11-223802-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 223802
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 223802
    reference: chr 11
allele count: 2
allele frequency: 1.904399162064369e-5
allele num: 105020
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433077
  ensembl transcript: ENST00000532956
  gene symbol: SIRT3
  hgvsc: ENST00000532956.1:c.808-4761G>A
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000435464
  ensembl transcript: ENST00000525319
  gene symbol: SIRT3
  hgvsc: ENST00000525319.1:c.726+276G>A
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000437216
  ensembl transcript: ENST00000529382
  gene symbol: SIRT3
  hgvsc: ENST00000529382.1:c.543+276G>A
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000372191
  ensembl transcript: ENST00000382743
  gene symbol: SIRT3
  hgvsc: ENST00000382743.4:c.969+276G>A
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000432937
  ensembl transcript: ENST00000524564
  gene symbol: SIRT3
  hgvsc: ENST00000524564.1:c.777+276G>A
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433899
  ensembl transcript: ENST00000532837
  gene symbol: SIRT3
  hgvsc: ENST00000532837.1:c.*682+276G>A
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000434747
  ensembl transcript: ENST00000529937
  gene symbol: SIRT3
  hgvsc: ENST00000529937.1:c.357G>A
  hgvsp: ENST00000529937.1:c.357G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14931
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2621
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29347
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1359
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1442
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1684
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11436
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 802
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5784
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1617
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 553
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2070
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 161
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 490
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2056
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 698
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 636
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34379
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1190
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Arg119Arg
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD

11-223804-TGTACCCCTCCCTTCCCCTGCCCTCCAGCCTCCTCCCTGCACAGGCCTGCCGACAGCCCATGAGATGACTC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 223804
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 223734
    reference: chr 11
allele count: 2
allele frequency: 1.904653067443765e-5
allele num: 105006
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000437216
  ensembl transcript: ENST00000529382
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433077
  ensembl transcript: ENST00000532956
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000432937
  ensembl transcript: ENST00000524564
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000435464
  ensembl transcript: ENST00000525319
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: coding_sequence_variant
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000434747
  ensembl transcript: ENST00000529937
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000372191
  ensembl transcript: ENST00000382743
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433899
  ensembl transcript: ENST00000532837
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
canonical: false
consequence: splice acceptor
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5822
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1725
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29223
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1464
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2556
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1363
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11446
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1651
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 751
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 496
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1475
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 371
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 645
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2005
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2058
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: TGTACCCCTCCCTTCCCCTGCCCTCCAGCCTCCTCCCTGCACAGGCCTGCCGACAGCCCATGAGATGACTC
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP

11-223822-TGCCCTCC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 223822
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 223815
    reference: chr 11
allele count: 1
allele frequency: 9.498660688842873e-6
allele num: 105278
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433077
  ensembl transcript: ENST00000532956
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000437216
  ensembl transcript: ENST00000529382
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000434747
  ensembl transcript: ENST00000529937
  gene symbol: SIRT3
  hgvsc: ENST00000529937.1:c.330_336delGGAGGGC
  hgvsp: ENSP00000434747.1:p.Glu111GlyfsTer53
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000432937
  ensembl transcript: ENST00000524564
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433899
  ensembl transcript: ENST00000532837
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000435464
  ensembl transcript: ENST00000525319
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000372191
  ensembl transcript: ENST00000382743
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
canonical: false
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2386
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26923
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2511
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1099
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2139
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1762
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11636
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6105
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 561
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32203
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1136
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 498
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1044
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6228
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1169
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 258
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3402
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 999
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Glu111GlyfsTer53
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: TGCCCTCC
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: QD

11-223823-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 223823
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 223823
    reference: chr 11
allele count: 987
allele frequency: 1.000304043782305e-2
allele num: 98670
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433899
  ensembl transcript: ENST00000532837
  gene symbol: SIRT3
  hgvsc: ENST00000532837.1:c.*682+255C>T
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000434747
  ensembl transcript: ENST00000529937
  gene symbol: SIRT3
  hgvsc: ENST00000529937.1:c.336C>T
  hgvsp: ENST00000529937.1:c.336C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000372191
  ensembl transcript: ENST00000382743
  gene symbol: SIRT3
  hgvsc: ENST00000382743.4:c.969+255C>T
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000432937
  ensembl transcript: ENST00000524564
  gene symbol: SIRT3
  hgvsc: ENST00000524564.1:c.777+255C>T
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000435464
  ensembl transcript: ENST00000525319
  gene symbol: SIRT3
  hgvsc: ENST00000525319.1:c.726+255C>T
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000437216
  ensembl transcript: ENST00000529382
  gene symbol: SIRT3
  hgvsc: ENST00000529382.1:c.543+255C>T
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433077
  ensembl transcript: ENST00000532956
  gene symbol: SIRT3
  hgvsc: ENST00000532956.1:c.808-4782C>T
  variant of: http://identifiers.org/hgnc/14931
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26319
  bin: 2.25e1
  variant carriers: 125
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 5.75e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 2445
  bin: 1.75e1
  variant carriers: 104
genotype depth: GenotypeDepth
  all individuals: 2013
  bin: 7.5e0
  variant carriers: 56
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1022
  bin: 2.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 6.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 11322
  bin: 2.75e1
  variant carriers: 138
genotype depth: GenotypeDepth
  all individuals: 6049
  bin: 3.25e1
  variant carriers: 111
genotype depth: GenotypeDepth
  all individuals: 1815
  bin: 3.75e1
  variant carriers: 107
genotype depth: GenotypeDepth
  all individuals: 2309
  bin: 1.25e1
  variant carriers: 62
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 4.75e1
  variant carriers: 51
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 4.25e1
  variant carriers: 63
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 5.25e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 30788
  bin: 6.25e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 997
  bin: 3.25e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 1325
  bin: 9.75e1
  variant carriers: 769
genotype quality: GenotypeQuality
  all individuals: 307
  bin: 5.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 1831
  bin: 7.25e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 1169
  bin: 7.5e0
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 1774
  bin: 7.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 3338
  bin: 2.25e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 821
  bin: 3.75e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 223
  bin: 1.75e1
  variant carriers: 4
hgvs: p.Gly112Gly
num of homozygotes: 134
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum

http://identifiers.org/exac.variant/11-223824-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 223824
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 223824
    reference: chr 11
allele count: 1
allele frequency: 9.505884142284074e-6
allele num: 105198
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433077
  ensembl transcript: ENST00000532956
  gene symbol: SIRT3
  hgvsc: ENST00000532956.1:c.808-4783G>T
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000434747
  ensembl transcript: ENST00000529937
  gene symbol: SIRT3
  hgvsc: ENST00000529937.1:c.335G>T
  hgvsp: ENSP00000434747.1:p.Gly112Val
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000432937
  ensembl transcript: ENST00000524564
  gene symbol: SIRT3
  hgvsc: ENST00000524564.1:c.777+254G>T
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433899
  ensembl transcript: ENST00000532837
  gene symbol: SIRT3
  hgvsc: ENST00000532837.1:c.*682+254G>T
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000435464
  ensembl transcript: ENST00000525319
  gene symbol: SIRT3
  hgvsc: ENST00000525319.1:c.726+254G>T
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000372191
  ensembl transcript: ENST00000382743
  gene symbol: SIRT3
  hgvsc: ENST00000382743.4:c.969+254G>T
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000437216
  ensembl transcript: ENST00000529382
  gene symbol: SIRT3
  hgvsc: ENST00000529382.1:c.543+254G>T
  variant of: http://identifiers.org/hgnc/14931
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6088
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1787
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2081
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2861
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2619
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11415
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26427
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 863
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31295
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 479
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1021
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1239
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 222
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 594
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1080
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3705
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Gly112Val
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: DP
site quality: MQ
site quality: ClippingRankSum

11-223830-AG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 223830
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 223829
    reference: chr 11
allele count: 3
allele frequency: 2.862595419847328e-5
allele num: 104800
alternate allele: A
canonical: false
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6073
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25347
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11786
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2045
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3292
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2845
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1081
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1775
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 267
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1171
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1277
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 761
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1246
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1139
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1903
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 260
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4001
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1466
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1592
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 358
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 498
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29512
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1067
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1096
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 469
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1960
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5651
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 59346
  num of homozygotes: 0
population: European (Finnish)
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 6328
  num of homozygotes: 0
population: South Asian
  type: Population
  allele count: 0
  allele frequency: 0.0e0
  allele num: 15118
  num of homozygotes: 0
population: Latino
  type: Population
  allele count: 3
  allele frequency: 3.306149437954596e-4
  allele num: 9074
  num of homozygotes: 0
population: Other
population: African
population: East Asian
reference allele: AG
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP

11-223830-AGCCTCCTCCCTGCACAGGCCTGCCGACAGCCCATGAGAT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 223830
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 223791
    reference: chr 11
allele count: 5
allele frequency: 4.770992366412214e-5
allele num: 104800
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000437216
  ensembl transcript: ENST00000529382
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000435464
  ensembl transcript: ENST00000525319
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000372191
  ensembl transcript: ENST00000382743
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433077
  ensembl transcript: ENST00000532956
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: coding_sequence_variant
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000434747
  ensembl transcript: ENST00000529937
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000432937
  ensembl transcript: ENST00000524564
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433899
  ensembl transcript: ENST00000532837
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
canonical: false
consequence: splice acceptor
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3292
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11786
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25347
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2845
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1775
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2045
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1081
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6073
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1171
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1592
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 260
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29512
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1246
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 358
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5651
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1466
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4001
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 267
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: East Asian
reference allele: AGCCTCCTCCCTGCACAGGCCTGCCGACAGCCCATGAGAT
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD

11-223830-AGCCTCCTCCCTGCACAGGCCTGCCGACAGCCCATGAGATGACTCCTGTACCCCTCCCTTCCCCTG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 223830
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 223765
    reference: chr 11
allele count: 1
allele frequency: 9.541984732824428e-6
allele num: 104800
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000435464
  ensembl transcript: ENST00000525319
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: coding_sequence_variant
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000434747
  ensembl transcript: ENST00000529937
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000437216
  ensembl transcript: ENST00000529382
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000432937
  ensembl transcript: ENST00000524564
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433077
  ensembl transcript: ENST00000532956
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433899
  ensembl transcript: ENST00000532837
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000372191
  ensembl transcript: ENST00000382743
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
canonical: false
consequence: splice acceptor
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1081
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1775
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2845
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6073
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2045
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11786
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25347
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 852
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3292
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5651
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 260
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1960
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1246
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1592
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1067
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1096
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 761
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 498
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1903
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: Other
reference allele: AGCCTCCTCCCTGCACAGGCCTGCCGACAGCCCATGAGATGACTCCTGTACCCCTCCCTTCCCCTG
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum

11-223831-GCCTCCTCCCTGC-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 223831
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 223819
    reference: chr 11
allele count: 8
allele frequency: 7.650377737400784e-5
allele num: 104570
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000372191
  ensembl transcript: ENST00000382743
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000437216
  ensembl transcript: ENST00000529382
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000435464
  ensembl transcript: ENST00000525319
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433899
  ensembl transcript: ENST00000532837
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000434747
  ensembl transcript: ENST00000529937
  gene symbol: SIRT3
  hgvsp: ENSP00000434747.1:p.Ala106_Arg109del
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000432937
  ensembl transcript: ENST00000524564
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433077
  ensembl transcript: ENST00000532956
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
canonical: false
consequence: inframe deletion
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 6221
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1083
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3412
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2028
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2883
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11825
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1779
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24943
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1185
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28680
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 621
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1949
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1524
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3986
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 452
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 284
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1904
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 500
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Ala106_Arg109del
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: GCCTCCTCCCTGC
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: QD

http://identifiers.org/exac.variant/11-223832-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 223832
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 223832
    reference: chr 11
allele count: 5396
allele frequency: 7.198121765113921e-2
allele num: 74964
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000435464
  ensembl transcript: ENST00000525319
  gene symbol: SIRT3
  hgvsc: ENST00000525319.1:c.726+246G>T
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000432937
  ensembl transcript: ENST00000524564
  gene symbol: SIRT3
  hgvsc: ENST00000524564.1:c.777+246G>T
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000434747
  ensembl transcript: ENST00000529937
  gene symbol: SIRT3
  hgvsc: ENST00000529937.1:c.327G>T
  hgvsp: ENSP00000434747.1:p.Arg109Ser
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000372191
  ensembl transcript: ENST00000382743
  gene symbol: SIRT3
  hgvsc: ENST00000382743.4:c.969+246G>T
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433077
  ensembl transcript: ENST00000532956
  gene symbol: SIRT3
  hgvsc: ENST00000532956.1:c.808-4791G>T
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000437216
  ensembl transcript: ENST00000529382
  gene symbol: SIRT3
  hgvsc: ENST00000529382.1:c.543+246G>T
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433899
  ensembl transcript: ENST00000532837
  gene symbol: SIRT3
  hgvsc: ENST00000532837.1:c.*682+246G>T
  variant of: http://identifiers.org/hgnc/14931
canonical: false
consequence: missense
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 1001
  bin: 5.25e1
  variant carriers: 291
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 7.25e1
  variant carriers: 57
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 6.25e1
  variant carriers: 133
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 6.75e1
  variant carriers: 116
genotype depth: GenotypeDepth
  all individuals: 2155
  bin: 4.25e1
  variant carriers: 579
genotype depth: GenotypeDepth
  all individuals: 2864
  bin: 1.75e1
  variant carriers: 340
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 5.75e1
  variant carriers: 225
genotype depth: GenotypeDepth
  all individuals: 6055
  bin: 3.25e1
  variant carriers: 756
genotype depth: GenotypeDepth
  all individuals: 964
  bin: 2.5e0
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 9221
  bin: 2.75e1
  variant carriers: 704
genotype depth: GenotypeDepth
  all individuals: 17303
  bin: 2.25e1
  variant carriers: 586
genotype depth: GenotypeDepth
  all individuals: 1704
  bin: 7.5e0
  variant carriers: 142
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.75e1
  variant carriers: 50
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.75e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 1348
  bin: 4.75e1
  variant carriers: 409
genotype depth: GenotypeDepth
  all individuals: 2986
  bin: 3.75e1
  variant carriers: 701
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 2494
  bin: 1.25e1
  variant carriers: 197
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.25e1
  variant carriers: 36
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 1.75e1
  variant carriers: 24
genotype quality: GenotypeQuality
  all individuals: 10084
  bin: 2.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 5206
  bin: 9.75e1
  variant carriers: 4929
genotype quality: GenotypeQuality
  all individuals: 1072
  bin: 7.5e0
  variant carriers: 20
genotype quality: GenotypeQuality
  all individuals: 868
  bin: 3.25e1
  variant carriers: 18
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 1.25e1
  variant carriers: 19
genotype quality: GenotypeQuality
  all individuals: 3519
  bin: 6.75e1
  variant carriers: 40
genotype quality: GenotypeQuality
  all individuals: 278
  bin: 4.75e1
  variant carriers: 28
genotype quality: GenotypeQuality
  all individuals: 239
  bin: 4.25e1
  variant carriers: 18
genotype quality: GenotypeQuality
  all individuals: 3365
  bin: 2.25e1
  variant carriers: 22
hgvs: p.Arg109Ser
num of homozygotes: 177
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: FS

11-223832-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 223832
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 223832
    reference: chr 11
allele count: 3
allele frequency: 4.001920922042581e-5
allele num: 74964
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433077
  ensembl transcript: ENST00000532956
  gene symbol: SIRT3
  hgvsc: ENST00000532956.1:c.808-4791G>C
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000372191
  ensembl transcript: ENST00000382743
  gene symbol: SIRT3
  hgvsc: ENST00000382743.4:c.969+246G>C
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000437216
  ensembl transcript: ENST00000529382
  gene symbol: SIRT3
  hgvsc: ENST00000529382.1:c.543+246G>C
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000435464
  ensembl transcript: ENST00000525319
  gene symbol: SIRT3
  hgvsc: ENST00000525319.1:c.726+246G>C
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000434747
  ensembl transcript: ENST00000529937
  gene symbol: SIRT3
  hgvsc: ENST00000529937.1:c.327G>C
  hgvsp: ENSP00000434747.1:p.Arg109Ser
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433899
  ensembl transcript: ENST00000532837
  gene symbol: SIRT3
  hgvsc: ENST00000532837.1:c.*682+246G>C
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000432937
  ensembl transcript: ENST00000524564
  gene symbol: SIRT3
  hgvsc: ENST00000524564.1:c.777+246G>C
  variant of: http://identifiers.org/hgnc/14931
canonical: false
consequence: missense
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 964
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17303
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1704
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2986
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1348
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1001
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2155
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2864
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9221
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2494
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6055
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 239
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 528
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3519
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1072
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3365
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10084
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 208
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Arg109Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

11-223832-CCTCCTCCCTGCACAGGCCTGCCGACAGCCCATGAGATGACTCCTGTACCCCTCCCTTCCCCTGCCCTCCAG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 223832
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 223761
    reference: chr 11
allele count: 4
allele frequency: 5.335894562723441e-5
allele num: 74964
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000437216
  ensembl transcript: ENST00000529382
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: coding_sequence_variant
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000434747
  ensembl transcript: ENST00000529937
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433077
  ensembl transcript: ENST00000532956
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000432937
  ensembl transcript: ENST00000524564
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433899
  ensembl transcript: ENST00000532837
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000435464
  ensembl transcript: ENST00000525319
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000372191
  ensembl transcript: ENST00000382743
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
canonical: false
consequence: splice acceptor
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 1348
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1704
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1001
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2986
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2494
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9221
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 964
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2155
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2864
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6055
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17303
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5206
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 552
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20378
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 784
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 868
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10084
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 250
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1072
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: South Asian
population: East Asian
population: Latino
reference allele: CCTCCTCCCTGCACAGGCCTGCCGACAGCCCATGAGATGACTCCTGTACCCCTCCCTTCCCCTGCCCTCCAG
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD

11-223833-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 223833
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 223833
    reference: chr 11
allele count: 1
allele frequency: 9.643201542912246e-6
allele num: 103700
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000372191
  ensembl transcript: ENST00000382743
  gene symbol: SIRT3
  hgvsc: ENST00000382743.4:c.969+245G>A
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433899
  ensembl transcript: ENST00000532837
  gene symbol: SIRT3
  hgvsc: ENST00000532837.1:c.*682+245G>A
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000432937
  ensembl transcript: ENST00000524564
  gene symbol: SIRT3
  hgvsc: ENST00000524564.1:c.777+245G>A
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000434747
  ensembl transcript: ENST00000529937
  gene symbol: SIRT3
  hgvsc: ENST00000529937.1:c.326G>A
  hgvsp: ENSP00000434747.1:p.Arg109Lys
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000437216
  ensembl transcript: ENST00000529382
  gene symbol: SIRT3
  hgvsc: ENST00000529382.1:c.543+245G>A
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000435464
  ensembl transcript: ENST00000525319
  gene symbol: SIRT3
  hgvsc: ENST00000525319.1:c.726+245G>A
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433077
  ensembl transcript: ENST00000532956
  gene symbol: SIRT3
  hgvsc: ENST00000532956.1:c.808-4792G>A
  variant of: http://identifiers.org/hgnc/14931
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1503
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11069
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17478
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3330
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1377
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2245
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4483
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4929
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8006
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1786
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1480
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1939
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 444
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7261
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 469
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26221
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Arg109Lys
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
population: Latino
population: African
population: East Asian
reference allele: C
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: MQ

11-223840-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 223840
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 223840
    reference: chr 11
allele count: 1
allele frequency: 1.14009485589201e-5
allele num: 87712
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000434747
  ensembl transcript: ENST00000529937
  gene symbol: SIRT3
  hgvsc: ENST00000529937.1:c.319G>A
  hgvsp: ENSP00000434747.1:p.Gly107Arg
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000435464
  ensembl transcript: ENST00000525319
  gene symbol: SIRT3
  hgvsc: ENST00000525319.1:c.726+238G>A
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000437216
  ensembl transcript: ENST00000529382
  gene symbol: SIRT3
  hgvsc: ENST00000529382.1:c.543+238G>A
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000432937
  ensembl transcript: ENST00000524564
  gene symbol: SIRT3
  hgvsc: ENST00000524564.1:c.777+238G>A
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433077
  ensembl transcript: ENST00000532956
  gene symbol: SIRT3
  hgvsc: ENST00000532956.1:c.808-4799G>A
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433899
  ensembl transcript: ENST00000532837
  gene symbol: SIRT3
  hgvsc: ENST00000532837.1:c.*682+238G>A
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000372191
  ensembl transcript: ENST00000382743
  gene symbol: SIRT3
  hgvsc: ENST00000382743.4:c.969+238G>A
  variant of: http://identifiers.org/hgnc/14931
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2390
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16025
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3805
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7708
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1675
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1087
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6582
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5958
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8654
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 577
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8510
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18797
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1260
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1269
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 992
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 409
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1799
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 374
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 419
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Gly107Arg
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD

11-223844-ACAGGCC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 223844
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 223838
    reference: chr 11
allele count: 1
allele frequency: 1.140198850679558e-5
allele num: 87704
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000432937
  ensembl transcript: ENST00000524564
  gene symbol: SIRT3
  hgvsc: ENST00000524564.1:c.777+228_777+233delGGCCTG
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000372191
  ensembl transcript: ENST00000382743
  gene symbol: SIRT3
  hgvsc: ENST00000382743.4:c.969+228_969+233delGGCCTG
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: coding_sequence_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000434747
  ensembl transcript: ENST00000529937
  gene symbol: SIRT3
  hgvsc: ENST00000529937.1:c.310-1_314delGGCCTG
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433077
  ensembl transcript: ENST00000532956
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000437216
  ensembl transcript: ENST00000529382
  gene symbol: SIRT3
  hgvsc: ENST00000529382.1:c.543+228_543+233delGGCCTG
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000435464
  ensembl transcript: ENST00000525319
  gene symbol: SIRT3
  hgvsc: ENST00000525319.1:c.726+228_726+233delGGCCTG
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433899
  ensembl transcript: ENST00000532837
  gene symbol: SIRT3
  hgvsc: ENST00000532837.1:c.*682+228_*682+233delGGCCTG
  variant of: http://identifiers.org/hgnc/14931
canonical: false
consequence: splice acceptor
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1721
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15925
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5860
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8786
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7644
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3871
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1082
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2352
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6648
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1000
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 408
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 805
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1791
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1254
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8645
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 438
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 810
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8115
  bin: 7.5e0
  variant carriers: 0
hgvs: c.310-1_314delGGCCTG
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: ACAGGCC
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP

11-223844-ACAGGCCTGCCGACAGCCCATGAGATGACTCCTGTACCCCTCCCTTCCCCTGCCCTCCAGC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 223844
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 223784
    reference: chr 11
allele count: 7
allele frequency: 7.98139195475691e-5
allele num: 87704
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000437216
  ensembl transcript: ENST00000529382
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: coding_sequence_variant
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000434747
  ensembl transcript: ENST00000529937
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000435464
  ensembl transcript: ENST00000525319
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433077
  ensembl transcript: ENST00000532956
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000432937
  ensembl transcript: ENST00000524564
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433899
  ensembl transcript: ENST00000532837
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000372191
  ensembl transcript: ENST00000382743
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
canonical: false
consequence: splice acceptor
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3871
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5860
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1082
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1721
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7644
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2352
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6648
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15925
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8786
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2384
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1254
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 698
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19134
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3932
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 778
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 805
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8645
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 376
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8115
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: ACAGGCCTGCCGACAGCCCATGAGATGACTCCTGTACCCCTCCCTTCCCCTGCCCTCCAGC
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD

11-223847-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 223847
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 223847
    reference: chr 11
allele count: 342
allele frequency: 4.363246663774846e-3
allele num: 78382
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000432937
  ensembl transcript: ENST00000524564
  gene symbol: SIRT3
  hgvsc: ENST00000524564.1:c.777+231C>T
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000435464
  ensembl transcript: ENST00000525319
  gene symbol: SIRT3
  hgvsc: ENST00000525319.1:c.726+231C>T
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000437216
  ensembl transcript: ENST00000529382
  gene symbol: SIRT3
  hgvsc: ENST00000529382.1:c.543+231C>T
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000434747
  ensembl transcript: ENST00000529937
  gene symbol: SIRT3
  hgvsc: ENST00000529937.1:c.312C>T
  hgvsp: ENST00000529937.1:c.312C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433077
  ensembl transcript: ENST00000532956
  gene symbol: SIRT3
  hgvsc: ENST00000532956.1:c.808-4806C>T
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000372191
  ensembl transcript: ENST00000382743
  gene symbol: SIRT3
  hgvsc: ENST00000382743.4:c.969+231C>T
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433899
  ensembl transcript: ENST00000532837
  gene symbol: SIRT3
  hgvsc: ENST00000532837.1:c.*682+231C>T
  variant of: http://identifiers.org/hgnc/14931
canonical: false
consequence: splice region
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 8301
  bin: 2.75e1
  variant carriers: 48
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3723
  bin: 7.5e0
  variant carriers: 68
genotype depth: GenotypeDepth
  all individuals: 1966
  bin: 2.5e0
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2009
  bin: 3.75e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 4.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 4.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6748
  bin: 1.75e1
  variant carriers: 64
genotype depth: GenotypeDepth
  all individuals: 15203
  bin: 2.25e1
  variant carriers: 52
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 5.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 5086
  bin: 3.25e1
  variant carriers: 46
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6141
  bin: 1.25e1
  variant carriers: 85
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 797
  bin: 8.25e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 1028
  bin: 1.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1727
  bin: 2.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 16304
  bin: 6.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 366
  bin: 8.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 680
  bin: 1.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 5357
  bin: 2.25e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 2091
  bin: 3.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 1565
  bin: 4.75e1
  variant carriers: 12
hgvs: c.312C>T
num of homozygotes: 5
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
population: African
population: European (Finnish)
population: Latino
reference allele: G
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: DP

11-223847-GGCCTGCCGACAGCCCATGAGATGACTCCTGTACCCCTCCCTTCCCCTGCCCTCCAGCCTCCTCCCTGCACAGGCCTGCCGACAGCCCATGAGGTGACTCCTGTACCCCTCCCTTCCCCT-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 223847
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 223728
    reference: chr 11
allele count: 9
allele frequency: 1.148222806256539e-4
allele num: 78382
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433899
  ensembl transcript: ENST00000532837
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000432937
  ensembl transcript: ENST00000524564
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000372191
  ensembl transcript: ENST00000382743
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433077
  ensembl transcript: ENST00000532956
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: coding_sequence_variant
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000434747
  ensembl transcript: ENST00000529937
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000435464
  ensembl transcript: ENST00000525319
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000437216
  ensembl transcript: ENST00000529382
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
canonical: false
consequence: splice acceptor
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 8301
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1966
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5086
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15203
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2009
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6141
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3723
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6748
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 4.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 908
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 680
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2091
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1230
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1009
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16304
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1262
  bin: 9.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 1727
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8046
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 797
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1028
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: GGCCTGCCGACAGCCCATGAGATGACTCCTGTACCCCTCCCTTCCCCTGCCCTCCAGCCTCCTCCCTGCACAGGCCTGCCGACAGCCCATGAGGTGACTCCTGTACCCCTCCCTTCCCCT
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: QD

11-223848-GCCTGCCGACAGCCCATGAGATGACTCCTGTACCCCTCCCTTCCCCTGCCCTCCAGCCTCCTCCCTGCACAGGCCTGCCGACAGCCCATGAGGTGACTCCTGTACCCCTCCCTTCC-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 223848
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 223733
    reference: chr 11
allele count: 4
allele frequency: 5.163688939378292e-5
allele num: 77464
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433899
  ensembl transcript: ENST00000532837
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000437216
  ensembl transcript: ENST00000529382
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: coding_sequence_variant
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000434747
  ensembl transcript: ENST00000529937
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433077
  ensembl transcript: ENST00000532956
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000435464
  ensembl transcript: ENST00000525319
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000432937
  ensembl transcript: ENST00000524564
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000372191
  ensembl transcript: ENST00000382743
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
canonical: false
consequence: splice acceptor
filter: VQSRTrancheINDEL99.90to99.95
genotype depth: GenotypeDepth
  all individuals: 2047
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14305
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1870
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4820
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8047
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5588
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3545
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 949
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5420
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2356
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1057
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 805
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15550
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5459
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2167
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 672
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 631
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 422
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1382
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 364
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: GCCTGCCGACAGCCCATGAGATGACTCCTGTACCCCTCCCTTCCCCTGCCCTCCAGCCTCCTCCCTGCACAGGCCTGCCGACAGCCCATGAGGTGACTCCTGTACCCCTCCCTTCC
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum

11-223851-TGCCGACAGCCCATGAGATGACTCCTGTACCCCTCCCTTCCCCTGCCCTCCAGCCTCCTCCCTGCAC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 223851
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 223785
    reference: chr 11
allele count: 1
allele frequency: 1.32013201320132e-5
allele num: 75750
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000372191
  ensembl transcript: ENST00000382743
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433899
  ensembl transcript: ENST00000532837
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000435464
  ensembl transcript: ENST00000525319
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000437216
  ensembl transcript: ENST00000529382
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000432937
  ensembl transcript: ENST00000524564
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433077
  ensembl transcript: ENST00000532956
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000434747
  ensembl transcript: ENST00000529937
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
canonical: false
consequence: splice region
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 3101
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2429
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8118
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 918
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13937
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1788
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4607
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4765
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5136
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 635
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 822
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3725
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1205
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3488
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2381
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2213
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1473
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4402
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1144
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 995
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: Latino
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: TGCCGACAGCCCATGAGATGACTCCTGTACCCCTCCCTTCCCCTGCCCTCCAGCCTCCTCCCTGCAC
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD

11-223852-GCCGACAGCCCATGAGATGACTCCTGTACCCCTCCCTTCCCCTGCCCTCCAGCCTCCTCCCTGCACAGGCCTGCCGACAGCCCATGAGGTGACTCCTGTACCCCTCCCTTCCCCTGCCCTCCAGACTCCT-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 223852
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 223723
    reference: chr 11
allele count: 1
allele frequency: 1.32721046903618e-5
allele num: 75346
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000437216
  ensembl transcript: ENST00000529382
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000432937
  ensembl transcript: ENST00000524564
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433077
  ensembl transcript: ENST00000532956
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000434747
  ensembl transcript: ENST00000529937
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433899
  ensembl transcript: ENST00000532837
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000435464
  ensembl transcript: ENST00000525319
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000372191
  ensembl transcript: ENST00000382743
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
canonical: false
consequence: splice region
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 1774
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13878
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8103
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4596
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5076
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4618
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2588
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3011
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2390
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3397
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 359
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4324
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1866
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 663
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1727
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1680
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 877
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1657
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 994
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
reference allele: GCCGACAGCCCATGAGATGACTCCTGTACCCCTCCCTTCCCCTGCCCTCCAGCCTCCTCCCTGCACAGGCCTGCCGACAGCCCATGAGGTGACTCCTGTACCCCTCCCTTCCCCTGCCCTCCAGACTCCT
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: InbreedingCoeff

11-223853-CCGACAGCCCA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 223853
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 223843
    reference: chr 11
allele count: 3
allele frequency: 3.992334717342702e-5
allele num: 75144
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000437216
  ensembl transcript: ENST00000529382
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433899
  ensembl transcript: ENST00000532837
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433077
  ensembl transcript: ENST00000532956
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000435464
  ensembl transcript: ENST00000525319
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000432937
  ensembl transcript: ENST00000524564
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000434747
  ensembl transcript: ENST00000529937
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000372191
  ensembl transcript: ENST00000382743
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
canonical: false
consequence: splice region
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13784
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4604
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2618
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5052
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8116
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1792
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 933
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4587
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3027
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2213
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 552
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1700
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 365
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1704
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1229
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14656
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1526
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1838
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4295
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1163
  bin: 4.25e1
  variant carriers: 0
hgvs: c.310-14_310-5delTGGGCTGTCG
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: Latino
population: Other
reference allele: CCGACAGCCCA
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: MQ

11-223853-CCGACAGCCCATGAGATGACTCCTGTACCCCTCCCTTCCCCTGCCCTCCAGCCTCCTCCCTGCACAGGCCTGCCGACAGCCCATGAGGTGACTCCTGTACCCCTCCCTTCCCCTGCCCTCCAGACTCCT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 223853
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 223725
    reference: chr 11
allele count: 1
allele frequency: 1.330778239114234e-5
allele num: 75144
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433899
  ensembl transcript: ENST00000532837
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000432937
  ensembl transcript: ENST00000524564
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000372191
  ensembl transcript: ENST00000382743
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000437216
  ensembl transcript: ENST00000529382
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000435464
  ensembl transcript: ENST00000525319
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000434747
  ensembl transcript: ENST00000529937
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433077
  ensembl transcript: ENST00000532956
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
canonical: false
consequence: splice region
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3027
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4604
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2618
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8116
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5052
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4587
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13784
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1792
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 933
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1704
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3376
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1197
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 422
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14656
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1163
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2213
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 683
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1838
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1700
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 365
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: CCGACAGCCCATGAGATGACTCCTGTACCCCTCCCTTCCCCTGCCCTCCAGCCTCCTCCCTGCACAGGCCTGCCGACAGCCCATGAGGTGACTCCTGTACCCCTCCCTTCCCCTGCCCTCCAGACTCCT
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum

11-223854-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 223854
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 223854
    reference: chr 11
allele count: 3595
allele frequency: 7.140303487725431e-2
allele num: 50348
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000434747
  ensembl transcript: ENST00000529937
  gene symbol: SIRT3
  hgvsc: ENST00000529937.1:c.310-5G>A
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433899
  ensembl transcript: ENST00000532837
  gene symbol: SIRT3
  hgvsc: ENST00000532837.1:c.*682+224G>A
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433077
  ensembl transcript: ENST00000532956
  gene symbol: SIRT3
  hgvsc: ENST00000532956.1:c.808-4813G>A
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000437216
  ensembl transcript: ENST00000529382
  gene symbol: SIRT3
  hgvsc: ENST00000529382.1:c.543+224G>A
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000435464
  ensembl transcript: ENST00000525319
  gene symbol: SIRT3
  hgvsc: ENST00000525319.1:c.726+224G>A
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000432937
  ensembl transcript: ENST00000524564
  gene symbol: SIRT3
  hgvsc: ENST00000524564.1:c.777+224G>A
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000372191
  ensembl transcript: ENST00000382743
  gene symbol: SIRT3
  hgvsc: ENST00000382743.4:c.969+224G>A
  variant of: http://identifiers.org/hgnc/14931
canonical: false
consequence: splice region
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 6.25e1
  variant carriers: 41
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 663
  bin: 4.75e1
  variant carriers: 137
genotype depth: GenotypeDepth
  all individuals: 7713
  bin: 2.75e1
  variant carriers: 469
genotype depth: GenotypeDepth
  all individuals: 5031
  bin: 1.75e1
  variant carriers: 361
genotype depth: GenotypeDepth
  all individuals: 4787
  bin: 3.25e1
  variant carriers: 409
genotype depth: GenotypeDepth
  all individuals: 2233
  bin: 3.75e1
  variant carriers: 301
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 5.75e1
  variant carriers: 42
genotype depth: GenotypeDepth
  all individuals: 12094
  bin: 2.25e1
  variant carriers: 346
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 3968
  bin: 7.5e0
  variant carriers: 1202
genotype depth: GenotypeDepth
  all individuals: 2844
  bin: 2.5e0
  variant carriers: 194
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 1375
  bin: 4.25e1
  variant carriers: 217
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 5.25e1
  variant carriers: 86
genotype depth: GenotypeDepth
  all individuals: 4909
  bin: 1.25e1
  variant carriers: 847
genotype quality: GenotypeQuality
  all individuals: 752
  bin: 7.25e1
  variant carriers: 70
genotype quality: GenotypeQuality
  all individuals: 2262
  bin: 6.75e1
  variant carriers: 63
genotype quality: GenotypeQuality
  all individuals: 14776
  bin: 2.5e0
  variant carriers: 106
genotype quality: GenotypeQuality
  all individuals: 707
  bin: 4.75e1
  variant carriers: 104
genotype quality: GenotypeQuality
  all individuals: 635
  bin: 5.25e1
  variant carriers: 79
genotype quality: GenotypeQuality
  all individuals: 574
  bin: 4.25e1
  variant carriers: 98
genotype quality: GenotypeQuality
  all individuals: 2392
  bin: 9.75e1
  variant carriers: 2146
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 9.25e1
  variant carriers: 66
genotype quality: GenotypeQuality
  all individuals: 387
  bin: 5.75e1
  variant carriers: 80
genotype quality: GenotypeQuality
  all individuals: 912
  bin: 1.25e1
  variant carriers: 128
hgvs: c.310-5G>A
num of homozygotes: 491
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: East Asian
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD

11-223855-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 223855
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 223855
    reference: chr 11
allele count: 14
allele frequency: 1.938252803544234e-4
allele num: 72230
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000372191
  ensembl transcript: ENST00000382743
  gene symbol: SIRT3
  hgvsc: ENST00000382743.4:c.969+223C>T
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000432937
  ensembl transcript: ENST00000524564
  gene symbol: SIRT3
  hgvsc: ENST00000524564.1:c.777+223C>T
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000435464
  ensembl transcript: ENST00000525319
  gene symbol: SIRT3
  hgvsc: ENST00000525319.1:c.726+223C>T
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000437216
  ensembl transcript: ENST00000529382
  gene symbol: SIRT3
  hgvsc: ENST00000529382.1:c.543+223C>T
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433077
  ensembl transcript: ENST00000532956
  gene symbol: SIRT3
  hgvsc: ENST00000532956.1:c.808-4814C>T
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000434747
  ensembl transcript: ENST00000529937
  gene symbol: SIRT3
  hgvsc: ENST00000529937.1:c.310-6C>T
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433899
  ensembl transcript: ENST00000532837
  gene symbol: SIRT3
  hgvsc: ENST00000532837.1:c.*682+223C>T
  variant of: http://identifiers.org/hgnc/14931
canonical: false
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4202
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4027
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4449
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3853
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 12215
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6084
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7810
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 635
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 591
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1811
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1210
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6772
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3825
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1369
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 669
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 744
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3641
  bin: 7.5e0
  variant carriers: 0
hgvs: c.310-6C>T
num of homozygotes: 1
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: Other
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

11-223856-A-ACAAACCTC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 223856
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 223864
    reference: chr 11
allele count: 18
allele frequency: 2.465145580541784e-4
allele num: 73018
alternate allele: ACAAACCTC
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433899
  ensembl transcript: ENST00000532837
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000432937
  ensembl transcript: ENST00000524564
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000434747
  ensembl transcript: ENST00000529937
  gene symbol: SIRT3
  hgvsc: ENST00000529937.1:c.310-8_310-7insGAGGTTTG
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000437216
  ensembl transcript: ENST00000529382
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000435464
  ensembl transcript: ENST00000525319
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433077
  ensembl transcript: ENST00000532956
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000372191
  ensembl transcript: ENST00000382743
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
canonical: false
consequence: splice region
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 6122
  bin: 1.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4335
  bin: 7.5e0
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12350
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7777
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3980
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1327
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3966
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4384
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16711
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 719
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 515
  bin: 1.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1368
  bin: 3.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 331
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 319
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1263
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1275
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 602
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3851
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6886
  bin: 2.25e1
  variant carriers: 1
hgvs: c.310-8_310-7insGAGGTTTG
num of homozygotes: 4
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
reference allele: A
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: DP
site quality: MQ
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/11-223857-C-CA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 223857
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 223858
    reference: chr 11
allele count: 6
allele frequency: 8.305647840531562e-5
allele num: 72240
alternate allele: CA
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000437216
  ensembl transcript: ENST00000529382
  gene symbol: SIRT3
  hgvsc: ENST00000529382.1:c.543+220dupT
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000372191
  ensembl transcript: ENST00000382743
  gene symbol: SIRT3
  hgvsc: ENST00000382743.4:c.969+220dupT
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000434747
  ensembl transcript: ENST00000529937
  gene symbol: SIRT3
  hgvsc: ENST00000529937.1:c.310-9dupT
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000435464
  ensembl transcript: ENST00000525319
  gene symbol: SIRT3
  hgvsc: ENST00000525319.1:c.726+220dupT
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433077
  ensembl transcript: ENST00000532956
  gene symbol: SIRT3
  hgvsc: ENST00000532956.1:c.808-4817dupT
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000432937
  ensembl transcript: ENST00000524564
  gene symbol: SIRT3
  hgvsc: ENST00000524564.1:c.777+220dupT
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433899
  ensembl transcript: ENST00000532837
  gene symbol: SIRT3
  hgvsc: ENST00000532837.1:c.*682+220dupT
  variant of: http://identifiers.org/hgnc/14931
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3894
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4342
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6096
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4248
  bin: 7.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1314
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4106
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7757
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12438
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1889
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3816
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 311
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 544
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 545
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1640
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 495
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 702
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1191
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 234
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD

11-223857-C-CAAACCTCCAGGG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 223857
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 223869
    reference: chr 11
allele count: 15
allele frequency: 2.07641196013289e-4
allele num: 72240
alternate allele: CAAACCTCCAGGG
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000372191
  ensembl transcript: ENST00000382743
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000435464
  ensembl transcript: ENST00000525319
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000432937
  ensembl transcript: ENST00000524564
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000434747
  ensembl transcript: ENST00000529937
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433899
  ensembl transcript: ENST00000532837
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000437216
  ensembl transcript: ENST00000529382
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433077
  ensembl transcript: ENST00000532956
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 4342
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12438
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3894
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4248
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7757
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6096
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4106
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 656
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1314
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 544
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 234
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 594
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17046
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6857
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1640
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 545
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1889
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 702
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3816
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3779
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 3
population: South Asian
population: Latino
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: MQ

http://identifiers.org/exac.variant/11-223858-A-AAACC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 223858
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 223862
    reference: chr 11
allele count: 9
allele frequency: 1.250243102825549e-4
allele num: 71986
alternate allele: AAACC
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000437216
  ensembl transcript: ENST00000529382
  gene symbol: SIRT3
  hgvsc: ENST00000529382.1:c.543+219_543+220insGGTT
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433077
  ensembl transcript: ENST00000532956
  gene symbol: SIRT3
  hgvsc: ENST00000532956.1:c.808-4818_808-4817insGGTT
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000372191
  ensembl transcript: ENST00000382743
  gene symbol: SIRT3
  hgvsc: ENST00000382743.4:c.969+219_969+220insGGTT
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000432937
  ensembl transcript: ENST00000524564
  gene symbol: SIRT3
  hgvsc: ENST00000524564.1:c.777+219_777+220insGGTT
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000434747
  ensembl transcript: ENST00000529937
  gene symbol: SIRT3
  hgvsc: ENST00000529937.1:c.310-10_310-9insGGTT
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433899
  ensembl transcript: ENST00000532837
  gene symbol: SIRT3
  hgvsc: ENST00000532837.1:c.*682+219_*682+220insGGTT
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000435464
  ensembl transcript: ENST00000525319
  gene symbol: SIRT3
  hgvsc: ENST00000525319.1:c.726+219_726+220insGGTT
  variant of: http://identifiers.org/hgnc/14931
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4223
  bin: 2.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 12347
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4299
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4224
  bin: 7.5e0
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 6225
  bin: 1.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3896
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1300
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7676
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 670
  bin: 4.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1364
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 580
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 419
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 570
  bin: 9.75e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 1886
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1201
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1182
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16976
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 558
  bin: 1.25e1
  variant carriers: 1
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum

11-223858-A-AAACCTCCAG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 223858
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 223867
    reference: chr 11
allele count: 8
allele frequency: 1.111327202511599e-4
allele num: 71986
alternate allele: AAACCTCCAG
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433077
  ensembl transcript: ENST00000532956
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000437216
  ensembl transcript: ENST00000529382
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000434747
  ensembl transcript: ENST00000529937
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000372191
  ensembl transcript: ENST00000382743
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433899
  ensembl transcript: ENST00000532837
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000435464
  ensembl transcript: ENST00000525319
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000432937
  ensembl transcript: ENST00000524564
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6225
  bin: 1.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12347
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4223
  bin: 2.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3896
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4299
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4224
  bin: 7.5e0
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1300
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7676
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1777
  bin: 2.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1702
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6920
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3749
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 303
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 419
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 231
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1886
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 660
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 16976
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 584
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 580
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
reference allele: A
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: DP

11-223858-A-AAACCTCCAGGGAG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 223858
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 223871
    reference: chr 11
allele count: 27
allele frequency: 3.750729308476648e-4
allele num: 71986
alternate allele: AAACCTCCAGGGAG
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000432937
  ensembl transcript: ENST00000524564
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433899
  ensembl transcript: ENST00000532837
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433077
  ensembl transcript: ENST00000532956
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000372191
  ensembl transcript: ENST00000382743
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000437216
  ensembl transcript: ENST00000529382
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000434747
  ensembl transcript: ENST00000529937
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000435464
  ensembl transcript: ENST00000525319
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 12347
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4224
  bin: 7.5e0
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 3896
  bin: 1.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 6225
  bin: 1.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 4299
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4223
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1300
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7676
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 584
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 16976
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 231
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1364
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 670
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1777
  bin: 2.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 6920
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3749
  bin: 7.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 660
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 558
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1182
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1702
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 4
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: A
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: DP

11-223858-A-AAACCTCCAGG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 223858
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 223868
    reference: chr 11
allele count: 4
allele frequency: 5.556636012557997e-5
allele num: 71986
alternate allele: AAACCTCCAGG
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000432937
  ensembl transcript: ENST00000524564
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000372191
  ensembl transcript: ENST00000382743
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000437216
  ensembl transcript: ENST00000529382
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433899
  ensembl transcript: ENST00000532837
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000434747
  ensembl transcript: ENST00000529937
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433077
  ensembl transcript: ENST00000532956
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000435464
  ensembl transcript: ENST00000525319
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3896
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4299
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6225
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12347
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4224
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4223
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7676
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1300
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 580
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 303
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16976
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1182
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 660
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1201
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3749
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 670
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1364
  bin: 3.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1702
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6920
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 558
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
reference allele: A
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: QD

11-223858-A-AAACCTCCAGGGAGGTCCCAAG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 223858
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 223879
    reference: chr 11
allele count: 2
allele frequency: 2.778318006278999e-5
allele num: 71986
alternate allele: AAACCTCCAGGGAGGTCCCAAG
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433899
  ensembl transcript: ENST00000532837
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000372191
  ensembl transcript: ENST00000382743
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433077
  ensembl transcript: ENST00000532956
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000435464
  ensembl transcript: ENST00000525319
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000437216
  ensembl transcript: ENST00000529382
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000432937
  ensembl transcript: ENST00000524564
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000434747
  ensembl transcript: ENST00000529937
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3896
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12347
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7676
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4224
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 4299
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6225
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4223
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1300
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1777
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 16976
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1886
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 670
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1182
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 570
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 231
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6920
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3749
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 580
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1364
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3820
  bin: 6.75e1
  variant carriers: 1
num of homozygotes: 1
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: African
population: South Asian
reference allele: A
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD

11-223858-AGCCCATGAGATGACTCCTGTACCCCTCCCTTCCCCTGCCCTCC-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 223858
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 223815
    reference: chr 11
allele count: 9
allele frequency: 1.250243102825549e-4
allele num: 71986
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433899
  ensembl transcript: ENST00000532837
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433077
  ensembl transcript: ENST00000532956
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000437216
  ensembl transcript: ENST00000529382
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000432937
  ensembl transcript: ENST00000524564
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000434747
  ensembl transcript: ENST00000529937
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000435464
  ensembl transcript: ENST00000525319
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000372191
  ensembl transcript: ENST00000382743
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 3896
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1300
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4299
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7676
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12347
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4223
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6225
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4224
  bin: 7.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 419
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 558
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1201
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1886
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 580
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 303
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1777
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1364
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 584
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16976
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 670
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 570
  bin: 9.75e1
  variant carriers: 9
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: AGCCCATGAGATGACTCCTGTACCCCTCCCTTCCCCTGCCCTCC
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum

11-223859-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 223859
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 223859
    reference: chr 11
allele count: 22
allele frequency: 3.173412572483628e-4
allele num: 69326
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000435464
  ensembl transcript: ENST00000525319
  gene symbol: SIRT3
  hgvsc: ENST00000525319.1:c.726+219C>T
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000432937
  ensembl transcript: ENST00000524564
  gene symbol: SIRT3
  hgvsc: ENST00000524564.1:c.777+219C>T
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000372191
  ensembl transcript: ENST00000382743
  gene symbol: SIRT3
  hgvsc: ENST00000382743.4:c.969+219C>T
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000434747
  ensembl transcript: ENST00000529937
  gene symbol: SIRT3
  hgvsc: ENST00000529937.1:c.310-10C>T
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433899
  ensembl transcript: ENST00000532837
  gene symbol: SIRT3
  hgvsc: ENST00000532837.1:c.*682+219C>T
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000437216
  ensembl transcript: ENST00000529382
  gene symbol: SIRT3
  hgvsc: ENST00000529382.1:c.543+219C>T
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433077
  ensembl transcript: ENST00000532956
  gene symbol: SIRT3
  hgvsc: ENST00000532956.1:c.808-4818C>T
  variant of: http://identifiers.org/hgnc/14931
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 7593
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4090
  bin: 7.5e0
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 6323
  bin: 1.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1253
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4501
  bin: 2.5e0
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12437
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3779
  bin: 1.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 4174
  bin: 3.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 297
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1770
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 608
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 439
  bin: 5.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 631
  bin: 1.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 3706
  bin: 7.5e0
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 2916
  bin: 2.5e0
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1224
  bin: 3.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 451
  bin: 9.75e1
  variant carriers: 31
genotype quality: GenotypeQuality
  all individuals: 1073
  bin: 7.25e1
  variant carriers: 2
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum

11-223859-G-GGGAGGT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 223859
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 223865
    reference: chr 11
allele count: 7
allele frequency: 1.009722182153882e-4
allele num: 69326
alternate allele: GGGAGGT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000437216
  ensembl transcript: ENST00000529382
  gene symbol: SIRT3
  hgvsc: ENST00000529382.1:c.543+218_543+219insACCTCC
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433899
  ensembl transcript: ENST00000532837
  gene symbol: SIRT3
  hgvsc: ENST00000532837.1:c.*682+218_*682+219insACCTCC
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000435464
  ensembl transcript: ENST00000525319
  gene symbol: SIRT3
  hgvsc: ENST00000525319.1:c.726+218_726+219insACCTCC
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000372191
  ensembl transcript: ENST00000382743
  gene symbol: SIRT3
  hgvsc: ENST00000382743.4:c.969+218_969+219insACCTCC
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433077
  ensembl transcript: ENST00000532956
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000432937
  ensembl transcript: ENST00000524564
  gene symbol: SIRT3
  hgvsc: ENST00000524564.1:c.777+218_777+219insACCTCC
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000434747
  ensembl transcript: ENST00000529937
  gene symbol: SIRT3
  hgvsc: ENST00000529937.1:c.310-11_310-10insACCTCC
  variant of: http://identifiers.org/hgnc/14931
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 3779
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12437
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4090
  bin: 7.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 4501
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6323
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1253
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4174
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7593
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3706
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1073
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 539
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16811
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3566
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1777
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 297
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6933
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 608
  bin: 4.25e1
  variant carriers: 1
num of homozygotes: 3
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: Other
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum

11-223859-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 223859
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 223859
    reference: chr 11
allele count: 10
allele frequency: 1.442460260219831e-4
allele num: 69326
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000437216
  ensembl transcript: ENST00000529382
  gene symbol: SIRT3
  hgvsc: ENST00000529382.1:c.543+219C>A
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433077
  ensembl transcript: ENST00000532956
  gene symbol: SIRT3
  hgvsc: ENST00000532956.1:c.808-4818C>A
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000432937
  ensembl transcript: ENST00000524564
  gene symbol: SIRT3
  hgvsc: ENST00000524564.1:c.777+219C>A
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433899
  ensembl transcript: ENST00000532837
  gene symbol: SIRT3
  hgvsc: ENST00000532837.1:c.*682+219C>A
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000434747
  ensembl transcript: ENST00000529937
  gene symbol: SIRT3
  hgvsc: ENST00000529937.1:c.310-10C>A
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000435464
  ensembl transcript: ENST00000525319
  gene symbol: SIRT3
  hgvsc: ENST00000525319.1:c.726+219C>A
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000372191
  ensembl transcript: ENST00000382743
  gene symbol: SIRT3
  hgvsc: ENST00000382743.4:c.969+219C>A
  variant of: http://identifiers.org/hgnc/14931
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7593
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4090
  bin: 7.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1253
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6323
  bin: 1.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 3779
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12437
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4174
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4501
  bin: 2.5e0
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3566
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 451
  bin: 9.75e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 439
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6933
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 967
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16811
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3706
  bin: 7.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 631
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1777
  bin: 2.75e1
  variant carriers: 2
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP

http://identifiers.org/exac.variant/11-223860-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 223860
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 223860
    reference: chr 11
allele count: 15
allele frequency: 2.152389151958674e-4
allele num: 69690
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000437216
  ensembl transcript: ENST00000529382
  gene symbol: SIRT3
  hgvsc: ENST00000529382.1:c.543+218G>T
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433077
  ensembl transcript: ENST00000532956
  gene symbol: SIRT3
  hgvsc: ENST00000532956.1:c.808-4819G>T
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000434747
  ensembl transcript: ENST00000529937
  gene symbol: SIRT3
  hgvsc: ENST00000529937.1:c.310-11G>T
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000432937
  ensembl transcript: ENST00000524564
  gene symbol: SIRT3
  hgvsc: ENST00000524564.1:c.777+218G>T
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000372191
  ensembl transcript: ENST00000382743
  gene symbol: SIRT3
  hgvsc: ENST00000382743.4:c.969+218G>T
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433899
  ensembl transcript: ENST00000532837
  gene symbol: SIRT3
  hgvsc: ENST00000532837.1:c.*682+218G>T
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000435464
  ensembl transcript: ENST00000525319
  gene symbol: SIRT3
  hgvsc: ENST00000525319.1:c.726+218G>T
  variant of: http://identifiers.org/hgnc/14931
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 4139
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12164
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4087
  bin: 7.5e0
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1245
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3808
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6586
  bin: 1.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 4585
  bin: 2.5e0
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7557
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3792
  bin: 7.5e0
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 16653
  bin: 6.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1827
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 599
  bin: 4.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2681
  bin: 2.5e0
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 449
  bin: 5.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 600
  bin: 1.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 1073
  bin: 7.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 528
  bin: 1.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1239
  bin: 3.75e1
  variant carriers: 2
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: C
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum

11-223860-C-CCT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 223860
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 223862
    reference: chr 11
allele count: 7
allele frequency: 1.004448270914048e-4
allele num: 69690
alternate allele: CCT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000437216
  ensembl transcript: ENST00000529382
  gene symbol: SIRT3
  hgvsc: ENST00000529382.1:c.543+217_543+218insAG
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000435464
  ensembl transcript: ENST00000525319
  gene symbol: SIRT3
  hgvsc: ENST00000525319.1:c.726+217_726+218insAG
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433077
  ensembl transcript: ENST00000532956
  gene symbol: SIRT3
  hgvsc: ENST00000532956.1:c.808-4820_808-4819insAG
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433899
  ensembl transcript: ENST00000532837
  gene symbol: SIRT3
  hgvsc: ENST00000532837.1:c.*682+217_*682+218insAG
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000434747
  ensembl transcript: ENST00000529937
  gene symbol: SIRT3
  hgvsc: ENST00000529937.1:c.310-12_310-11insAG
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000372191
  ensembl transcript: ENST00000382743
  gene symbol: SIRT3
  hgvsc: ENST00000382743.4:c.969+217_969+218insAG
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000432937
  ensembl transcript: ENST00000524564
  gene symbol: SIRT3
  hgvsc: ENST00000524564.1:c.777+217_777+218insAG
  variant of: http://identifiers.org/hgnc/14931
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4139
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7557
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4585
  bin: 2.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 6586
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12164
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1245
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4087
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3808
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1239
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 600
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 599
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 448
  bin: 9.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 247
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 535
  bin: 8.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1843
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 528
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 974
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: Other
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD

11-223860-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 223860
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 223860
    reference: chr 11
allele count: 12
allele frequency: 1.721911321566939e-4
allele num: 69690
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000437216
  ensembl transcript: ENST00000529382
  gene symbol: SIRT3
  hgvsc: ENST00000529382.1:c.543+218G>A
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000434747
  ensembl transcript: ENST00000529937
  gene symbol: SIRT3
  hgvsc: ENST00000529937.1:c.310-11G>A
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433899
  ensembl transcript: ENST00000532837
  gene symbol: SIRT3
  hgvsc: ENST00000532837.1:c.*682+218G>A
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433077
  ensembl transcript: ENST00000532956
  gene symbol: SIRT3
  hgvsc: ENST00000532956.1:c.808-4819G>A
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000432937
  ensembl transcript: ENST00000524564
  gene symbol: SIRT3
  hgvsc: ENST00000524564.1:c.777+218G>A
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000372191
  ensembl transcript: ENST00000382743
  gene symbol: SIRT3
  hgvsc: ENST00000382743.4:c.969+218G>A
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000435464
  ensembl transcript: ENST00000525319
  gene symbol: SIRT3
  hgvsc: ENST00000525319.1:c.726+218G>A
  variant of: http://identifiers.org/hgnc/14931
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1245
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12164
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7557
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6586
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4585
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4087
  bin: 7.5e0
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 4139
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3808
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3571
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1827
  bin: 3.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1843
  bin: 2.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2681
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 576
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 528
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 535
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 247
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 599
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3792
  bin: 7.5e0
  variant carriers: 1
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
population: African
population: South Asian
population: East Asian
reference allele: C
site quality: QD
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

11-223862-C-CTCCAGGG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 223862
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 223869
    reference: chr 11
allele count: 3
allele frequency: 4.162619675315665e-5
allele num: 72070
alternate allele: CTCCAGGG
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000434747
  ensembl transcript: ENST00000529937
  gene symbol: SIRT3
  hgvsc: ENST00000529937.1:c.310-14_310-13insCCCTGGA
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000372191
  ensembl transcript: ENST00000382743
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000432937
  ensembl transcript: ENST00000524564
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000435464
  ensembl transcript: ENST00000525319
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433077
  ensembl transcript: ENST00000532956
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000437216
  ensembl transcript: ENST00000529382
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433899
  ensembl transcript: ENST00000532837
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 4009
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4134
  bin: 7.5e0
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 7005
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 11625
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4721
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1230
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4077
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7459
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3739
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 337
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16280
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 570
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1159
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 562
  bin: 1.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 432
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1125
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1216
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 584
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1313
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQ

http://identifiers.org/exac.variant/11-223862-C-CA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 223862
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 223863
    reference: chr 11
allele count: 2
allele frequency: 2.775079783543777e-5
allele num: 72070
alternate allele: CA
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000434747
  ensembl transcript: ENST00000529937
  gene symbol: SIRT3
  hgvsc: ENST00000529937.1:c.310-14dupT
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000437216
  ensembl transcript: ENST00000529382
  gene symbol: SIRT3
  hgvsc: ENST00000529382.1:c.543+215dupT
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000435464
  ensembl transcript: ENST00000525319
  gene symbol: SIRT3
  hgvsc: ENST00000525319.1:c.726+215dupT
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000432937
  ensembl transcript: ENST00000524564
  gene symbol: SIRT3
  hgvsc: ENST00000524564.1:c.777+215dupT
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433899
  ensembl transcript: ENST00000532837
  gene symbol: SIRT3
  hgvsc: ENST00000532837.1:c.*682+215dupT
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433077
  ensembl transcript: ENST00000532956
  gene symbol: SIRT3
  hgvsc: ENST00000532956.1:c.808-4822dupT
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000372191
  ensembl transcript: ENST00000382743
  gene symbol: SIRT3
  hgvsc: ENST00000382743.4:c.969+215dupT
  variant of: http://identifiers.org/hgnc/14931
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 7005
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1230
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11625
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7459
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4077
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4134
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4721
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4009
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 570
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4134
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 432
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1999
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1125
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1313
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 524
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 562
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 469
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1216
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 1
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum

11-223864-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 223864
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 223864
    reference: chr 11
allele count: 0
allele frequency: 0.0e0
allele num: 69784
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000372191
  ensembl transcript: ENST00000382743
  gene symbol: SIRT3
  hgvsc: ENST00000382743.4:c.969+214A>T
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000435464
  ensembl transcript: ENST00000525319
  gene symbol: SIRT3
  hgvsc: ENST00000525319.1:c.726+214A>T
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000437216
  ensembl transcript: ENST00000529382
  gene symbol: SIRT3
  hgvsc: ENST00000529382.1:c.543+214A>T
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000432937
  ensembl transcript: ENST00000524564
  gene symbol: SIRT3
  hgvsc: ENST00000524564.1:c.777+214A>T
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000434747
  ensembl transcript: ENST00000529937
  gene symbol: SIRT3
  hgvsc: ENST00000529937.1:c.310-15A>T
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433077
  ensembl transcript: ENST00000532956
  gene symbol: SIRT3
  hgvsc: ENST00000532956.1:c.808-4823A>T
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433899
  ensembl transcript: ENST00000532837
  gene symbol: SIRT3
  hgvsc: ENST00000532837.1:c.*682+214A>T
  variant of: http://identifiers.org/hgnc/14931
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1228
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4081
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4062
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4731
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4083
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11430
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7104
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7421
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15887
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 573
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 531
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1261
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 946
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1979
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 245
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 515
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3538
  bin: 6.75e1
  variant carriers: 1
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: T
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum

11-223864-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 223864
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 223864
    reference: chr 11
allele count: 0
allele frequency: 0.0e0
allele num: 69784
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000432937
  ensembl transcript: ENST00000524564
  gene symbol: SIRT3
  hgvsc: ENST00000524564.1:c.777+214A>C
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000372191
  ensembl transcript: ENST00000382743
  gene symbol: SIRT3
  hgvsc: ENST00000382743.4:c.969+214A>C
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000437216
  ensembl transcript: ENST00000529382
  gene symbol: SIRT3
  hgvsc: ENST00000529382.1:c.543+214A>C
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000434747
  ensembl transcript: ENST00000529937
  gene symbol: SIRT3
  hgvsc: ENST00000529937.1:c.310-15A>C
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433077
  ensembl transcript: ENST00000532956
  gene symbol: SIRT3
  hgvsc: ENST00000532956.1:c.808-4823A>C
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433899
  ensembl transcript: ENST00000532837
  gene symbol: SIRT3
  hgvsc: ENST00000532837.1:c.*682+214A>C
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000435464
  ensembl transcript: ENST00000525319
  gene symbol: SIRT3
  hgvsc: ENST00000525319.1:c.726+214A>C
  variant of: http://identifiers.org/hgnc/14931
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11430
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4081
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4731
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1228
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7421
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7104
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4062
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4083
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 946
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 521
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15887
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 578
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3538
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1979
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 531
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3963
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1028
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7734
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: DP

11-223864-TGAGATGACTCCTGTACCCCTCCCTTCCCCTGCCCTCCAGCCTCCTCCCTGCACAGGCCTGCC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 223864
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 223802
    reference: chr 11
allele count: 4
allele frequency: 5.731972945087699e-5
allele num: 69784
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000435464
  ensembl transcript: ENST00000525319
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000432937
  ensembl transcript: ENST00000524564
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000434747
  ensembl transcript: ENST00000529937
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000372191
  ensembl transcript: ENST00000382743
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000437216
  ensembl transcript: ENST00000529382
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433077
  ensembl transcript: ENST00000532956
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433899
  ensembl transcript: ENST00000532837
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1228
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4731
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7104
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4062
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7421
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11430
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4081
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4083
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 616
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 573
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7734
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3538
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 578
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 375
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 516
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 245
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15887
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 414
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1979
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 531
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1949
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: TGAGATGACTCCTGTACCCCTCCCTTCCCCTGCCCTCCAGCCTCCTCCCTGCACAGGCCTGCC
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: MQ
site quality: ClippingRankSum

11-223876-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 223876
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 223876
    reference: chr 11
allele count: 1
allele frequency: 1.43348623853211e-5
allele num: 69760
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000432937
  ensembl transcript: ENST00000524564
  gene symbol: SIRT3
  hgvsc: ENST00000524564.1:c.777+202A>T
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000372191
  ensembl transcript: ENST00000382743
  gene symbol: SIRT3
  hgvsc: ENST00000382743.4:c.969+202A>T
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000435464
  ensembl transcript: ENST00000525319
  gene symbol: SIRT3
  hgvsc: ENST00000525319.1:c.726+202A>T
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433899
  ensembl transcript: ENST00000532837
  gene symbol: SIRT3
  hgvsc: ENST00000532837.1:c.*682+202A>T
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000437216
  ensembl transcript: ENST00000529382
  gene symbol: SIRT3
  hgvsc: ENST00000529382.1:c.543+202A>T
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000434747
  ensembl transcript: ENST00000529937
  gene symbol: SIRT3
  hgvsc: ENST00000529937.1:c.310-27A>T
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433077
  ensembl transcript: ENST00000532956
  gene symbol: SIRT3
  hgvsc: ENST00000532956.1:c.808-4835A>T
  variant of: http://identifiers.org/hgnc/14931
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5274
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3788
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 575
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8667
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1219
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5127
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5770
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9563
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6451
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 448
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 995
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 901
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 506
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1500
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1513
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13550
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 506
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 525
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
reference allele: T
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD

11-223895-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 223895
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 223895
    reference: chr 11
allele count: 2
allele frequency: 3.207081235367692e-5
allele num: 62362
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000372191
  ensembl transcript: ENST00000382743
  gene symbol: SIRT3
  hgvsc: ENST00000382743.4:c.969+183C>T
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000435464
  ensembl transcript: ENST00000525319
  gene symbol: SIRT3
  hgvsc: ENST00000525319.1:c.726+183C>T
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000434747
  ensembl transcript: ENST00000529937
  gene symbol: SIRT3
  hgvsc: ENST00000529937.1:c.310-46C>T
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000437216
  ensembl transcript: ENST00000529382
  gene symbol: SIRT3
  hgvsc: ENST00000529382.1:c.543+183C>T
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433077
  ensembl transcript: ENST00000532956
  gene symbol: SIRT3
  hgvsc: ENST00000532956.1:c.808-4854C>T
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000432937
  ensembl transcript: ENST00000524564
  gene symbol: SIRT3
  hgvsc: ENST00000524564.1:c.777+183C>T
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433899
  ensembl transcript: ENST00000532837
  gene symbol: SIRT3
  hgvsc: ENST00000532837.1:c.*682+183C>T
  variant of: http://identifiers.org/hgnc/14931
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 910
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5196
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8263
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4434
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6433
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7769
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9806
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2544
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1557
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 824
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6227
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2162
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 371
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1522
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 763
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9362
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2349
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP

11-223897-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 223897
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 223897
    reference: chr 11
allele count: 0
allele frequency: 0.0e0
allele num: 59358
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000434747
  ensembl transcript: ENST00000529937
  gene symbol: SIRT3
  hgvsc: ENST00000529937.1:c.310-48G>A
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000372191
  ensembl transcript: ENST00000382743
  gene symbol: SIRT3
  hgvsc: ENST00000382743.4:c.969+181G>A
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433077
  ensembl transcript: ENST00000532956
  gene symbol: SIRT3
  hgvsc: ENST00000532956.1:c.808-4856G>A
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000435464
  ensembl transcript: ENST00000525319
  gene symbol: SIRT3
  hgvsc: ENST00000525319.1:c.726+181G>A
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000432937
  ensembl transcript: ENST00000524564
  gene symbol: SIRT3
  hgvsc: ENST00000524564.1:c.777+181G>A
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433899
  ensembl transcript: ENST00000532837
  gene symbol: SIRT3
  hgvsc: ENST00000532837.1:c.*682+181G>A
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000437216
  ensembl transcript: ENST00000529382
  gene symbol: SIRT3
  hgvsc: ENST00000529382.1:c.543+181G>A
  variant of: http://identifiers.org/hgnc/14931
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4277
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9626
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8117
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2684
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7867
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6098
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5367
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2424
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1665
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2912
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7808
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3040
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 769
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3138
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 491
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5019
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1047
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: DP

11-224017-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224017
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 224017
    reference: chr 11
allele count: 2
allele frequency: 1.73457528924043e-5
allele num: 115302
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000434747
  ensembl transcript: ENST00000529937
  gene symbol: SIRT3
  hgvsc: ENST00000529937.1:c.309+49A>T
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000435464
  ensembl transcript: ENST00000525319
  gene symbol: SIRT3
  hgvsc: ENST00000525319.1:c.726+61A>T
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000437216
  ensembl transcript: ENST00000529382
  gene symbol: SIRT3
  hgvsc: ENST00000529382.1:c.543+61A>T
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000372191
  ensembl transcript: ENST00000382743
  gene symbol: SIRT3
  hgvsc: ENST00000382743.4:c.969+61A>T
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000432937
  ensembl transcript: ENST00000524564
  gene symbol: SIRT3
  hgvsc: ENST00000524564.1:c.777+61A>T
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433077
  ensembl transcript: ENST00000532956
  gene symbol: SIRT3
  hgvsc: ENST00000532956.1:c.808-4976A>T
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433899
  ensembl transcript: ENST00000532837
  gene symbol: SIRT3
  hgvsc: ENST00000532837.1:c.*682+61A>T
  variant of: http://identifiers.org/hgnc/14931
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9721
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20030
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8325
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 906
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1771
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2470
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1088
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1461
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2870
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3113
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2036
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1423
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1281
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1000
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1588
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6681
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 261
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2481
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 361
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 681
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 853
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 438
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1090
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23584
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum

11-224026-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224026
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 224026
    reference: chr 11
allele count: 2
allele frequency: 1.728907330567082e-5
allele num: 115680
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000432937
  ensembl transcript: ENST00000524564
  gene symbol: SIRT3
  hgvsc: ENST00000524564.1:c.777+52G>C
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000437216
  ensembl transcript: ENST00000529382
  gene symbol: SIRT3
  hgvsc: ENST00000529382.1:c.543+52G>C
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433899
  ensembl transcript: ENST00000532837
  gene symbol: SIRT3
  hgvsc: ENST00000532837.1:c.*682+52G>C
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000434747
  ensembl transcript: ENST00000529937
  gene symbol: SIRT3
  hgvsc: ENST00000529937.1:c.309+40G>C
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000372191
  ensembl transcript: ENST00000382743
  gene symbol: SIRT3
  hgvsc: ENST00000382743.4:c.969+52G>C
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433077
  ensembl transcript: ENST00000532956
  gene symbol: SIRT3
  hgvsc: ENST00000532956.1:c.808-4985G>C
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000435464
  ensembl transcript: ENST00000525319
  gene symbol: SIRT3
  hgvsc: ENST00000525319.1:c.726+52G>C
  variant of: http://identifiers.org/hgnc/14931
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 899
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11941
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1084
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2071
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2923
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8689
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1787
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20487
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1382
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1656
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1283
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1012
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1461
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 902
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 530
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 256
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1282
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 323
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 836
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 752
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 821
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26317
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2030
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: FS

11-224027-CT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224027
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 224026
    reference: chr 11
allele count: 2
allele frequency: 1.727473742399115e-5
allele num: 115776
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000372191
  ensembl transcript: ENST00000382743
  gene symbol: SIRT3
  hgvsc: ENST00000382743.4:c.969+50delA
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000434747
  ensembl transcript: ENST00000529937
  gene symbol: SIRT3
  hgvsc: ENST00000529937.1:c.309+38delA
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000432937
  ensembl transcript: ENST00000524564
  gene symbol: SIRT3
  hgvsc: ENST00000524564.1:c.777+50delA
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433899
  ensembl transcript: ENST00000532837
  gene symbol: SIRT3
  hgvsc: ENST00000532837.1:c.*682+50delA
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000435464
  ensembl transcript: ENST00000525319
  gene symbol: SIRT3
  hgvsc: ENST00000525319.1:c.726+50delA
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433077
  ensembl transcript: ENST00000532956
  gene symbol: SIRT3
  hgvsc: ENST00000532956.1:c.808-4987delA
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000437216
  ensembl transcript: ENST00000529382
  gene symbol: SIRT3
  hgvsc: ENST00000529382.1:c.543+50delA
  variant of: http://identifiers.org/hgnc/14931
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 8695
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1283
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1371
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2069
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1012
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1545
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1082
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20550
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1463
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2925
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1788
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12106
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1301
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 319
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2518
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26626
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 819
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1211
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 615
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: Latino
population: South Asian
reference allele: CT
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: QD

11-224039-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224039
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 224039
    reference: chr 11
allele count: 1
allele frequency: 8.570008398608231e-6
allele num: 116686
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000372191
  ensembl transcript: ENST00000382743
  gene symbol: SIRT3
  hgvsc: ENST00000382743.4:c.969+39C>A
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000437216
  ensembl transcript: ENST00000529382
  gene symbol: SIRT3
  hgvsc: ENST00000529382.1:c.543+39C>A
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000435464
  ensembl transcript: ENST00000525319
  gene symbol: SIRT3
  hgvsc: ENST00000525319.1:c.726+39C>A
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433899
  ensembl transcript: ENST00000532837
  gene symbol: SIRT3
  hgvsc: ENST00000532837.1:c.*682+39C>A
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000434747
  ensembl transcript: ENST00000529937
  gene symbol: SIRT3
  hgvsc: ENST00000529937.1:c.309+27C>A
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000432937
  ensembl transcript: ENST00000524564
  gene symbol: SIRT3
  hgvsc: ENST00000524564.1:c.777+39C>A
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433077
  ensembl transcript: ENST00000532956
  gene symbol: SIRT3
  hgvsc: ENST00000532956.1:c.808-4998C>A
  variant of: http://identifiers.org/hgnc/14931
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1467
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1280
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13126
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8863
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1018
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1126
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20971
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2950
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1084
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2075
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1808
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 873
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1694
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27983
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2598
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 794
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 351
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: African
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum

http://identifiers.org/exac.variant/11-224040-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224040
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 224040
    reference: chr 11
allele count: 1
allele frequency: 8.559445347941453e-6
allele num: 116830
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433899
  ensembl transcript: ENST00000532837
  gene symbol: SIRT3
  hgvsc: ENST00000532837.1:c.*682+38G>T
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000437216
  ensembl transcript: ENST00000529382
  gene symbol: SIRT3
  hgvsc: ENST00000529382.1:c.543+38G>T
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000432937
  ensembl transcript: ENST00000524564
  gene symbol: SIRT3
  hgvsc: ENST00000524564.1:c.777+38G>T
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000372191
  ensembl transcript: ENST00000382743
  gene symbol: SIRT3
  hgvsc: ENST00000382743.4:c.969+38G>T
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433077
  ensembl transcript: ENST00000532956
  gene symbol: SIRT3
  hgvsc: ENST00000532956.1:c.808-4999G>T
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000434747
  ensembl transcript: ENST00000529937
  gene symbol: SIRT3
  hgvsc: ENST00000529937.1:c.309+26G>T
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000435464
  ensembl transcript: ENST00000525319
  gene symbol: SIRT3
  hgvsc: ENST00000525319.1:c.726+38G>T
  variant of: http://identifiers.org/hgnc/14931
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1282
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1096
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20994
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1084
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1807
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2074
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8880
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1018
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2955
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13189
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1465
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 276
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7234
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 341
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1693
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 764
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1138
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/11-224048-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224048
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 224048
    reference: chr 11
allele count: 6
allele frequency: 7.449899426357744e-5
allele num: 80538
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433899
  ensembl transcript: ENST00000532837
  gene symbol: SIRT3
  hgvsc: ENST00000532837.1:c.*682+30G>T
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000432937
  ensembl transcript: ENST00000524564
  gene symbol: SIRT3
  hgvsc: ENST00000524564.1:c.777+30G>T
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000434747
  ensembl transcript: ENST00000529937
  gene symbol: SIRT3
  hgvsc: ENST00000529937.1:c.309+18G>T
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433077
  ensembl transcript: ENST00000532956
  gene symbol: SIRT3
  hgvsc: ENST00000532956.1:c.808-5007G>T
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000437216
  ensembl transcript: ENST00000529382
  gene symbol: SIRT3
  hgvsc: ENST00000529382.1:c.543+30G>T
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000435464
  ensembl transcript: ENST00000525319
  gene symbol: SIRT3
  hgvsc: ENST00000525319.1:c.726+30G>T
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000372191
  ensembl transcript: ENST00000382743
  gene symbol: SIRT3
  hgvsc: ENST00000382743.4:c.969+30G>T
  variant of: http://identifiers.org/hgnc/14931
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 953
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1078
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1196
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18852
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1188
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1245
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6676
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9411
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6764
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1000
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1582
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1059
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 995
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1230
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1120
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1480
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1424
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 709
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 1
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff

11-224049-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224049
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 224049
    reference: chr 11
allele count: 1
allele frequency: 8.462671157524161e-6
allele num: 118166
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433077
  ensembl transcript: ENST00000532956
  gene symbol: SIRT3
  hgvsc: ENST00000532956.1:c.808-5008G>A
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000434747
  ensembl transcript: ENST00000529937
  gene symbol: SIRT3
  hgvsc: ENST00000529937.1:c.309+17G>A
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000372191
  ensembl transcript: ENST00000382743
  gene symbol: SIRT3
  hgvsc: ENST00000382743.4:c.969+29G>A
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000432937
  ensembl transcript: ENST00000524564
  gene symbol: SIRT3
  hgvsc: ENST00000524564.1:c.777+29G>A
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000435464
  ensembl transcript: ENST00000525319
  gene symbol: SIRT3
  hgvsc: ENST00000525319.1:c.726+29G>A
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000437216
  ensembl transcript: ENST00000529382
  gene symbol: SIRT3
  hgvsc: ENST00000529382.1:c.543+29G>A
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433899
  ensembl transcript: ENST00000532837
  gene symbol: SIRT3
  hgvsc: ENST00000532837.1:c.*682+29G>A
  variant of: http://identifiers.org/hgnc/14931
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10028
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1729
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28532
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12677
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 231
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1081
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 418
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 358
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 758
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5346
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 161
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: Other
population: South Asian
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: QD

11-224056-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224056
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 224056
    reference: chr 11
allele count: 2
allele frequency: 1.660660610790973e-5
allele num: 120434
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433899
  ensembl transcript: ENST00000532837
  gene symbol: SIRT3
  hgvsc: ENST00000532837.1:c.*682+22G>A
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000435464
  ensembl transcript: ENST00000525319
  gene symbol: SIRT3
  hgvsc: ENST00000525319.1:c.726+22G>A
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000434747
  ensembl transcript: ENST00000529937
  gene symbol: SIRT3
  hgvsc: ENST00000529937.1:c.309+10G>A
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433077
  ensembl transcript: ENST00000532956
  gene symbol: SIRT3
  hgvsc: ENST00000532956.1:c.808-5015G>A
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000432937
  ensembl transcript: ENST00000524564
  gene symbol: SIRT3
  hgvsc: ENST00000524564.1:c.777+22G>A
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000437216
  ensembl transcript: ENST00000529382
  gene symbol: SIRT3
  hgvsc: ENST00000529382.1:c.543+22G>A
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000372191
  ensembl transcript: ENST00000382743
  gene symbol: SIRT3
  hgvsc: ENST00000382743.4:c.969+22G>A
  variant of: http://identifiers.org/hgnc/14931
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 471
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10032
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28600
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 834
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1723
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1117
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 12854
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6316
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 538
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37756
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 361
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD

11-224063-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224063
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 224063
    reference: chr 11
allele count: 6795
allele frequency: 5.634328358208955e-2
allele num: 120600
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000372191
  ensembl transcript: ENST00000382743
  gene symbol: SIRT3
  hgvsc: ENST00000382743.4:c.969+15C>T
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433077
  ensembl transcript: ENST00000532956
  gene symbol: SIRT3
  hgvsc: ENST00000532956.1:c.808-5022C>T
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000432937
  ensembl transcript: ENST00000524564
  gene symbol: SIRT3
  hgvsc: ENST00000524564.1:c.777+15C>T
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000434747
  ensembl transcript: ENST00000529937
  gene symbol: SIRT3
  hgvsc: ENST00000529937.1:c.309+3C>T
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000437216
  ensembl transcript: ENST00000529382
  gene symbol: SIRT3
  hgvsc: ENST00000529382.1:c.543+15C>T
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000435464
  ensembl transcript: ENST00000525319
  gene symbol: SIRT3
  hgvsc: ENST00000525319.1:c.726+15C>T
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433899
  ensembl transcript: ENST00000532837
  gene symbol: SIRT3
  hgvsc: ENST00000532837.1:c.*682+15C>T
  variant of: http://identifiers.org/hgnc/14931
canonical: false
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 1.25e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 28458
  bin: 2.75e1
  variant carriers: 84
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 6.75e1
  variant carriers: 176
genotype depth: GenotypeDepth
  all individuals: 311
  bin: 5.25e1
  variant carriers: 184
genotype depth: GenotypeDepth
  all individuals: 9788
  bin: 3.25e1
  variant carriers: 125
genotype depth: GenotypeDepth
  all individuals: 1496
  bin: 3.75e1
  variant carriers: 150
genotype depth: GenotypeDepth
  all individuals: 12729
  bin: 2.25e1
  variant carriers: 73
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 6.25e1
  variant carriers: 167
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 7.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 9.25e1
  variant carriers: 310
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 4.75e1
  variant carriers: 174
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 7.75e1
  variant carriers: 216
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 1.75e1
  variant carriers: 51
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 4.25e1
  variant carriers: 177
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 7.25e1
  variant carriers: 177
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 8.75e1
  variant carriers: 296
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 5.75e1
  variant carriers: 157
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 8.25e1
  variant carriers: 270
genotype depth: GenotypeDepth
  all individuals: 3860
  bin: 9.75e1
  variant carriers: 3708
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 8.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 387
  bin: 2.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 2132
  bin: 7.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 264
  bin: 9.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 2063
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 2.5e0
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
hgvs: c.309+3C>T
num of homozygotes: 281
population: Latino
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD

11-224064-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224064
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 224064
    reference: chr 11
allele count: 1
allele frequency: 8.285553309249991e-6
allele num: 120692
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000434747
  ensembl transcript: ENST00000529937
  gene symbol: SIRT3
  hgvsc: ENST00000529937.1:c.309+2C>A
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000437216
  ensembl transcript: ENST00000529382
  gene symbol: SIRT3
  hgvsc: ENST00000529382.1:c.543+14C>A
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000435464
  ensembl transcript: ENST00000525319
  gene symbol: SIRT3
  hgvsc: ENST00000525319.1:c.726+14C>A
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433899
  ensembl transcript: ENST00000532837
  gene symbol: SIRT3
  hgvsc: ENST00000532837.1:c.*682+14C>A
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000372191
  ensembl transcript: ENST00000382743
  gene symbol: SIRT3
  hgvsc: ENST00000382743.4:c.969+14C>A
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000432937
  ensembl transcript: ENST00000524564
  gene symbol: SIRT3
  hgvsc: ENST00000524564.1:c.777+14C>A
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433077
  ensembl transcript: ENST00000532956
  gene symbol: SIRT3
  hgvsc: ENST00000532956.1:c.808-5023C>A
  variant of: http://identifiers.org/hgnc/14931
canonical: false
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13793
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10988
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31895
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1536
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 313
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 293
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2429
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2372
  bin: 7.25e1
  variant carriers: 0
hgvs: c.309+2C>A
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS

11-224067-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224067
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 224067
    reference: chr 11
allele count: 1
allele frequency: 8.282533792737874e-6
allele num: 120736
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000435464
  ensembl transcript: ENST00000525319
  gene symbol: SIRT3
  hgvsc: ENST00000525319.1:c.726+11A>C
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000434747
  ensembl transcript: ENST00000529937
  gene symbol: SIRT3
  hgvsc: ENST00000529937.1:c.308A>C
  hgvsp: ENSP00000434747.1:p.Gln103Pro
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433077
  ensembl transcript: ENST00000532956
  gene symbol: SIRT3
  hgvsc: ENST00000532956.1:c.808-5026A>C
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000437216
  ensembl transcript: ENST00000529382
  gene symbol: SIRT3
  hgvsc: ENST00000529382.1:c.543+11A>C
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000432937
  ensembl transcript: ENST00000524564
  gene symbol: SIRT3
  hgvsc: ENST00000524564.1:c.777+11A>C
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000372191
  ensembl transcript: ENST00000382743
  gene symbol: SIRT3
  hgvsc: ENST00000382743.4:c.969+11A>C
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433899
  ensembl transcript: ENST00000532837
  gene symbol: SIRT3
  hgvsc: ENST00000532837.1:c.*682+11A>C
  variant of: http://identifiers.org/hgnc/14931
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13819
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10989
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1537
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31931
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9750
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 290
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2377
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Gln103Pro
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: T
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum

11-224070-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224070
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 224070
    reference: chr 11
allele count: 2
allele frequency: 1.656012983141788e-5
allele num: 120772
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000372191
  ensembl transcript: ENST00000382743
  gene symbol: SIRT3
  hgvsc: ENST00000382743.4:c.969+8A>G
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000435464
  ensembl transcript: ENST00000525319
  gene symbol: SIRT3
  hgvsc: ENST00000525319.1:c.726+8A>G
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000432937
  ensembl transcript: ENST00000524564
  gene symbol: SIRT3
  hgvsc: ENST00000524564.1:c.777+8A>G
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000434747
  ensembl transcript: ENST00000529937
  gene symbol: SIRT3
  hgvsc: ENST00000529937.1:c.305A>G
  hgvsp: ENSP00000434747.1:p.Gln102Arg
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433077
  ensembl transcript: ENST00000532956
  gene symbol: SIRT3
  hgvsc: ENST00000532956.1:c.808-5029A>G
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000437216
  ensembl transcript: ENST00000529382
  gene symbol: SIRT3
  hgvsc: ENST00000529382.1:c.543+8A>G
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433899
  ensembl transcript: ENST00000532837
  gene symbol: SIRT3
  hgvsc: ENST00000532837.1:c.*682+8A>G
  variant of: http://identifiers.org/hgnc/14931
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 31966
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1537
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11004
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13833
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 344
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9743
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2370
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Gln102Arg
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: Other
reference allele: T
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

11-224079-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224079
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 224079
    reference: chr 11
allele count: 1
allele frequency: 8.27417299640901e-6
allele num: 120858
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000434747
  ensembl transcript: ENST00000529937
  gene symbol: SIRT3
  hgvsc: ENST00000529937.1:c.296A>C
  hgvsp: ENSP00000434747.1:p.Glu99Ala
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433899
  ensembl transcript: ENST00000532837
  gene symbol: SIRT3
  hgvsc: ENST00000532837.1:c.*681A>C
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000437216
  ensembl transcript: ENST00000529382
  gene symbol: SIRT3
  hgvsc: ENST00000529382.1:c.542A>C
  hgvsp: ENSP00000437216.1:p.Glu181Ala
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000435464
  ensembl transcript: ENST00000525319
  gene symbol: SIRT3
  hgvsc: ENST00000525319.1:c.725A>C
  hgvsp: ENSP00000435464.1:p.Glu242Ala
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433077
  ensembl transcript: ENST00000532956
  gene symbol: SIRT3
  hgvsc: ENST00000532956.1:c.808-5038A>C
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000432937
  ensembl transcript: ENST00000524564
  gene symbol: SIRT3
  hgvsc: ENST00000524564.1:c.776A>C
  hgvsp: ENSP00000432937.1:p.Glu259Ala
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000372191
  ensembl transcript: ENST00000382743
  gene symbol: SIRT3
  hgvsc: ENST00000382743.4:c.968A>C
  hgvsp: ENSP00000372191.4:p.Glu323Ala
  variant of: http://identifiers.org/hgnc/14931
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 246
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32023
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1536
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13891
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10992
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2411
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 315
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Glu323Ala
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum

11-224087-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224087
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 224087
    reference: chr 11
allele count: 1
allele frequency: 8.26541913940456e-6
allele num: 120986
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433899
  ensembl transcript: ENST00000532837
  gene symbol: SIRT3
  hgvsc: ENST00000532837.1:c.*673C>T
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000434747
  ensembl transcript: ENST00000529937
  gene symbol: SIRT3
  hgvsc: ENST00000529937.1:c.288C>T
  hgvsp: ENST00000529937.1:c.288C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000372191
  ensembl transcript: ENST00000382743
  gene symbol: SIRT3
  hgvsc: ENST00000382743.4:c.960C>T
  hgvsp: ENST00000382743.4:c.960C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000435464
  ensembl transcript: ENST00000525319
  gene symbol: SIRT3
  hgvsc: ENST00000525319.1:c.717C>T
  hgvsp: ENST00000525319.1:c.717C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433077
  ensembl transcript: ENST00000532956
  gene symbol: SIRT3
  hgvsc: ENST00000532956.1:c.808-5046C>T
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000432937
  ensembl transcript: ENST00000524564
  gene symbol: SIRT3
  hgvsc: ENST00000524564.1:c.768C>T
  hgvsp: ENST00000524564.1:c.768C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000437216
  ensembl transcript: ENST00000529382
  gene symbol: SIRT3
  hgvsc: ENST00000529382.1:c.534C>T
  hgvsp: ENST00000529382.1:c.534C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14931
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32074
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13990
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11000
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1538
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9760
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 250
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 289
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2411
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2362
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Thr320Thr
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: FS
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD

11-224095-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224095
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 224095
    reference: chr 11
allele count: 1
allele frequency: 8.261185645363822e-6
allele num: 121048
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000372191
  ensembl transcript: ENST00000382743
  gene symbol: SIRT3
  hgvsc: ENST00000382743.4:c.952C>T
  hgvsp: ENSP00000372191.4:p.Leu318Phe
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000432937
  ensembl transcript: ENST00000524564
  gene symbol: SIRT3
  hgvsc: ENST00000524564.1:c.760C>T
  hgvsp: ENSP00000432937.1:p.Leu254Phe
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000437216
  ensembl transcript: ENST00000529382
  gene symbol: SIRT3
  hgvsc: ENST00000529382.1:c.526C>T
  hgvsp: ENSP00000437216.1:p.Leu176Phe
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000434747
  ensembl transcript: ENST00000529937
  gene symbol: SIRT3
  hgvsc: ENST00000529937.1:c.280C>T
  hgvsp: ENSP00000434747.1:p.Leu94Phe
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433077
  ensembl transcript: ENST00000532956
  gene symbol: SIRT3
  hgvsc: ENST00000532956.1:c.808-5054C>T
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433899
  ensembl transcript: ENST00000532837
  gene symbol: SIRT3
  hgvsc: ENST00000532837.1:c.*665C>T
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000435464
  ensembl transcript: ENST00000525319
  gene symbol: SIRT3
  hgvsc: ENST00000525319.1:c.709C>T
  hgvsp: ENSP00000435464.1:p.Leu237Phe
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142082
  ensembl transcript: ENST00000531753
  gene symbol: SIRT3
  hgvsc: ENST00000531753.1:n.588C>T
  variant of: http://identifiers.org/hgnc/14931
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14002
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1536
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32107
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10998
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 288
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 308
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Leu318Phe
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: QD

11-224105-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224105
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 224105
    reference: chr 11
allele count: 1
allele frequency: 8.259002312520648e-6
allele num: 121080
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000437216
  ensembl transcript: ENST00000529382
  gene symbol: SIRT3
  hgvsc: ENST00000529382.1:c.516G>A
  hgvsp: ENST00000529382.1:c.516G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000434747
  ensembl transcript: ENST00000529937
  gene symbol: SIRT3
  hgvsc: ENST00000529937.1:c.270G>A
  hgvsp: ENST00000529937.1:c.270G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000372191
  ensembl transcript: ENST00000382743
  gene symbol: SIRT3
  hgvsc: ENST00000382743.4:c.942G>A
  hgvsp: ENST00000382743.4:c.942G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433899
  ensembl transcript: ENST00000532837
  gene symbol: SIRT3
  hgvsc: ENST00000532837.1:c.*655G>A
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000435464
  ensembl transcript: ENST00000525319
  gene symbol: SIRT3
  hgvsc: ENST00000525319.1:c.699G>A
  hgvsp: ENST00000525319.1:c.699G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000432937
  ensembl transcript: ENST00000524564
  gene symbol: SIRT3
  hgvsc: ENST00000524564.1:c.750G>A
  hgvsp: ENST00000524564.1:c.750G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142082
  ensembl transcript: ENST00000531753
  gene symbol: SIRT3
  hgvsc: ENST00000531753.1:n.578G>A
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433077
  ensembl transcript: ENST00000532956
  gene symbol: SIRT3
  hgvsc: ENST00000532956.1:c.808-5064G>A
  variant of: http://identifiers.org/hgnc/14931
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1537
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14006
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10995
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32125
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 308
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Leu314Leu
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

11-224114-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224114
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 224114
    reference: chr 11
allele count: 1
allele frequency: 8.25695648583932e-6
allele num: 121110
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000435464
  ensembl transcript: ENST00000525319
  gene symbol: SIRT3
  hgvsc: ENST00000525319.1:c.690G>A
  hgvsp: ENSP00000435464.1:p.Met230Ile
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433899
  ensembl transcript: ENST00000532837
  gene symbol: SIRT3
  hgvsc: ENST00000532837.1:c.*646G>A
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142082
  ensembl transcript: ENST00000531753
  gene symbol: SIRT3
  hgvsc: ENST00000531753.1:n.569G>A
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000434747
  ensembl transcript: ENST00000529937
  gene symbol: SIRT3
  hgvsc: ENST00000529937.1:c.261G>A
  hgvsp: ENSP00000434747.1:p.Met87Ile
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433077
  ensembl transcript: ENST00000532956
  gene symbol: SIRT3
  hgvsc: ENST00000532956.1:c.808-5073G>A
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000432937
  ensembl transcript: ENST00000524564
  gene symbol: SIRT3
  hgvsc: ENST00000524564.1:c.741G>A
  hgvsp: ENSP00000432937.1:p.Met247Ile
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000437216
  ensembl transcript: ENST00000529382
  gene symbol: SIRT3
  hgvsc: ENST00000529382.1:c.507G>A
  hgvsp: ENSP00000437216.1:p.Met169Ile
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000372191
  ensembl transcript: ENST00000382743
  gene symbol: SIRT3
  hgvsc: ENST00000382743.4:c.933G>A
  hgvsp: ENSP00000372191.4:p.Met311Ile
  variant of: http://identifiers.org/hgnc/14931
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13983
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10991
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1534
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32140
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9757
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 287
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Met311Ile
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS

11-224136-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224136
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 224136
    reference: chr 11
allele count: 1
allele frequency: 8.256547442121603e-6
allele num: 121116
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000372191
  ensembl transcript: ENST00000382743
  gene symbol: SIRT3
  hgvsc: ENST00000382743.4:c.911T>C
  hgvsp: ENSP00000372191.4:p.Leu304Pro
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433899
  ensembl transcript: ENST00000532837
  gene symbol: SIRT3
  hgvsc: ENST00000532837.1:c.*624T>C
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000432937
  ensembl transcript: ENST00000524564
  gene symbol: SIRT3
  hgvsc: ENST00000524564.1:c.719T>C
  hgvsp: ENSP00000432937.1:p.Leu240Pro
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433077
  ensembl transcript: ENST00000532956
  gene symbol: SIRT3
  hgvsc: ENST00000532956.1:c.808-5095T>C
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000437216
  ensembl transcript: ENST00000529382
  gene symbol: SIRT3
  hgvsc: ENST00000529382.1:c.485T>C
  hgvsp: ENSP00000437216.1:p.Leu162Pro
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000435464
  ensembl transcript: ENST00000525319
  gene symbol: SIRT3
  hgvsc: ENST00000525319.1:c.668T>C
  hgvsp: ENSP00000435464.1:p.Leu223Pro
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000434747
  ensembl transcript: ENST00000529937
  gene symbol: SIRT3
  hgvsc: ENST00000529937.1:c.239T>C
  hgvsp: ENSP00000434747.1:p.Leu80Pro
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142082
  ensembl transcript: ENST00000531753
  gene symbol: SIRT3
  hgvsc: ENST00000531753.1:n.547T>C
  variant of: http://identifiers.org/hgnc/14931
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1535
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32131
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13928
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10985
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Leu304Pro
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: European (Finnish)
population: South Asian
reference allele: A
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: DP

11-224156-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224156
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 224156
    reference: chr 11
allele count: 11
allele frequency: 9.091059356352997e-5
allele num: 120998
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000432937
  ensembl transcript: ENST00000524564
  gene symbol: SIRT3
  hgvsc: ENST00000524564.1:c.699G>A
  hgvsp: ENST00000524564.1:c.699G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433077
  ensembl transcript: ENST00000532956
  gene symbol: SIRT3
  hgvsc: ENST00000532956.1:c.808-5115G>A
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000437216
  ensembl transcript: ENST00000529382
  gene symbol: SIRT3
  hgvsc: ENST00000529382.1:c.465G>A
  hgvsp: ENST00000529382.1:c.465G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000435464
  ensembl transcript: ENST00000525319
  gene symbol: SIRT3
  hgvsc: ENST00000525319.1:c.648G>A
  hgvsp: ENST00000525319.1:c.648G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000372191
  ensembl transcript: ENST00000382743
  gene symbol: SIRT3
  hgvsc: ENST00000382743.4:c.891G>A
  hgvsp: ENST00000382743.4:c.891G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433899
  ensembl transcript: ENST00000532837
  gene symbol: SIRT3
  hgvsc: ENST00000532837.1:c.*604G>A
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000434747
  ensembl transcript: ENST00000529937
  gene symbol: SIRT3
  hgvsc: ENST00000529937.1:c.219G>A
  hgvsp: ENST00000529937.1:c.219G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142082
  ensembl transcript: ENST00000531753
  gene symbol: SIRT3
  hgvsc: ENST00000531753.1:n.527G>A
  variant of: http://identifiers.org/hgnc/14931
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10971
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32084
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1529
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 13884
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1450
  bin: 9.75e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Pro297Pro
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: MQ

11-224157-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224157
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 224157
    reference: chr 11
allele count: 4
allele frequency: 3.306003702724147e-5
allele num: 120992
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142082
  ensembl transcript: ENST00000531753
  gene symbol: SIRT3
  hgvsc: ENST00000531753.1:n.526C>T
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433077
  ensembl transcript: ENST00000532956
  gene symbol: SIRT3
  hgvsc: ENST00000532956.1:c.808-5116C>T
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000372191
  ensembl transcript: ENST00000382743
  gene symbol: SIRT3
  hgvsc: ENST00000382743.4:c.890C>T
  hgvsp: ENSP00000372191.4:p.Pro297Leu
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000432937
  ensembl transcript: ENST00000524564
  gene symbol: SIRT3
  hgvsc: ENST00000524564.1:c.698C>T
  hgvsp: ENSP00000432937.1:p.Pro233Leu
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000435464
  ensembl transcript: ENST00000525319
  gene symbol: SIRT3
  hgvsc: ENST00000525319.1:c.647C>T
  hgvsp: ENSP00000435464.1:p.Pro216Leu
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000434747
  ensembl transcript: ENST00000529937
  gene symbol: SIRT3
  hgvsc: ENST00000529937.1:c.218C>T
  hgvsp: ENSP00000434747.1:p.Pro73Leu
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433899
  ensembl transcript: ENST00000532837
  gene symbol: SIRT3
  hgvsc: ENST00000532837.1:c.*603C>T
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000437216
  ensembl transcript: ENST00000529382
  gene symbol: SIRT3
  hgvsc: ENST00000529382.1:c.464C>T
  hgvsp: ENSP00000437216.1:p.Pro155Leu
  variant of: http://identifiers.org/hgnc/14931
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13888
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1535
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10973
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32083
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 9729
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Pro297Leu
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

11-224178-T-TCGGGCTTCACAACGC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224178
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 224193
    reference: chr 11
allele count: 1
allele frequency: 8.272667107875579e-6
allele num: 120880
alternate allele: TCGGGCTTCACAACGC
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000435464
  ensembl transcript: ENST00000525319
  gene symbol: SIRT3
  hgvsp: ENSP00000435464.1:p.Gly204_Pro208dup
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142082
  ensembl transcript: ENST00000531753
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433077
  ensembl transcript: ENST00000532956
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433899
  ensembl transcript: ENST00000532837
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000432937
  ensembl transcript: ENST00000524564
  gene symbol: SIRT3
  hgvsp: ENSP00000432937.1:p.Gly221_Pro225dup
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: true
  consequence: inframe_insertion
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000372191
  ensembl transcript: ENST00000382743
  gene symbol: SIRT3
  hgvsp: ENSP00000372191.4:p.Gly285_Pro289dup
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000435505
  ensembl transcript: ENST00000526854
  gene symbol: SIRT3
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000437216
  ensembl transcript: ENST00000529382
  gene symbol: SIRT3
  hgvsp: ENSP00000437216.1:p.Gly143_Pro147dup
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: inframe_insertion
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000434747
  ensembl transcript: ENST00000529937
  gene symbol: SIRT3
  hgvsp: ENSP00000434747.1:p.Gly61_Pro65dup
  variant of: http://identifiers.org/hgnc/14931
canonical: true
consequence: inframe insertion
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13816
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 248
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1524
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32043
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10930
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1428
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 424
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42247
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1021
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Gly285_Pro289dup
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: MQ

11-224179-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224179
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 224179
    reference: chr 11
allele count: 7
allele frequency: 5.791633571617686e-5
allele num: 120864
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000435464
  ensembl transcript: ENST00000525319
  gene symbol: SIRT3
  hgvsc: ENST00000525319.1:c.625G>A
  hgvsp: ENSP00000435464.1:p.Asp209Asn
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433077
  ensembl transcript: ENST00000532956
  gene symbol: SIRT3
  hgvsc: ENST00000532956.1:c.808-5138G>A
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433899
  ensembl transcript: ENST00000532837
  gene symbol: SIRT3
  hgvsc: ENST00000532837.1:c.*581G>A
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000435505
  ensembl transcript: ENST00000526854
  gene symbol: SIRT3
  hgvsc: ENST00000526854.1:c.*483G>A
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000434747
  ensembl transcript: ENST00000529937
  gene symbol: SIRT3
  hgvsc: ENST00000529937.1:c.196G>A
  hgvsp: ENSP00000434747.1:p.Asp66Asn
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142082
  ensembl transcript: ENST00000531753
  gene symbol: SIRT3
  hgvsc: ENST00000531753.1:n.504G>A
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000437216
  ensembl transcript: ENST00000529382
  gene symbol: SIRT3
  hgvsc: ENST00000529382.1:c.442G>A
  hgvsp: ENSP00000437216.1:p.Asp148Asn
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000432937
  ensembl transcript: ENST00000524564
  gene symbol: SIRT3
  hgvsc: ENST00000524564.1:c.676G>A
  hgvsp: ENSP00000432937.1:p.Asp226Asn
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000372191
  ensembl transcript: ENST00000382743
  gene symbol: SIRT3
  hgvsc: ENST00000382743.4:c.868G>A
  hgvsp: ENSP00000372191.4:p.Asp290Asn
  variant of: http://identifiers.org/hgnc/14931
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10922
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32046
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1523
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13808
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Asp290Asn
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
population: African
population: Latino
reference allele: C
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum

11-224180-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224180
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 224180
    reference: chr 11
allele count: 4
allele frequency: 3.310326563715511e-5
allele num: 120834
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000435464
  ensembl transcript: ENST00000525319
  gene symbol: SIRT3
  hgvsc: ENST00000525319.1:c.624C>T
  hgvsp: ENST00000525319.1:c.624C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000437216
  ensembl transcript: ENST00000529382
  gene symbol: SIRT3
  hgvsc: ENST00000529382.1:c.441C>T
  hgvsp: ENST00000529382.1:c.441C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433899
  ensembl transcript: ENST00000532837
  gene symbol: SIRT3
  hgvsc: ENST00000532837.1:c.*580C>T
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000435505
  ensembl transcript: ENST00000526854
  gene symbol: SIRT3
  hgvsc: ENST00000526854.1:c.*482C>T
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000432937
  ensembl transcript: ENST00000524564
  gene symbol: SIRT3
  hgvsc: ENST00000524564.1:c.675C>T
  hgvsp: ENST00000524564.1:c.675C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000372191
  ensembl transcript: ENST00000382743
  gene symbol: SIRT3
  hgvsc: ENST00000382743.4:c.867C>T
  hgvsp: ENST00000382743.4:c.867C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000434747
  ensembl transcript: ENST00000529937
  gene symbol: SIRT3
  hgvsc: ENST00000529937.1:c.195C>T
  hgvsp: ENST00000529937.1:c.195C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433077
  ensembl transcript: ENST00000532956
  gene symbol: SIRT3
  hgvsc: ENST00000532956.1:c.808-5139C>T
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142082
  ensembl transcript: ENST00000531753
  gene symbol: SIRT3
  hgvsc: ENST00000531753.1:n.503C>T
  variant of: http://identifiers.org/hgnc/14931
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32055
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10909
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1527
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13797
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 449
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Pro289Pro
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD

11-224181-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 224181
    reference: chr 11
  end: Position
    type: ExactPosition
    position: 224181
    reference: chr 11
allele count: 4
allele frequency: 3.310490945807263e-5
allele num: 120828
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000435505
  ensembl transcript: ENST00000526854
  gene symbol: SIRT3
  hgvsc: ENST00000526854.1:c.*481C>A
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000372191
  ensembl transcript: ENST00000382743
  gene symbol: SIRT3
  hgvsc: ENST00000382743.4:c.866C>A
  hgvsp: ENSP00000372191.4:p.Pro289His
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433077
  ensembl transcript: ENST00000532956
  gene symbol: SIRT3
  hgvsc: ENST00000532956.1:c.808-5140C>A
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000437216
  ensembl transcript: ENST00000529382
  gene symbol: SIRT3
  hgvsc: ENST00000529382.1:c.440C>A
  hgvsp: ENSP00000437216.1:p.Pro147His
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000435464
  ensembl transcript: ENST00000525319
  gene symbol: SIRT3
  hgvsc: ENST00000525319.1:c.623C>A
  hgvsp: ENSP00000435464.1:p.Pro208His
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000433899
  ensembl transcript: ENST00000532837
  gene symbol: SIRT3
  hgvsc: ENST00000532837.1:c.*579C>A
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000434747
  ensembl transcript: ENST00000529937
  gene symbol: SIRT3
  hgvsc: ENST00000529937.1:c.194C>A
  hgvsp: ENSP00000434747.1:p.Pro65His
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000142082
  ensembl protein: ENSP00000432937
  ensembl transcript: ENST00000524564
  gene symbol: SIRT3
  hgvsc: ENST00000524564.1:c.674C>A
  hgvsp: ENSP00000432937.1:p.Pro225His
  variant of: http://identifiers.org/hgnc/14931
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000142082
  ensembl transcript: ENST00000531753
  gene symbol: SIRT3
  hgvsc: ENST00000531753.1:n.502C>A
  variant of: http://identifiers.org/hgnc/14931
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1524
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13796
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32064
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10900
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Pro289His
num of homozygotes: 0
reference allele: G

GenotypeQuality
all individuals: 480
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 489
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1021
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 3449
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1456
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6298
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 376
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 369
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 256
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 1.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6426
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6318
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59382
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9116
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.514458134272064e-4
allele num: 7954
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 794
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15030
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.955e0

MQ
type: SiteQuality
SIO_000300: 5.667e1

MQRankSum
type: SiteQuality
SIO_000300: 7.49e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 1.325617e6

ClippingRankSum
type: SiteQuality
SIO_000300: -7.22e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.19e-1

VQSLOD
type: SiteQuality
SIO_000300: -7.043e-1

QD
type: SiteQuality
SIO_000300: 1.928e1

GenotypeQuality
all individuals: 34328
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3416
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 370
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 480
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 574
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 484
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1024
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 6321
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1165
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 2
allele frequency: 2.515723270440251e-4
allele num: 7950
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6324
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 792
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9088
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59370
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15040
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6442
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.41e0

FS
type: SiteQuality
SIO_000300: 1.42e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

QD
type: SiteQuality
SIO_000300: 4.8e-1

MQ
type: SiteQuality
SIO_000300: 5.703e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.04e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.363e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.06e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.23e0

DP
type: SiteQuality
SIO_000300: 1.327336e6

GenotypeQuality
all individuals: 882
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 484
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 686
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 462
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 315
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2042
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2053
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 209
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1321
bin: 7.5e0
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59508
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6420
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7902
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.585012511523772e-5
allele num: 15186
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9124
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6344
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 794
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

MQ
type: SiteQuality
SIO_000300: 5.738e1

VQSLOD
type: SiteQuality
SIO_000300: 4.99e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.320963e6

QD
type: SiteQuality
SIO_000300: 1.196e1

GenotypeQuality
all individuals: 813
bin: 2.75e1
variant carriers: 8

GenotypeQuality
all individuals: 975
bin: 8.25e1
variant carriers: 13

GenotypeQuality
all individuals: 384
bin: 5.25e1
variant carriers: 9

GenotypeQuality
all individuals: 5792
bin: 6.75e1
variant carriers: 12

GenotypeQuality
all individuals: 2635
bin: 2.5e0
variant carriers: 3

GenotypeQuality
all individuals: 379
bin: 9.25e1
variant carriers: 9

GenotypeQuality
all individuals: 189
bin: 1.25e1
variant carriers: 6

GenotypeQuality
all individuals: 391
bin: 8.75e1
variant carriers: 11

GenotypeQuality
all individuals: 387
bin: 4.25e1
variant carriers: 4

GenotypeQuality
all individuals: 513
bin: 4.75e1
variant carriers: 7

East Asian
type: Population
allele count: 444
allele frequency: 1.207177814029364e-1
allele num: 3678
num of homozygotes: 103

Other
type: Population
allele count: 10
allele frequency: 1.302083333333333e-2
allele num: 768
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 3.19693094629156e-4
allele num: 6256
num of homozygotes: 0

Latino
type: Population
allele count: 210
allele frequency: 2.777777777777778e-2
allele num: 7560
num of homozygotes: 22

African
type: Population
allele count: 21
allele frequency: 2.711776859504132e-3
allele num: 7744
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 221
allele frequency: 3.795685627919758e-3
allele num: 58224
num of homozygotes: 7

South Asian
type: Population
allele count: 79
allele frequency: 5.470914127423823e-3
allele num: 14440
num of homozygotes: 2

QD
type: SiteQuality
SIO_000300: 2.06e1

FS
type: SiteQuality
SIO_000300: 5.5e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.42e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.94e0

MQRankSum
type: SiteQuality
SIO_000300: 8.100000000000001e-1

MQ
type: SiteQuality
SIO_000300: 5.566e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.72e-1

DP
type: SiteQuality
SIO_000300: 1.326738e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.36e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.356e0

GenotypeQuality
all individuals: 2038
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1368
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6196
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 506
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1995
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 147
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1154
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1256
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 458
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 799
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.681067814275628e-5
allele num: 59486
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7888
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6380
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15190
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9118
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6340
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 796
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.28e0

MQRankSum
type: SiteQuality
SIO_000300: 2.04e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.64e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.117e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

FS
type: SiteQuality
SIO_000300: 1.2186e1

QD
type: SiteQuality
SIO_000300: 1.437e1

DP
type: SiteQuality
SIO_000300: 1.316849e6

MQ
type: SiteQuality
SIO_000300: 5.642e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.81e0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 792
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7816
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6326
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 6.5e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.922e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.41e-2

FS
type: SiteQuality
SIO_000300: 8.647e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.92e-1

MQ
type: SiteQuality
SIO_000300: 5.101e1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.5e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.85e-1

DP
type: SiteQuality
SIO_000300: 1.31354e6

GenotypeQuality
all individuals: 761
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1277
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 498
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 469
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1903
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1067
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1096
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 1139
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1960
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9074
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6328
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.68503353216729e-5
allele num: 59346
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.614631565021828e-5
allele num: 15118
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7816
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 792
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 4.74233322794815e-4
allele num: 6326
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.5e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.92e-1

MQ
type: SiteQuality
SIO_000300: 5.101e1

FS
type: SiteQuality
SIO_000300: 8.647e0

QD
type: SiteQuality
SIO_000300: 6.5e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.85e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.41e-2

DP
type: SiteQuality
SIO_000300: 1.31354e6

VQSLOD
type: SiteQuality
SIO_000300: -1.922e0

GenotypeQuality
all individuals: 1277
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 267
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 358
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4001
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29512
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1466
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 469
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1139
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1171
bin: 2.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6326
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6328
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.614631565021828e-5
allele num: 15118
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9074
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7816
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59346
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 792
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 8.647e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.92e-1

QD
type: SiteQuality
SIO_000300: 6.5e-1

MQ
type: SiteQuality
SIO_000300: 5.101e1

DP
type: SiteQuality
SIO_000300: 1.31354e6

VQSLOD
type: SiteQuality
SIO_000300: -1.922e0

MQRankSum
type: SiteQuality
SIO_000300: 1.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.41e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 9.5e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.85e-1

GenotypeQuality
all individuals: 1649
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 802
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1136
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1093
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 1275
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1296
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 468
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5619
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1213
bin: 5.25e1
variant carriers: 1

Latino
type: Population
allele count: 1
allele frequency: 1.107665042091272e-4
allele num: 9028
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.989917750066331e-4
allele num: 15076
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.595405232929164e-4
allele num: 6268
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7782
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.2531328320802e-3
allele num: 798
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6324
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.373022565520963e-5
allele num: 59294
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.53e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.75e0

FS
type: SiteQuality
SIO_000300: 1.4849e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.47e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.57e-1

MQ
type: SiteQuality
SIO_000300: 5.001e1

DP
type: SiteQuality
SIO_000300: 1.313423e6

VQSLOD
type: SiteQuality
SIO_000300: -3.382e0

QD
type: SiteQuality
SIO_000300: 1.65e0

GenotypeQuality
all individuals: 528
bin: 8.25e1
variant carriers: 37

GenotypeQuality
all individuals: 956
bin: 7.75e1
variant carriers: 33

GenotypeQuality
all individuals: 208
bin: 9.25e1
variant carriers: 24

GenotypeQuality
all individuals: 784
bin: 2.75e1
variant carriers: 16

GenotypeQuality
all individuals: 552
bin: 3.75e1
variant carriers: 15

GenotypeQuality
all individuals: 214
bin: 5.25e1
variant carriers: 23

GenotypeQuality
all individuals: 20378
bin: 6.25e1
variant carriers: 39

GenotypeQuality
all individuals: 202
bin: 5.75e1
variant carriers: 21

GenotypeQuality
all individuals: 250
bin: 8.75e1
variant carriers: 45

GenotypeQuality
all individuals: 1085
bin: 7.25e1
variant carriers: 36

Latino
type: Population
allele count: 402
allele frequency: 6.409438775510204e-2
allele num: 6272
num of homozygotes: 22

South Asian
type: Population
allele count: 859
allele frequency: 7.130997841607173e-2
allele num: 12046
num of homozygotes: 6

East Asian
type: Population
allele count: 562
allele frequency: 1.821127673363578e-1
allele num: 3086
num of homozygotes: 103

European (Non-Finnish)
type: Population
allele count: 3086
allele frequency: 7.428626450339415e-2
allele num: 41542
num of homozygotes: 33

African
type: Population
allele count: 94
allele frequency: 1.320966835300731e-2
allele num: 7116
num of homozygotes: 0

Other
type: Population
allele count: 38
allele frequency: 7.063197026022305e-2
allele num: 538
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 355
allele frequency: 8.134738771769019e-2
allele num: 4364
num of homozygotes: 13

BaseQRankSum
type: SiteQuality
SIO_000300: -5.32e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.27e-1

MQ
type: SiteQuality
SIO_000300: 5.375e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.38e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.92e0

DP
type: SiteQuality
SIO_000300: 1.515349e6

VQSLOD
type: SiteQuality
SIO_000300: -1.187e0

QD
type: SiteQuality
SIO_000300: 1.049e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.450000000000001e-2

FS
type: SiteQuality
SIO_000300: 3.048e1

GenotypeQuality
all individuals: 278
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 187
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 784
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 250
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 956
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1085
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 552
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 868
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20378
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5206
bin: 9.75e1
variant carriers: 3

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 7.221607048288479e-5
allele num: 41542
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7116
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3086
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 538
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4364
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6272
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12046
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.049e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.450000000000001e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.92e0

FS
type: SiteQuality
SIO_000300: 3.048e1

DP
type: SiteQuality
SIO_000300: 1.515349e6

ClippingRankSum
type: SiteQuality
SIO_000300: 6.27e-1

MQ
type: SiteQuality
SIO_000300: 5.375e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.32e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.187e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.38e-1

GenotypeQuality
all individuals: 278
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 239
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 956
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3519
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 202
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 208
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1085
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3365
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 528
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 41542
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4364
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7116
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 538
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12046
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3086
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 6.377551020408163e-4
allele num: 6272
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.515349e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.450000000000001e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 6.27e-1

QD
type: SiteQuality
SIO_000300: 1.049e1

MQRankSum
type: SiteQuality
SIO_000300: 2.92e0

FS
type: SiteQuality
SIO_000300: 3.048e1

MQ
type: SiteQuality
SIO_000300: 5.375e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.38e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.32e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.187e0

GenotypeQuality
all individuals: 1869
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 159
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6047
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 214
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 519
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2241
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1144
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 466
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1901
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1105
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6264
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.693939085950469e-5
allele num: 59034
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 790
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14986
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8892
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7688
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6046
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.350342e6

ClippingRankSum
type: SiteQuality
SIO_000300: -9.69e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.642e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.3e-3

FS
type: SiteQuality
SIO_000300: 3.699e0

MQRankSum
type: SiteQuality
SIO_000300: -2.9e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.19e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.93e-1

QD
type: SiteQuality
SIO_000300: 1.734e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 7999
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 839
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 3973
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2373
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 776
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 453
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2194
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 368
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 720
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 815
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4952
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4760
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.426940639269406e-4
allele num: 7008
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 50894
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 638
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6066
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13394
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.41e0

QD
type: SiteQuality
SIO_000300: 1.026e1

FS
type: SiteQuality
SIO_000300: 6.105e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.735e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.3e0

MQ
type: SiteQuality
SIO_000300: 5.295e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.55e-2

DP
type: SiteQuality
SIO_000300: 1.204079e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.19e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.803e0

GenotypeQuality
all individuals: 698
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2171
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3932
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 376
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1273
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 369
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19134
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 778
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 375
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2384
bin: 3.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13396
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 642
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4790
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6980
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4956
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.652346331791143e-4
allele num: 6052
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 50888
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -3.712e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.153e0

QD
type: SiteQuality
SIO_000300: 4.4e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.33e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.11e-1

FS
type: SiteQuality
SIO_000300: 1.0766e1

MQ
type: SiteQuality
SIO_000300: 4.768e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.66e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.15e0

DP
type: SiteQuality
SIO_000300: 1.200581e6

GenotypeQuality
all individuals: 408
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 810
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 369
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1791
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1000
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 1273
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2171
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 375
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 438
bin: 1.75e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 2.087682672233821e-4
allele num: 4790
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6052
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 2.239474469991042e-4
allele num: 13396
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4956
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.557632398753894e-3
allele num: 642
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.432664756446991e-4
allele num: 6980
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.965099827071215e-5
allele num: 50888
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.66e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.153e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.11e-1

MQ
type: SiteQuality
SIO_000300: 4.768e1

FS
type: SiteQuality
SIO_000300: 1.0766e1

VQSLOD
type: SiteQuality
SIO_000300: -3.712e0

MQRankSum
type: SiteQuality
SIO_000300: 2.15e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.33e-1

DP
type: SiteQuality
SIO_000300: 1.200581e6

QD
type: SiteQuality
SIO_000300: 4.4e-1

GenotypeQuality
all individuals: 2282
bin: 3.25e1
variant carriers: 7

GenotypeQuality
all individuals: 3599
bin: 6.75e1
variant carriers: 5

GenotypeQuality
all individuals: 908
bin: 2.5e0
variant carriers: 4

GenotypeQuality
all individuals: 287
bin: 5.75e1
variant carriers: 11

GenotypeQuality
all individuals: 8046
bin: 7.5e0
variant carriers: 8

GenotypeQuality
all individuals: 1230
bin: 7.75e1
variant carriers: 6

GenotypeQuality
all individuals: 1262
bin: 9.75e1
variant carriers: 271

GenotypeQuality
all individuals: 1227
bin: 7.25e1
variant carriers: 9

GenotypeQuality
all individuals: 412
bin: 9.25e1
variant carriers: 8

GenotypeQuality
all individuals: 1001
bin: 4.25e1
variant carriers: 13

GenotypeQuality
all individuals: 1009
bin: 5.25e1
variant carriers: 13

European (Non-Finnish)
type: Population
allele count: 174
allele frequency: 3.812612296770236e-3
allele num: 45638
num of homozygotes: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4196
num of homozygotes: 0

Other
type: Population
allele count: 7
allele frequency: 1.162790697674419e-2
allele num: 602
num of homozygotes: 0

South Asian
type: Population
allele count: 142
allele frequency: 1.111981205951449e-2
allele num: 12770
num of homozygotes: 4

African
type: Population
allele count: 1
allele frequency: 1.992825827022718e-4
allele num: 5018
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 4
allele frequency: 9.36768149882904e-4
allele num: 4270
num of homozygotes: 0

Latino
type: Population
allele count: 14
allele frequency: 2.377717391304348e-3
allele num: 5888
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 6.56e0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.169999999999999e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.572e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.15e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.31e-2

MQRankSum
type: SiteQuality
SIO_000300: 1.92e0

FS
type: SiteQuality
SIO_000300: 3.1246e1

MQ
type: SiteQuality
SIO_000300: 5.783e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.231e0

DP
type: SiteQuality
SIO_000300: 1.110841e6

GenotypeQuality
all individuals: 1001
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5357
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3599
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1565
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 412
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 287
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 366
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1227
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2282
bin: 3.25e1
variant carriers: 0

East Asian
type: Population
allele count: 6
allele frequency: 1.429933269780744e-3
allele num: 4196
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4270
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5018
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.698369565217391e-4
allele num: 5888
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.191156492396687e-5
allele num: 45638
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.830853563038371e-5
allele num: 12770
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 602
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.31e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.572e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.15e0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.169999999999999e-1

FS
type: SiteQuality
SIO_000300: 3.1246e1

MQRankSum
type: SiteQuality
SIO_000300: 1.92e0

DP
type: SiteQuality
SIO_000300: 1.110841e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.231e0

MQ
type: SiteQuality
SIO_000300: 5.783e1

QD
type: SiteQuality
SIO_000300: 6.56e0

GenotypeQuality
all individuals: 4950
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3577
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1761
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1241
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 384
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 796
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1225
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1747
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 999
bin: 9.75e1
variant carriers: 4

Other
type: Population
allele count: 1
allele frequency: 1.694915254237288e-3
allele num: 590
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.808839606434484e-5
allele num: 12806
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5764
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4812
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 45162
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 4.859086491739553e-4
allele num: 4116
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4214
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 8.314400000000001e1

VQSLOD
type: SiteQuality
SIO_000300: -9.097e0

DP
type: SiteQuality
SIO_000300: 1.048088e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 3.57e0

MQ
type: SiteQuality
SIO_000300: 5.188e1

MQRankSum
type: SiteQuality
SIO_000300: 3.51e0

QD
type: SiteQuality
SIO_000300: 1.2e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.17e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.102e0

GenotypeQuality
all individuals: 14522
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1734
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1877
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1740
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 420
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 599
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 791
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 362
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1218
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5640
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 568
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 2.266545784224841e-4
allele num: 4412
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4152
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 44342
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12660
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3976
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

DP
type: SiteQuality
SIO_000300: 1.015943e6

MQRankSum
type: SiteQuality
SIO_000300: 1.69e0

QD
type: SiteQuality
SIO_000300: 6.6e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.79e-1

MQ
type: SiteQuality
SIO_000300: 5.673e1

FS
type: SiteQuality
SIO_000300: 2.233e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.06e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.668e0

VQSLOD
type: SiteQuality
SIO_000300: -1.24e0

GenotypeQuality
all individuals: 1193
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2214
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3474
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 420
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 788
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1141
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14510
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1216
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 627
bin: 5.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 570
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4128
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5598
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 44150
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4362
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 2.532928064842959e-4
allele num: 3948
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12590
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.8e0

MQ
type: SiteQuality
SIO_000300: 5.547e1

VQSLOD
type: SiteQuality
SIO_000300: -2.397e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.73e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.556e0

FS
type: SiteQuality
SIO_000300: 4.013e0

MQRankSum
type: SiteQuality
SIO_000300: 3.45e0

DP
type: SiteQuality
SIO_000300: 1.011059e6

QD
type: SiteQuality
SIO_000300: 8.0e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.8e-3

GenotypeQuality
all individuals: 1197
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 892
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 683
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2395
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3376
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 794
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3466
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 422
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1003
bin: 9.75e1
variant carriers: 3

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 6.810133478616181e-5
allele num: 44052
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4106
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3948
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4322
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12566
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5586
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 564
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -3.787e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.77e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 4.8e-1

DP
type: SiteQuality
SIO_000300: 1.010683e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.73e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.875e0

MQRankSum
type: SiteQuality
SIO_000300: 2.01e0

FS
type: SiteQuality
SIO_000300: 3.5604e1

QD
type: SiteQuality
SIO_000300: 9.399999999999999e-1

MQ
type: SiteQuality
SIO_000300: 5.018e1

GenotypeQuality
all individuals: 2395
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 892
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 552
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4295
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1526
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1003
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1229
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 794
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3466
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12566
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 2.532928064842959e-4
allele num: 3948
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4322
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5586
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 564
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4106
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 44052
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -3.787e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.77e-2

DP
type: SiteQuality
SIO_000300: 1.010683e6

FS
type: SiteQuality
SIO_000300: 3.5604e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.875e0

MQ
type: SiteQuality
SIO_000300: 5.018e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.8e-1

QD
type: SiteQuality
SIO_000300: 9.399999999999999e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.01e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.73e0

GenotypeQuality
all individuals: 3508
bin: 2.25e1
variant carriers: 374

GenotypeQuality
all individuals: 933
bin: 3.75e1
variant carriers: 183

GenotypeQuality
all individuals: 240
bin: 8.75e1
variant carriers: 77

GenotypeQuality
all individuals: 962
bin: 1.75e1
variant carriers: 272

GenotypeQuality
all individuals: 2570
bin: 7.5e0
variant carriers: 123

GenotypeQuality
all individuals: 11267
bin: 6.25e1
variant carriers: 87

GenotypeQuality
all individuals: 392
bin: 8.25e1
variant carriers: 74

GenotypeQuality
all individuals: 1227
bin: 3.25e1
variant carriers: 284

GenotypeQuality
all individuals: 651
bin: 7.75e1
variant carriers: 78

GenotypeQuality
all individuals: 1204
bin: 2.75e1
variant carriers: 213

European (Non-Finnish)
type: Population
allele count: 2626
allele frequency: 9.746140142517815e-2
allele num: 26944
num of homozygotes: 357

Latino
type: Population
allele count: 331
allele frequency: 8.733509234828496e-2
allele num: 3790
num of homozygotes: 51

South Asian
type: Population
allele count: 245
allele frequency: 2.545190110118429e-2
allele num: 9626
num of homozygotes: 11

European (Finnish)
type: Population
allele count: 273
allele frequency: 1.159728122344945e-1
allele num: 2354
num of homozygotes: 64

African
type: Population
allele count: 77
allele frequency: 1.997924234561494e-2
allele num: 3854
num of homozygotes: 5

East Asian
type: Population
allele count: 20
allele frequency: 5.844535359438924e-3
allele num: 3422
num of homozygotes: 0

Other
type: Population
allele count: 23
allele frequency: 6.424581005586592e-2
allele num: 358
num of homozygotes: 3

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.478e0

DP
type: SiteQuality
SIO_000300: 1.039475e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.23e-2

MQ
type: SiteQuality
SIO_000300: 5.435e1

FS
type: SiteQuality
SIO_000300: 2.4592e1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.58e-1

VQSLOD
type: SiteQuality
SIO_000300: -6.298e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.12e0

MQRankSum
type: SiteQuality
SIO_000300: 2.43e0

QD
type: SiteQuality
SIO_000300: 1.154e1

GenotypeQuality
all individuals: 16142
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1908
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1591
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1213
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 795
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 216
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 579
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 666
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 524
bin: 9.75e1
variant carriers: 12

GenotypeQuality
all individuals: 311
bin: 8.75e1
variant carriers: 1

East Asian
type: Population
allele count: 2
allele frequency: 5.159958720330237e-4
allele num: 3876
num of homozygotes: 1

European (Non-Finnish)
type: Population
allele count: 10
allele frequency: 2.36854571293226e-4
allele num: 42220
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3792
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.874765654293213e-4
allele num: 5334
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4216
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 534
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.157937673356176e-5
allele num: 12258
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.8e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.192e1

MQRankSum
type: SiteQuality
SIO_000300: 3.35e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.8e-1

DP
type: SiteQuality
SIO_000300: 9.12278e5

MQ
type: SiteQuality
SIO_000300: 4.794e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.56e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.4e-2

VQSLOD
type: SiteQuality
SIO_000300: -6.546999999999999e-1

GenotypeQuality
all individuals: 1926
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 225
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1804
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 614
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 730
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3921
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 571
bin: 4.25e1
variant carriers: 2

GenotypeQuality
all individuals: 1262
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 547
bin: 9.75e1
variant carriers: 15

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12354
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 5.194805194805195e-4
allele num: 3850
num of homozygotes: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 544
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 15
allele frequency: 3.51304510749918e-4
allele num: 42698
num of homozygotes: 3

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4272
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.858045336306206e-4
allele num: 5382
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3918
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.017e0

MQRankSum
type: SiteQuality
SIO_000300: -1.134e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.47e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.41e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.9e0

QD
type: SiteQuality
SIO_000300: 4.99e0

FS
type: SiteQuality
SIO_000300: 2.2372e1

DP
type: SiteQuality
SIO_000300: 9.0902e5

MQ
type: SiteQuality
SIO_000300: 5.182e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.48e-2

GenotypeQuality
all individuals: 594
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1340
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3779
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 17046
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1759
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 666
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 6857
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 214
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 535
bin: 9.75e1
variant carriers: 9

GenotypeQuality
all individuals: 1227
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5356
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 4.719207173194903e-4
allele num: 4238
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3878
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 9.477774618519572e-5
allele num: 42204
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12264
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3770
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 530
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.6833e1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.9e-2

MQ
type: SiteQuality
SIO_000300: 5.065e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.47e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.601e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.8e0

DP
type: SiteQuality
SIO_000300: 9.0643e5

MQRankSum
type: SiteQuality
SIO_000300: -7.31e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.896e0

QD
type: SiteQuality
SIO_000300: 6.23e0

GenotypeQuality
all individuals: 1759
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 666
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 311
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1191
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 495
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1227
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 535
bin: 9.75e1
variant carriers: 10

GenotypeQuality
all individuals: 1340
bin: 3.75e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12264
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 5.601194921583271e-4
allele num: 5356
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3770
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 530
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3878
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 11
allele frequency: 2.606388020092882e-4
allele num: 42204
num of homozygotes: 2

African
type: Population
allele count: 1
allele frequency: 2.359603586597452e-4
allele num: 4238
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.8e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.47e-2

FS
type: SiteQuality
SIO_000300: 2.6833e1

MQRankSum
type: SiteQuality
SIO_000300: -7.31e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.9e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.601e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.896e0

QD
type: SiteQuality
SIO_000300: 6.23e0

DP
type: SiteQuality
SIO_000300: 9.0643e5

MQ
type: SiteQuality
SIO_000300: 5.065e1

GenotypeQuality
all individuals: 6920
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1702
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3749
bin: 7.5e0
variant carriers: 2

GenotypeQuality
all individuals: 1777
bin: 2.75e1
variant carriers: 2

GenotypeQuality
all individuals: 584
bin: 1.75e1
variant carriers: 2

GenotypeQuality
all individuals: 3820
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 660
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 231
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 303
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 213
bin: 9.25e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4206
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3868
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12228
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.878992859827133e-4
allele num: 5322
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 520
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3770
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.901502186727515e-4
allele num: 42072
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.978e0

MQ
type: SiteQuality
SIO_000300: 5.352e1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.24e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.33e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.086e0

QD
type: SiteQuality
SIO_000300: 3.59e0

FS
type: SiteQuality
SIO_000300: 1.5973e1

DP
type: SiteQuality
SIO_000300: 9.00785e5

BaseQRankSum
type: SiteQuality
SIO_000300: -9.04e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.739e0

GenotypeQuality
all individuals: 670
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3820
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1182
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1201
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1364
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 558
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 570
bin: 9.75e1
variant carriers: 11

GenotypeQuality
all individuals: 213
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3770
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 2.377555872563005e-4
allele num: 4206
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.177952240758914e-5
allele num: 12228
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 1.188438866704697e-4
allele num: 42072
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.878992859827133e-4
allele num: 5322
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 520
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3868
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.5973e1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.04e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.24e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.086e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.978e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.33e-1

QD
type: SiteQuality
SIO_000300: 3.59e0

MQRankSum
type: SiteQuality
SIO_000300: -1.739e0

MQ
type: SiteQuality
SIO_000300: 5.352e1

DP
type: SiteQuality
SIO_000300: 9.00785e5

GenotypeQuality
all individuals: 580
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1886
bin: 3.25e1
variant carriers: 2

GenotypeQuality
all individuals: 3820
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 419
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 213
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1201
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 570
bin: 9.75e1
variant carriers: 21

GenotypeQuality
all individuals: 303
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 21
allele frequency: 4.991443240159727e-4
allele num: 42072
num of homozygotes: 4

Other
type: Population
allele count: 1
allele frequency: 1.923076923076923e-3
allele num: 520
num of homozygotes: 0

African
type: Population
allele count: 5
allele frequency: 1.188777936281503e-3
allele num: 4206
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5322
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12228
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3868
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3770
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.086e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.24e-1

FS
type: SiteQuality
SIO_000300: 1.5973e1

MQRankSum
type: SiteQuality
SIO_000300: -1.739e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.33e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.04e-1

QD
type: SiteQuality
SIO_000300: 3.59e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.978e0

MQ
type: SiteQuality
SIO_000300: 5.352e1

DP
type: SiteQuality
SIO_000300: 9.00785e5

GenotypeQuality
all individuals: 231
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1777
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 570
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 1886
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3820
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 584
bin: 1.75e1
variant carriers: 2

GenotypeQuality
all individuals: 213
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 419
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 9.507510933637573e-5
allele num: 42072
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4206
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5322
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12228
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3868
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3770
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 520
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.978e0

DP
type: SiteQuality
SIO_000300: 9.00785e5

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.33e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.24e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.04e-1

MQ
type: SiteQuality
SIO_000300: 5.352e1

MQRankSum
type: SiteQuality
SIO_000300: -1.739e0

VQSLOD
type: SiteQuality
SIO_000300: -1.086e0

FS
type: SiteQuality
SIO_000300: 1.5973e1

QD
type: SiteQuality
SIO_000300: 3.59e0

GenotypeQuality
all individuals: 1702
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 558
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 213
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 584
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 660
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1201
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 419
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 303
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3868
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.753755466818787e-5
allele num: 42072
num of homozygotes: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 520
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5322
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3770
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4206
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12228
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.24e-1

MQ
type: SiteQuality
SIO_000300: 5.352e1

FS
type: SiteQuality
SIO_000300: 1.5973e1

QD
type: SiteQuality
SIO_000300: 3.59e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.33e-1

DP
type: SiteQuality
SIO_000300: 9.00785e5

BaseQRankSum
type: SiteQuality
SIO_000300: -9.04e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.978e0

MQRankSum
type: SiteQuality
SIO_000300: -1.739e0

VQSLOD
type: SiteQuality
SIO_000300: -1.086e0

GenotypeQuality
all individuals: 3749
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 231
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1702
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6920
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 660
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 213
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 3820
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1182
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12228
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 2.377555872563005e-4
allele num: 4206
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5322
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3868
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3770
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.901502186727515e-4
allele num: 42072
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 520
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.739e0

QD
type: SiteQuality
SIO_000300: 3.59e0

VQSLOD
type: SiteQuality
SIO_000300: -1.086e0

MQ
type: SiteQuality
SIO_000300: 5.352e1

FS
type: SiteQuality
SIO_000300: 1.5973e1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.24e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.33e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.04e-1

DP
type: SiteQuality
SIO_000300: 9.00785e5

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.978e0

GenotypeQuality
all individuals: 539
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 967
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6933
bin: 2.25e1
variant carriers: 6

GenotypeQuality
all individuals: 554
bin: 1.75e1
variant carriers: 4

GenotypeQuality
all individuals: 251
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 185
bin: 9.25e1
variant carriers: 2

GenotypeQuality
all individuals: 16811
bin: 6.25e1
variant carriers: 4

GenotypeQuality
all individuals: 620
bin: 4.75e1
variant carriers: 2

GenotypeQuality
all individuals: 3566
bin: 6.75e1
variant carriers: 3

GenotypeQuality
all individuals: 1777
bin: 2.75e1
variant carriers: 2

European (Non-Finnish)
type: Population
allele count: 19
allele frequency: 4.724252822119449e-4
allele num: 40218
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 502
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 2.000800320128051e-4
allele num: 4998
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3790
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 4.901960784313725e-4
allele num: 4080
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3626
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12112
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -7.14e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.44e0

MQ
type: SiteQuality
SIO_000300: 5.56e1

VQSLOD
type: SiteQuality
SIO_000300: -1.402e0

QD
type: SiteQuality
SIO_000300: 1.358e1

DP
type: SiteQuality
SIO_000300: 8.93931e5

BaseQRankSum
type: SiteQuality
SIO_000300: -9.25e-1

FS
type: SiteQuality
SIO_000300: 2.8643e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.36e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.552e0

GenotypeQuality
all individuals: 1770
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2916
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 439
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 631
bin: 1.25e1
variant carriers: 2

GenotypeQuality
all individuals: 620
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 967
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 451
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 251
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1224
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 554
bin: 1.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3790
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 5.515719801434088e-4
allele num: 3626
num of homozygotes: 1

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 9.945795414988313e-5
allele num: 40218
num of homozygotes: 2

Latino
type: Population
allele count: 1
allele frequency: 2.000800320128051e-4
allele num: 4998
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4080
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12112
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 502
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.402e0

MQ
type: SiteQuality
SIO_000300: 5.56e1

QD
type: SiteQuality
SIO_000300: 1.358e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.552e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.44e0

FS
type: SiteQuality
SIO_000300: 2.8643e1

DP
type: SiteQuality
SIO_000300: 8.93931e5

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.36e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -9.25e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.14e-1

GenotypeQuality
all individuals: 1224
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1073
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 554
bin: 1.75e1
variant carriers: 2

GenotypeQuality
all individuals: 608
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2916
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 620
bin: 4.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1770
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 539
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 297
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 185
bin: 9.25e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3626
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 2.000800320128051e-4
allele num: 4998
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12112
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3790
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.989159082997663e-4
allele num: 40218
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 2.450980392156863e-4
allele num: 4080
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 502
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.402e0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.25e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.14e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.552e0

QD
type: SiteQuality
SIO_000300: 1.358e1

MQ
type: SiteQuality
SIO_000300: 5.56e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.44e0

FS
type: SiteQuality
SIO_000300: 2.8643e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.36e-2

DP
type: SiteQuality
SIO_000300: 8.93931e5

GenotypeQuality
all individuals: 1843
bin: 2.75e1
variant carriers: 2

GenotypeQuality
all individuals: 7180
bin: 2.25e1
variant carriers: 5

GenotypeQuality
all individuals: 448
bin: 9.75e1
variant carriers: 23

GenotypeQuality
all individuals: 576
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 247
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 535
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 974
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3571
bin: 6.75e1
variant carriers: 3

GenotypeQuality
all individuals: 189
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 303
bin: 5.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4086
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.994415636218588e-4
allele num: 5014
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12102
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 14
allele frequency: 3.455595596583897e-4
allele num: 40514
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3794
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3668
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.8214e1

QD
type: SiteQuality
SIO_000300: 1.407e1

MQRankSum
type: SiteQuality
SIO_000300: -8.98e-1

DP
type: SiteQuality
SIO_000300: 8.87919e5

BaseQRankSum
type: SiteQuality
SIO_000300: -7.51e-1

MQ
type: SiteQuality
SIO_000300: 5.551e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.25e0

VQSLOD
type: SiteQuality
SIO_000300: -1.533e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.86e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.733e0

GenotypeQuality
all individuals: 3792
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 7180
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 3571
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2681
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 449
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16653
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 303
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 576
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1827
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1073
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3668
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12102
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5014
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3794
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 4.894762604013706e-4
allele num: 4086
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 1.234141284494249e-4
allele num: 40514
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.551e1

FS
type: SiteQuality
SIO_000300: 2.8214e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.25e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.733e0

QD
type: SiteQuality
SIO_000300: 1.407e1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.51e-1

DP
type: SiteQuality
SIO_000300: 8.87919e5

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.86e-2

MQRankSum
type: SiteQuality
SIO_000300: -8.98e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.533e0

GenotypeQuality
all individuals: 449
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7180
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 600
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 448
bin: 9.75e1
variant carriers: 15

GenotypeQuality
all individuals: 1239
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 189
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 974
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16653
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1073
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 303
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 8
allele frequency: 1.974626055190798e-4
allele num: 40514
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3668
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5014
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 512
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 9.789525208027412e-4
allele num: 4086
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12102
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3794
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.407e1

MQ
type: SiteQuality
SIO_000300: 5.551e1

DP
type: SiteQuality
SIO_000300: 8.87919e5

MQRankSum
type: SiteQuality
SIO_000300: -8.98e-1

FS
type: SiteQuality
SIO_000300: 2.8214e1

VQSLOD
type: SiteQuality
SIO_000300: -1.533e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.733e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.51e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.86e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 1.25e0

GenotypeQuality
all individuals: 218
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1999
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 469
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 4134
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7781
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 624
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 524
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 277
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2025
bin: 3.25e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12286
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3860
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4188
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5282
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3770
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 520
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 7.115074471112798e-5
allele num: 42164
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.49e-1

QD
type: SiteQuality
SIO_000300: 5.52e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.1e-2

MQRankSum
type: SiteQuality
SIO_000300: -2.067e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.754e0

DP
type: SiteQuality
SIO_000300: 8.77835e5

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.39e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.384e0

FS
type: SiteQuality
SIO_000300: 2.1289e1

MQ
type: SiteQuality
SIO_000300: 5.127e1

GenotypeQuality
all individuals: 7781
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 277
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 218
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1159
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 337
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 584
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2025
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16280
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 624
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3739
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4188
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12286
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 520
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.743382980741865e-5
allele num: 42164
num of homozygotes: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3860
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5282
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3770
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 8.77835e5

QD
type: SiteQuality
SIO_000300: 5.52e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.39e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 3.1e-2

FS
type: SiteQuality
SIO_000300: 2.1289e1

MQRankSum
type: SiteQuality
SIO_000300: -2.067e0

VQSLOD
type: SiteQuality
SIO_000300: -1.384e0

MQ
type: SiteQuality
SIO_000300: 5.127e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.754e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.49e-1

GenotypeQuality
all individuals: 7734
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1949
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 521
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3963
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 578
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2510
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1028
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 414
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 375
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 516
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4058
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 40606
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5048
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 506
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3674
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3762
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12130
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.97e-2

QD
type: SiteQuality
SIO_000300: 3.14e0

DP
type: SiteQuality
SIO_000300: 8.74665e5

BaseQRankSum
type: SiteQuality
SIO_000300: -1.52e-1

FS
type: SiteQuality
SIO_000300: 5.637e0

MQ
type: SiteQuality
SIO_000300: 4.143e1

VQSLOD
type: SiteQuality
SIO_000300: -2.471e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.79e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.23e0

GenotypeQuality
all individuals: 2510
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 179
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 245
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1949
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 573
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 515
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 516
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 375
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 414
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1261
bin: 3.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12130
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3674
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5048
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4058
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 506
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3762
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 40606
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.97e-2

MQRankSum
type: SiteQuality
SIO_000300: -1.79e-1

QD
type: SiteQuality
SIO_000300: 3.14e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.52e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.23e0

MQ
type: SiteQuality
SIO_000300: 4.143e1

FS
type: SiteQuality
SIO_000300: 5.637e0

VQSLOD
type: SiteQuality
SIO_000300: -2.471e-1

DP
type: SiteQuality
SIO_000300: 8.74665e5

GenotypeQuality
all individuals: 521
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2510
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3963
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1261
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1028
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 946
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 179
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 515
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12130
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3762
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5048
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 2.464268112370626e-4
allele num: 4058
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 7.388070728463774e-5
allele num: 40606
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3674
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 506
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.52e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.471e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.23e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.97e-2

MQRankSum
type: SiteQuality
SIO_000300: -1.79e-1

QD
type: SiteQuality
SIO_000300: 3.14e0

FS
type: SiteQuality
SIO_000300: 5.637e0

DP
type: SiteQuality
SIO_000300: 8.74665e5

MQ
type: SiteQuality
SIO_000300: 4.143e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.0e0

GenotypeQuality
all individuals: 299
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 663
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2538
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5755
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2403
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 247
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 180
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10359
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 466
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3413
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4988
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 496
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.249463784853984e-5
allele num: 12122
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 40432
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4294
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3800
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3628
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.842e0

MQRankSum
type: SiteQuality
SIO_000300: -4.7e-1

MQ
type: SiteQuality
SIO_000300: 4.794e1

DP
type: SiteQuality
SIO_000300: 8.43656e5

ClippingRankSum
type: SiteQuality
SIO_000300: -2.77e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.58e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.08e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.27e-2

FS
type: SiteQuality
SIO_000300: 3.669e0

QD
type: SiteQuality
SIO_000300: 5.78e0

GenotypeQuality
all individuals: 3316
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 745
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1292
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1987
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 461
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 1058
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2774
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 243
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 464
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8674
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5872
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4290
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 460
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.813542688910697e-5
allele num: 10190
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 2.767017155506364e-4
allele num: 3614
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3060
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 34876
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.55e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.227e0

QD
type: SiteQuality
SIO_000300: 1.897e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.42e0

FS
type: SiteQuality
SIO_000300: 1.448e0

MQRankSum
type: SiteQuality
SIO_000300: -4.78e-1

MQ
type: SiteQuality
SIO_000300: 5.398e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.38e0

VQSLOD
type: SiteQuality
SIO_000300: -1.184e-1

DP
type: SiteQuality
SIO_000300: 7.91813e5

GenotypeQuality
all individuals: 1279
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8082
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 778
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2341
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2113
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1440
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 197
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 723
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 251
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 465
bin: 9.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3500
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6044
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9360
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3986
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 436
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2888
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 33144
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 4.802e1

VQSLOD
type: SiteQuality
SIO_000300: -1.029e0

QD
type: SiteQuality
SIO_000300: 2.386e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.76e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 7.95322e5

GenotypeQuality
all individuals: 199
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 618
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1956
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13223
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1055
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1218
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 792
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 949
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1147
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1188
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6454
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15378
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.383790226460072e-4
allele num: 8390
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11358
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9722
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63158
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 842
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.21e-1

FS
type: SiteQuality
SIO_000300: 8.835000000000001e0

QD
type: SiteQuality
SIO_000300: 1.068e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.36e-1

MQ
type: SiteQuality
SIO_000300: 5.73e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -1.703e0

DP
type: SiteQuality
SIO_000300: 1.999616e6

BaseQRankSum
type: SiteQuality
SIO_000300: 8.2e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.02e-1

GenotypeQuality
all individuals: 681
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1203
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6991
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2513
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 396
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13246
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 232
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1610
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15480
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.048760499897562e-4
allele num: 9762
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8384
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6478
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63356
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 846
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11374
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.94e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.089e0

MQ
type: SiteQuality
SIO_000300: 5.446e1

QD
type: SiteQuality
SIO_000300: 1.622e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.77e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -3.073e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.86e0

DP
type: SiteQuality
SIO_000300: 2.027473e6

FS
type: SiteQuality
SIO_000300: 7.23e0

GenotypeQuality
all individuals: 7021
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 287
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1622
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 245
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 514
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 844
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13251
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 719
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2034
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8384
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63422
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6480
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.052123948286476e-4
allele num: 9746
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11378
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15514
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.89e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.31e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.95e-1

DP
type: SiteQuality
SIO_000300: 2.029916e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.2e-2

MQ
type: SiteQuality
SIO_000300: 5.82e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

FS
type: SiteQuality
SIO_000300: 8.065e0

VQSLOD
type: SiteQuality
SIO_000300: -5.568e-1

QD
type: SiteQuality
SIO_000300: 3.079e1

GenotypeQuality
all individuals: 38
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7216
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13301
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1258
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 213
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1151
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 288
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2117
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8354
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.564553476437825e-5
allele num: 63916
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11404
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15774
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9854
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6528
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.31e-1

MQ
type: SiteQuality
SIO_000300: 5.623e1

DP
type: SiteQuality
SIO_000300: 2.052329e6

QD
type: SiteQuality
SIO_000300: 1.293e1

MQRankSum
type: SiteQuality
SIO_000300: -1.259e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.881e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.52e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.874e0

GenotypeQuality
all individuals: 96
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1260
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28070
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13329
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2120
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2603
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 876
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11408
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15786
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8398
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.56289072268067e-5
allele num: 63984
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6532
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9864
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 858
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -3.693e0

MQ
type: SiteQuality
SIO_000300: 5.824e1

MQRankSum
type: SiteQuality
SIO_000300: 1.04e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.49e-1

DP
type: SiteQuality
SIO_000300: 2.05374e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.357e0

FS
type: SiteQuality
SIO_000300: 1.035e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

QD
type: SiteQuality
SIO_000300: 1.691e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.35e0

GenotypeQuality
all individuals: 36
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 327
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15866
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4705
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 5746
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 489
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25055
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 3
allele frequency: 4.394960445355992e-4
allele num: 6826
num of homozygotes: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9284
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.899559039686429e-5
allele num: 40820
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 8.304268393954493e-5
allele num: 12042
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6974
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4016
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.65e-1

MQ
type: SiteQuality
SIO_000300: 5.746e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.69e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.184e0

FS
type: SiteQuality
SIO_000300: 4.851e0

MQRankSum
type: SiteQuality
SIO_000300: 8.0e-1

DP
type: SiteQuality
SIO_000300: 2.899559e6

VQSLOD
type: SiteQuality
SIO_000300: 7.34e-1

QD
type: SiteQuality
SIO_000300: 1.888e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.25e-2

GenotypeQuality
all individuals: 37469
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 571
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2312
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2174
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 174
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8807
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6542
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.53997782431933e-5
allele num: 64936
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10038
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11422
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 870
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15952
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -2.386e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.283e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.43e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.096e0

MQ
type: SiteQuality
SIO_000300: 5.916e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

DP
type: SiteQuality
SIO_000300: 1.880272e6

ClippingRankSum
type: SiteQuality
SIO_000300: 2.76e-1

QD
type: SiteQuality
SIO_000300: 1.414e1

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 147
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1088
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2178
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2312
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 435
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8841
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10250
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.730702665282105e-4
allele num: 11556
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16462
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66026
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.194e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.742e0

FS
type: SiteQuality
SIO_000300: 3.827e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.097e0

DP
type: SiteQuality
SIO_000300: 1.901102e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.21e0

MQRankSum
type: SiteQuality
SIO_000300: 3.6e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 5.704e1

VQSLOD
type: SiteQuality
SIO_000300: -1.273e0

GenotypeQuality
all individuals: 948
bin: 8.25e1
variant carriers: 2

GenotypeQuality
all individuals: 141
bin: 3.25e1
variant carriers: 2

GenotypeQuality
all individuals: 107
bin: 3.75e1
variant carriers: 2

GenotypeQuality
all individuals: 42
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37723
bin: 6.25e1
variant carriers: 3

GenotypeQuality
all individuals: 101
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 5.25e1
variant carriers: 2

GenotypeQuality
all individuals: 7676
bin: 9.75e1
variant carriers: 6492

GenotypeQuality
all individuals: 21
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 8680
bin: 6.75e1
variant carriers: 1

Latino
type: Population
allele count: 804
allele frequency: 6.955017301038062e-2
allele num: 11560
num of homozygotes: 28

European (Finnish)
type: Population
allele count: 144
allele frequency: 2.177858439201452e-2
allele num: 6612
num of homozygotes: 1

Other
type: Population
allele count: 51
allele frequency: 5.679287305122494e-2
allele num: 898
num of homozygotes: 3

African
type: Population
allele count: 625
allele frequency: 6.078583933086948e-2
allele num: 10282
num of homozygotes: 20

European (Non-Finnish)
type: Population
allele count: 2337
allele frequency: 3.532452613440552e-2
allele num: 66158
num of homozygotes: 49

South Asian
type: Population
allele count: 1694
allele frequency: 1.028661646830216e-1
allele num: 16468
num of homozygotes: 103

East Asian
type: Population
allele count: 1140
allele frequency: 1.322199025748086e-1
allele num: 8622
num of homozygotes: 77

VQSLOD
type: SiteQuality
SIO_000300: 8.66e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.72e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.29e-1

FS
type: SiteQuality
SIO_000300: 5.37e-1

MQ
type: SiteQuality
SIO_000300: 5.766e1

DP
type: SiteQuality
SIO_000300: 2.168262e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.674e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.98e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -4.0e-1

QD
type: SiteQuality
SIO_000300: 1.368e1

GenotypeQuality
all individuals: 59
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42054
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9751
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1466
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 387
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1050
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10294
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.510756586898719e-5
allele num: 66192
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.9e-2

DP
type: SiteQuality
SIO_000300: 1.680712e6

MQRankSum
type: SiteQuality
SIO_000300: 1.35e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.91e0

QD
type: SiteQuality
SIO_000300: 6.31e0

MQ
type: SiteQuality
SIO_000300: 5.792e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -1.016e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.9e-1

FS
type: SiteQuality
SIO_000300: 5.175e0

GenotypeQuality
all individuals: 2425
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1465
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 376
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42125
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1046
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 313
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10298
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66226
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.644536652835408e-5
allele num: 11568
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.16e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.21e0

MQ
type: SiteQuality
SIO_000300: 5.827e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.71e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.681404e6

VQSLOD
type: SiteQuality
SIO_000300: -1.668e0

FS
type: SiteQuality
SIO_000300: 5.236e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.02e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.32e-1

GenotypeQuality
all individuals: 118
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42197
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2416
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1460
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 314
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 290
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1039
bin: 8.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.018412315122246e-5
allele num: 66260
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10302
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.682634e6

QD
type: SiteQuality
SIO_000300: 1.3e1

MQRankSum
type: SiteQuality
SIO_000300: -8.89e-1

FS
type: SiteQuality
SIO_000300: 1.743e0

VQSLOD
type: SiteQuality
SIO_000300: -8.86e-2

MQ
type: SiteQuality
SIO_000300: 5.633e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.172e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.69e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -2.87e-1

GenotypeQuality
all individuals: 2369
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 313
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1455
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 42203
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 289
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9742
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1037
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.062075654704171e-5
allele num: 16496
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10314
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66332
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.738e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 1.683543e6

QD
type: SiteQuality
SIO_000300: 1.259e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.625e0

VQSLOD
type: SiteQuality
SIO_000300: -1.019e0

MQ
type: SiteQuality
SIO_000300: 5.612e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.24e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.29e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.09e0

GenotypeQuality
all individuals: 23
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42507
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 309
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1036
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1455
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10338
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.06060606060606e-5
allele num: 16500
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66430
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.737e0

QD
type: SiteQuality
SIO_000300: 2.208e1

DP
type: SiteQuality
SIO_000300: 1.685494e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.840000000000001e-1

MQ
type: SiteQuality
SIO_000300: 5.808e1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.17e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.018e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -1.78e0

GenotypeQuality
all individuals: 9766
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2413
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42543
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 231
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2358
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1034
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1455
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10348
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.504392827055001e-5
allele num: 66472
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 5.834e1

FS
type: SiteQuality
SIO_000300: 4.35e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.39e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.355e0

MQRankSum
type: SiteQuality
SIO_000300: 3.19e0

VQSLOD
type: SiteQuality
SIO_000300: -3.088e0

DP
type: SiteQuality
SIO_000300: 1.686211e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.02e0

QD
type: SiteQuality
SIO_000300: 1.253e1

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2360
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2410
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 217
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 287
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1455
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 9759
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42550
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1032
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10348
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66500
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.294e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.403e0

MQRankSum
type: SiteQuality
SIO_000300: 8.49e-1

DP
type: SiteQuality
SIO_000300: 1.68669e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.1e0

VQSLOD
type: SiteQuality
SIO_000300: -2.663e0

MQ
type: SiteQuality
SIO_000300: 5.712e1

QD
type: SiteQuality
SIO_000300: 1.082e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.62e0

GenotypeQuality
all individuals: 307
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1454
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 59
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2361
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 42587
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2413
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1026
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 215
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.66183574879227e-5
allele num: 10350
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66526
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.008e1

MQ
type: SiteQuality
SIO_000300: 5.755e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 2.5e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.77e-1

DP
type: SiteQuality
SIO_000300: 1.6867e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.01e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.464e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.468e0

FS
type: SiteQuality
SIO_000300: 2.09e0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 228
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2410
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9737
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1024
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 287
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1454
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 22
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42513
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2354
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 308
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66528
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10352
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.98e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.819e1

FS
type: SiteQuality
SIO_000300: 1.687e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.217e0

MQRankSum
type: SiteQuality
SIO_000300: -1.13e0

VQSLOD
type: SiteQuality
SIO_000300: -2.126e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.61e-1

QD
type: SiteQuality
SIO_000300: 1.017e1

DP
type: SiteQuality
SIO_000300: 1.686196e6

GenotypeQuality
all individuals: 2345
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 293
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2399
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1024
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 307
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42372
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9721
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 287
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.053423626787058e-4
allele num: 66450
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 2.222222222222222e-3
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.934610176049526e-4
allele num: 10338
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 6.5e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.8e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.8e0

FS
type: SiteQuality
SIO_000300: 5.69e-1

DP
type: SiteQuality
SIO_000300: 1.684509e6

VQSLOD
type: SiteQuality
SIO_000300: -6.915e-1

QD
type: SiteQuality
SIO_000300: 1.193e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.2e-2

MQ
type: SiteQuality
SIO_000300: 5.831e1

GenotypeQuality
all individuals: 8
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1440
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 2403
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 287
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2347
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 299
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 307
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42388
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1023
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.817741153659719e-4
allele num: 16504
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10340
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.505072092953252e-5
allele num: 66442
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.48e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.233e-1

FS
type: SiteQuality
SIO_000300: 6.718e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.53e-1

MQ
type: SiteQuality
SIO_000300: 5.86e1

DP
type: SiteQuality
SIO_000300: 1.683619e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -6.1e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.4e-2

QD
type: SiteQuality
SIO_000300: 1.264e1

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9721
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2388
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2341
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 278
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 305
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66380
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10318
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157675387821255e-4
allele num: 8638
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 9.5e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.15e0

VQSLOD
type: SiteQuality
SIO_000300: -3.589e-1

DP
type: SiteQuality
SIO_000300: 1.680156e6

FS
type: SiteQuality
SIO_000300: 4.377e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.5e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.78e0

QD
type: SiteQuality
SIO_000300: 3.04e0

MQ
type: SiteQuality
SIO_000300: 5.303e1

GenotypeQuality
all individuals: 305
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2383
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1428
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 40
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2341
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 433
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42257
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 277
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1021
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9717
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157943492357573e-4
allele num: 8636
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.817961459217065e-4
allele num: 16502
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.013500482160077e-5
allele num: 66368
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.693679720822024e-5
allele num: 10316
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 6.929999999999999e-1

DP
type: SiteQuality
SIO_000300: 1.680039e6

MQRankSum
type: SiteQuality
SIO_000300: 1.75e-1

MQ
type: SiteQuality
SIO_000300: 5.877e1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.409999999999999e-1

FS
type: SiteQuality
SIO_000300: 1.199e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.33e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 1.143e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.31e-1

GenotypeQuality
all individuals: 8
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 42251
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2385
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1014
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2339
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 275
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 301
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1418
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 9709
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10310
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6596
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.521749615651282e-5
allele num: 66346
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.059871530723549e-5
allele num: 16502
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.851e1

MQRankSum
type: SiteQuality
SIO_000300: 8.91e-1

DP
type: SiteQuality
SIO_000300: 1.679523e6

VQSLOD
type: SiteQuality
SIO_000300: -4.268e-1

FS
type: SiteQuality
SIO_000300: 1.878e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -7.6e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 3.08e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.35e-1

QD
type: SiteQuality
SIO_000300: 1.217e1