST00000355289
  gene symbol: GRM1
  hgvsc: ENST00000355289.4:c.901A>G
  hgvsp: ENSP00000347437.4:p.Ser301Gly
  variant of: http://identifiers.org/hgnc/4593
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3164
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12232
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7675
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3750
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9220
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2588
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1326
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5526
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1724
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9927
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26720
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1386
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4399
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 253
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11023
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8166
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Ser301Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
population: Other
population: Latino
population: European (Finnish)
reference allele: A
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum

6-146480693-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 146480693
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 146480693
    reference: chr 6
allele count: 1
allele frequency: 8.257501940512956e-6
allele num: 121102
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000152822
  ensembl transcript: ENST00000507005
  gene symbol: GRM1
  hgvsc: ENST00000507005.1:n.1380C>T
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000425599
  ensembl transcript: ENST00000507907
  gene symbol: GRM1
  hgvsc: ENST00000507907.1:c.910C>T
  hgvsp: ENSP00000425599.1:p.Arg304Trp
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000376119
  ensembl transcript: ENST00000392299
  gene symbol: GRM1
  hgvsc: ENST00000392299.2:c.910C>T
  hgvsp: ENSP00000376119.2:p.Arg304Trp
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000424095
  ensembl transcript: ENST00000492807
  gene symbol: GRM1
  hgvsc: ENST00000492807.2:c.910C>T
  hgvsp: ENSP00000424095.1:p.Arg304Trp
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000152822
  ensembl transcript: ENST00000502405
  gene symbol: GRM1
  hgvsc: ENST00000502405.1:n.1320C>T
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000347437
  ensembl transcript: ENST00000355289
  gene symbol: GRM1
  hgvsc: ENST00000355289.4:c.910C>T
  hgvsp: ENSP00000347437.4:p.Arg304Trp
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000354896
  ensembl transcript: ENST00000361719
  gene symbol: GRM1
  hgvsc: ENST00000361719.2:c.910C>T
  hgvsp: ENSP00000354896.2:p.Arg304Trp
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000282753
  ensembl transcript: ENST00000282753
  gene symbol: GRM1
  hgvsc: ENST00000282753.1:c.910C>T
  hgvsp: ENSP00000282753.1:p.Arg304Trp
  variant of: http://identifiers.org/hgnc/4593
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1725
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12192
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3059
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9922
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3749
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 952
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2590
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5532
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7675
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9105
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1325
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1376
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4385
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Arg304Trp
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: Latino
population: East Asian
population: South Asian
reference allele: C
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD

6-146480694-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 146480694
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 146480694
    reference: chr 6
allele count: 2
allele frequency: 1.651664051531918e-5
allele num: 121090
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000282753
  ensembl transcript: ENST00000282753
  gene symbol: GRM1
  hgvsc: ENST00000282753.1:c.911G>A
  hgvsp: ENSP00000282753.1:p.Arg304Gln
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000425599
  ensembl transcript: ENST00000507907
  gene symbol: GRM1
  hgvsc: ENST00000507907.1:c.911G>A
  hgvsp: ENSP00000425599.1:p.Arg304Gln
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000424095
  ensembl transcript: ENST00000492807
  gene symbol: GRM1
  hgvsc: ENST00000492807.2:c.911G>A
  hgvsp: ENSP00000424095.1:p.Arg304Gln
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000152822
  ensembl transcript: ENST00000507005
  gene symbol: GRM1
  hgvsc: ENST00000507005.1:n.1381G>A
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000376119
  ensembl transcript: ENST00000392299
  gene symbol: GRM1
  hgvsc: ENST00000392299.2:c.911G>A
  hgvsp: ENSP00000376119.2:p.Arg304Gln
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000347437
  ensembl transcript: ENST00000355289
  gene symbol: GRM1
  hgvsc: ENST00000355289.4:c.911G>A
  hgvsp: ENSP00000347437.4:p.Arg304Gln
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000354896
  ensembl transcript: ENST00000361719
  gene symbol: GRM1
  hgvsc: ENST00000361719.2:c.911G>A
  hgvsp: ENSP00000354896.2:p.Arg304Gln
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000152822
  ensembl transcript: ENST00000502405
  gene symbol: GRM1
  hgvsc: ENST00000502405.1:n.1321G>A
  variant of: http://identifiers.org/hgnc/4593
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3746
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5520
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12172
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9908
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2588
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9096
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3036
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7660
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1722
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1324
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1897
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8145
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 10903
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 498
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Arg304Gln
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
reference allele: G
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/6-146480704-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 146480704
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 146480704
    reference: chr 6
allele count: 1
allele frequency: 8.265009256810368e-6
allele num: 120992
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000425599
  ensembl transcript: ENST00000507907
  gene symbol: GRM1
  hgvsc: ENST00000507907.1:c.921C>A
  hgvsp: ENST00000507907.1:c.921C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000347437
  ensembl transcript: ENST00000355289
  gene symbol: GRM1
  hgvsc: ENST00000355289.4:c.921C>A
  hgvsp: ENST00000355289.4:c.921C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000354896
  ensembl transcript: ENST00000361719
  gene symbol: GRM1
  hgvsc: ENST00000361719.2:c.921C>A
  hgvsp: ENST00000361719.2:c.921C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000282753
  ensembl transcript: ENST00000282753
  gene symbol: GRM1
  hgvsc: ENST00000282753.1:c.921C>A
  hgvsp: ENST00000282753.1:c.921C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000152822
  ensembl transcript: ENST00000502405
  gene symbol: GRM1
  hgvsc: ENST00000502405.1:n.1331C>A
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000152822
  ensembl transcript: ENST00000507005
  gene symbol: GRM1
  hgvsc: ENST00000507005.1:n.1391C>A
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000376119
  ensembl transcript: ENST00000392299
  gene symbol: GRM1
  hgvsc: ENST00000392299.2:c.921C>A
  hgvsp: ENST00000392299.2:c.921C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000424095
  ensembl transcript: ENST00000492807
  gene symbol: GRM1
  hgvsc: ENST00000492807.2:c.921C>A
  hgvsp: ENST00000492807.2:c.921C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4593
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5520
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1723
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9883
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8831
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12031
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3744
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7654
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 779
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2586
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2850
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1326
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25907
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10779
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1373
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8139
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 914
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Gly307Gly
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum

6-146480704-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 146480704
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 146480704
    reference: chr 6
allele count: 3
allele frequency: 2.47950277704311e-5
allele num: 120992
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000424095
  ensembl transcript: ENST00000492807
  gene symbol: GRM1
  hgvsc: ENST00000492807.2:c.921C>G
  hgvsp: ENST00000492807.2:c.921C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000282753
  ensembl transcript: ENST00000282753
  gene symbol: GRM1
  hgvsc: ENST00000282753.1:c.921C>G
  hgvsp: ENST00000282753.1:c.921C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000425599
  ensembl transcript: ENST00000507907
  gene symbol: GRM1
  hgvsc: ENST00000507907.1:c.921C>G
  hgvsp: ENST00000507907.1:c.921C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000347437
  ensembl transcript: ENST00000355289
  gene symbol: GRM1
  hgvsc: ENST00000355289.4:c.921C>G
  hgvsp: ENST00000355289.4:c.921C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000376119
  ensembl transcript: ENST00000392299
  gene symbol: GRM1
  hgvsc: ENST00000392299.2:c.921C>G
  hgvsp: ENST00000392299.2:c.921C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000354896
  ensembl transcript: ENST00000361719
  gene symbol: GRM1
  hgvsc: ENST00000361719.2:c.921C>G
  hgvsp: ENST00000361719.2:c.921C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000152822
  ensembl transcript: ENST00000507005
  gene symbol: GRM1
  hgvsc: ENST00000507005.1:n.1391C>G
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000152822
  ensembl transcript: ENST00000502405
  gene symbol: GRM1
  hgvsc: ENST00000502405.1:n.1331C>G
  variant of: http://identifiers.org/hgnc/4593
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12031
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 779
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1723
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2586
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2850
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7654
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3744
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5520
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8831
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1326
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9883
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 914
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4353
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1888
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 150
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Gly307Gly
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum

6-146480704-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 146480704
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 146480704
    reference: chr 6
allele count: 3
allele frequency: 2.47950277704311e-5
allele num: 120992
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000424095
  ensembl transcript: ENST00000492807
  gene symbol: GRM1
  hgvsc: ENST00000492807.2:c.921C>T
  hgvsp: ENST00000492807.2:c.921C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000152822
  ensembl transcript: ENST00000507005
  gene symbol: GRM1
  hgvsc: ENST00000507005.1:n.1391C>T
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000282753
  ensembl transcript: ENST00000282753
  gene symbol: GRM1
  hgvsc: ENST00000282753.1:c.921C>T
  hgvsp: ENST00000282753.1:c.921C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000354896
  ensembl transcript: ENST00000361719
  gene symbol: GRM1
  hgvsc: ENST00000361719.2:c.921C>T
  hgvsp: ENST00000361719.2:c.921C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000376119
  ensembl transcript: ENST00000392299
  gene symbol: GRM1
  hgvsc: ENST00000392299.2:c.921C>T
  hgvsp: ENST00000392299.2:c.921C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000347437
  ensembl transcript: ENST00000355289
  gene symbol: GRM1
  hgvsc: ENST00000355289.4:c.921C>T
  hgvsp: ENST00000355289.4:c.921C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000425599
  ensembl transcript: ENST00000507907
  gene symbol: GRM1
  hgvsc: ENST00000507907.1:c.921C>T
  hgvsp: ENST00000507907.1:c.921C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000152822
  ensembl transcript: ENST00000502405
  gene symbol: GRM1
  hgvsc: ENST00000502405.1:n.1331C>T
  variant of: http://identifiers.org/hgnc/4593
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12031
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3744
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1326
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2850
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5520
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7654
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2586
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8831
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 779
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9883
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 618
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1723
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25907
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4353
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10779
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 914
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Gly307Gly
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
population: Latino
reference allele: C
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum

6-146480705-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 146480705
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 146480705
    reference: chr 6
allele count: 85
allele frequency: 7.025373997851062e-4
allele num: 120990
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000282753
  ensembl transcript: ENST00000282753
  gene symbol: GRM1
  hgvsc: ENST00000282753.1:c.922G>A
  hgvsp: ENSP00000282753.1:p.Val308Ile
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000376119
  ensembl transcript: ENST00000392299
  gene symbol: GRM1
  hgvsc: ENST00000392299.2:c.922G>A
  hgvsp: ENSP00000376119.2:p.Val308Ile
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000152822
  ensembl transcript: ENST00000507005
  gene symbol: GRM1
  hgvsc: ENST00000507005.1:n.1392G>A
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000354896
  ensembl transcript: ENST00000361719
  gene symbol: GRM1
  hgvsc: ENST00000361719.2:c.922G>A
  hgvsp: ENSP00000354896.2:p.Val308Ile
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000425599
  ensembl transcript: ENST00000507907
  gene symbol: GRM1
  hgvsc: ENST00000507907.1:c.922G>A
  hgvsp: ENSP00000425599.1:p.Val308Ile
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000347437
  ensembl transcript: ENST00000355289
  gene symbol: GRM1
  hgvsc: ENST00000355289.4:c.922G>A
  hgvsp: ENSP00000347437.4:p.Val308Ile
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000424095
  ensembl transcript: ENST00000492807
  gene symbol: GRM1
  hgvsc: ENST00000492807.2:c.922G>A
  hgvsp: ENSP00000424095.1:p.Val308Ile
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000152822
  ensembl transcript: ENST00000502405
  gene symbol: GRM1
  hgvsc: ENST00000502405.1:n.1332G>A
  variant of: http://identifiers.org/hgnc/4593
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8825
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 9882
  bin: 3.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 636
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 12015
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 7.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2587
  bin: 5.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 5509
  bin: 4.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 2873
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1325
  bin: 6.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1726
  bin: 6.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 8.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 3740
  bin: 5.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 7653
  bin: 4.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 8.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10778
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1887
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Val308Ile
num of homozygotes: 1
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: BaseQRankSum

6-146480708-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 146480708
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 146480708
    reference: chr 6
allele count: 1
allele frequency: 8.268426187759421e-6
allele num: 120942
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000347437
  ensembl transcript: ENST00000355289
  gene symbol: GRM1
  hgvsc: ENST00000355289.4:c.925G>A
  hgvsp: ENSP00000347437.4:p.Val309Met
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000424095
  ensembl transcript: ENST00000492807
  gene symbol: GRM1
  hgvsc: ENST00000492807.2:c.925G>A
  hgvsp: ENSP00000424095.1:p.Val309Met
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000425599
  ensembl transcript: ENST00000507907
  gene symbol: GRM1
  hgvsc: ENST00000507907.1:c.925G>A
  hgvsp: ENSP00000425599.1:p.Val309Met
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000354896
  ensembl transcript: ENST00000361719
  gene symbol: GRM1
  hgvsc: ENST00000361719.2:c.925G>A
  hgvsp: ENSP00000354896.2:p.Val309Met
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000152822
  ensembl transcript: ENST00000502405
  gene symbol: GRM1
  hgvsc: ENST00000502405.1:n.1335G>A
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000376119
  ensembl transcript: ENST00000392299
  gene symbol: GRM1
  hgvsc: ENST00000392299.2:c.925G>A
  hgvsp: ENSP00000376119.2:p.Val309Met
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000152822
  ensembl transcript: ENST00000507005
  gene symbol: GRM1
  hgvsc: ENST00000507005.1:n.1395G>A
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000282753
  ensembl transcript: ENST00000282753
  gene symbol: GRM1
  hgvsc: ENST00000282753.1:c.925G>A
  hgvsp: ENSP00000282753.1:p.Val309Met
  variant of: http://identifiers.org/hgnc/4593
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8763
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2830
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3731
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 946
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9865
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1722
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7653
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11990
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5506
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1321
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2579
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 882
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3629
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25862
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Val309Met
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: South Asian
reference allele: G
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS

6-146480713-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 146480713
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 146480713
    reference: chr 6
allele count: 20
allele frequency: 1.654971534489607e-4
allele num: 120848
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000152822
  ensembl transcript: ENST00000502405
  gene symbol: GRM1
  hgvsc: ENST00000502405.1:n.1340C>T
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000152822
  ensembl transcript: ENST00000507005
  gene symbol: GRM1
  hgvsc: ENST00000507005.1:n.1400C>T
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000347437
  ensembl transcript: ENST00000355289
  gene symbol: GRM1
  hgvsc: ENST00000355289.4:c.930C>T
  hgvsp: ENST00000355289.4:c.930C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000425599
  ensembl transcript: ENST00000507907
  gene symbol: GRM1
  hgvsc: ENST00000507907.1:c.930C>T
  hgvsp: ENST00000507907.1:c.930C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000354896
  ensembl transcript: ENST00000361719
  gene symbol: GRM1
  hgvsc: ENST00000361719.2:c.930C>T
  hgvsp: ENST00000361719.2:c.930C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000282753
  ensembl transcript: ENST00000282753
  gene symbol: GRM1
  hgvsc: ENST00000282753.1:c.930C>T
  hgvsp: ENST00000282753.1:c.930C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000376119
  ensembl transcript: ENST00000392299
  gene symbol: GRM1
  hgvsc: ENST00000392299.2:c.930C>T
  hgvsp: ENST00000392299.2:c.930C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000424095
  ensembl transcript: ENST00000492807
  gene symbol: GRM1
  hgvsc: ENST00000492807.2:c.930C>T
  hgvsp: ENST00000492807.2:c.930C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4593
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1123
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1719
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3727
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 8472
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7652
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2756
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 9844
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1318
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5508
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2580
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 945
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11874
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 246
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2910
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8053
  bin: 9.75e1
  variant carriers: 19
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25375
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1360
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Gly310Gly
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: Other
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD

6-146480714-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 146480714
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 146480714
    reference: chr 6
allele count: 2
allele frequency: 1.65461555007694e-5
allele num: 120874
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000282753
  ensembl transcript: ENST00000282753
  gene symbol: GRM1
  hgvsc: ENST00000282753.1:c.931G>A
  hgvsp: ENSP00000282753.1:p.Glu311Lys
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000152822
  ensembl transcript: ENST00000502405
  gene symbol: GRM1
  hgvsc: ENST00000502405.1:n.1341G>A
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000425599
  ensembl transcript: ENST00000507907
  gene symbol: GRM1
  hgvsc: ENST00000507907.1:c.931G>A
  hgvsp: ENSP00000425599.1:p.Glu311Lys
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000354896
  ensembl transcript: ENST00000361719
  gene symbol: GRM1
  hgvsc: ENST00000361719.2:c.931G>A
  hgvsp: ENSP00000354896.2:p.Glu311Lys
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000152822
  ensembl transcript: ENST00000507005
  gene symbol: GRM1
  hgvsc: ENST00000507005.1:n.1401G>A
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000376119
  ensembl transcript: ENST00000392299
  gene symbol: GRM1
  hgvsc: ENST00000392299.2:c.931G>A
  hgvsp: ENSP00000376119.2:p.Glu311Lys
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000347437
  ensembl transcript: ENST00000355289
  gene symbol: GRM1
  hgvsc: ENST00000355289.4:c.931G>A
  hgvsp: ENSP00000347437.4:p.Glu311Lys
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000424095
  ensembl transcript: ENST00000492807
  gene symbol: GRM1
  hgvsc: ENST00000492807.2:c.931G>A
  hgvsp: ENSP00000424095.1:p.Glu311Lys
  variant of: http://identifiers.org/hgnc/4593
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8488
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 731
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7647
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5500
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11852
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2574
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1316
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1719
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 945
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2779
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3727
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9843
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8037
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 299
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10678
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2907
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Glu311Lys
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum

6-146480738-G-GTT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 146480738
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 146480740
    reference: chr 6
allele count: 1
allele frequency: 8.904085194287139e-6
allele num: 112308
alternate allele: GTT
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000425599
  ensembl transcript: ENST00000507907
  gene symbol: GRM1
  hgvsc: ENST00000507907.1:c.950+7_950+8dupTT
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000424095
  ensembl transcript: ENST00000492807
  gene symbol: GRM1
  hgvsc: ENST00000492807.2:c.950+7_950+8dupTT
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000282753
  ensembl transcript: ENST00000282753
  gene symbol: GRM1
  hgvsc: ENST00000282753.1:c.950+7_950+8dupTT
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000152822
  ensembl transcript: ENST00000507005
  gene symbol: GRM1
  hgvsc: ENST00000507005.1:n.1427_1428dupTT
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000354896
  ensembl transcript: ENST00000361719
  gene symbol: GRM1
  hgvsc: ENST00000361719.2:c.950+7_950+8dupTT
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000376119
  ensembl transcript: ENST00000392299
  gene symbol: GRM1
  hgvsc: ENST00000392299.2:c.950+7_950+8dupTT
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000347437
  ensembl transcript: ENST00000355289
  gene symbol: GRM1
  hgvsc: ENST00000355289.4:c.950+7_950+8dupTT
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000152822
  ensembl transcript: ENST00000502405
  gene symbol: GRM1
  hgvsc: ENST00000502405.1:n.1367_1368dupTT
  variant of: http://identifiers.org/hgnc/4593
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4653
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7993
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6620
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8583
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1587
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8988
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2258
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3635
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6530
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1666
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1257
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3191
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2686
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 680
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1809
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6288
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5181
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2982
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 845
  bin: 8.75e1
  variant carriers: 0
hgvs: c.950+7_950+8dupTT
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum

6-146480740-TTC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 146480740
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 146480738
    reference: chr 6
allele count: 12401
allele frequency: 2.148475398475398e-1
allele num: 57720
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000347437
  ensembl transcript: ENST00000355289
  gene symbol: GRM1
  hgvsc: ENST00000355289.4:c.950+44_950+45delTC
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000354896
  ensembl transcript: ENST00000361719
  gene symbol: GRM1
  hgvsc: ENST00000361719.2:c.950+44_950+45delTC
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000376119
  ensembl transcript: ENST00000392299
  gene symbol: GRM1
  hgvsc: ENST00000392299.2:c.950+44_950+45delTC
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000152822
  ensembl transcript: ENST00000502405
  gene symbol: GRM1
  hgvsc: ENST00000502405.1:n.1404_1405delTC
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000152822
  ensembl transcript: ENST00000507005
  gene symbol: GRM1
  hgvsc: ENST00000507005.1:n.1464_1465delTC
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000425599
  ensembl transcript: ENST00000507907
  gene symbol: GRM1
  hgvsc: ENST00000507907.1:c.950+44_950+45delTC
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000282753
  ensembl transcript: ENST00000282753
  gene symbol: GRM1
  hgvsc: ENST00000282753.1:c.950+44_950+45delTC
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000424095
  ensembl transcript: ENST00000492807
  gene symbol: GRM1
  hgvsc: ENST00000492807.2:c.950+44_950+45delTC
  variant of: http://identifiers.org/hgnc/4593
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 10028
  bin: 1.75e1
  variant carriers: 3595
genotype depth: GenotypeDepth
  all individuals: 2424
  bin: 2.5e0
  variant carriers: 1624
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15330
  bin: 1.25e1
  variant carriers: 7852
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 4.25e1
  variant carriers: 61
genotype depth: GenotypeDepth
  all individuals: 2888
  bin: 3.25e1
  variant carriers: 249
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6276
  bin: 2.25e1
  variant carriers: 1381
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 4.75e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 14939
  bin: 7.5e0
  variant carriers: 9672
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 5.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 4395
  bin: 2.75e1
  variant carriers: 546
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1678
  bin: 3.75e1
  variant carriers: 112
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 5.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 2733
  bin: 2.75e1
  variant carriers: 1464
genotype quality: GenotypeQuality
  all individuals: 12369
  bin: 2.5e0
  variant carriers: 1852
genotype quality: GenotypeQuality
  all individuals: 1467
  bin: 4.25e1
  variant carriers: 651
genotype quality: GenotypeQuality
  all individuals: 14122
  bin: 9.75e1
  variant carriers: 5915
genotype quality: GenotypeQuality
  all individuals: 1663
  bin: 4.75e1
  variant carriers: 675
genotype quality: GenotypeQuality
  all individuals: 1129
  bin: 8.75e1
  variant carriers: 781
genotype quality: GenotypeQuality
  all individuals: 2681
  bin: 7.5e0
  variant carriers: 1045
genotype quality: GenotypeQuality
  all individuals: 1670
  bin: 5.25e1
  variant carriers: 791
num of homozygotes: 513
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: Other
reference allele: TTC
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD

6-146480740-TTCTC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 146480740
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 146480736
    reference: chr 6
allele count: 6776
allele frequency: 1.173943173943174e-1
allele num: 57720
alternate allele: T
canonical: false
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14939
  bin: 7.5e0
  variant carriers: 4055
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 4.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 5.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 10028
  bin: 1.75e1
  variant carriers: 2219
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 4.25e1
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4395
  bin: 2.75e1
  variant carriers: 336
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 15330
  bin: 1.25e1
  variant carriers: 4627
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2424
  bin: 2.5e0
  variant carriers: 409
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1678
  bin: 3.75e1
  variant carriers: 51
genotype depth: GenotypeDepth
  all individuals: 2888
  bin: 3.25e1
  variant carriers: 144
genotype depth: GenotypeDepth
  all individuals: 6276
  bin: 2.25e1
  variant carriers: 849
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1467
  bin: 4.25e1
  variant carriers: 332
genotype quality: GenotypeQuality
  all individuals: 890
  bin: 9.25e1
  variant carriers: 338
genotype quality: GenotypeQuality
  all individuals: 3398
  bin: 2.25e1
  variant carriers: 493
genotype quality: GenotypeQuality
  all individuals: 1305
  bin: 6.75e1
  variant carriers: 406
genotype quality: GenotypeQuality
  all individuals: 1971
  bin: 3.75e1
  variant carriers: 379
genotype quality: GenotypeQuality
  all individuals: 2681
  bin: 7.5e0
  variant carriers: 526
genotype quality: GenotypeQuality
  all individuals: 2733
  bin: 2.75e1
  variant carriers: 526
genotype quality: GenotypeQuality
  all individuals: 1123
  bin: 7.25e1
  variant carriers: 406
genotype quality: GenotypeQuality
  all individuals: 1670
  bin: 5.25e1
  variant carriers: 477
genotype quality: GenotypeQuality
  all individuals: 3007
  bin: 1.75e1
  variant carriers: 479
genotype quality: GenotypeQuality
  all individuals: 14122
  bin: 9.75e1
  variant carriers: 3344
genotype quality: GenotypeQuality
  all individuals: 1663
  bin: 4.75e1
  variant carriers: 371
genotype quality: GenotypeQuality
  all individuals: 1737
  bin: 6.25e1
  variant carriers: 425
genotype quality: GenotypeQuality
  all individuals: 12369
  bin: 2.5e0
  variant carriers: 1346
genotype quality: GenotypeQuality
  all individuals: 2675
  bin: 1.25e1
  variant carriers: 549
genotype quality: GenotypeQuality
  all individuals: 1349
  bin: 5.75e1
  variant carriers: 462
genotype quality: GenotypeQuality
  all individuals: 1375
  bin: 7.75e1
  variant carriers: 592
genotype quality: GenotypeQuality
  all individuals: 1129
  bin: 8.75e1
  variant carriers: 386
genotype quality: GenotypeQuality
  all individuals: 2368
  bin: 3.25e1
  variant carriers: 455
genotype quality: GenotypeQuality
  all individuals: 1190
  bin: 8.25e1
  variant carriers: 458
num of homozygotes: 14
population: South Asian
  type: Population
  allele count: 1403
  allele frequency: 1.520043336944746e-1
  allele num: 9230
  num of homozygotes: 3
population: Latino
  type: Population
  allele count: 461
  allele frequency: 1.019911504424779e-1
  allele num: 4520
  num of homozygotes: 1
population: African
  type: Population
  allele count: 198
  allele frequency: 3.337828725556305e-2
  allele num: 5932
  num of homozygotes: 1
population: East Asian
  type: Population
  allele count: 404
  allele frequency: 1.226472374013358e-1
  allele num: 3294
  num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: TTCTC
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum

6-146480740-TTCTCTC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 146480740
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 146480734
    reference: chr 6
allele count: 2467
allele frequency: 4.274081774081774e-2
allele num: 57720
alternate allele: T
canonical: false
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6276
  bin: 2.25e1
  variant carriers: 292
genotype depth: GenotypeDepth
  all individuals: 2888
  bin: 3.25e1
  variant carriers: 46
genotype depth: GenotypeDepth
  all individuals: 15330
  bin: 1.25e1
  variant carriers: 1687
genotype depth: GenotypeDepth
  all individuals: 1678
  bin: 3.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10028
  bin: 1.75e1
  variant carriers: 817
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14939
  bin: 7.5e0
  variant carriers: 915
genotype depth: GenotypeDepth
  all individuals: 2424
  bin: 2.5e0
  variant carriers: 46
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4395
  bin: 2.75e1
  variant carriers: 100
genotype quality: GenotypeQuality
  all individuals: 1737
  bin: 6.25e1
  variant carriers: 122
genotype quality: GenotypeQuality
  all individuals: 1129
  bin: 8.75e1
  variant carriers: 165
genotype quality: GenotypeQuality
  all individuals: 2733
  bin: 2.75e1
  variant carriers: 148
genotype quality: GenotypeQuality
  all individuals: 2681
  bin: 7.5e0
  variant carriers: 150
genotype quality: GenotypeQuality
  all individuals: 14122
  bin: 9.75e1
  variant carriers: 1428
genotype quality: GenotypeQuality
  all individuals: 2368
  bin: 3.25e1
  variant carriers: 127
genotype quality: GenotypeQuality
  all individuals: 12369
  bin: 2.5e0
  variant carriers: 209
genotype quality: GenotypeQuality
  all individuals: 1663
  bin: 4.75e1
  variant carriers: 105
genotype quality: GenotypeQuality
  all individuals: 3007
  bin: 1.75e1
  variant carriers: 164
genotype quality: GenotypeQuality
  all individuals: 1971
  bin: 3.75e1
  variant carriers: 131
genotype quality: GenotypeQuality
  all individuals: 1375
  bin: 7.75e1
  variant carriers: 89
genotype quality: GenotypeQuality
  all individuals: 1670
  bin: 5.25e1
  variant carriers: 119
genotype quality: GenotypeQuality
  all individuals: 2675
  bin: 1.25e1
  variant carriers: 167
genotype quality: GenotypeQuality
  all individuals: 1467
  bin: 4.25e1
  variant carriers: 104
genotype quality: GenotypeQuality
  all individuals: 3398
  bin: 2.25e1
  variant carriers: 144
genotype quality: GenotypeQuality
  all individuals: 1349
  bin: 5.75e1
  variant carriers: 119
genotype quality: GenotypeQuality
  all individuals: 1123
  bin: 7.25e1
  variant carriers: 99
genotype quality: GenotypeQuality
  all individuals: 1305
  bin: 6.75e1
  variant carriers: 113
genotype quality: GenotypeQuality
  all individuals: 890
  bin: 9.25e1
  variant carriers: 106
genotype quality: GenotypeQuality
  all individuals: 1190
  bin: 8.25e1
  variant carriers: 105
num of homozygotes: 11
population: East Asian
  type: Population
  allele count: 181
  allele frequency: 5.494839101396479e-2
  allele num: 3294
  num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 1225
  allele frequency: 3.836277088813729e-2
  allele num: 31932
  num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 640
  allele frequency: 6.933911159263272e-2
  allele num: 9230
  num of homozygotes: 9
population: African
  type: Population
  allele count: 102
  allele frequency: 1.719487525286581e-2
  allele num: 5932
  num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
reference allele: TTCTCTC
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum

6-146480740-TTCTCTCTCTC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 146480740
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 146480730
    reference: chr 6
allele count: 8163
allele frequency: 1.414241164241164e-1
allele num: 57720
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000376119
  ensembl transcript: ENST00000392299
  gene symbol: GRM1
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000347437
  ensembl transcript: ENST00000355289
  gene symbol: GRM1
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000354896
  ensembl transcript: ENST00000361719
  gene symbol: GRM1
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000424095
  ensembl transcript: ENST00000492807
  gene symbol: GRM1
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000152822
  ensembl transcript: ENST00000502405
  gene symbol: GRM1
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000282753
  ensembl transcript: ENST00000282753
  gene symbol: GRM1
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000152822
  ensembl transcript: ENST00000507005
  gene symbol: GRM1
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000425599
  ensembl transcript: ENST00000507907
  gene symbol: GRM1
  variant of: http://identifiers.org/hgnc/4593
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6276
  bin: 2.25e1
  variant carriers: 1428
genotype depth: GenotypeDepth
  all individuals: 14939
  bin: 7.5e0
  variant carriers: 1835
genotype depth: GenotypeDepth
  all individuals: 1678
  bin: 3.75e1
  variant carriers: 129
genotype depth: GenotypeDepth
  all individuals: 2424
  bin: 2.5e0
  variant carriers: 209
genotype depth: GenotypeDepth
  all individuals: 15330
  bin: 1.25e1
  variant carriers: 3655
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 5.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 10028
  bin: 1.75e1
  variant carriers: 3009
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2888
  bin: 3.25e1
  variant carriers: 282
genotype depth: GenotypeDepth
  all individuals: 4395
  bin: 2.75e1
  variant carriers: 638
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 5.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 6.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 4.25e1
  variant carriers: 64
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 4.75e1
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2733
  bin: 2.75e1
  variant carriers: 166
genotype quality: GenotypeQuality
  all individuals: 2368
  bin: 3.25e1
  variant carriers: 215
genotype quality: GenotypeQuality
  all individuals: 1349
  bin: 5.75e1
  variant carriers: 198
genotype quality: GenotypeQuality
  all individuals: 1670
  bin: 5.25e1
  variant carriers: 213
genotype quality: GenotypeQuality
  all individuals: 1663
  bin: 4.75e1
  variant carriers: 204
genotype quality: GenotypeQuality
  all individuals: 2675
  bin: 1.25e1
  variant carriers: 169
genotype quality: GenotypeQuality
  all individuals: 890
  bin: 9.25e1
  variant carriers: 213
genotype quality: GenotypeQuality
  all individuals: 2681
  bin: 7.5e0
  variant carriers: 176
genotype quality: GenotypeQuality
  all individuals: 1375
  bin: 7.75e1
  variant carriers: 223
genotype quality: GenotypeQuality
  all individuals: 1971
  bin: 3.75e1
  variant carriers: 192
num of homozygotes: 138
population: Other
population: Latino
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: TTCTCTCTCTC
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: DP

6-146480740-TTCTCTCTCTCTC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 146480740
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 146480728
    reference: chr 6
allele count: 1087
allele frequency: 1.883229383229383e-2
allele num: 57720
alternate allele: T
canonical: false
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2424
  bin: 2.5e0
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 10028
  bin: 1.75e1
  variant carriers: 409
genotype depth: GenotypeDepth
  all individuals: 6276
  bin: 2.25e1
  variant carriers: 193
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 4.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15330
  bin: 1.25e1
  variant carriers: 476
genotype depth: GenotypeDepth
  all individuals: 2888
  bin: 3.25e1
  variant carriers: 50
genotype depth: GenotypeDepth
  all individuals: 14939
  bin: 7.5e0
  variant carriers: 170
genotype depth: GenotypeDepth
  all individuals: 1678
  bin: 3.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4395
  bin: 2.75e1
  variant carriers: 80
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 4.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 6.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3398
  bin: 2.25e1
  variant carriers: 49
genotype quality: GenotypeQuality
  all individuals: 2675
  bin: 1.25e1
  variant carriers: 42
genotype quality: GenotypeQuality
  all individuals: 1190
  bin: 8.25e1
  variant carriers: 27
genotype quality: GenotypeQuality
  all individuals: 1971
  bin: 3.75e1
  variant carriers: 24
genotype quality: GenotypeQuality
  all individuals: 14122
  bin: 9.75e1
  variant carriers: 639
genotype quality: GenotypeQuality
  all individuals: 1670
  bin: 5.25e1
  variant carriers: 31
genotype quality: GenotypeQuality
  all individuals: 1129
  bin: 8.75e1
  variant carriers: 52
genotype quality: GenotypeQuality
  all individuals: 2681
  bin: 7.5e0
  variant carriers: 36
genotype quality: GenotypeQuality
  all individuals: 3007
  bin: 1.75e1
  variant carriers: 50
genotype quality: GenotypeQuality
  all individuals: 2733
  bin: 2.75e1
  variant carriers: 45
genotype quality: GenotypeQuality
  all individuals: 1663
  bin: 4.75e1
  variant carriers: 48
genotype quality: GenotypeQuality
  all individuals: 1349
  bin: 5.75e1
  variant carriers: 34
genotype quality: GenotypeQuality
  all individuals: 12369
  bin: 2.5e0
  variant carriers: 83
genotype quality: GenotypeQuality
  all individuals: 890
  bin: 9.25e1
  variant carriers: 39
genotype quality: GenotypeQuality
  all individuals: 1467
  bin: 4.25e1
  variant carriers: 38
genotype quality: GenotypeQuality
  all individuals: 2368
  bin: 3.25e1
  variant carriers: 46
genotype quality: GenotypeQuality
  all individuals: 1305
  bin: 6.75e1
  variant carriers: 45
genotype quality: GenotypeQuality
  all individuals: 1737
  bin: 6.25e1
  variant carriers: 42
genotype quality: GenotypeQuality
  all individuals: 1123
  bin: 7.25e1
  variant carriers: 30
genotype quality: GenotypeQuality
  all individuals: 1375
  bin: 7.75e1
  variant carriers: 45
num of homozygotes: 2
population: European (Finnish)
  type: Population
  allele count: 36
  allele frequency: 1.511335012594458e-2
  allele num: 2382
  num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 61
  allele frequency: 1.851851851851852e-2
  allele num: 3294
  num of homozygotes: 1
population: Other
  type: Population
  allele count: 3
  allele frequency: 6.976744186046512e-3
  allele num: 430
  num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 219
  allele frequency: 2.372697724810401e-2
  allele num: 9230
  num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
reference allele: TTCTCTCTCTCTC
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum

6-146480740-TTCTCTCTCTCTCTC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 146480740
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 146480726
    reference: chr 6
allele count: 1596
allele frequency: 2.765072765072765e-2
allele num: 57720
alternate allele: T
canonical: false
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14939
  bin: 7.5e0
  variant carriers: 238
genotype depth: GenotypeDepth
  all individuals: 2424
  bin: 2.5e0
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 10028
  bin: 1.75e1
  variant carriers: 500
genotype depth: GenotypeDepth
  all individuals: 6276
  bin: 2.25e1
  variant carriers: 303
genotype depth: GenotypeDepth
  all individuals: 2888
  bin: 3.25e1
  variant carriers: 81
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4395
  bin: 2.75e1
  variant carriers: 172
genotype depth: GenotypeDepth
  all individuals: 1678
  bin: 3.75e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 4.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15330
  bin: 1.25e1
  variant carriers: 540
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 4.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1349
  bin: 5.75e1
  variant carriers: 31
genotype quality: GenotypeQuality
  all individuals: 2675
  bin: 1.25e1
  variant carriers: 28
genotype quality: GenotypeQuality
  all individuals: 12369
  bin: 2.5e0
  variant carriers: 151
genotype quality: GenotypeQuality
  all individuals: 1737
  bin: 6.25e1
  variant carriers: 26
genotype quality: GenotypeQuality
  all individuals: 1375
  bin: 7.75e1
  variant carriers: 20
genotype quality: GenotypeQuality
  all individuals: 1971
  bin: 3.75e1
  variant carriers: 26
genotype quality: GenotypeQuality
  all individuals: 14122
  bin: 9.75e1
  variant carriers: 1299
genotype quality: GenotypeQuality
  all individuals: 1190
  bin: 8.25e1
  variant carriers: 34
genotype quality: GenotypeQuality
  all individuals: 1663
  bin: 4.75e1
  variant carriers: 42
genotype quality: GenotypeQuality
  all individuals: 2733
  bin: 2.75e1
  variant carriers: 20
genotype quality: GenotypeQuality
  all individuals: 2681
  bin: 7.5e0
  variant carriers: 23
genotype quality: GenotypeQuality
  all individuals: 3007
  bin: 1.75e1
  variant carriers: 25
genotype quality: GenotypeQuality
  all individuals: 1129
  bin: 8.75e1
  variant carriers: 29
genotype quality: GenotypeQuality
  all individuals: 3398
  bin: 2.25e1
  variant carriers: 31
genotype quality: GenotypeQuality
  all individuals: 1305
  bin: 6.75e1
  variant carriers: 22
genotype quality: GenotypeQuality
  all individuals: 2368
  bin: 3.25e1
  variant carriers: 31
genotype quality: GenotypeQuality
  all individuals: 1670
  bin: 5.25e1
  variant carriers: 21
genotype quality: GenotypeQuality
  all individuals: 890
  bin: 9.25e1
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 1123
  bin: 7.25e1
  variant carriers: 20
genotype quality: GenotypeQuality
  all individuals: 1467
  bin: 4.25e1
  variant carriers: 29
num of homozygotes: 88
population: Latino
  type: Population
  allele count: 105
  allele frequency: 2.323008849557522e-2
  allele num: 4520
  num of homozygotes: 1
population: African
  type: Population
  allele count: 1366
  allele frequency: 2.302764666217127e-1
  allele num: 5932
  num of homozygotes: 87
population: South Asian
  type: Population
  allele count: 31
  allele frequency: 3.358613217768147e-3
  allele num: 9230
  num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 4
  allele frequency: 1.679261125104954e-3
  allele num: 2382
  num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: TTCTCTCTCTCTCTC
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: QD

6-146480743-T-TCTCC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 146480743
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 146480747
    reference: chr 6
allele count: 1
allele frequency: 1.987281399046105e-4
allele num: 5032
alternate allele: TCTCC
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000152822
  ensembl transcript: ENST00000507005
  gene symbol: GRM1
  hgvsc: ENST00000507005.1:n.1433_1434insCCTC
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000376119
  ensembl transcript: ENST00000392299
  gene symbol: GRM1
  hgvsc: ENST00000392299.2:c.950+13_950+14insCCTC
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000282753
  ensembl transcript: ENST00000282753
  gene symbol: GRM1
  hgvsc: ENST00000282753.1:c.950+13_950+14insCCTC
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000424095
  ensembl transcript: ENST00000492807
  gene symbol: GRM1
  hgvsc: ENST00000492807.2:c.950+13_950+14insCCTC
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000152822
  ensembl transcript: ENST00000502405
  gene symbol: GRM1
  hgvsc: ENST00000502405.1:n.1373_1374insCCTC
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000425599
  ensembl transcript: ENST00000507907
  gene symbol: GRM1
  hgvsc: ENST00000507907.1:c.950+13_950+14insCCTC
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000347437
  ensembl transcript: ENST00000355289
  gene symbol: GRM1
  hgvsc: ENST00000355289.4:c.950+13_950+14insCCTC
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000354896
  ensembl transcript: ENST00000361719
  gene symbol: GRM1
  hgvsc: ENST00000361719.2:c.950+13_950+14insCCTC
  variant of: http://identifiers.org/hgnc/4593
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2529
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3566
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1577
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3288
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4274
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3929
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2053
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 895
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 952
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14897
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1226
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 150
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
reference allele: T
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD

6-146480751-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 146480751
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 146480751
    reference: chr 6
allele count: 1
allele frequency: 1.410875024690313e-5
allele num: 70878
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000152822
  ensembl transcript: ENST00000502405
  gene symbol: GRM1
  hgvsc: ENST00000502405.1:n.1378T>C
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000376119
  ensembl transcript: ENST00000392299
  gene symbol: GRM1
  hgvsc: ENST00000392299.2:c.950+18T>C
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000354896
  ensembl transcript: ENST00000361719
  gene symbol: GRM1
  hgvsc: ENST00000361719.2:c.950+18T>C
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000425599
  ensembl transcript: ENST00000507907
  gene symbol: GRM1
  hgvsc: ENST00000507907.1:c.950+18T>C
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000347437
  ensembl transcript: ENST00000355289
  gene symbol: GRM1
  hgvsc: ENST00000355289.4:c.950+18T>C
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000424095
  ensembl transcript: ENST00000492807
  gene symbol: GRM1
  hgvsc: ENST00000492807.2:c.950+18T>C
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000282753
  ensembl transcript: ENST00000282753
  gene symbol: GRM1
  hgvsc: ENST00000282753.1:c.950+18T>C
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000152822
  ensembl transcript: ENST00000507005
  gene symbol: GRM1
  hgvsc: ENST00000507005.1:n.1438T>C
  variant of: http://identifiers.org/hgnc/4593
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 880
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4737
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5862
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7121
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12753
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9269
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2059
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1339
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2372
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 378
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3052
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1441
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 344
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15986
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 933
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5897
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum

6-146480754-CT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 146480754
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 146480753
    reference: chr 6
allele count: 1
allele frequency: 1.056680333065641e-5
allele num: 94636
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000376119
  ensembl transcript: ENST00000392299
  gene symbol: GRM1
  hgvsc: ENST00000392299.2:c.950+22delT
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000347437
  ensembl transcript: ENST00000355289
  gene symbol: GRM1
  hgvsc: ENST00000355289.4:c.950+22delT
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000152822
  ensembl transcript: ENST00000507005
  gene symbol: GRM1
  hgvsc: ENST00000507005.1:n.1442delT
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000425599
  ensembl transcript: ENST00000507907
  gene symbol: GRM1
  hgvsc: ENST00000507907.1:c.950+22delT
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000424095
  ensembl transcript: ENST00000492807
  gene symbol: GRM1
  hgvsc: ENST00000492807.2:c.950+22delT
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000354896
  ensembl transcript: ENST00000361719
  gene symbol: GRM1
  hgvsc: ENST00000361719.2:c.950+22delT
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000152822
  ensembl transcript: ENST00000502405
  gene symbol: GRM1
  hgvsc: ENST00000502405.1:n.1382delT
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000282753
  ensembl transcript: ENST00000282753
  gene symbol: GRM1
  hgvsc: ENST00000282753.1:c.950+22delT
  variant of: http://identifiers.org/hgnc/4593
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5050
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1335
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3021
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8443
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2759
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 859
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6329
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10357
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2016
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14986
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5679
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 598
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5586
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 396
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 912
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: CT
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: ReadPosRankSum

6-146480756-CT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 146480756
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 146480755
    reference: chr 6
allele count: 5
allele frequency: 5.046223406402648e-5
allele num: 99084
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000152822
  ensembl transcript: ENST00000502405
  gene symbol: GRM1
  hgvsc: ENST00000502405.1:n.1384delT
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000354896
  ensembl transcript: ENST00000361719
  gene symbol: GRM1
  hgvsc: ENST00000361719.2:c.950+24delT
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000376119
  ensembl transcript: ENST00000392299
  gene symbol: GRM1
  hgvsc: ENST00000392299.2:c.950+24delT
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000424095
  ensembl transcript: ENST00000492807
  gene symbol: GRM1
  hgvsc: ENST00000492807.2:c.950+24delT
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000347437
  ensembl transcript: ENST00000355289
  gene symbol: GRM1
  hgvsc: ENST00000355289.4:c.950+24delT
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000282753
  ensembl transcript: ENST00000282753
  gene symbol: GRM1
  hgvsc: ENST00000282753.1:c.950+24delT
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000152822
  ensembl transcript: ENST00000507005
  gene symbol: GRM1
  hgvsc: ENST00000507005.1:n.1444delT
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000425599
  ensembl transcript: ENST00000507907
  gene symbol: GRM1
  hgvsc: ENST00000507907.1:c.950+24delT
  variant of: http://identifiers.org/hgnc/4593
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15220
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1971
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1327
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8784
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2872
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10533
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5218
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2935
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6700
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1351
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1547
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5325
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 769
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20493
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5805
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6509
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 1
population: European (Finnish)
population: Other
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: CT
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD

6-146480757-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 146480757
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 146480757
    reference: chr 6
allele count: 4
allele frequency: 4.002882075094068e-5
allele num: 99928
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000354896
  ensembl transcript: ENST00000361719
  gene symbol: GRM1
  hgvsc: ENST00000361719.2:c.950+24T>A
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000425599
  ensembl transcript: ENST00000507907
  gene symbol: GRM1
  hgvsc: ENST00000507907.1:c.950+24T>A
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000282753
  ensembl transcript: ENST00000282753
  gene symbol: GRM1
  hgvsc: ENST00000282753.1:c.950+24T>A
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000152822
  ensembl transcript: ENST00000502405
  gene symbol: GRM1
  hgvsc: ENST00000502405.1:n.1384T>A
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000152822
  ensembl transcript: ENST00000507005
  gene symbol: GRM1
  hgvsc: ENST00000507005.1:n.1444T>A
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000376119
  ensembl transcript: ENST00000392299
  gene symbol: GRM1
  hgvsc: ENST00000392299.2:c.950+24T>A
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000424095
  ensembl transcript: ENST00000492807
  gene symbol: GRM1
  hgvsc: ENST00000492807.2:c.950+24T>A
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000347437
  ensembl transcript: ENST00000355289
  gene symbol: GRM1
  hgvsc: ENST00000355289.4:c.950+24T>A
  variant of: http://identifiers.org/hgnc/4593
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 833
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 564
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8893
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1946
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2875
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15191
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6786
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2927
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10535
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5239
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1299
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5717
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1166
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5826
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6912
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1646
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 246
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1488
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 669
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 1
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP

6-146480759-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 146480759
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 146480759
    reference: chr 6
allele count: 80
allele frequency: 7.94502045842768e-4
allele num: 100692
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000282753
  ensembl transcript: ENST00000282753
  gene symbol: GRM1
  hgvsc: ENST00000282753.1:c.950+26T>A
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000152822
  ensembl transcript: ENST00000502405
  gene symbol: GRM1
  hgvsc: ENST00000502405.1:n.1386T>A
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000376119
  ensembl transcript: ENST00000392299
  gene symbol: GRM1
  hgvsc: ENST00000392299.2:c.950+26T>A
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000424095
  ensembl transcript: ENST00000492807
  gene symbol: GRM1
  hgvsc: ENST00000492807.2:c.950+26T>A
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000354896
  ensembl transcript: ENST00000361719
  gene symbol: GRM1
  hgvsc: ENST00000361719.2:c.950+26T>A
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000425599
  ensembl transcript: ENST00000507907
  gene symbol: GRM1
  hgvsc: ENST00000507907.1:c.950+26T>A
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000152822
  ensembl transcript: ENST00000507005
  gene symbol: GRM1
  hgvsc: ENST00000507005.1:n.1446T>A
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000347437
  ensembl transcript: ENST00000355289
  gene symbol: GRM1
  hgvsc: ENST00000355289.4:c.950+26T>A
  variant of: http://identifiers.org/hgnc/4593
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1257
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5233
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6951
  bin: 2.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 15114
  bin: 1.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10537
  bin: 2.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 3036
  bin: 7.5e0
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 9062
  bin: 1.25e1
  variant carriers: 38
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1860
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2731
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21049
  bin: 2.25e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 5625
  bin: 3.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 1029
  bin: 1.75e1
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 1664
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4957
  bin: 7.5e0
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 1257
  bin: 4.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 5.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 3272
  bin: 3.75e1
  variant carriers: 3
num of homozygotes: 26
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: Other
population: South Asian
reference allele: T
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

6-146480760-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 146480760
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 146480760
    reference: chr 6
allele count: 137
allele frequency: 1.358399270232217e-3
allele num: 100854
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000347437
  ensembl transcript: ENST00000355289
  gene symbol: GRM1
  hgvsc: ENST00000355289.4:c.950+27C>G
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000282753
  ensembl transcript: ENST00000282753
  gene symbol: GRM1
  hgvsc: ENST00000282753.1:c.950+27C>G
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000424095
  ensembl transcript: ENST00000492807
  gene symbol: GRM1
  hgvsc: ENST00000492807.2:c.950+27C>G
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000376119
  ensembl transcript: ENST00000392299
  gene symbol: GRM1
  hgvsc: ENST00000392299.2:c.950+27C>G
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000354896
  ensembl transcript: ENST00000361719
  gene symbol: GRM1
  hgvsc: ENST00000361719.2:c.950+27C>G
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000152822
  ensembl transcript: ENST00000507005
  gene symbol: GRM1
  hgvsc: ENST00000507005.1:n.1447C>G
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000152822
  ensembl transcript: ENST00000502405
  gene symbol: GRM1
  hgvsc: ENST00000502405.1:n.1387C>G
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000425599
  ensembl transcript: ENST00000507907
  gene symbol: GRM1
  hgvsc: ENST00000507907.1:c.950+27C>G
  variant of: http://identifiers.org/hgnc/4593
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3116
  bin: 7.5e0
  variant carriers: 37
genotype depth: GenotypeDepth
  all individuals: 9135
  bin: 1.25e1
  variant carriers: 52
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15070
  bin: 1.75e1
  variant carriers: 42
genotype depth: GenotypeDepth
  all individuals: 1223
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1822
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2679
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6997
  bin: 2.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10545
  bin: 2.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5207
  bin: 3.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 1221
  bin: 4.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 1198
  bin: 4.25e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 1105
  bin: 1.25e1
  variant carriers: 21
genotype quality: GenotypeQuality
  all individuals: 8193
  bin: 6.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 967
  bin: 1.75e1
  variant carriers: 16
genotype quality: GenotypeQuality
  all individuals: 21158
  bin: 2.25e1
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 4860
  bin: 7.5e0
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 665
  bin: 7.75e1
  variant carriers: 1
num of homozygotes: 45
population: East Asian
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
reference allele: C
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: QD

6-146480761-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 146480761
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 146480761
    reference: chr 6
allele count: 67
allele frequency: 6.617414664981037e-4
allele num: 101248
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000425599
  ensembl transcript: ENST00000507907
  gene symbol: GRM1
  hgvsc: ENST00000507907.1:c.950+28T>A
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000152822
  ensembl transcript: ENST00000507005
  gene symbol: GRM1
  hgvsc: ENST00000507005.1:n.1448T>A
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000152822
  ensembl transcript: ENST00000502405
  gene symbol: GRM1
  hgvsc: ENST00000502405.1:n.1388T>A
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000376119
  ensembl transcript: ENST00000392299
  gene symbol: GRM1
  hgvsc: ENST00000392299.2:c.950+28T>A
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000354896
  ensembl transcript: ENST00000361719
  gene symbol: GRM1
  hgvsc: ENST00000361719.2:c.950+28T>A
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000282753
  ensembl transcript: ENST00000282753
  gene symbol: GRM1
  hgvsc: ENST00000282753.1:c.950+28T>A
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000347437
  ensembl transcript: ENST00000355289
  gene symbol: GRM1
  hgvsc: ENST00000355289.4:c.950+28T>A
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000424095
  ensembl transcript: ENST00000492807
  gene symbol: GRM1
  hgvsc: ENST00000492807.2:c.950+28T>A
  variant of: http://identifiers.org/hgnc/4593
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9155
  bin: 1.25e1
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 2633
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1802
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10588
  bin: 2.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 15073
  bin: 1.75e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3104
  bin: 7.5e0
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 777
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1203
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7058
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5203
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 283
  bin: 2.5e0
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 1141
  bin: 4.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 5530
  bin: 3.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 4751
  bin: 7.5e0
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 711
  bin: 9.75e1
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 21277
  bin: 2.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 234
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1675
  bin: 6.75e1
  variant carriers: 2
num of homozygotes: 18
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP

6-146480764-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 146480764
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 146480764
    reference: chr 6
allele count: 1
allele frequency: 9.585889570552148e-6
allele num: 104320
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000152822
  ensembl transcript: ENST00000502405
  gene symbol: GRM1
  hgvsc: ENST00000502405.1:n.1391C>G
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000347437
  ensembl transcript: ENST00000355289
  gene symbol: GRM1
  hgvsc: ENST00000355289.4:c.950+31C>G
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000354896
  ensembl transcript: ENST00000361719
  gene symbol: GRM1
  hgvsc: ENST00000361719.2:c.950+31C>G
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000425599
  ensembl transcript: ENST00000507907
  gene symbol: GRM1
  hgvsc: ENST00000507907.1:c.950+31C>G
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000152822
  ensembl transcript: ENST00000507005
  gene symbol: GRM1
  hgvsc: ENST00000507005.1:n.1451C>G
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000376119
  ensembl transcript: ENST00000392299
  gene symbol: GRM1
  hgvsc: ENST00000392299.2:c.950+31C>G
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000282753
  ensembl transcript: ENST00000282753
  gene symbol: GRM1
  hgvsc: ENST00000282753.1:c.950+31C>G
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000424095
  ensembl transcript: ENST00000492807
  gene symbol: GRM1
  hgvsc: ENST00000492807.2:c.950+31C>G
  variant of: http://identifiers.org/hgnc/4593
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5148
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1800
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15399
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10927
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9587
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1209
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2573
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3322
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7378
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1749
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21807
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 968
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5768
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 304
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5573
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4550
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP

6-146480765-TCTCTCTCTCTCTCACA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 146480765
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 146480749
    reference: chr 6
allele count: 7
allele frequency: 6.856963736457496e-5
allele num: 102086
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000354896
  ensembl transcript: ENST00000361719
  gene symbol: GRM1
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000347437
  ensembl transcript: ENST00000355289
  gene symbol: GRM1
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000282753
  ensembl transcript: ENST00000282753
  gene symbol: GRM1
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000376119
  ensembl transcript: ENST00000392299
  gene symbol: GRM1
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000425599
  ensembl transcript: ENST00000507907
  gene symbol: GRM1
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000152822
  ensembl transcript: ENST00000502405
  gene symbol: GRM1
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000152822
  ensembl transcript: ENST00000507005
  gene symbol: GRM1
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000424095
  ensembl transcript: ENST00000492807
  gene symbol: GRM1
  variant of: http://identifiers.org/hgnc/4593
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 9658
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10994
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15414
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7444
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5138
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2575
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3351
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1190
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1800
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1208
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1419
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2854
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21289
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5298
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 921
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4481
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1085
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 682
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
reference allele: TCTCTCTCTCTCTCACA
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum

6-146480767-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 146480767
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 146480767
    reference: chr 6
allele count: 10
allele frequency: 1.037236801161705e-4
allele num: 96410
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000152822
  ensembl transcript: ENST00000507005
  gene symbol: GRM1
  hgvsc: ENST00000507005.1:n.1454T>A
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000354896
  ensembl transcript: ENST00000361719
  gene symbol: GRM1
  hgvsc: ENST00000361719.2:c.950+34T>A
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000376119
  ensembl transcript: ENST00000392299
  gene symbol: GRM1
  hgvsc: ENST00000392299.2:c.950+34T>A
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000152822
  ensembl transcript: ENST00000502405
  gene symbol: GRM1
  hgvsc: ENST00000502405.1:n.1394T>A
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000282753
  ensembl transcript: ENST00000282753
  gene symbol: GRM1
  hgvsc: ENST00000282753.1:c.950+34T>A
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000425599
  ensembl transcript: ENST00000507907
  gene symbol: GRM1
  hgvsc: ENST00000507907.1:c.950+34T>A
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000424095
  ensembl transcript: ENST00000492807
  gene symbol: GRM1
  hgvsc: ENST00000492807.2:c.950+34T>A
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000347437
  ensembl transcript: ENST00000355289
  gene symbol: GRM1
  hgvsc: ENST00000355289.4:c.950+34T>A
  variant of: http://identifiers.org/hgnc/4593
canonical: false
consequence: non coding transcript exon
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7494
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3451
  bin: 7.5e0
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 4950
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1164
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9803
  bin: 1.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 15394
  bin: 1.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2537
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10984
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1758
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1340
  bin: 1.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 306
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4067
  bin: 2.5e0
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 20233
  bin: 2.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1171
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 458
  bin: 5.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 5096
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 647
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
reference allele: T
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP

6-146480769-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 146480769
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 146480769
    reference: chr 6
allele count: 1362
allele frequency: 1.544427813307933e-2
allele num: 88188
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000282753
  ensembl transcript: ENST00000282753
  gene symbol: GRM1
  hgvsc: ENST00000282753.1:c.950+36T>A
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000376119
  ensembl transcript: ENST00000392299
  gene symbol: GRM1
  hgvsc: ENST00000392299.2:c.950+36T>A
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000347437
  ensembl transcript: ENST00000355289
  gene symbol: GRM1
  hgvsc: ENST00000355289.4:c.950+36T>A
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000424095
  ensembl transcript: ENST00000492807
  gene symbol: GRM1
  hgvsc: ENST00000492807.2:c.950+36T>A
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000152822
  ensembl transcript: ENST00000507005
  gene symbol: GRM1
  hgvsc: ENST00000507005.1:n.1456T>A
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000354896
  ensembl transcript: ENST00000361719
  gene symbol: GRM1
  hgvsc: ENST00000361719.2:c.950+36T>A
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000152822
  ensembl transcript: ENST00000502405
  gene symbol: GRM1
  hgvsc: ENST00000502405.1:n.1396T>A
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000425599
  ensembl transcript: ENST00000507907
  gene symbol: GRM1
  hgvsc: ENST00000507907.1:c.950+36T>A
  variant of: http://identifiers.org/hgnc/4593
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 1116
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 10408
  bin: 1.25e1
  variant carriers: 678
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 2.5e0
  variant carriers: 56
genotype depth: GenotypeDepth
  all individuals: 1655
  bin: 4.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2397
  bin: 3.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 10597
  bin: 2.25e1
  variant carriers: 184
genotype depth: GenotypeDepth
  all individuals: 15144
  bin: 1.75e1
  variant carriers: 441
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 5.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 3873
  bin: 7.5e0
  variant carriers: 326
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4581
  bin: 3.25e1
  variant carriers: 40
genotype depth: GenotypeDepth
  all individuals: 7273
  bin: 2.75e1
  variant carriers: 59
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9058
  bin: 6.25e1
  variant carriers: 47
genotype quality: GenotypeQuality
  all individuals: 4283
  bin: 7.5e0
  variant carriers: 68
genotype quality: GenotypeQuality
  all individuals: 1521
  bin: 1.25e1
  variant carriers: 50
genotype quality: GenotypeQuality
  all individuals: 6916
  bin: 2.5e0
  variant carriers: 52
genotype quality: GenotypeQuality
  all individuals: 893
  bin: 4.25e1
  variant carriers: 47
genotype quality: GenotypeQuality
  all individuals: 564
  bin: 7.25e1
  variant carriers: 47
genotype quality: GenotypeQuality
  all individuals: 577
  bin: 7.75e1
  variant carriers: 49
genotype quality: GenotypeQuality
  all individuals: 374
  bin: 8.25e1
  variant carriers: 49
num of homozygotes: 10
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
population: Other
population: European (Finnish)
reference allele: T
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD

6-146480769-T-TCA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 146480769
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 146480771
    reference: chr 6
allele count: 11
allele frequency: 1.247335238354425e-4
allele num: 88188
alternate allele: TCA
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000152822
  ensembl transcript: ENST00000507005
  gene symbol: GRM1
  hgvsc: ENST00000507005.1:n.1457_1458insAC
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000282753
  ensembl transcript: ENST00000282753
  gene symbol: GRM1
  hgvsc: ENST00000282753.1:c.950+37_950+38insAC
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000376119
  ensembl transcript: ENST00000392299
  gene symbol: GRM1
  hgvsc: ENST00000392299.2:c.950+37_950+38insAC
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000354896
  ensembl transcript: ENST00000361719
  gene symbol: GRM1
  hgvsc: ENST00000361719.2:c.950+37_950+38insAC
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000152822
  ensembl transcript: ENST00000502405
  gene symbol: GRM1
  hgvsc: ENST00000502405.1:n.1397_1398insAC
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000425599
  ensembl transcript: ENST00000507907
  gene symbol: GRM1
  hgvsc: ENST00000507907.1:c.950+37_950+38insAC
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000347437
  ensembl transcript: ENST00000355289
  gene symbol: GRM1
  hgvsc: ENST00000355289.4:c.950+37_950+38insAC
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000424095
  ensembl transcript: ENST00000492807
  gene symbol: GRM1
  hgvsc: ENST00000492807.2:c.950+37_950+38insAC
  variant of: http://identifiers.org/hgnc/4593
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 10408
  bin: 1.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 15144
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7273
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3873
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1655
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10597
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1116
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2397
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4581
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1404
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 18266
  bin: 2.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 9058
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4283
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 495
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1498
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 361
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4595
  bin: 2.75e1
  variant carriers: 1
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: Other
reference allele: T
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

6-146480769-TCTCTCTCTCA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 146480769
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 146480759
    reference: chr 6
allele count: 10
allele frequency: 1.13394112577675e-4
allele num: 88188
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000347437
  ensembl transcript: ENST00000355289
  gene symbol: GRM1
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000152822
  ensembl transcript: ENST00000502405
  gene symbol: GRM1
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000354896
  ensembl transcript: ENST00000361719
  gene symbol: GRM1
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000152822
  ensembl transcript: ENST00000507005
  gene symbol: GRM1
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000425599
  ensembl transcript: ENST00000507907
  gene symbol: GRM1
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000424095
  ensembl transcript: ENST00000492807
  gene symbol: GRM1
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000282753
  ensembl transcript: ENST00000282753
  gene symbol: GRM1
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000376119
  ensembl transcript: ENST00000392299
  gene symbol: GRM1
  variant of: http://identifiers.org/hgnc/4593
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 10597
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2397
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3873
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15144
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 10408
  bin: 1.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1655
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7273
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1116
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4581
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 361
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 227
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6916
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 577
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 893
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9058
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2105
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 259
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4283
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1404
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: TCTCTCTCTCA
site quality: MQ
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP

6-146480769-TCTCTCTCTCACA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 146480769
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 146480757
    reference: chr 6
allele count: 2
allele frequency: 2.267882251553499e-5
allele num: 88188
alternate allele: T
canonical: false
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10408
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4581
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3873
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15144
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7273
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10597
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1655
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1116
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2397
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1521
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 564
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1398
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18266
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 495
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1404
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4194
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 893
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 708
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4283
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 259
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9058
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1498
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 361
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 374
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6916
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4595
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 577
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 227
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2105
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 49450
  num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4938
  num of homozygotes: 0
population: East Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6318
  num of homozygotes: 0
population: African
  type: Population
  allele count: 2
  allele frequency: 3.428179636612959e-4
  allele num: 5834
  num of homozygotes: 0
population: Latino
population: Other
population: South Asian
reference allele: TCTCTCTCTCACA
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum

6-146480771-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 146480771
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 146480771
    reference: chr 6
allele count: 3142
allele frequency: 3.824804012270536e-2
allele num: 82148
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000282753
  ensembl transcript: ENST00000282753
  gene symbol: GRM1
  hgvsc: ENST00000282753.1:c.950+38T>A
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000425599
  ensembl transcript: ENST00000507907
  gene symbol: GRM1
  hgvsc: ENST00000507907.1:c.950+38T>A
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000152822
  ensembl transcript: ENST00000507005
  gene symbol: GRM1
  hgvsc: ENST00000507005.1:n.1458T>A
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000152822
  ensembl transcript: ENST00000502405
  gene symbol: GRM1
  hgvsc: ENST00000502405.1:n.1398T>A
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000347437
  ensembl transcript: ENST00000355289
  gene symbol: GRM1
  hgvsc: ENST00000355289.4:c.950+38T>A
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000424095
  ensembl transcript: ENST00000492807
  gene symbol: GRM1
  hgvsc: ENST00000492807.2:c.950+38T>A
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000376119
  ensembl transcript: ENST00000392299
  gene symbol: GRM1
  hgvsc: ENST00000392299.2:c.950+38T>A
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000354896
  ensembl transcript: ENST00000361719
  gene symbol: GRM1
  hgvsc: ENST00000361719.2:c.950+38T>A
  variant of: http://identifiers.org/hgnc/4593
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 2.5e0
  variant carriers: 90
genotype depth: GenotypeDepth
  all individuals: 15232
  bin: 1.75e1
  variant carriers: 913
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 5.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 6930
  bin: 2.75e1
  variant carriers: 190
genotype depth: GenotypeDepth
  all individuals: 10466
  bin: 2.25e1
  variant carriers: 458
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4307
  bin: 7.5e0
  variant carriers: 715
genotype depth: GenotypeDepth
  all individuals: 4284
  bin: 3.25e1
  variant carriers: 96
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1554
  bin: 4.25e1
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 10958
  bin: 1.25e1
  variant carriers: 1324
genotype depth: GenotypeDepth
  all individuals: 2241
  bin: 3.75e1
  variant carriers: 50
genotype depth: GenotypeDepth
  all individuals: 674
  bin: 5.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 1026
  bin: 4.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 6.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 6.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 15627
  bin: 2.25e1
  variant carriers: 83
genotype quality: GenotypeQuality
  all individuals: 3827
  bin: 7.5e0
  variant carriers: 91
genotype quality: GenotypeQuality
  all individuals: 303
  bin: 9.25e1
  variant carriers: 93
genotype quality: GenotypeQuality
  all individuals: 1574
  bin: 1.75e1
  variant carriers: 59
genotype quality: GenotypeQuality
  all individuals: 1605
  bin: 1.25e1
  variant carriers: 71
genotype quality: GenotypeQuality
  all individuals: 4170
  bin: 2.75e1
  variant carriers: 79
genotype quality: GenotypeQuality
  all individuals: 602
  bin: 7.25e1
  variant carriers: 64
genotype quality: GenotypeQuality
  all individuals: 1940
  bin: 3.75e1
  variant carriers: 67
num of homozygotes: 123
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: Other
reference allele: T
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: MQ

6-146480771-T-TCA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 146480771
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 146480773
    reference: chr 6
allele count: 19
allele frequency: 2.312898670691922e-4
allele num: 82148
alternate allele: TCA
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000152822
  ensembl transcript: ENST00000502405
  gene symbol: GRM1
  hgvsc: ENST00000502405.1:n.1399_1400insAC
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000425599
  ensembl transcript: ENST00000507907
  gene symbol: GRM1
  hgvsc: ENST00000507907.1:c.950+39_950+40insAC
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000152822
  ensembl transcript: ENST00000507005
  gene symbol: GRM1
  hgvsc: ENST00000507005.1:n.1459_1460insAC
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000282753
  ensembl transcript: ENST00000282753
  gene symbol: GRM1
  hgvsc: ENST00000282753.1:c.950+39_950+40insAC
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000354896
  ensembl transcript: ENST00000361719
  gene symbol: GRM1
  hgvsc: ENST00000361719.2:c.950+39_950+40insAC
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000376119
  ensembl transcript: ENST00000392299
  gene symbol: GRM1
  hgvsc: ENST00000392299.2:c.950+39_950+40insAC
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000424095
  ensembl transcript: ENST00000492807
  gene symbol: GRM1
  hgvsc: ENST00000492807.2:c.950+39_950+40insAC
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000347437
  ensembl transcript: ENST00000355289
  gene symbol: GRM1
  hgvsc: ENST00000355289.4:c.950+39_950+40insAC
  variant of: http://identifiers.org/hgnc/4593
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 6930
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10958
  bin: 1.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 674
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2241
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4284
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4307
  bin: 7.5e0
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1554
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15232
  bin: 1.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10466
  bin: 2.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1026
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15627
  bin: 2.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 618
  bin: 7.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3711
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1574
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 841
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 271
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4170
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1377
  bin: 6.75e1
  variant carriers: 1
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
reference allele: T
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ

6-146480771-TCTCTCTCA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 146480771
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 146480763
    reference: chr 6
allele count: 32
allele frequency: 3.895408287481132e-4
allele num: 82148
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000425599
  ensembl transcript: ENST00000507907
  gene symbol: GRM1
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000282753
  ensembl transcript: ENST00000282753
  gene symbol: GRM1
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000376119
  ensembl transcript: ENST00000392299
  gene symbol: GRM1
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000152822
  ensembl transcript: ENST00000507005
  gene symbol: GRM1
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000354896
  ensembl transcript: ENST00000361719
  gene symbol: GRM1
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000152822
  ensembl transcript: ENST00000502405
  gene symbol: GRM1
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000347437
  ensembl transcript: ENST00000355289
  gene symbol: GRM1
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000424095
  ensembl transcript: ENST00000492807
  gene symbol: GRM1
  variant of: http://identifiers.org/hgnc/4593
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 1026
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6930
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 10466
  bin: 2.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 1554
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2241
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4307
  bin: 7.5e0
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 674
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4284
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10958
  bin: 1.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15232
  bin: 1.75e1
  variant carriers: 18
genotype quality: GenotypeQuality
  all individuals: 1574
  bin: 1.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 926
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 602
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 841
  bin: 4.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3181
  bin: 9.75e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 15627
  bin: 2.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1605
  bin: 1.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 3711
  bin: 3.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 271
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1377
  bin: 6.75e1
  variant carriers: 2
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
reference allele: TCTCTCTCA
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: InbreedingCoeff

6-146480771-TCTCTCTCACA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 146480771
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 146480761
    reference: chr 6
allele count: 5
allele frequency: 6.086575449189268e-5
allele num: 82148
alternate allele: T
canonical: false
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 1554
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4284
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15232
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10958
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10466
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 674
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2241
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6930
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4307
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1026
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3181
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1377
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 926
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9576
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 602
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4170
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 679
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7634
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 303
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 841
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 618
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3711
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1940
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1574
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3827
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 15627
  bin: 2.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 403
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 271
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 638
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1605
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 12206
  num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 4608
  num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 45520
  num of homozygotes: 0
population: African
  type: Population
  allele count: 5
  allele frequency: 8.291873963515755e-4
  allele num: 6030
  num of homozygotes: 0
population: Other
population: East Asian
population: Latino
reference allele: TCTCTCTCACA
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: MQ

6-146480773-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 146480773
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 146480773
    reference: chr 6
allele count: 5964
allele frequency: 7.75008446604465e-2
allele num: 76954
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000425599
  ensembl transcript: ENST00000507907
  gene symbol: GRM1
  hgvsc: ENST00000507907.1:c.950+40T>A
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000354896
  ensembl transcript: ENST00000361719
  gene symbol: GRM1
  hgvsc: ENST00000361719.2:c.950+40T>A
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000347437
  ensembl transcript: ENST00000355289
  gene symbol: GRM1
  hgvsc: ENST00000355289.4:c.950+40T>A
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000376119
  ensembl transcript: ENST00000392299
  gene symbol: GRM1
  hgvsc: ENST00000392299.2:c.950+40T>A
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000282753
  ensembl transcript: ENST00000282753
  gene symbol: GRM1
  hgvsc: ENST00000282753.1:c.950+40T>A
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000152822
  ensembl transcript: ENST00000502405
  gene symbol: GRM1
  hgvsc: ENST00000502405.1:n.1400T>A
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000152822
  ensembl transcript: ENST00000507005
  gene symbol: GRM1
  hgvsc: ENST00000507005.1:n.1460T>A
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000424095
  ensembl transcript: ENST00000492807
  gene symbol: GRM1
  hgvsc: ENST00000492807.2:c.950+40T>A
  variant of: http://identifiers.org/hgnc/4593
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 900
  bin: 4.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1307
  bin: 4.25e1
  variant carriers: 43
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2006
  bin: 3.75e1
  variant carriers: 97
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 5.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 12148
  bin: 1.25e1
  variant carriers: 2550
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 5319
  bin: 7.5e0
  variant carriers: 1461
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 2.5e0
  variant carriers: 188
genotype depth: GenotypeDepth
  all individuals: 556
  bin: 5.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 15304
  bin: 1.75e1
  variant carriers: 1775
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 6.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 6284
  bin: 2.75e1
  variant carriers: 368
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3616
  bin: 3.25e1
  variant carriers: 156
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9864
  bin: 2.25e1
  variant carriers: 895
genotype quality: GenotypeQuality
  all individuals: 1930
  bin: 1.25e1
  variant carriers: 162
genotype quality: GenotypeQuality
  all individuals: 5352
  bin: 9.75e1
  variant carriers: 4657
genotype quality: GenotypeQuality
  all individuals: 10783
  bin: 2.5e0
  variant carriers: 144
genotype quality: GenotypeQuality
  all individuals: 1079
  bin: 4.75e1
  variant carriers: 153
genotype quality: GenotypeQuality
  all individuals: 5873
  bin: 6.25e1
  variant carriers: 142
genotype quality: GenotypeQuality
  all individuals: 717
  bin: 7.75e1
  variant carriers: 167
genotype quality: GenotypeQuality
  all individuals: 1157
  bin: 4.25e1
  variant carriers: 162
genotype quality: GenotypeQuality
  all individuals: 485
  bin: 8.25e1
  variant carriers: 160
num of homozygotes: 225
population: African
population: Latino
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: InbreedingCoeff

6-146480773-T-TCA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 146480773
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 146480775
    reference: chr 6
allele count: 8
allele frequency: 1.039582088000624e-4
allele num: 76954
alternate allele: TCA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000425599
  ensembl transcript: ENST00000507907
  gene symbol: GRM1
  hgvsc: ENST00000507907.1:c.950+41_950+42insAC
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000152822
  ensembl transcript: ENST00000502405
  gene symbol: GRM1
  hgvsc: ENST00000502405.1:n.1401_1402insAC
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000282753
  ensembl transcript: ENST00000282753
  gene symbol: GRM1
  hgvsc: ENST00000282753.1:c.950+41_950+42insAC
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000376119
  ensembl transcript: ENST00000392299
  gene symbol: GRM1
  hgvsc: ENST00000392299.2:c.950+41_950+42insAC
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000152822
  ensembl transcript: ENST00000507005
  gene symbol: GRM1
  hgvsc: ENST00000507005.1:n.1461_1462insAC
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000424095
  ensembl transcript: ENST00000492807
  gene symbol: GRM1
  hgvsc: ENST00000492807.2:c.950+41_950+42insAC
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000347437
  ensembl transcript: ENST00000355289
  gene symbol: GRM1
  hgvsc: ENST00000355289.4:c.950+41_950+42insAC
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000354896
  ensembl transcript: ENST00000361719
  gene symbol: GRM1
  hgvsc: ENST00000361719.2:c.950+41_950+42insAC
  variant of: http://identifiers.org/hgnc/4593
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 3616
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 2.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2006
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 556
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12148
  bin: 1.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 15304
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1307
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 900
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9864
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5319
  bin: 7.5e0
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6284
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12427
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1079
  bin: 4.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3835
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 999
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 485
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1930
  bin: 1.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 10783
  bin: 2.5e0
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 5873
  bin: 6.25e1
  variant carriers: 1
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
reference allele: T
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ

6-146480773-T-TCACA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 146480773
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 146480777
    reference: chr 6
allele count: 48
allele frequency: 6.237492528003742e-4
allele num: 76954
alternate allele: TCACA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000282753
  ensembl transcript: ENST00000282753
  gene symbol: GRM1
  hgvsc: ENST00000282753.1:c.950+41_950+42insACAC
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000425599
  ensembl transcript: ENST00000507907
  gene symbol: GRM1
  hgvsc: ENST00000507907.1:c.950+41_950+42insACAC
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000347437
  ensembl transcript: ENST00000355289
  gene symbol: GRM1
  hgvsc: ENST00000355289.4:c.950+41_950+42insACAC
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000152822
  ensembl transcript: ENST00000507005
  gene symbol: GRM1
  hgvsc: ENST00000507005.1:n.1461_1462insACAC
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000424095
  ensembl transcript: ENST00000492807
  gene symbol: GRM1
  hgvsc: ENST00000492807.2:c.950+41_950+42insACAC
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000152822
  ensembl transcript: ENST00000502405
  gene symbol: GRM1
  hgvsc: ENST00000502405.1:n.1401_1402insACAC
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000376119
  ensembl transcript: ENST00000392299
  gene symbol: GRM1
  hgvsc: ENST00000392299.2:c.950+41_950+42insACAC
  variant of: http://identifiers.org/hgnc/4593
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000152822
  ensembl protein: ENSP00000354896
  ensembl transcript: ENST00000361719
  gene symbol: GRM1
  hgvsc: ENST00000361719.2:c.950+41_950+42insACAC
  variant of: http://identifiers.org/hgnc/4593
canonical: false
consequence: non coding transcript exon
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 6284
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5319
  bin: 7.5e0
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 2006
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9864
  bin: 2.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12148
  bin: 1.25e1
  variant carriers: 42
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 2.5e0
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 900
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3616
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15304
  bin: 1.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 556
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1307
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.75e1
  variant carriers: 0
num of homozygotes: 0
reference allele: T

GenotypeQuality
all individuals: 50445
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1156
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1431
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 25
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11478
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16412
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9362
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.169317118802619e-4
allele num: 8552
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65542
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.966e1

FS
type: SiteQuality
SIO_000300: 6.476e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.54e0

VQSLOD
type: SiteQuality
SIO_000300: 5.49e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.88e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 7.34e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.826e0

DP
type: SiteQuality
SIO_000300: 1.441482e6

QD
type: SiteQuality
SIO_000300: 1.217e1

GenotypeQuality
all individuals: 24
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 90
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3990
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11474
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16410
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 4.27715996578272e-4
allele num: 9352
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65462
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8544
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.95e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

MQ
type: SiteQuality
SIO_000300: 5.972e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.0e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.67e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.65e-1

QD
type: SiteQuality
SIO_000300: 1.422e1

MQRankSum
type: SiteQuality
SIO_000300: -5.21e-1

DP
type: SiteQuality
SIO_000300: 1.440817e6

GenotypeQuality
all individuals: 44
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.613823013749193e-5
allele num: 65022
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9238
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8530
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11466
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16270
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.04e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.64e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.2e-2

FS
type: SiteQuality
SIO_000300: 5.26e-1

DP
type: SiteQuality
SIO_000300: 1.432236e6

MQ
type: SiteQuality
SIO_000300: 5.973e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.6e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

QD
type: SiteQuality
SIO_000300: 1.376e1

VQSLOD
type: SiteQuality
SIO_000300: 1.09e0

GenotypeQuality
all individuals: 219
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 322
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49579
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9188
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8522
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11452
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16136
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.543066999969139e-5
allele num: 64806
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.378e0

DP
type: SiteQuality
SIO_000300: 1.427416e6

MQ
type: SiteQuality
SIO_000300: 5.736e1

FS
type: SiteQuality
SIO_000300: 6.336e0

VQSLOD
type: SiteQuality
SIO_000300: -2.762e0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.28e-1

QD
type: SiteQuality
SIO_000300: 3.156e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

MQRankSum
type: SiteQuality
SIO_000300: -5.89e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.699999999999999e-2

GenotypeQuality
all individuals: 3910
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
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variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.548850752741466e-5
allele num: 64564
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15940
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8516
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11448
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9144
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.421342e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.6e-2

MQ
type: SiteQuality
SIO_000300: 5.964e1

FS
type: SiteQuality
SIO_000300: 3.931e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.7e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.51e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.03e0

MQRankSum
type: SiteQuality
SIO_000300: 9.5e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.6e-3

QD
type: SiteQuality
SIO_000300: 1.418e1

GenotypeQuality
all individuals: 323
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 805
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 514
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3867
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8506
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.742787200559538e-5
allele num: 11438
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15472
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64066
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9072
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.31e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.32e-1

MQ
type: SiteQuality
SIO_000300: 5.888e1

QD
type: SiteQuality
SIO_000300: 2.371e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.6e-3

DP
type: SiteQuality
SIO_000300: 1.404997e6

FS
type: SiteQuality
SIO_000300: 3.593e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.62e0

VQSLOD
type: SiteQuality
SIO_000300: -2.664e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.31e-1

GenotypeQuality
all individuals: 47029
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 80
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variant carriers: 0

GenotypeQuality
all individuals: 791
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 318
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11426
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.177024482109228e-4
allele num: 8496
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 840
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63774
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9010
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15052
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.73e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -3.898e-1

FS
type: SiteQuality
SIO_000300: 9.91e0

MQRankSum
type: SiteQuality
SIO_000300: 4.72e-1

DP
type: SiteQuality
SIO_000300: 1.393288e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.27e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.27e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.6e-3

QD
type: SiteQuality
SIO_000300: 1.096e1

GenotypeQuality
all individuals: 216
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 319
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8492
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.728132387706856e-5
allele num: 63450
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8946
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14552
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11414
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.196172248803828e-3
allele num: 836
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.32e0

QD
type: SiteQuality
SIO_000300: 1.149e1

FS
type: SiteQuality
SIO_000300: 6.12e-1

MQ
type: SiteQuality
SIO_000300: 5.953e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.3e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.85e0

MQRankSum
type: SiteQuality
SIO_000300: 3.66e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.7e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

DP
type: SiteQuality
SIO_000300: 1.382584e6

GenotypeQuality
all individuals: 1434
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 216
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 749
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 319
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8488
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11412
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.379310344827586e-4
allele num: 14500
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8926
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 836
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.310143555765894e-5
allele num: 63390
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.51e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.8e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.41e-1

QD
type: SiteQuality
SIO_000300: 1.018e1

VQSLOD
type: SiteQuality
SIO_000300: -8.851e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

FS
type: SiteQuality
SIO_000300: 1.0691e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.03e-1

DP
type: SiteQuality
SIO_000300: 1.379466e6

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1429
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 78
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 511
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.578531965272297e-5
allele num: 63350
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8916
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14448
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8486
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11404
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 836
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.357e1

MQRankSum
type: SiteQuality
SIO_000300: -5.45e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 8.81e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.014e0

DP
type: SiteQuality
SIO_000300: 1.37688e6

MQ
type: SiteQuality
SIO_000300: 5.97e1

FS
type: SiteQuality
SIO_000300: 3.46e0

VQSLOD
type: SiteQuality
SIO_000300: 9.21e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.78e-1

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 342
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 510
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63200
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 832
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14224
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8900
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.770391159445712e-5
allele num: 11402
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8480
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.28e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.23e-1

MQ
type: SiteQuality
SIO_000300: 5.951e1

VQSLOD
type: SiteQuality
SIO_000300: 8.94e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

FS
type: SiteQuality
SIO_000300: 2.944e0

MQRankSum
type: SiteQuality
SIO_000300: 5.01e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.41e-1

DP
type: SiteQuality
SIO_000300: 1.370908e6

QD
type: SiteQuality
SIO_000300: 1.215e1

GenotypeQuality
all individuals: 137
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 318
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 5.25e1
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GenotypeQuality
all individuals: 53
bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8476
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14098
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11396
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8856
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.586344744439862e-5
allele num: 63038
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 828
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.65e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.78e0

FS
type: SiteQuality
SIO_000300: 2.443e0

VQSLOD
type: SiteQuality
SIO_000300: -7.5e-3

MQ
type: SiteQuality
SIO_000300: 5.938e1

DP
type: SiteQuality
SIO_000300: 1.363707e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 4.38e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.41e-1

QD
type: SiteQuality
SIO_000300: 8.77e0

GenotypeQuality
all individuals: 462
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variant carriers: 0

GenotypeQuality
all individuals: 706
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 4.25e1
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GenotypeQuality
all individuals: 214
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8358
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8552
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.625117821042025e-5
allele num: 61534
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 810
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11352
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12712
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.47e0

FS
type: SiteQuality
SIO_000300: 2.561e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.3e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -9.61e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.026e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.322095e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.46e-1

QD
type: SiteQuality
SIO_000300: 4.15e0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 291
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 57548
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7764
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.273560876209883e-4
allele num: 7852
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6520
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11174
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 748
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9668
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.06e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.5e-3

MQRankSum
type: SiteQuality
SIO_000300: -9.429999999999999e-1

DP
type: SiteQuality
SIO_000300: 1.166685e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.06e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.28e0

MQ
type: SiteQuality
SIO_000300: 5.948e1

QD
type: SiteQuality
SIO_000300: 1.689e1

VQSLOD
type: SiteQuality
SIO_000300: -2.421e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 210
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11030
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.357220412595005e-4
allele num: 7368
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 720
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 54740
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8384
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 7304
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6458
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.507e0

VQSLOD
type: SiteQuality
SIO_000300: -2.261e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
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SIO_000300: 1.5e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.8e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.813e0

MQRankSum
type: SiteQuality
SIO_000300: -2.7e-1

QD
type: SiteQuality
SIO_000300: 6.14e0

DP
type: SiteQuality
SIO_000300: 1.047753e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 54480
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7234
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11028
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8246
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.743484224965707e-4
allele num: 7290
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6460
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 714
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.8e-3

MQRankSum
type: SiteQuality
SIO_000300: -1.001e0

MQ
type: SiteQuality
SIO_000300: 5.636e1

QD
type: SiteQuality
SIO_000300: 1.522e1

VQSLOD
type: SiteQuality
SIO_000300: 3.7e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.48e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.73e-1

DP
type: SiteQuality
SIO_000300: 1.035993e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15766
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11322
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8394
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6538
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.548179341094872e-5
allele num: 64592
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9592
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -5.52e-1

DP
type: SiteQuality
SIO_000300: 1.412435e6

MQ
type: SiteQuality
SIO_000300: 5.969e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.62e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.822e0

QD
type: SiteQuality
SIO_000300: 2.103e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.14e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.53e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.02e0

GenotypeQuality
all individuals: 1574
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 384
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variant carriers: 0

GenotypeQuality
all individuals: 615
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.795074758135444e-5
allele num: 11370
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 874
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15940
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8466
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64970
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6548
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9640
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.133e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.8e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.2e-2

DP
type: SiteQuality
SIO_000300: 1.47715e6

VQSLOD
type: SiteQuality
SIO_000300: 3.4e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.2e-1

MQ
type: SiteQuality
SIO_000300: 5.906e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.2e-2

FS
type: SiteQuality
SIO_000300: 2.183e0

QD
type: SiteQuality
SIO_000300: 1.286e1

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2074
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 1
allele frequency: 8.784258608573436e-5
allele num: 11384
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8496
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6550
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65094
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15990
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.4e-3

VQSLOD
type: SiteQuality
SIO_000300: 3.81e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.25e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.87e-1

QD
type: SiteQuality
SIO_000300: 1.374e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.04e-1

DP
type: SiteQuality
SIO_000300: 1.493722e6

BaseQRankSum
type: SiteQuality
SIO_000300: 4.16e0

GenotypeQuality
all individuals: 963
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 332
bin: 2.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65704
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8552
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.726003490401397e-5
allele num: 11460
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6568
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.131221719457014e-3
allele num: 884
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16218
num of homozygotes: 0

African
type: Population
allele count: 20
allele frequency: 2.058036633052068e-3
allele num: 9718
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

QD
type: SiteQuality
SIO_000300: 1.131e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 2.71e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.946e0

VQSLOD
type: SiteQuality
SIO_000300: 5.61e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.01e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.01e-1

MQ
type: SiteQuality
SIO_000300: 5.98e1

DP
type: SiteQuality
SIO_000300: 1.531507e6

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2106
bin: 9.75e1
variant carriers: 41

GenotypeQuality
all individuals: 524
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 41
allele frequency: 3.577037166288606e-3
allele num: 11462
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6574
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8558
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9728
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65772
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16246
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.04e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -2.14e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.83e0

FS
type: SiteQuality
SIO_000300: 6.4e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.43e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.168e1

DP
type: SiteQuality
SIO_000300: 1.535846e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.52e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499205421126803e-5
allele num: 66702
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.157e0

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 5.047e0

MQRankSum
type: SiteQuality
SIO_000300: -1.145e0

DP
type: SiteQuality
SIO_000300: 2.484423e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.27e0

MQ
type: SiteQuality
SIO_000300: 5.758e1

QD
type: SiteQuality
SIO_000300: 1.532e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.598e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.158748551564311e-4
allele num: 8630
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66700
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.853e1

QD
type: SiteQuality
SIO_000300: 6.9e0

FS
type: SiteQuality
SIO_000300: 1.1677e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

DP
type: SiteQuality
SIO_000300: 2.484481e6

VQSLOD
type: SiteQuality
SIO_000300: -1.768e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.75e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.54e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.38e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.25e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 21
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GenotypeQuality
all individuals: 1917
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66700
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.624639076034648e-5
allele num: 10390
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.29e-1

QD
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: 2.87e-1

MQRankSum
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FS
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.897e1

ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
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DP
type: SiteQuality
SIO_000300: 2.483214e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3738
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.49934029027228e-5
allele num: 66696
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 4.06e-1

FS
type: SiteQuality
SIO_000300: 1.091e0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.58e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.39e0

MQ
type: SiteQuality
SIO_000300: 5.781e1

DP
type: SiteQuality
SIO_000300: 2.481786e6

QD
type: SiteQuality
SIO_000300: 8.84e0

VQSLOD
type: SiteQuality
SIO_000300: -2.684e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.217e0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 50
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66704
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.843e0

DP
type: SiteQuality
SIO_000300: 2.481482e6

MQRankSum
type: SiteQuality
SIO_000300: 2.3e-1

MQ
type: SiteQuality
SIO_000300: 5.977e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.39e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.609e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.78e0

VQSLOD
type: SiteQuality
SIO_000300: 8.67e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.186e1

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 3.25e1
variant carriers: 0

Latino
type: Population
allele count: 2
allele frequency: 1.728907330567082e-4
allele num: 11568
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66694
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 68
allele frequency: 6.547275178124398e-3
allele num: 10386
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.99e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.74e0

MQRankSum
type: SiteQuality
SIO_000300: 3.68e-1

DP
type: SiteQuality
SIO_000300: 2.482756e6

QD
type: SiteQuality
SIO_000300: 1.303e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.36e-1

FS
type: SiteQuality
SIO_000300: 5.21e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.19e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.384e0

MQ
type: SiteQuality
SIO_000300: 5.789e1

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499430216517723e-5
allele num: 66692
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.278e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.000000000000001e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.141e0

VQSLOD
type: SiteQuality
SIO_000300: -1.131e0

DP
type: SiteQuality
SIO_000300: 2.479564e6

MQ
type: SiteQuality
SIO_000300: 5.855e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 9.16e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.68e-1

GenotypeQuality
all individuals: 4550
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 136
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GenotypeQuality
all individuals: 922
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9744
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8570
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.710801393728223e-5
allele num: 11480
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16348
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66020
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 6.78e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.76e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.49e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.513e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.67e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 6.52e-1

DP
type: SiteQuality
SIO_000300: 1.545561e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 325
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variant carriers: 0

GenotypeQuality
all individuals: 211
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GenotypeQuality
all individuals: 46
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variant carriers: 0

GenotypeQuality
all individuals: 2066
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11500
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8582
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.511990081345066e-5
allele num: 66138
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9760
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16392
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.92e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.05e0

QD
type: SiteQuality
SIO_000300: 1.427e1

VQSLOD
type: SiteQuality
SIO_000300: -4.281e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.53e-1

MQ
type: SiteQuality
SIO_000300: 5.955e1

MQRankSum
type: SiteQuality
SIO_000300: -3.8e-2

DP
type: SiteQuality
SIO_000300: 1.548895e6

FS
type: SiteQuality
SIO_000300: 9.050000000000001e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2069
bin: 9.75e1
variant carriers: 4

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.510710940568632e-5
allele num: 66194
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11502
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8590
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9762
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.828376401755241e-4
allele num: 16408
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.925e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 6.2e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.39e0

MQRankSum
type: SiteQuality
SIO_000300: -3.29e-1

QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: -2.48e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.06e-1

BaseQRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.550935e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10372
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66684
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.91e1

DP
type: SiteQuality
SIO_000300: 2.479211e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.89e0

QD
type: SiteQuality
SIO_000300: 1.354e1

MQRankSum
type: SiteQuality
SIO_000300: 1.19e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.01e0

FS
type: SiteQuality
SIO_000300: 3.081e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.052e0

VQSLOD
type: SiteQuality
SIO_000300: 1.4e-1

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

South Asian
type: Population
allele count: 2
allele frequency: 1.211240310077519e-4
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66668
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.012e1

FS
type: SiteQuality
SIO_000300: 6.81e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.83e0

MQ
type: SiteQuality
SIO_000300: 5.84e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: 1.84e0

MQRankSum
type: SiteQuality
SIO_000300: 1.8e0

DP
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.86e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 11028
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 5
allele frequency: 4.323015735777278e-4
allele num: 11566
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10354
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66650
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.98e-1

MQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.119e0

DP
type: SiteQuality
SIO_000300: 2.47752e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 6.94e-1

QD
type: SiteQuality
SIO_000300: 1.23e1

MQ
type: SiteQuality
SIO_000300: 5.82e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.507e0

VQSLOD
type: SiteQuality
SIO_000300: -1.86e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3715
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 3.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66630
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10348
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.548e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.02e0

DP
type: SiteQuality
SIO_000300: 2.476384e6

MQ
type: SiteQuality
SIO_000300: 5.964e1

QD
type: SiteQuality
SIO_000300: 1.017e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -2.273e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.0e-2

MQRankSum
type: SiteQuality
SIO_000300: -1.081e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.885e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66598
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10330
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.058403004967891e-5
allele num: 16506
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.473306e6

BaseQRankSum
type: SiteQuality
SIO_000300: -9.52e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.069e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 3.81e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.0e-2

MQ
type: SiteQuality
SIO_000300: 5.746e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.2e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.709e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.731301939058172e-4
allele num: 11552
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66586
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10330
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.416e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -4.1e-2

MQ
type: SiteQuality
SIO_000300: 5.851e1

DP
type: SiteQuality
SIO_000300: 2.470926e6

FS
type: SiteQuality
SIO_000300: 2.328e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.393e0

MQRankSum
type: SiteQuality
SIO_000300: 1.26e0

VQSLOD
type: SiteQuality
SIO_000300: -1.609e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.29e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 150
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503262078710802e-5
allele num: 66522
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10316
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.71e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.03e-1

MQ
type: SiteQuality
SIO_000300: 5.775e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

DP
type: SiteQuality
SIO_000300: 2.462385e6

VQSLOD
type: SiteQuality
SIO_000300: -5.443e-1

FS
type: SiteQuality
SIO_000300: 9.17e-1

QD
type: SiteQuality
SIO_000300: 1.141e1

MQRankSum
type: SiteQuality
SIO_000300: 2.8e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 2.34e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10316
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.509786236132407e-5
allele num: 66522
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.8e-2

FS
type: SiteQuality
SIO_000300: 9.17e-1

QD
type: SiteQuality
SIO_000300: 1.141e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

DP
type: SiteQuality
SIO_000300: 2.462385e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.34e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.71e-1

MQ
type: SiteQuality
SIO_000300: 5.775e1

VQSLOD
type: SiteQuality
SIO_000300: -5.443e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.03e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 1
allele frequency: 6.06060606060606e-5
allele num: 16500
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.938735944164405e-4
allele num: 10316
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66522
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -2.03e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.71e-1

VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 9.17e-1

MQ
type: SiteQuality
SIO_000300: 5.775e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

DP
type: SiteQuality
SIO_000300: 2.462385e6

MQRankSum
type: SiteQuality
SIO_000300: 2.8e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 81
allele frequency: 7.853403141361256e-3
allele num: 10314
num of homozygotes: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.732201628269531e-4
allele num: 11546
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.006524157421605e-5
allele num: 66522
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
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ReadPosRankSum
type: SiteQuality
SIO_000300: 2.98e-1

MQRankSum
type: SiteQuality
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QD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 2.46253e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.48e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.39e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.33e-2

FS
type: SiteQuality
SIO_000300: 1.341e0

MQ
type: SiteQuality
SIO_000300: 5.83e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.86e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66498
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
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African
type: Population
allele count: 1
allele frequency: 9.701202949165696e-5
allele num: 10308
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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South Asian
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allele num: 16500
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MQ
type: SiteQuality
SIO_000300: 5.571e1

QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 2.457594e6

MQRankSum
type: SiteQuality
SIO_000300: -6.0e-3

ReadPosRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 3.04e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.779e0

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 93
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GenotypeQuality
all individuals: 14
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3603
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 10665
bin: 6.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66450
num of homozygotes: 0

East Asian
type: Population
allele count: 20
allele frequency: 2.334267040149393e-3
allele num: 8568
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10298
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 7.0e-1

FS
type: SiteQuality
SIO_000300: 4.354e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.12e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

MQ
type: SiteQuality
SIO_000300: 5.895e1

MQRankSum
type: SiteQuality
SIO_000300: 3.03e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.37e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.15e-1

DP
type: SiteQuality
SIO_000300: 2.450441e6

QD
type: SiteQuality
SIO_000300: 1.13e1

GenotypeQuality
all individuals: 25515
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1361
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1420
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4293
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 238
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1881
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3593
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10296
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.009328919650918e-5
allele num: 66460
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8574
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.65e-1

DP
type: SiteQuality
SIO_000300: 2.449415e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.067e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

QD
type: SiteQuality
SIO_000300: 1.075e1

MQRankSum
type: SiteQuality
SIO_000300: 2.71e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -6.835e-1

MQ
type: SiteQuality
SIO_000300: 5.76e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.64e-1

GenotypeQuality
all individuals: 326
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3999
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4583
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 755
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5658
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2827
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2164
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3951
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 870
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2250
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9494
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2035
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1295
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10874
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9394
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15740
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8000
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.625223468226881e-5
allele num: 61530
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 796
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5974
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.14e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.15e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 2.23e-1

DP
type: SiteQuality
SIO_000300: 2.288092e6

QD
type: SiteQuality
SIO_000300: 1.113e1

FS
type: SiteQuality
SIO_000300: 2.366e0

MQRankSum
type: SiteQuality
SIO_000300: -1.214e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.692e0

MQ
type: SiteQuality
SIO_000300: 5.675e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.3e-2

GenotypeQuality
all individuals: 1375
bin: 7.75e1
variant carriers: 902

GenotypeQuality
all individuals: 2675
bin: 1.25e1
variant carriers: 1396

GenotypeQuality
all individuals: 1971
bin: 3.75e1
variant carriers: 819

GenotypeQuality
all individuals: 3398
bin: 2.25e1
variant carriers: 1829

GenotypeQuality
all individuals: 2368
bin: 3.25e1
variant carriers: 1041

GenotypeQuality
all individuals: 3007
bin: 1.75e1
variant carriers: 1841

GenotypeQuality
all individuals: 1305
bin: 6.75e1
variant carriers: 660

GenotypeQuality
all individuals: 1349
bin: 5.75e1
variant carriers: 736

GenotypeQuality
all individuals: 890
bin: 9.25e1
variant carriers: 546

GenotypeQuality
all individuals: 1737
bin: 6.25e1
variant carriers: 768

GenotypeQuality
all individuals: 1190
bin: 8.25e1
variant carriers: 785

GenotypeQuality
all individuals: 1123
bin: 7.25e1
variant carriers: 657

Latino
type: Population
allele count: 1032
allele frequency: 2.283185840707965e-1
allele num: 4520
num of homozygotes: 42

East Asian
type: Population
allele count: 820
allele frequency: 2.489374620522161e-1
allele num: 3294
num of homozygotes: 44

European (Non-Finnish)
type: Population
allele count: 7175
allele frequency: 2.246962294876613e-1
allele num: 31932
num of homozygotes: 321

European (Finnish)
type: Population
allele count: 557
allele frequency: 2.338371116708648e-1
allele num: 2382
num of homozygotes: 39

South Asian
type: Population
allele count: 2400
allele frequency: 2.600216684723727e-1
allele num: 9230
num of homozygotes: 61

African
type: Population
allele count: 307
allele frequency: 5.175320296695887e-2
allele num: 5932
num of homozygotes: 2

Other
type: Population
allele count: 110
allele frequency: 2.558139534883721e-1
allele num: 430
num of homozygotes: 4

MQ
type: SiteQuality
SIO_000300: 5.634e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.482e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.370000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.37e0

MQRankSum
type: SiteQuality
SIO_000300: -4.74e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.33e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.89e-1

DP
type: SiteQuality
SIO_000300: 9.96204e5

QD
type: SiteQuality
SIO_000300: 8.960000000000001e0

European (Finnish)
type: Population
allele count: 235
allele frequency: 9.865659109991604e-2
allele num: 2382
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4001
allele frequency: 1.25297507202806e-1
allele num: 31932
num of homozygotes: 9

Other
type: Population
allele count: 74
allele frequency: 1.72093023255814e-1
allele num: 430
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.89e-1

MQ
type: SiteQuality
SIO_000300: 5.634e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.370000000000001e-1

DP
type: SiteQuality
SIO_000300: 9.96204e5

QD
type: SiteQuality
SIO_000300: 8.960000000000001e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.482e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.33e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.37e0

MQRankSum
type: SiteQuality
SIO_000300: -4.74e-1

Other
type: Population
allele count: 16
allele frequency: 3.720930232558139e-2
allele num: 430
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 170
allele frequency: 7.136859781696053e-2
allele num: 2382
num of homozygotes: 2

Latino
type: Population
allele count: 133
allele frequency: 2.942477876106195e-2
allele num: 4520
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 9.96204e5

BaseQRankSum
type: SiteQuality
SIO_000300: 1.33e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.370000000000001e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.482e-1

QD
type: SiteQuality
SIO_000300: 8.960000000000001e0

MQRankSum
type: SiteQuality
SIO_000300: -4.74e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.37e0

MQ
type: SiteQuality
SIO_000300: 5.634e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.89e-1

GenotypeQuality
all individuals: 3007
bin: 1.75e1
variant carriers: 167

GenotypeQuality
all individuals: 12369
bin: 2.5e0
variant carriers: 1555

GenotypeQuality
all individuals: 1129
bin: 8.75e1
variant carriers: 304

GenotypeQuality
all individuals: 14122
bin: 9.75e1
variant carriers: 6101

GenotypeQuality
all individuals: 1737
bin: 6.25e1
variant carriers: 211

GenotypeQuality
all individuals: 3398
bin: 2.25e1
variant carriers: 182

GenotypeQuality
all individuals: 1305
bin: 6.75e1
variant carriers: 217

GenotypeQuality
all individuals: 1190
bin: 8.25e1
variant carriers: 234

GenotypeQuality
all individuals: 1123
bin: 7.25e1
variant carriers: 193

GenotypeQuality
all individuals: 1467
bin: 4.25e1
variant carriers: 180

Other
type: Population
allele count: 56
allele frequency: 1.302325581395349e-1
allele num: 430
num of homozygotes: 1

Latino
type: Population
allele count: 340
allele frequency: 7.52212389380531e-2
allele num: 4520
num of homozygotes: 2

East Asian
type: Population
allele count: 370
allele frequency: 1.123254401942927e-1
allele num: 3294
num of homozygotes: 3

African
type: Population
allele count: 162
allele frequency: 2.730950775455158e-2
allele num: 5932
num of homozygotes: 1

South Asian
type: Population
allele count: 1542
allele frequency: 1.670639219934995e-1
allele num: 9230
num of homozygotes: 22

European (Non-Finnish)
type: Population
allele count: 5312
allele frequency: 1.663535011900288e-1
allele num: 31932
num of homozygotes: 103

European (Finnish)
type: Population
allele count: 381
allele frequency: 1.599496221662469e-1
allele num: 2382
num of homozygotes: 6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.33e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.37e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.89e-1

MQ
type: SiteQuality
SIO_000300: 5.634e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.482e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.74e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.370000000000001e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 8.960000000000001e0

DP
type: SiteQuality
SIO_000300: 9.96204e5

European (Non-Finnish)
type: Population
allele count: 678
allele frequency: 2.12326193160466e-2
allele num: 31932
num of homozygotes: 1

Latino
type: Population
allele count: 71
allele frequency: 1.570796460176991e-2
allele num: 4520
num of homozygotes: 0

African
type: Population
allele count: 19
allele frequency: 3.202966958867161e-3
allele num: 5932
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.89e-1

MQ
type: SiteQuality
SIO_000300: 5.634e1

MQRankSum
type: SiteQuality
SIO_000300: -4.74e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.482e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.37e0

QD
type: SiteQuality
SIO_000300: 8.960000000000001e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.33e-1

DP
type: SiteQuality
SIO_000300: 9.96204e5

ClippingRankSum
type: SiteQuality
SIO_000300: -9.370000000000001e-1

Other
type: Population
allele count: 5
allele frequency: 1.162790697674419e-2
allele num: 430
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 9.107468123861566e-4
allele num: 3294
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 82
allele frequency: 2.567956908430415e-3
allele num: 31932
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 6.37e0

DP
type: SiteQuality
SIO_000300: 9.96204e5

MQ
type: SiteQuality
SIO_000300: 5.634e1

MQRankSum
type: SiteQuality
SIO_000300: -4.74e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.89e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.33e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.482e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.370000000000001e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 8.960000000000001e0

GenotypeQuality
all individuals: 1460
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 307
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1009
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5104
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 343
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 40
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.012145748987854e-3
allele num: 988
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 314
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2842
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 396
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 272
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 180
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.34e0

FS
type: SiteQuality
SIO_000300: 1.287e0

DP
type: SiteQuality
SIO_000300: 7.4308e5

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.840000000000001e-1

QD
type: SiteQuality
SIO_000300: 7.21e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.72e-1

MQ
type: SiteQuality
SIO_000300: 5.573e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.976e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.3e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.97e-1

GenotypeQuality
all individuals: 239
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1492
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6683
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4223
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 573
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1163
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4341
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 398
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 976
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2540
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 359
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3375
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4996
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 538
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6004
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.433326844461748e-5
allele num: 41096
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3352
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4040
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10852
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.66e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.47e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.07e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.247134e6

VQSLOD
type: SiteQuality
SIO_000300: -1.444e0

MQ
type: SiteQuality
SIO_000300: 5.118e1

QD
type: SiteQuality
SIO_000300: 7.05e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.8e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.58e0

GenotypeQuality
all individuals: 1630
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1446
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5646
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3431
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1471
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 553
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1474
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 604
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5436
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1368
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19666
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 532
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5294
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8322
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4078
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.848376934666484e-5
allele num: 14602
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 55050
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 706
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -9.08e-1

MQ
type: SiteQuality
SIO_000300: 5.404e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.52e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.860000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.13e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.17e-2

QD
type: SiteQuality
SIO_000300: 8.82e0

DP
type: SiteQuality
SIO_000300: 1.339053e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.13e0

GenotypeQuality
all individuals: 270
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3457
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1284
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1625
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1274
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 439
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 5706
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 580
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 236
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 657
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 692
bin: 9.75e1
variant carriers: 2

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5452
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 742
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 2.34192037470726e-4
allele num: 4270
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6970
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9156
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.502626970227671e-5
allele num: 57100
num of homozygotes: 1

South Asian
type: Population
allele count: 2
allele frequency: 1.299207483435105e-4
allele num: 15394
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.48e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.15e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.6e-3

MQ
type: SiteQuality
SIO_000300: 5.641e1

DP
type: SiteQuality
SIO_000300: 1.365601e6

FS
type: SiteQuality
SIO_000300: 1.868e0

MQRankSum
type: SiteQuality
SIO_000300: 4.27e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.555e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.073e0

QD
type: SiteQuality
SIO_000300: 8.82e0

GenotypeQuality
all individuals: 20742
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 5186
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3414
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1213
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 660
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1320
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 446
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 236
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 208
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 583
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 700
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9330
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7052
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 2.326663564448581e-4
allele num: 4298
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5500
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.45244547683572e-5
allele num: 15498
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.478623856402407e-5
allele num: 57494
num of homozygotes: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 756
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 4.992e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.231e0

MQRankSum
type: SiteQuality
SIO_000300: -1.231e0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.12e-1

QD
type: SiteQuality
SIO_000300: 7.55e0

FS
type: SiteQuality
SIO_000300: 2.97e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.02e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.9e-3

VQSLOD
type: SiteQuality
SIO_000300: -2.559e0

DP
type: SiteQuality
SIO_000300: 1.364431e6

GenotypeQuality
all individuals: 1296
bin: 4.75e1
variant carriers: 5

GenotypeQuality
all individuals: 251
bin: 2.5e0
variant carriers: 6

GenotypeQuality
all individuals: 5766
bin: 2.75e1
variant carriers: 6

GenotypeQuality
all individuals: 1129
bin: 1.25e1
variant carriers: 10

GenotypeQuality
all individuals: 703
bin: 9.75e1
variant carriers: 9

GenotypeQuality
all individuals: 236
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7783
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 208
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 515
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 589
bin: 7.25e1
variant carriers: 3

GenotypeQuality
all individuals: 447
bin: 8.25e1
variant carriers: 3

GenotypeQuality
all individuals: 663
bin: 7.75e1
variant carriers: 3

European (Non-Finnish)
type: Population
allele count: 49
allele frequency: 8.461113413454897e-4
allele num: 57912
num of homozygotes: 19

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5526
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 4.230118443316413e-4
allele num: 7092
num of homozygotes: 1

Latino
type: Population
allele count: 6
allele frequency: 6.350550381033022e-4
allele num: 9448
num of homozygotes: 0

African
type: Population
allele count: 9
allele frequency: 2.051048313582498e-3
allele num: 4388
num of homozygotes: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 764
num of homozygotes: 0

South Asian
type: Population
allele count: 13
allele frequency: 8.353682046009511e-4
allele num: 15562
num of homozygotes: 5

DP
type: SiteQuality
SIO_000300: 1.354969e6

QD
type: SiteQuality
SIO_000300: 2.63e0

VQSLOD
type: SiteQuality
SIO_000300: -8.367e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.18e-1

MQ
type: SiteQuality
SIO_000300: 4.992e1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 1.34e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.66e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.58e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.026e0

GenotypeQuality
all individuals: 434
bin: 5.25e1
variant carriers: 3

GenotypeQuality
all individuals: 288
bin: 2.5e0
variant carriers: 6

GenotypeQuality
all individuals: 724
bin: 9.75e1
variant carriers: 26

GenotypeQuality
all individuals: 209
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1666
bin: 6.75e1
variant carriers: 4

GenotypeQuality
all individuals: 591
bin: 7.25e1
variant carriers: 4

GenotypeQuality
all individuals: 5747
bin: 2.75e1
variant carriers: 12

GenotypeQuality
all individuals: 3168
bin: 3.75e1
variant carriers: 4

GenotypeQuality
all individuals: 63
bin: 5.75e1
variant carriers: 10

GenotypeQuality
all individuals: 445
bin: 8.25e1
variant carriers: 3

GenotypeQuality
all individuals: 5559
bin: 3.25e1
variant carriers: 9

GenotypeQuality
all individuals: 234
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 6
allele frequency: 8.410428931875525e-4
allele num: 7134
num of homozygotes: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 768
num of homozygotes: 0

South Asian
type: Population
allele count: 38
allele frequency: 2.439964042635161e-3
allele num: 15574
num of homozygotes: 12

African
type: Population
allele count: 16
allele frequency: 3.597122302158274e-3
allele num: 4448
num of homozygotes: 3

European (Non-Finnish)
type: Population
allele count: 70
allele frequency: 1.20806295733812e-3
allele num: 57944
num of homozygotes: 27

European (Finnish)
type: Population
allele count: 3
allele frequency: 5.417118093174431e-4
allele num: 5538
num of homozygotes: 1

Latino
type: Population
allele count: 4
allele frequency: 4.233700254022015e-4
allele num: 9448
num of homozygotes: 1

MQ
type: SiteQuality
SIO_000300: 5.571e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.31e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.279999999999999e-2

MQRankSum
type: SiteQuality
SIO_000300: 6.919999999999999e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.51e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.53e0

DP
type: SiteQuality
SIO_000300: 1.349932e6

BaseQRankSum
type: SiteQuality
SIO_000300: -9.29e-1

QD
type: SiteQuality
SIO_000300: 8.83e0

GenotypeQuality
all individuals: 48
bin: 5.75e1
variant carriers: 2

GenotypeQuality
all individuals: 5703
bin: 2.75e1
variant carriers: 4

GenotypeQuality
all individuals: 205
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1042
bin: 1.25e1
variant carriers: 11

GenotypeQuality
all individuals: 1125
bin: 4.75e1
variant carriers: 3

GenotypeQuality
all individuals: 406
bin: 5.25e1
variant carriers: 2

GenotypeQuality
all individuals: 3106
bin: 3.75e1
variant carriers: 2

GenotypeQuality
all individuals: 942
bin: 1.75e1
variant carriers: 11

GenotypeQuality
all individuals: 664
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 596
bin: 7.25e1
variant carriers: 4

GenotypeQuality
all individuals: 448
bin: 8.25e1
variant carriers: 4

GenotypeQuality
all individuals: 8622
bin: 6.25e1
variant carriers: 3

Latino
type: Population
allele count: 6
allele frequency: 6.321112515802782e-4
allele num: 9492
num of homozygotes: 2

European (Finnish)
type: Population
allele count: 2
allele frequency: 3.589375448671931e-4
allele num: 5572
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.398601398601399e-4
allele num: 7150
num of homozygotes: 0

South Asian
type: Population
allele count: 23
allele frequency: 1.475115443817342e-3
allele num: 15592
num of homozygotes: 7

European (Non-Finnish)
type: Population
allele count: 28
allele frequency: 4.80950908653681e-4
allele num: 58218
num of homozygotes: 9

African
type: Population
allele count: 7
allele frequency: 1.571621014818141e-3
allele num: 4454
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 770
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.92e-2

FS
type: SiteQuality
SIO_000300: 2.966e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.93e-1

QD
type: SiteQuality
SIO_000300: 1.34e0

VQSLOD
type: SiteQuality
SIO_000300: -1.061e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.93e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.06e-1

MQ
type: SiteQuality
SIO_000300: 5.322e1

MQRankSum
type: SiteQuality
SIO_000300: 1.93e-1

DP
type: SiteQuality
SIO_000300: 1.348111e6

GenotypeQuality
all individuals: 1059
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1054
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 272
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3083
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 720
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 622
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 458
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1010
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 691
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 242
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9853
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 782
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9794
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7188
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.381620931716656e-5
allele num: 15670
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5654
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.261e0

MQRankSum
type: SiteQuality
SIO_000300: 4.91e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.365e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.04e0

QD
type: SiteQuality
SIO_000300: 9.539999999999999e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.85e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.16e0

DP
type: SiteQuality
SIO_000300: 1.372721e6

GenotypeQuality
all individuals: 461
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 766
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 5564
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1045
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 325
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9932
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 607
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1713
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 173
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 213
bin: 8.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9048
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15466
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6930
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5586
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 780
num of homozygotes: 0

African
type: Population
allele count: 6
allele frequency: 9.545020680878142e-4
allele num: 6286
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.724435247456458e-5
allele num: 57990
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.929999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-2

MQRankSum
type: SiteQuality
SIO_000300: -1.073e0

DP
type: SiteQuality
SIO_000300: 1.376659e6

MQ
type: SiteQuality
SIO_000300: 5.125e1

QD
type: SiteQuality
SIO_000300: 1.64e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.85e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.99e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.89e-1

GenotypeQuality
all individuals: 4811
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 4280
bin: 7.5e0
variant carriers: 3

GenotypeQuality
all individuals: 971
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 424
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1597
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2499
bin: 3.75e1
variant carriers: 2

GenotypeQuality
all individuals: 246
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9691
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 594
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 842
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 762
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 194
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5368
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14700
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.551831160769708e-4
allele num: 6444
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.806227873708547e-5
allele num: 55364
num of homozygotes: 0

East Asian
type: Population
allele count: 5
allele frequency: 8.015389547932029e-4
allele num: 6238
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 3.977724741447892e-4
allele num: 7542
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 754
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 3.61e0

MQRankSum
type: SiteQuality
SIO_000300: -1.091e0

FS
type: SiteQuality
SIO_000300: 2.348e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.0e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.350000000000001e-1

MQ
type: SiteQuality
SIO_000300: 5.096e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.37e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.39e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.745e0

DP
type: SiteQuality
SIO_000300: 1.366684e6

GenotypeQuality
all individuals: 4194
bin: 3.25e1
variant carriers: 46

GenotypeQuality
all individuals: 1404
bin: 1.75e1
variant carriers: 37

GenotypeQuality
all individuals: 2105
bin: 3.75e1
variant carriers: 41

GenotypeQuality
all individuals: 495
bin: 5.25e1
variant carriers: 65

GenotypeQuality
all individuals: 708
bin: 4.75e1
variant carriers: 40

GenotypeQuality
all individuals: 227
bin: 8.75e1
variant carriers: 58

GenotypeQuality
all individuals: 4595
bin: 2.75e1
variant carriers: 36

GenotypeQuality
all individuals: 361
bin: 5.75e1
variant carriers: 54

GenotypeQuality
all individuals: 1498
bin: 9.75e1
variant carriers: 888

GenotypeQuality
all individuals: 259
bin: 9.25e1
variant carriers: 60

GenotypeQuality
all individuals: 18266
bin: 2.25e1
variant carriers: 51

GenotypeQuality
all individuals: 1398
bin: 6.75e1
variant carriers: 37

African
type: Population
allele count: 31
allele frequency: 5.313678436750085e-3
allele num: 5834
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 78
allele frequency: 1.577350859453994e-3
allele num: 49450
num of homozygotes: 0

South Asian
type: Population
allele count: 79
allele frequency: 6.047152480097979e-3
allele num: 13064
num of homozygotes: 0

Latino
type: Population
allele count: 765
allele frequency: 9.698275862068965e-2
allele num: 7888
num of homozygotes: 8

East Asian
type: Population
allele count: 357
allele frequency: 5.650522317188984e-2
allele num: 6318
num of homozygotes: 1

Other
type: Population
allele count: 7
allele frequency: 1.005747126436782e-2
allele num: 696
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 45
allele frequency: 9.113001215066828e-3
allele num: 4938
num of homozygotes: 1

MQ
type: SiteQuality
SIO_000300: 4.556e1

FS
type: SiteQuality
SIO_000300: 4.964e0

MQRankSum
type: SiteQuality
SIO_000300: -1.804e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.067e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.754e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.23e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.74e-1

DP
type: SiteQuality
SIO_000300: 1.327625e6

ClippingRankSum
type: SiteQuality
SIO_000300: -7.66e-1

QD
type: SiteQuality
SIO_000300: 7.44e0

GenotypeQuality
all individuals: 564
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 259
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 374
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1521
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 6916
bin: 2.5e0
variant carriers: 3

GenotypeQuality
all individuals: 227
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 893
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4194
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 708
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1398
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 577
bin: 7.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2105
bin: 3.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 49450
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7888
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4938
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13064
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6318
num of homozygotes: 0

African
type: Population
allele count: 11
allele frequency: 1.885498800137127e-3
allele num: 5834
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 696
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 7.44e0

FS
type: SiteQuality
SIO_000300: 4.964e0

MQRankSum
type: SiteQuality
SIO_000300: -1.804e0

DP
type: SiteQuality
SIO_000300: 1.327625e6

ClippingRankSum
type: SiteQuality
SIO_000300: -7.66e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.754e-1

MQ
type: SiteQuality
SIO_000300: 4.556e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.23e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.067e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.74e-1

GenotypeQuality
all individuals: 18266
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1521
bin: 1.25e1
variant carriers: 3

GenotypeQuality
all individuals: 708
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4194
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 374
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1398
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1498
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 495
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 4595
bin: 2.75e1
variant carriers: 2

GenotypeQuality
all individuals: 564
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6318
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5834
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 696
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7888
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 2.025111381125962e-4
allele num: 4938
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.415571284125379e-4
allele num: 49450
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.530924678505818e-4
allele num: 13064
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 4.556e1

FS
type: SiteQuality
SIO_000300: 4.964e0

QD
type: SiteQuality
SIO_000300: 7.44e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.067e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.74e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.804e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.66e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.23e0

VQSLOD
type: SiteQuality
SIO_000300: -5.754e-1

DP
type: SiteQuality
SIO_000300: 1.327625e6

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7888
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 696
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13064
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 7.44e0

MQRankSum
type: SiteQuality
SIO_000300: -1.804e0

VQSLOD
type: SiteQuality
SIO_000300: -5.754e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.067e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.66e-1

DP
type: SiteQuality
SIO_000300: 1.327625e6

MQ
type: SiteQuality
SIO_000300: 4.556e1

FS
type: SiteQuality
SIO_000300: 4.964e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.74e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.23e0

GenotypeQuality
all individuals: 1377
bin: 6.75e1
variant carriers: 53

GenotypeQuality
all individuals: 9576
bin: 2.5e0
variant carriers: 70

GenotypeQuality
all individuals: 841
bin: 4.75e1
variant carriers: 82

GenotypeQuality
all individuals: 3711
bin: 3.25e1
variant carriers: 66

GenotypeQuality
all individuals: 926
bin: 4.25e1
variant carriers: 72

GenotypeQuality
all individuals: 638
bin: 5.75e1
variant carriers: 74

GenotypeQuality
all individuals: 271
bin: 8.75e1
variant carriers: 96

GenotypeQuality
all individuals: 679
bin: 5.25e1
variant carriers: 76

GenotypeQuality
all individuals: 3181
bin: 9.75e1
variant carriers: 2506

GenotypeQuality
all individuals: 618
bin: 7.75e1
variant carriers: 75

GenotypeQuality
all individuals: 403
bin: 8.25e1
variant carriers: 77

GenotypeQuality
all individuals: 7634
bin: 6.25e1
variant carriers: 62

South Asian
type: Population
allele count: 96
allele frequency: 7.864984433884975e-3
allele num: 12206
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 146
allele frequency: 3.207381370826011e-3
allele num: 45520
num of homozygotes: 0

Latino
type: Population
allele count: 900
allele frequency: 1.258037461559967e-1
allele num: 7154
num of homozygotes: 20

African
type: Population
allele count: 1566
allele frequency: 2.597014925373134e-1
allele num: 6030
num of homozygotes: 98

East Asian
type: Population
allele count: 377
allele frequency: 6.298028733711995e-2
allele num: 5986
num of homozygotes: 4

European (Finnish)
type: Population
allele count: 46
allele frequency: 9.982638888888888e-3
allele num: 4608
num of homozygotes: 1

Other
type: Population
allele count: 11
allele frequency: 1.708074534161491e-2
allele num: 644
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.292988e6

MQRankSum
type: SiteQuality
SIO_000300: -1.741e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.475e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.34e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.47e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.061e0

QD
type: SiteQuality
SIO_000300: 1.303e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 6.909999999999999e-1

MQ
type: SiteQuality
SIO_000300: 4.549e1

GenotypeQuality
all individuals: 303
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 9576
bin: 2.5e0
variant carriers: 6

GenotypeQuality
all individuals: 926
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 638
bin: 5.75e1
variant carriers: 3

GenotypeQuality
all individuals: 679
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1940
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1605
bin: 1.25e1
variant carriers: 4

GenotypeQuality
all individuals: 3827
bin: 7.5e0
variant carriers: 4

GenotypeQuality
all individuals: 7634
bin: 6.25e1
variant carriers: 3

GenotypeQuality
all individuals: 602
bin: 7.25e1
variant carriers: 2

GenotypeQuality
all individuals: 403
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 3181
bin: 9.75e1
variant carriers: 7

East Asian
type: Population
allele count: 4
allele frequency: 6.682258603407952e-4
allele num: 5986
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7154
num of homozygotes: 0

African
type: Population
allele count: 12
allele frequency: 1.990049751243781e-3
allele num: 6030
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.393673110720563e-5
allele num: 45520
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4608
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 644
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.192692118630181e-5
allele num: 12206
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.47e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.475e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.34e-1

DP
type: SiteQuality
SIO_000300: 1.292988e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.061e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.741e0

QD
type: SiteQuality
SIO_000300: 1.303e1

VQSLOD
type: SiteQuality
SIO_000300: 6.909999999999999e-1

MQ
type: SiteQuality
SIO_000300: 4.549e1

GenotypeQuality
all individuals: 1940
bin: 3.75e1
variant carriers: 2

GenotypeQuality
all individuals: 403
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3827
bin: 7.5e0
variant carriers: 4

GenotypeQuality
all individuals: 9576
bin: 2.5e0
variant carriers: 5

GenotypeQuality
all individuals: 4170
bin: 2.75e1
variant carriers: 3

GenotypeQuality
all individuals: 618
bin: 7.75e1
variant carriers: 3

GenotypeQuality
all individuals: 679
bin: 5.25e1
variant carriers: 3

GenotypeQuality
all individuals: 303
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 7634
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 638
bin: 5.75e1
variant carriers: 3

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 644
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5986
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6030
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 26
allele frequency: 5.711775043936731e-4
allele num: 45520
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4608
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 2.795638803466592e-4
allele num: 7154
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 3.277076847452073e-4
allele num: 12206
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.47e-1

MQ
type: SiteQuality
SIO_000300: 4.549e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.34e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.061e0

MQRankSum
type: SiteQuality
SIO_000300: -1.741e0

DP
type: SiteQuality
SIO_000300: 1.292988e6

VQSLOD
type: SiteQuality
SIO_000300: 6.909999999999999e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.303e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.475e-1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 644
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5986
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7154
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.303e1

MQRankSum
type: SiteQuality
SIO_000300: -1.741e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.061e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.34e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.475e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.909999999999999e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.47e-1

DP
type: SiteQuality
SIO_000300: 1.292988e6

MQ
type: SiteQuality
SIO_000300: 4.549e1

GenotypeQuality
all individuals: 12427
bin: 2.25e1
variant carriers: 166

GenotypeQuality
all individuals: 1973
bin: 3.75e1
variant carriers: 138

GenotypeQuality
all individuals: 999
bin: 5.25e1
variant carriers: 165

GenotypeQuality
all individuals: 806
bin: 5.75e1
variant carriers: 158

GenotypeQuality
all individuals: 3380
bin: 7.5e0
variant carriers: 169

GenotypeQuality
all individuals: 3474
bin: 3.25e1
variant carriers: 125

GenotypeQuality
all individuals: 3835
bin: 2.75e1
variant carriers: 150

GenotypeQuality
all individuals: 1947
bin: 1.75e1
variant carriers: 137

GenotypeQuality
all individuals: 397
bin: 9.25e1
variant carriers: 179

GenotypeQuality
all individuals: 371
bin: 8.75e1
variant carriers: 185

GenotypeQuality
all individuals: 706
bin: 7.25e1
variant carriers: 152

GenotypeQuality
all individuals: 1397
bin: 6.75e1
variant carriers: 141

African
type: Population
allele count: 1624
allele frequency: 3.168162309793211e-1
allele num: 5126
num of homozygotes: 156

Latino
type: Population
allele count: 1121
allele frequency: 1.630782659295898e-1
allele num: 6874
num of homozygotes: 36

South Asian
type: Population
allele count: 628
allele frequency: 5.225495090697287e-2
allele num: 12018
num of homozygotes: 10

Other
type: Population
allele count: 35
allele frequency: 5.993150684931507e-2
allele num: 584
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 182
allele frequency: 4.50272142503711e-2
allele num: 4042
num of homozygotes: 4

European (Non-Finnish)
type: Population
allele count: 1968
allele frequency: 4.561680033378147e-2
allele num: 43142
num of homozygotes: 14

East Asian
type: Population
allele count: 406
allele frequency: 7.856037151702787e-2
allele num: 5168
num of homozygotes: 5

ClippingRankSum
type: SiteQuality
SIO_000300: -8.95e-1

DP
type: SiteQuality
SIO_000300: 1.225828e6

VQSLOD
type: SiteQuality
SIO_000300: 7.04e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.84e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.89e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.733e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.171e1

MQ
type: SiteQuality
SIO_000300: 4.845e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.566e-1

GenotypeQuality
all individuals: 3380
bin: 7.5e0
variant carriers: 3

GenotypeQuality
all individuals: 3474
bin: 3.25e1
variant carriers: 3

GenotypeQuality
all individuals: 806
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1973
bin: 3.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1947
bin: 1.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1157
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5352
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 397
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 706
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 717
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1397
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 371
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 2
allele frequency: 2.909514111143439e-4
allele num: 6874
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 584
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4042
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 6.953780538686199e-5
allele num: 43142
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.320852055250458e-5
allele num: 12018
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5168
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 3.901677721420211e-4
allele num: 5126
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.84e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.04e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.566e-1

QD
type: SiteQuality
SIO_000300: 1.171e1

DP
type: SiteQuality
SIO_000300: 1.225828e6

MQRankSum
type: SiteQuality
SIO_000300: -1.733e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.95e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.89e-1

MQ
type: SiteQuality
SIO_000300: 4.845e1