10-5828061-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5828061
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 5828061
    reference: chr 10
allele count: 1
allele frequency: 8.560031500915923e-6
allele num: 116822
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369528
  ensembl transcript: ENST00000380181
  gene symbol: GDI2
  hgvsc: ENST00000380181.3:c.254-48C>A
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369538
  ensembl transcript: ENST00000380191
  gene symbol: GDI2
  hgvsc: ENST00000380191.4:c.389-48C>A
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369475
  ensembl transcript: ENST00000380132
  gene symbol: GDI2
  hgvsc: ENST00000380132.4:c.401-48C>A
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369470
  ensembl transcript: ENST00000380127
  gene symbol: GDI2
  hgvsc: ENST00000380127.1:c.401-48C>A
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476707
  ensembl transcript: ENST00000608581
  gene symbol: GDI2
  hgvsc: ENST00000608581.1:c.323-48C>A
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000401733
  ensembl transcript: ENST00000456041
  gene symbol: GDI2
  hgvsc: ENST00000456041.1:c.359-48C>A
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000394177
  ensembl transcript: ENST00000418688
  gene symbol: GDI2
  hgvsc: ENST00000418688.1:c.281-48C>A
  variant of: http://identifiers.org/hgnc/4227
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4658
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1595
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12499
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1973
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8300
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15008
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7271
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1181
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3792
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 481
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2936
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3651
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 671
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2347
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2426
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 529
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1606
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1787
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: QD

10-5828061-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5828061
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 5828061
    reference: chr 10
allele count: 1
allele frequency: 8.560031500915923e-6
allele num: 116822
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000401733
  ensembl transcript: ENST00000456041
  gene symbol: GDI2
  hgvsc: ENST00000456041.1:c.359-48C>T
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369528
  ensembl transcript: ENST00000380181
  gene symbol: GDI2
  hgvsc: ENST00000380181.3:c.254-48C>T
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369475
  ensembl transcript: ENST00000380132
  gene symbol: GDI2
  hgvsc: ENST00000380132.4:c.401-48C>T
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369538
  ensembl transcript: ENST00000380191
  gene symbol: GDI2
  hgvsc: ENST00000380191.4:c.389-48C>T
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000394177
  ensembl transcript: ENST00000418688
  gene symbol: GDI2
  hgvsc: ENST00000418688.1:c.281-48C>T
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476707
  ensembl transcript: ENST00000608581
  gene symbol: GDI2
  hgvsc: ENST00000608581.1:c.323-48C>T
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369470
  ensembl transcript: ENST00000380127
  gene symbol: GDI2
  hgvsc: ENST00000380127.1:c.401-48C>T
  variant of: http://identifiers.org/hgnc/4227
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1595
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3792
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1973
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12499
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1181
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8300
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15008
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4658
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7271
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1115
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1787
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7375
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3651
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5510
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2165
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3124
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 333
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2426
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum

10-5836802-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5836802
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 5836802
    reference: chr 10
allele count: 1
allele frequency: 8.32514693884347e-6
allele num: 120118
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369475
  ensembl transcript: ENST00000380132
  gene symbol: GDI2
  hgvsc: ENST00000380132.4:c.400+46A>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369470
  ensembl transcript: ENST00000380127
  gene symbol: GDI2
  hgvsc: ENST00000380127.1:c.400+46A>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369538
  ensembl transcript: ENST00000380191
  gene symbol: GDI2
  hgvsc: ENST00000380191.4:c.388+46A>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000401733
  ensembl transcript: ENST00000456041
  gene symbol: GDI2
  hgvsc: ENST00000456041.1:c.358+46A>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369528
  ensembl transcript: ENST00000380181
  gene symbol: GDI2
  hgvsc: ENST00000380181.3:c.253+1924A>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476707
  ensembl transcript: ENST00000608581
  gene symbol: GDI2
  hgvsc: ENST00000608581.1:c.322+46A>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000394177
  ensembl transcript: ENST00000418688
  gene symbol: GDI2
  hgvsc: ENST00000418688.1:c.280+46A>G
  variant of: http://identifiers.org/hgnc/4227
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15926
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7286
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6144
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1237
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2187
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1687
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2500
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20473
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2568
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 974
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2105
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1175
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 626
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 561
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 385
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9203
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum

10-5836803-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5836803
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 5836803
    reference: chr 10
allele count: 34
allele frequency: 2.830314331379861e-4
allele num: 120128
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369528
  ensembl transcript: ENST00000380181
  gene symbol: GDI2
  hgvsc: ENST00000380181.3:c.253+1923A>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000401733
  ensembl transcript: ENST00000456041
  gene symbol: GDI2
  hgvsc: ENST00000456041.1:c.358+45A>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369475
  ensembl transcript: ENST00000380132
  gene symbol: GDI2
  hgvsc: ENST00000380132.4:c.400+45A>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369538
  ensembl transcript: ENST00000380191
  gene symbol: GDI2
  hgvsc: ENST00000380191.4:c.388+45A>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000394177
  ensembl transcript: ENST00000418688
  gene symbol: GDI2
  hgvsc: ENST00000418688.1:c.280+45A>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369470
  ensembl transcript: ENST00000380127
  gene symbol: GDI2
  hgvsc: ENST00000380127.1:c.400+45A>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476707
  ensembl transcript: ENST00000608581
  gene symbol: GDI2
  hgvsc: ENST00000608581.1:c.322+45A>G
  variant of: http://identifiers.org/hgnc/4227
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2501
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1669
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2005
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7454
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 539
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6141
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20510
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15921
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1234
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 5.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 8.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 657
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2560
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 875
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2101
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 555
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 891
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: T
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: QD

http://identifiers.org/exac.variant/10-5836807-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5836807
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 5836807
    reference: chr 10
allele count: 1
allele frequency: 8.322237017310253e-6
allele num: 120160
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369470
  ensembl transcript: ENST00000380127
  gene symbol: GDI2
  hgvsc: ENST00000380127.1:c.400+41T>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369528
  ensembl transcript: ENST00000380181
  gene symbol: GDI2
  hgvsc: ENST00000380181.3:c.253+1919T>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476707
  ensembl transcript: ENST00000608581
  gene symbol: GDI2
  hgvsc: ENST00000608581.1:c.322+41T>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369475
  ensembl transcript: ENST00000380132
  gene symbol: GDI2
  hgvsc: ENST00000380132.4:c.400+41T>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000394177
  ensembl transcript: ENST00000418688
  gene symbol: GDI2
  hgvsc: ENST00000418688.1:c.280+41T>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000401733
  ensembl transcript: ENST00000456041
  gene symbol: GDI2
  hgvsc: ENST00000456041.1:c.358+41T>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369538
  ensembl transcript: ENST00000380191
  gene symbol: GDI2
  hgvsc: ENST00000380191.4:c.388+41T>G
  variant of: http://identifiers.org/hgnc/4227
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2493
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1238
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6150
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8153
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20713
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1501
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15993
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 401
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 615
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 567
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 877
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33323
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 517
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 341
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ

10-5836808-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5836808
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 5836808
    reference: chr 10
allele count: 1
allele frequency: 8.323622440486099e-6
allele num: 120140
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476707
  ensembl transcript: ENST00000608581
  gene symbol: GDI2
  hgvsc: ENST00000608581.1:c.322+40C>A
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369538
  ensembl transcript: ENST00000380191
  gene symbol: GDI2
  hgvsc: ENST00000380191.4:c.388+40C>A
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000401733
  ensembl transcript: ENST00000456041
  gene symbol: GDI2
  hgvsc: ENST00000456041.1:c.358+40C>A
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369470
  ensembl transcript: ENST00000380127
  gene symbol: GDI2
  hgvsc: ENST00000380127.1:c.400+40C>A
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369475
  ensembl transcript: ENST00000380132
  gene symbol: GDI2
  hgvsc: ENST00000380132.4:c.400+40C>A
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369528
  ensembl transcript: ENST00000380181
  gene symbol: GDI2
  hgvsc: ENST00000380181.3:c.253+1918C>A
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000394177
  ensembl transcript: ENST00000418688
  gene symbol: GDI2
  hgvsc: ENST00000418688.1:c.280+40C>A
  variant of: http://identifiers.org/hgnc/4227
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20745
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8294
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1109
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2499
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1442
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6150
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16005
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1173
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 576
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 334
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 455
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9174
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 875
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2551
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 726
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ

10-5836817-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5836817
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 5836817
    reference: chr 10
allele count: 1
allele frequency: 8.310755780130645e-6
allele num: 120326
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476707
  ensembl transcript: ENST00000608581
  gene symbol: GDI2
  hgvsc: ENST00000608581.1:c.322+31T>C
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369528
  ensembl transcript: ENST00000380181
  gene symbol: GDI2
  hgvsc: ENST00000380181.3:c.253+1909T>C
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000401733
  ensembl transcript: ENST00000456041
  gene symbol: GDI2
  hgvsc: ENST00000456041.1:c.358+31T>C
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369470
  ensembl transcript: ENST00000380127
  gene symbol: GDI2
  hgvsc: ENST00000380127.1:c.400+31T>C
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000394177
  ensembl transcript: ENST00000418688
  gene symbol: GDI2
  hgvsc: ENST00000418688.1:c.280+31T>C
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369538
  ensembl transcript: ENST00000380191
  gene symbol: GDI2
  hgvsc: ENST00000380191.4:c.388+31T>C
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369475
  ensembl transcript: ENST00000380132
  gene symbol: GDI2
  hgvsc: ENST00000380132.4:c.400+31T>C
  variant of: http://identifiers.org/hgnc/4227
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2496
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16049
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21037
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1230
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9342
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6145
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 390
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2559
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 520
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 871
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 174
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 258
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: DP

10-5836819-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5836819
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 5836819
    reference: chr 10
allele count: 1
allele frequency: 8.305233958440609e-6
allele num: 120406
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369538
  ensembl transcript: ENST00000380191
  gene symbol: GDI2
  hgvsc: ENST00000380191.4:c.388+29A>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369528
  ensembl transcript: ENST00000380181
  gene symbol: GDI2
  hgvsc: ENST00000380181.3:c.253+1907A>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000401733
  ensembl transcript: ENST00000456041
  gene symbol: GDI2
  hgvsc: ENST00000456041.1:c.358+29A>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476707
  ensembl transcript: ENST00000608581
  gene symbol: GDI2
  hgvsc: ENST00000608581.1:c.322+29A>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369475
  ensembl transcript: ENST00000380132
  gene symbol: GDI2
  hgvsc: ENST00000380132.4:c.400+29A>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369470
  ensembl transcript: ENST00000380127
  gene symbol: GDI2
  hgvsc: ENST00000380127.1:c.400+29A>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000394177
  ensembl transcript: ENST00000418688
  gene symbol: GDI2
  hgvsc: ENST00000418688.1:c.280+29A>G
  variant of: http://identifiers.org/hgnc/4227
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21140
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6147
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 724
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1232
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9490
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2496
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16050
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 290
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2085
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4532
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2568
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQ

10-5836820-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5836820
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 5836820
    reference: chr 10
allele count: 3
allele frequency: 2.490535963339311e-5
allele num: 120456
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000394177
  ensembl transcript: ENST00000418688
  gene symbol: GDI2
  hgvsc: ENST00000418688.1:c.280+28T>C
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476707
  ensembl transcript: ENST00000608581
  gene symbol: GDI2
  hgvsc: ENST00000608581.1:c.322+28T>C
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369475
  ensembl transcript: ENST00000380132
  gene symbol: GDI2
  hgvsc: ENST00000380132.4:c.400+28T>C
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000401733
  ensembl transcript: ENST00000456041
  gene symbol: GDI2
  hgvsc: ENST00000456041.1:c.358+28T>C
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369528
  ensembl transcript: ENST00000380181
  gene symbol: GDI2
  hgvsc: ENST00000380181.3:c.253+1906T>C
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369470
  ensembl transcript: ENST00000380127
  gene symbol: GDI2
  hgvsc: ENST00000380127.1:c.400+28T>C
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369538
  ensembl transcript: ENST00000380191
  gene symbol: GDI2
  hgvsc: ENST00000380191.4:c.388+28T>C
  variant of: http://identifiers.org/hgnc/4227
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6146
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2496
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21171
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9558
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16063
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 486
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35336
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4534
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 2566
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 309
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
reference allele: A
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ

10-5836821-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5836821
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 5836821
    reference: chr 10
allele count: 1
allele frequency: 8.300546175938376e-6
allele num: 120474
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369538
  ensembl transcript: ENST00000380191
  gene symbol: GDI2
  hgvsc: ENST00000380191.4:c.388+27C>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369528
  ensembl transcript: ENST00000380181
  gene symbol: GDI2
  hgvsc: ENST00000380181.3:c.253+1905C>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369470
  ensembl transcript: ENST00000380127
  gene symbol: GDI2
  hgvsc: ENST00000380127.1:c.400+27C>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000401733
  ensembl transcript: ENST00000456041
  gene symbol: GDI2
  hgvsc: ENST00000456041.1:c.358+27C>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476707
  ensembl transcript: ENST00000608581
  gene symbol: GDI2
  hgvsc: ENST00000608581.1:c.322+27C>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369475
  ensembl transcript: ENST00000380132
  gene symbol: GDI2
  hgvsc: ENST00000380132.4:c.400+27C>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000394177
  ensembl transcript: ENST00000418688
  gene symbol: GDI2
  hgvsc: ENST00000418688.1:c.280+27C>G
  variant of: http://identifiers.org/hgnc/4227
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 611
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1230
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6145
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2496
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16066
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21201
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9620
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 475
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3212
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35460
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2569
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1173
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9274
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 870
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 291
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: South Asian
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP

10-5836824-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5836824
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 5836824
    reference: chr 10
allele count: 1
allele frequency: 8.290911502810618e-6
allele num: 120614
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000401733
  ensembl transcript: ENST00000456041
  gene symbol: GDI2
  hgvsc: ENST00000456041.1:c.358+24T>C
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369470
  ensembl transcript: ENST00000380127
  gene symbol: GDI2
  hgvsc: ENST00000380127.1:c.400+24T>C
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369528
  ensembl transcript: ENST00000380181
  gene symbol: GDI2
  hgvsc: ENST00000380181.3:c.253+1902T>C
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369538
  ensembl transcript: ENST00000380191
  gene symbol: GDI2
  hgvsc: ENST00000380191.4:c.388+24T>C
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369475
  ensembl transcript: ENST00000380132
  gene symbol: GDI2
  hgvsc: ENST00000380132.4:c.400+24T>C
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476707
  ensembl transcript: ENST00000608581
  gene symbol: GDI2
  hgvsc: ENST00000608581.1:c.322+24T>C
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000394177
  ensembl transcript: ENST00000418688
  gene symbol: GDI2
  hgvsc: ENST00000418688.1:c.280+24T>C
  variant of: http://identifiers.org/hgnc/4227
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21286
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9794
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16083
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2496
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6151
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 406
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 870
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 226
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2574
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9278
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 150
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP

10-5836827-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5836827
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 5836827
    reference: chr 10
allele count: 9
allele frequency: 7.455144878315468e-5
allele num: 120722
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476707
  ensembl transcript: ENST00000608581
  gene symbol: GDI2
  hgvsc: ENST00000608581.1:c.322+21T>C
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369475
  ensembl transcript: ENST00000380132
  gene symbol: GDI2
  hgvsc: ENST00000380132.4:c.400+21T>C
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000394177
  ensembl transcript: ENST00000418688
  gene symbol: GDI2
  hgvsc: ENST00000418688.1:c.280+21T>C
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000401733
  ensembl transcript: ENST00000456041
  gene symbol: GDI2
  hgvsc: ENST00000456041.1:c.358+21T>C
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369528
  ensembl transcript: ENST00000380181
  gene symbol: GDI2
  hgvsc: ENST00000380181.3:c.253+1899T>C
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369538
  ensembl transcript: ENST00000380191
  gene symbol: GDI2
  hgvsc: ENST00000380191.4:c.388+21T>C
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369470
  ensembl transcript: ENST00000380127
  gene symbol: GDI2
  hgvsc: ENST00000380127.1:c.400+21T>C
  variant of: http://identifiers.org/hgnc/4227
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 16104
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2495
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21391
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9900
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6152
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3226
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1174
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff

10-5836849-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5836849
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 5836849
    reference: chr 10
allele count: 1
allele frequency: 8.246334504312833e-6
allele num: 121266
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476707
  ensembl transcript: ENST00000608581
  gene symbol: GDI2
  hgvsc: ENST00000608581.1:c.321T>C
  hgvsp: ENST00000608581.1:c.321T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369528
  ensembl transcript: ENST00000380181
  gene symbol: GDI2
  hgvsc: ENST00000380181.3:c.253+1877T>C
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369470
  ensembl transcript: ENST00000380127
  gene symbol: GDI2
  hgvsc: ENST00000380127.1:c.399T>C
  hgvsp: ENST00000380127.1:c.399T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369538
  ensembl transcript: ENST00000380191
  gene symbol: GDI2
  hgvsc: ENST00000380191.4:c.387T>C
  hgvsp: ENST00000380191.4:c.387T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000394177
  ensembl transcript: ENST00000418688
  gene symbol: GDI2
  hgvsc: ENST00000418688.1:c.279T>C
  hgvsp: ENST00000418688.1:c.279T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369475
  ensembl transcript: ENST00000380132
  gene symbol: GDI2
  hgvsc: ENST00000380132.4:c.399T>C
  hgvsp: ENST00000380132.4:c.399T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000401733
  ensembl transcript: ENST00000456041
  gene symbol: GDI2
  hgvsc: ENST00000456041.1:c.357T>C
  hgvsp: ENST00000456041.1:c.357T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4227
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16159
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21675
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1227
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6146
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10231
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2497
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9362
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1172
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2082
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
hgvs: c.387T>C
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: African
population: Other
reference allele: A
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum

10-5836850-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5836850
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 5836850
    reference: chr 10
allele count: 1
allele frequency: 8.245382585751979e-6
allele num: 121280
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369538
  ensembl transcript: ENST00000380191
  gene symbol: GDI2
  hgvsc: ENST00000380191.4:c.386C>G
  hgvsp: ENSP00000369538.4:p.Ser129Cys
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369470
  ensembl transcript: ENST00000380127
  gene symbol: GDI2
  hgvsc: ENST00000380127.1:c.398C>G
  hgvsp: ENSP00000369470.1:p.Ser133Cys
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369528
  ensembl transcript: ENST00000380181
  gene symbol: GDI2
  hgvsc: ENST00000380181.3:c.253+1876C>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000394177
  ensembl transcript: ENST00000418688
  gene symbol: GDI2
  hgvsc: ENST00000418688.1:c.278C>G
  hgvsp: ENSP00000394177.1:p.Ser93Cys
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476707
  ensembl transcript: ENST00000608581
  gene symbol: GDI2
  hgvsc: ENST00000608581.1:c.320C>G
  hgvsp: ENSP00000476707.1:p.Ser107Cys
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369475
  ensembl transcript: ENST00000380132
  gene symbol: GDI2
  hgvsc: ENST00000380132.4:c.398C>G
  hgvsp: ENSP00000369475.4:p.Ser133Cys
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000401733
  ensembl transcript: ENST00000456041
  gene symbol: GDI2
  hgvsc: ENST00000456041.1:c.356C>G
  hgvsp: ENSP00000401733.1:p.Ser119Cys
  variant of: http://identifiers.org/hgnc/4227
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2497
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10242
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16157
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6144
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21682
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1227
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4526
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3222
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ser129Cys
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum

10-5836855-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5836855
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 5836855
    reference: chr 10
allele count: 1
allele frequency: 8.24279991427488e-6
allele num: 121318
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000394177
  ensembl transcript: ENST00000418688
  gene symbol: GDI2
  hgvsc: ENST00000418688.1:c.273G>C
  hgvsp: ENST00000418688.1:c.273G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476707
  ensembl transcript: ENST00000608581
  gene symbol: GDI2
  hgvsc: ENST00000608581.1:c.315G>C
  hgvsp: ENST00000608581.1:c.315G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000401733
  ensembl transcript: ENST00000456041
  gene symbol: GDI2
  hgvsc: ENST00000456041.1:c.351G>C
  hgvsp: ENST00000456041.1:c.351G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369538
  ensembl transcript: ENST00000380191
  gene symbol: GDI2
  hgvsc: ENST00000380191.4:c.381G>C
  hgvsp: ENST00000380191.4:c.381G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369470
  ensembl transcript: ENST00000380127
  gene symbol: GDI2
  hgvsc: ENST00000380127.1:c.393G>C
  hgvsp: ENST00000380127.1:c.393G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369475
  ensembl transcript: ENST00000380132
  gene symbol: GDI2
  hgvsc: ENST00000380132.4:c.393G>C
  hgvsp: ENST00000380132.4:c.393G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369528
  ensembl transcript: ENST00000380181
  gene symbol: GDI2
  hgvsc: ENST00000380181.3:c.253+1871G>C
  variant of: http://identifiers.org/hgnc/4227
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1226
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10248
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21703
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16167
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2494
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6144
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2583
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 871
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36763
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Leu127Leu
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: FS
site quality: MQ

10-5836866-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5836866
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 5836866
    reference: chr 10
allele count: 1
allele frequency: 8.240218860212928e-6
allele num: 121356
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369470
  ensembl transcript: ENST00000380127
  gene symbol: GDI2
  hgvsc: ENST00000380127.1:c.382G>A
  hgvsp: ENSP00000369470.1:p.Ala128Thr
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476707
  ensembl transcript: ENST00000608581
  gene symbol: GDI2
  hgvsc: ENST00000608581.1:c.304G>A
  hgvsp: ENSP00000476707.1:p.Ala102Thr
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369538
  ensembl transcript: ENST00000380191
  gene symbol: GDI2
  hgvsc: ENST00000380191.4:c.370G>A
  hgvsp: ENSP00000369538.4:p.Ala124Thr
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369475
  ensembl transcript: ENST00000380132
  gene symbol: GDI2
  hgvsc: ENST00000380132.4:c.382G>A
  hgvsp: ENSP00000369475.4:p.Ala128Thr
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000401733
  ensembl transcript: ENST00000456041
  gene symbol: GDI2
  hgvsc: ENST00000456041.1:c.340G>A
  hgvsp: ENSP00000401733.1:p.Ala114Thr
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000394177
  ensembl transcript: ENST00000418688
  gene symbol: GDI2
  hgvsc: ENST00000418688.1:c.262G>A
  hgvsp: ENSP00000394177.1:p.Ala88Thr
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369528
  ensembl transcript: ENST00000380181
  gene symbol: GDI2
  hgvsc: ENST00000380181.3:c.253+1860G>A
  variant of: http://identifiers.org/hgnc/4227
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 630
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10244
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16174
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6144
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2495
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1226
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21728
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1171
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Ala124Thr
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum

10-5836872-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5836872
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 5836872
    reference: chr 10
allele count: 2
allele frequency: 1.647962294622699e-5
allele num: 121362
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369538
  ensembl transcript: ENST00000380191
  gene symbol: GDI2
  hgvsc: ENST00000380191.4:c.364A>G
  hgvsp: ENSP00000369538.4:p.Thr122Ala
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: incomplete_terminal_codon_variant
  consequence: coding_sequence_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476832
  ensembl transcript: ENST00000609712
  gene symbol: GDI2
  hgvsc: ENST00000609712.1:c.376A>G
  hgvsp: ENST00000609712.1:c.376A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476707
  ensembl transcript: ENST00000608581
  gene symbol: GDI2
  hgvsc: ENST00000608581.1:c.298A>G
  hgvsp: ENSP00000476707.1:p.Thr100Ala
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000394177
  ensembl transcript: ENST00000418688
  gene symbol: GDI2
  hgvsc: ENST00000418688.1:c.256A>G
  hgvsp: ENSP00000394177.1:p.Thr86Ala
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000401733
  ensembl transcript: ENST00000456041
  gene symbol: GDI2
  hgvsc: ENST00000456041.1:c.334A>G
  hgvsp: ENSP00000401733.1:p.Thr112Ala
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369475
  ensembl transcript: ENST00000380132
  gene symbol: GDI2
  hgvsc: ENST00000380132.4:c.376A>G
  hgvsp: ENSP00000369475.4:p.Thr126Ala
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369470
  ensembl transcript: ENST00000380127
  gene symbol: GDI2
  hgvsc: ENST00000380127.1:c.376A>G
  hgvsp: ENSP00000369470.1:p.Thr126Ala
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369528
  ensembl transcript: ENST00000380181
  gene symbol: GDI2
  hgvsc: ENST00000380181.3:c.253+1854A>G
  variant of: http://identifiers.org/hgnc/4227
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1226
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6144
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16177
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10237
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2494
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21737
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4524
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9377
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2589
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Thr122Ala
num of homozygotes: 0
population: Other
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum

10-5836873-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5836873
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 5836873
    reference: chr 10
allele count: 1
allele frequency: 8.239947264337508e-6
allele num: 121360
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369538
  ensembl transcript: ENST00000380191
  gene symbol: GDI2
  hgvsc: ENST00000380191.4:c.363C>A
  hgvsp: ENST00000380191.4:c.363C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369470
  ensembl transcript: ENST00000380127
  gene symbol: GDI2
  hgvsc: ENST00000380127.1:c.375C>A
  hgvsp: ENST00000380127.1:c.375C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369475
  ensembl transcript: ENST00000380132
  gene symbol: GDI2
  hgvsc: ENST00000380132.4:c.375C>A
  hgvsp: ENST00000380132.4:c.375C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000394177
  ensembl transcript: ENST00000418688
  gene symbol: GDI2
  hgvsc: ENST00000418688.1:c.255C>A
  hgvsp: ENST00000418688.1:c.255C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476707
  ensembl transcript: ENST00000608581
  gene symbol: GDI2
  hgvsc: ENST00000608581.1:c.297C>A
  hgvsp: ENST00000608581.1:c.297C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476832
  ensembl transcript: ENST00000609712
  gene symbol: GDI2
  hgvsc: ENST00000609712.1:c.375C>A
  hgvsp: ENST00000609712.1:c.375C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000401733
  ensembl transcript: ENST00000456041
  gene symbol: GDI2
  hgvsc: ENST00000456041.1:c.333C>A
  hgvsp: ENST00000456041.1:c.333C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369528
  ensembl transcript: ENST00000380181
  gene symbol: GDI2
  hgvsc: ENST00000380181.3:c.253+1853C>A
  variant of: http://identifiers.org/hgnc/4227
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10236
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21743
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2495
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6144
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16175
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1226
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ser121Ser
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
reference allele: G
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS

10-5836889-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5836889
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 5836889
    reference: chr 10
allele count: 1
allele frequency: 8.239404126293587e-6
allele num: 121368
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369538
  ensembl transcript: ENST00000380191
  gene symbol: GDI2
  hgvsc: ENST00000380191.4:c.347T>C
  hgvsp: ENSP00000369538.4:p.Ile116Thr
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000401733
  ensembl transcript: ENST00000456041
  gene symbol: GDI2
  hgvsc: ENST00000456041.1:c.317T>C
  hgvsp: ENSP00000401733.1:p.Ile106Thr
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000394177
  ensembl transcript: ENST00000418688
  gene symbol: GDI2
  hgvsc: ENST00000418688.1:c.239T>C
  hgvsp: ENSP00000394177.1:p.Ile80Thr
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369528
  ensembl transcript: ENST00000380181
  gene symbol: GDI2
  hgvsc: ENST00000380181.3:c.253+1837T>C
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476707
  ensembl transcript: ENST00000608581
  gene symbol: GDI2
  hgvsc: ENST00000608581.1:c.281T>C
  hgvsp: ENSP00000476707.1:p.Ile94Thr
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476832
  ensembl transcript: ENST00000609712
  gene symbol: GDI2
  hgvsc: ENST00000609712.1:c.359T>C
  hgvsp: ENSP00000476832.1:p.Ile120Thr
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369470
  ensembl transcript: ENST00000380127
  gene symbol: GDI2
  hgvsc: ENST00000380127.1:c.359T>C
  hgvsp: ENSP00000369470.1:p.Ile120Thr
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369475
  ensembl transcript: ENST00000380132
  gene symbol: GDI2
  hgvsc: ENST00000380132.4:c.359T>C
  hgvsp: ENSP00000369475.4:p.Ile120Thr
  variant of: http://identifiers.org/hgnc/4227
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1225
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10222
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6142
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2493
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16178
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21762
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3224
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ile116Thr
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff

10-5836898-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5836898
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 5836898
    reference: chr 10
allele count: 2
allele frequency: 1.647935137272997e-5
allele num: 121364
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369538
  ensembl transcript: ENST00000380191
  gene symbol: GDI2
  hgvsc: ENST00000380191.4:c.338G>A
  hgvsp: ENSP00000369538.4:p.Gly113Asp
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369528
  ensembl transcript: ENST00000380181
  gene symbol: GDI2
  hgvsc: ENST00000380181.3:c.253+1828G>A
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476707
  ensembl transcript: ENST00000608581
  gene symbol: GDI2
  hgvsc: ENST00000608581.1:c.272G>A
  hgvsp: ENSP00000476707.1:p.Gly91Asp
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369470
  ensembl transcript: ENST00000380127
  gene symbol: GDI2
  hgvsc: ENST00000380127.1:c.350G>A
  hgvsp: ENSP00000369470.1:p.Gly117Asp
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000401733
  ensembl transcript: ENST00000456041
  gene symbol: GDI2
  hgvsc: ENST00000456041.1:c.308G>A
  hgvsp: ENSP00000401733.1:p.Gly103Asp
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476832
  ensembl transcript: ENST00000609712
  gene symbol: GDI2
  hgvsc: ENST00000609712.1:c.350G>A
  hgvsp: ENSP00000476832.1:p.Gly117Asp
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369475
  ensembl transcript: ENST00000380132
  gene symbol: GDI2
  hgvsc: ENST00000380132.4:c.350G>A
  hgvsp: ENSP00000369475.4:p.Gly117Asp
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000394177
  ensembl transcript: ENST00000418688
  gene symbol: GDI2
  hgvsc: ENST00000418688.1:c.230G>A
  hgvsp: ENSP00000394177.1:p.Gly77Asp
  variant of: http://identifiers.org/hgnc/4227
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6142
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10220
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1226
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2493
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16175
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21764
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1172
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36802
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Gly113Asp
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff

10-5836904-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5836904
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 5836904
    reference: chr 10
allele count: 2
allele frequency: 1.647935137272997e-5
allele num: 121364
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000401733
  ensembl transcript: ENST00000456041
  gene symbol: GDI2
  hgvsc: ENST00000456041.1:c.302A>G
  hgvsp: ENSP00000401733.1:p.Tyr101Cys
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000394177
  ensembl transcript: ENST00000418688
  gene symbol: GDI2
  hgvsc: ENST00000418688.1:c.224A>G
  hgvsp: ENSP00000394177.1:p.Tyr75Cys
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476707
  ensembl transcript: ENST00000608581
  gene symbol: GDI2
  hgvsc: ENST00000608581.1:c.266A>G
  hgvsp: ENSP00000476707.1:p.Tyr89Cys
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476832
  ensembl transcript: ENST00000609712
  gene symbol: GDI2
  hgvsc: ENST00000609712.1:c.344A>G
  hgvsp: ENSP00000476832.1:p.Tyr115Cys
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369470
  ensembl transcript: ENST00000380127
  gene symbol: GDI2
  hgvsc: ENST00000380127.1:c.344A>G
  hgvsp: ENSP00000369470.1:p.Tyr115Cys
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369475
  ensembl transcript: ENST00000380132
  gene symbol: GDI2
  hgvsc: ENST00000380132.4:c.344A>G
  hgvsp: ENSP00000369475.4:p.Tyr115Cys
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369528
  ensembl transcript: ENST00000380181
  gene symbol: GDI2
  hgvsc: ENST00000380181.3:c.253+1822A>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369538
  ensembl transcript: ENST00000380191
  gene symbol: GDI2
  hgvsc: ENST00000380191.4:c.332A>G
  hgvsp: ENSP00000369538.4:p.Tyr111Cys
  variant of: http://identifiers.org/hgnc/4227
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10221
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6144
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2493
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21762
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16176
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1224
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9377
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Tyr111Cys
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: T
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQ

10-5836930-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5836930
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 5836930
    reference: chr 10
allele count: 2
allele frequency: 1.648098094798602e-5
allele num: 121352
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369475
  ensembl transcript: ENST00000380132
  gene symbol: GDI2
  hgvsc: ENST00000380132.4:c.318T>C
  hgvsp: ENST00000380132.4:c.318T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369528
  ensembl transcript: ENST00000380181
  gene symbol: GDI2
  hgvsc: ENST00000380181.3:c.253+1796T>C
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000401733
  ensembl transcript: ENST00000456041
  gene symbol: GDI2
  hgvsc: ENST00000456041.1:c.276T>C
  hgvsp: ENST00000456041.1:c.276T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000394177
  ensembl transcript: ENST00000418688
  gene symbol: GDI2
  hgvsc: ENST00000418688.1:c.198T>C
  hgvsp: ENST00000418688.1:c.198T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369470
  ensembl transcript: ENST00000380127
  gene symbol: GDI2
  hgvsc: ENST00000380127.1:c.318T>C
  hgvsp: ENST00000380127.1:c.318T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369538
  ensembl transcript: ENST00000380191
  gene symbol: GDI2
  hgvsc: ENST00000380191.4:c.306T>C
  hgvsp: ENST00000380191.4:c.306T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476832
  ensembl transcript: ENST00000609712
  gene symbol: GDI2
  hgvsc: ENST00000609712.1:c.318T>C
  hgvsp: ENST00000609712.1:c.318T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476707
  ensembl transcript: ENST00000608581
  gene symbol: GDI2
  hgvsc: ENST00000608581.1:c.240T>C
  hgvsp: ENST00000608581.1:c.240T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4227
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2492
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16180
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6142
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1223
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10165
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21788
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36780
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2084
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Phe102Phe
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
reference allele: A
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP

10-5836941-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5836941
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 5836941
    reference: chr 10
allele count: 1
allele frequency: 8.241577108195424e-6
allele num: 121336
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476832
  ensembl transcript: ENST00000609712
  gene symbol: GDI2
  hgvsc: ENST00000609712.1:c.307T>C
  hgvsp: ENSP00000476832.1:p.Tyr103His
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369528
  ensembl transcript: ENST00000380181
  gene symbol: GDI2
  hgvsc: ENST00000380181.3:c.253+1785T>C
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000401733
  ensembl transcript: ENST00000456041
  gene symbol: GDI2
  hgvsc: ENST00000456041.1:c.265T>C
  hgvsp: ENSP00000401733.1:p.Tyr89His
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369470
  ensembl transcript: ENST00000380127
  gene symbol: GDI2
  hgvsc: ENST00000380127.1:c.307T>C
  hgvsp: ENSP00000369470.1:p.Tyr103His
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476707
  ensembl transcript: ENST00000608581
  gene symbol: GDI2
  hgvsc: ENST00000608581.1:c.229T>C
  hgvsp: ENSP00000476707.1:p.Tyr77His
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369475
  ensembl transcript: ENST00000380132
  gene symbol: GDI2
  hgvsc: ENST00000380132.4:c.307T>C
  hgvsp: ENSP00000369475.4:p.Tyr103His
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369538
  ensembl transcript: ENST00000380191
  gene symbol: GDI2
  hgvsc: ENST00000380191.4:c.295T>C
  hgvsp: ENSP00000369538.4:p.Tyr99His
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000394177
  ensembl transcript: ENST00000418688
  gene symbol: GDI2
  hgvsc: ENST00000418688.1:c.187T>C
  hgvsp: ENSP00000394177.1:p.Tyr63His
  variant of: http://identifiers.org/hgnc/4227
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 21777
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2493
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1223
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10143
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6142
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16182
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 872
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9362
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Tyr99His
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: African
reference allele: A
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum

10-5836948-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5836948
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 5836948
    reference: chr 10
allele count: 1
allele frequency: 8.242664029014178e-6
allele num: 121320
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000394177
  ensembl transcript: ENST00000418688
  gene symbol: GDI2
  hgvsc: ENST00000418688.1:c.180A>G
  hgvsp: ENST00000418688.1:c.180A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369528
  ensembl transcript: ENST00000380181
  gene symbol: GDI2
  hgvsc: ENST00000380181.3:c.253+1778A>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369538
  ensembl transcript: ENST00000380191
  gene symbol: GDI2
  hgvsc: ENST00000380191.4:c.288A>G
  hgvsp: ENST00000380191.4:c.288A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000401733
  ensembl transcript: ENST00000456041
  gene symbol: GDI2
  hgvsc: ENST00000456041.1:c.258A>G
  hgvsp: ENST00000456041.1:c.258A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369470
  ensembl transcript: ENST00000380127
  gene symbol: GDI2
  hgvsc: ENST00000380127.1:c.300A>G
  hgvsp: ENST00000380127.1:c.300A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476707
  ensembl transcript: ENST00000608581
  gene symbol: GDI2
  hgvsc: ENST00000608581.1:c.222A>G
  hgvsp: ENST00000608581.1:c.222A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476832
  ensembl transcript: ENST00000609712
  gene symbol: GDI2
  hgvsc: ENST00000609712.1:c.300A>G
  hgvsp: ENST00000609712.1:c.300A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369475
  ensembl transcript: ENST00000380132
  gene symbol: GDI2
  hgvsc: ENST00000380132.4:c.300A>G
  hgvsp: ENST00000380132.4:c.300A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4227
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16179
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1223
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2492
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21778
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6142
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10116
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3226
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4515
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Val96Val
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum

10-5836953-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5836953
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 5836953
    reference: chr 10
allele count: 1
allele frequency: 8.243887157672586e-6
allele num: 121302
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369470
  ensembl transcript: ENST00000380127
  gene symbol: GDI2
  hgvsc: ENST00000380127.1:c.295G>A
  hgvsp: ENSP00000369470.1:p.Glu99Lys
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000394177
  ensembl transcript: ENST00000418688
  gene symbol: GDI2
  hgvsc: ENST00000418688.1:c.175G>A
  hgvsp: ENSP00000394177.1:p.Glu59Lys
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476832
  ensembl transcript: ENST00000609712
  gene symbol: GDI2
  hgvsc: ENST00000609712.1:c.295G>A
  hgvsp: ENSP00000476832.1:p.Glu99Lys
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369538
  ensembl transcript: ENST00000380191
  gene symbol: GDI2
  hgvsc: ENST00000380191.4:c.283G>A
  hgvsp: ENSP00000369538.4:p.Glu95Lys
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369475
  ensembl transcript: ENST00000380132
  gene symbol: GDI2
  hgvsc: ENST00000380132.4:c.295G>A
  hgvsp: ENSP00000369475.4:p.Glu99Lys
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476707
  ensembl transcript: ENST00000608581
  gene symbol: GDI2
  hgvsc: ENST00000608581.1:c.217G>A
  hgvsp: ENSP00000476707.1:p.Glu73Lys
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369528
  ensembl transcript: ENST00000380181
  gene symbol: GDI2
  hgvsc: ENST00000380181.3:c.253+1773G>A
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000401733
  ensembl transcript: ENST00000456041
  gene symbol: GDI2
  hgvsc: ENST00000456041.1:c.254-1G>A
  variant of: http://identifiers.org/hgnc/4227
canonical: false
consequence: splice acceptor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2492
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6142
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1223
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21786
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10084
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16181
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3228
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 3.25e1
  variant carriers: 0
hgvs: c.254-1G>A
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: MQ

10-5836955-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5836955
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 5836955
    reference: chr 10
allele count: 1
allele frequency: 8.244566830458728e-6
allele num: 121292
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476832
  ensembl transcript: ENST00000609712
  gene symbol: GDI2
  hgvsc: ENST00000609712.1:c.293C>T
  hgvsp: ENSP00000476832.1:p.Thr98Ile
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369528
  ensembl transcript: ENST00000380181
  gene symbol: GDI2
  hgvsc: ENST00000380181.3:c.253+1771C>T
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369475
  ensembl transcript: ENST00000380132
  gene symbol: GDI2
  hgvsc: ENST00000380132.4:c.293C>T
  hgvsp: ENSP00000369475.4:p.Thr98Ile
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000401733
  ensembl transcript: ENST00000456041
  gene symbol: GDI2
  hgvsc: ENST00000456041.1:c.254-3C>T
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476707
  ensembl transcript: ENST00000608581
  gene symbol: GDI2
  hgvsc: ENST00000608581.1:c.215C>T
  hgvsp: ENSP00000476707.1:p.Thr72Ile
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369538
  ensembl transcript: ENST00000380191
  gene symbol: GDI2
  hgvsc: ENST00000380191.4:c.281C>T
  hgvsp: ENSP00000369538.4:p.Thr94Ile
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000394177
  ensembl transcript: ENST00000418688
  gene symbol: GDI2
  hgvsc: ENST00000418688.1:c.173C>T
  hgvsp: ENSP00000394177.1:p.Thr58Ile
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369470
  ensembl transcript: ENST00000380127
  gene symbol: GDI2
  hgvsc: ENST00000380127.1:c.293C>T
  hgvsp: ENSP00000369470.1:p.Thr98Ile
  variant of: http://identifiers.org/hgnc/4227
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1224
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6143
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10082
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16176
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2493
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21781
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2083
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 871
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Thr94Ile
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum

10-5836966-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5836966
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 5836966
    reference: chr 10
allele count: 1
allele frequency: 8.251778258214646e-6
allele num: 121186
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369528
  ensembl transcript: ENST00000380181
  gene symbol: GDI2
  hgvsc: ENST00000380181.3:c.253+1760G>C
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369470
  ensembl transcript: ENST00000380127
  gene symbol: GDI2
  hgvsc: ENST00000380127.1:c.282G>C
  hgvsp: ENSP00000369470.1:p.Met94Ile
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369538
  ensembl transcript: ENST00000380191
  gene symbol: GDI2
  hgvsc: ENST00000380191.4:c.270G>C
  hgvsp: ENSP00000369538.4:p.Met90Ile
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476707
  ensembl transcript: ENST00000608581
  gene symbol: GDI2
  hgvsc: ENST00000608581.1:c.204G>C
  hgvsp: ENSP00000476707.1:p.Met68Ile
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369475
  ensembl transcript: ENST00000380132
  gene symbol: GDI2
  hgvsc: ENST00000380132.4:c.282G>C
  hgvsp: ENSP00000369475.4:p.Met94Ile
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000401733
  ensembl transcript: ENST00000456041
  gene symbol: GDI2
  hgvsc: ENST00000456041.1:c.254-14G>C
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000394177
  ensembl transcript: ENST00000418688
  gene symbol: GDI2
  hgvsc: ENST00000418688.1:c.162G>C
  hgvsp: ENSP00000394177.1:p.Met54Ile
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476832
  ensembl transcript: ENST00000609712
  gene symbol: GDI2
  hgvsc: ENST00000609712.1:c.282G>C
  hgvsp: ENSP00000476832.1:p.Met94Ile
  variant of: http://identifiers.org/hgnc/4227
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1224
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21757
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6142
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2493
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16173
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9959
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1171
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3224
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2574
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 238
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Met90Ile
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: C
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: QD
site quality: ClippingRankSum

10-5836967-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5836967
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 5836967
    reference: chr 10
allele count: 31
allele frequency: 2.557882403419311e-4
allele num: 121194
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476707
  ensembl transcript: ENST00000608581
  gene symbol: GDI2
  hgvsc: ENST00000608581.1:c.203T>C
  hgvsp: ENSP00000476707.1:p.Met68Thr
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369538
  ensembl transcript: ENST00000380191
  gene symbol: GDI2
  hgvsc: ENST00000380191.4:c.269T>C
  hgvsp: ENSP00000369538.4:p.Met90Thr
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369475
  ensembl transcript: ENST00000380132
  gene symbol: GDI2
  hgvsc: ENST00000380132.4:c.281T>C
  hgvsp: ENSP00000369475.4:p.Met94Thr
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476832
  ensembl transcript: ENST00000609712
  gene symbol: GDI2
  hgvsc: ENST00000609712.1:c.281T>C
  hgvsp: ENSP00000476832.1:p.Met94Thr
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000394177
  ensembl transcript: ENST00000418688
  gene symbol: GDI2
  hgvsc: ENST00000418688.1:c.161T>C
  hgvsp: ENSP00000394177.1:p.Met54Thr
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000401733
  ensembl transcript: ENST00000456041
  gene symbol: GDI2
  hgvsc: ENST00000456041.1:c.254-15T>C
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369528
  ensembl transcript: ENST00000380181
  gene symbol: GDI2
  hgvsc: ENST00000380181.3:c.253+1759T>C
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369470
  ensembl transcript: ENST00000380127
  gene symbol: GDI2
  hgvsc: ENST00000380127.1:c.281T>C
  hgvsp: ENSP00000369470.1:p.Met94Thr
  variant of: http://identifiers.org/hgnc/4227
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16172
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6139
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2490
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1221
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 21759
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9956
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 7.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 7.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 36576
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 870
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Met90Thr
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: A
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP

10-5836987-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5836987
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 5836987
    reference: chr 10
allele count: 5
allele frequency: 4.144562334217506e-5
allele num: 120640
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000401733
  ensembl transcript: ENST00000456041
  gene symbol: GDI2
  hgvsc: ENST00000456041.1:c.254-35T>C
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476832
  ensembl transcript: ENST00000609712
  gene symbol: GDI2
  hgvsc: ENST00000609712.1:c.266-5T>C
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000394177
  ensembl transcript: ENST00000418688
  gene symbol: GDI2
  hgvsc: ENST00000418688.1:c.146-5T>C
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369528
  ensembl transcript: ENST00000380181
  gene symbol: GDI2
  hgvsc: ENST00000380181.3:c.253+1739T>C
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476707
  ensembl transcript: ENST00000608581
  gene symbol: GDI2
  hgvsc: ENST00000608581.1:c.188-5T>C
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369470
  ensembl transcript: ENST00000380127
  gene symbol: GDI2
  hgvsc: ENST00000380127.1:c.266-5T>C
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369538
  ensembl transcript: ENST00000380191
  gene symbol: GDI2
  hgvsc: ENST00000380191.4:c.254-5T>C
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369475
  ensembl transcript: ENST00000380132
  gene symbol: GDI2
  hgvsc: ENST00000380132.4:c.266-5T>C
  variant of: http://identifiers.org/hgnc/4227
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6137
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9429
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 669
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1220
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 21528
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16098
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2490
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2070
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35827
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4481
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9274
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 3.75e1
  variant carriers: 0
hgvs: c.254-5T>C
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: Other
reference allele: A
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD

10-5836996-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5836996
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 5836996
    reference: chr 10
allele count: 1
allele frequency: 8.325285557294615e-6
allele num: 120116
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000401733
  ensembl transcript: ENST00000456041
  gene symbol: GDI2
  hgvsc: ENST00000456041.1:c.254-44T>C
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369538
  ensembl transcript: ENST00000380191
  gene symbol: GDI2
  hgvsc: ENST00000380191.4:c.254-14T>C
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476832
  ensembl transcript: ENST00000609712
  gene symbol: GDI2
  hgvsc: ENST00000609712.1:c.266-14T>C
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476707
  ensembl transcript: ENST00000608581
  gene symbol: GDI2
  hgvsc: ENST00000608581.1:c.188-14T>C
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369470
  ensembl transcript: ENST00000380127
  gene symbol: GDI2
  hgvsc: ENST00000380127.1:c.266-14T>C
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000394177
  ensembl transcript: ENST00000418688
  gene symbol: GDI2
  hgvsc: ENST00000418688.1:c.146-14T>C
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369475
  ensembl transcript: ENST00000380132
  gene symbol: GDI2
  hgvsc: ENST00000380132.4:c.266-14T>C
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369528
  ensembl transcript: ENST00000380181
  gene symbol: GDI2
  hgvsc: ENST00000380181.3:c.253+1730T>C
  variant of: http://identifiers.org/hgnc/4227
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1406
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6112
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15970
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2485
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1218
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8796
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21142
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 258
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 864
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1165
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9083
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34799
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3156
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: African
population: Other
reference allele: A
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum

10-5836997-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5836997
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 5836997
    reference: chr 10
allele count: 1
allele frequency: 8.340283569641367e-6
allele num: 119900
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369528
  ensembl transcript: ENST00000380181
  gene symbol: GDI2
  hgvsc: ENST00000380181.3:c.253+1729A>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000401733
  ensembl transcript: ENST00000456041
  gene symbol: GDI2
  hgvsc: ENST00000456041.1:c.254-45A>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369475
  ensembl transcript: ENST00000380132
  gene symbol: GDI2
  hgvsc: ENST00000380132.4:c.266-15A>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369538
  ensembl transcript: ENST00000380191
  gene symbol: GDI2
  hgvsc: ENST00000380191.4:c.254-15A>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369470
  ensembl transcript: ENST00000380127
  gene symbol: GDI2
  hgvsc: ENST00000380127.1:c.266-15A>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476832
  ensembl transcript: ENST00000609712
  gene symbol: GDI2
  hgvsc: ENST00000609712.1:c.266-15A>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000394177
  ensembl transcript: ENST00000418688
  gene symbol: GDI2
  hgvsc: ENST00000418688.1:c.146-15A>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476707
  ensembl transcript: ENST00000608581
  gene symbol: GDI2
  hgvsc: ENST00000608581.1:c.188-15A>G
  variant of: http://identifiers.org/hgnc/4227
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15888
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2480
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1219
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8499
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1779
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6102
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20938
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4478
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1868
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 365
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3145
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: MQRankSum

10-5837003-AAACTAT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5837003
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 5836997
    reference: chr 10
allele count: 1
allele frequency: 8.364001338240215e-6
allele num: 119560
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476707
  ensembl transcript: ENST00000608581
  gene symbol: GDI2
  hgvsc: ENST00000608581.1:c.188-27_188-22delATAGTT
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369475
  ensembl transcript: ENST00000380132
  gene symbol: GDI2
  hgvsc: ENST00000380132.4:c.266-27_266-22delATAGTT
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369470
  ensembl transcript: ENST00000380127
  gene symbol: GDI2
  hgvsc: ENST00000380127.1:c.266-27_266-22delATAGTT
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369538
  ensembl transcript: ENST00000380191
  gene symbol: GDI2
  hgvsc: ENST00000380191.4:c.254-27_254-22delATAGTT
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476832
  ensembl transcript: ENST00000609712
  gene symbol: GDI2
  hgvsc: ENST00000609712.1:c.266-27_266-22delATAGTT
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000401733
  ensembl transcript: ENST00000456041
  gene symbol: GDI2
  hgvsc: ENST00000456041.1:c.254-57_254-52delATAGTT
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000394177
  ensembl transcript: ENST00000418688
  gene symbol: GDI2
  hgvsc: ENST00000418688.1:c.146-27_146-22delATAGTT
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369528
  ensembl transcript: ENST00000380181
  gene symbol: GDI2
  variant of: http://identifiers.org/hgnc/4227
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 796
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2471
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8046
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6039
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20458
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15585
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 753
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2584
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1213
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 644
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2507
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: South Asian
population: Other
reference allele: AAACTAT
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD

10-5837008-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5837008
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 5837008
    reference: chr 10
allele count: 5
allele frequency: 4.193927193423922e-5
allele num: 119220
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369538
  ensembl transcript: ENST00000380191
  gene symbol: GDI2
  hgvsc: ENST00000380191.4:c.254-26T>C
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000394177
  ensembl transcript: ENST00000418688
  gene symbol: GDI2
  hgvsc: ENST00000418688.1:c.146-26T>C
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369475
  ensembl transcript: ENST00000380132
  gene symbol: GDI2
  hgvsc: ENST00000380132.4:c.266-26T>C
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000401733
  ensembl transcript: ENST00000456041
  gene symbol: GDI2
  hgvsc: ENST00000456041.1:c.254-56T>C
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476832
  ensembl transcript: ENST00000609712
  gene symbol: GDI2
  hgvsc: ENST00000609712.1:c.266-26T>C
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369470
  ensembl transcript: ENST00000380127
  gene symbol: GDI2
  hgvsc: ENST00000380127.1:c.266-26T>C
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369528
  ensembl transcript: ENST00000380181
  gene symbol: GDI2
  hgvsc: ENST00000380181.3:c.253+1718T>C
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476707
  ensembl transcript: ENST00000608581
  gene symbol: GDI2
  hgvsc: ENST00000608581.1:c.188-26T>C
  variant of: http://identifiers.org/hgnc/4227
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1679
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15085
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7309
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19410
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2452
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5964
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3916
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1213
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 226
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2044
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30938
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 929
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1157
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: Other
reference allele: A
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD

10-5837014-TAA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5837014
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 5837012
    reference: chr 10
allele count: 1
allele frequency: 8.442665856170744e-6
allele num: 118446
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476832
  ensembl transcript: ENST00000609712
  gene symbol: GDI2
  hgvsc: ENST00000609712.1:c.266-34_266-33delTT
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476707
  ensembl transcript: ENST00000608581
  gene symbol: GDI2
  hgvsc: ENST00000608581.1:c.188-34_188-33delTT
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369470
  ensembl transcript: ENST00000380127
  gene symbol: GDI2
  hgvsc: ENST00000380127.1:c.266-34_266-33delTT
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369538
  ensembl transcript: ENST00000380191
  gene symbol: GDI2
  hgvsc: ENST00000380191.4:c.254-34_254-33delTT
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369475
  ensembl transcript: ENST00000380132
  gene symbol: GDI2
  hgvsc: ENST00000380132.4:c.266-34_266-33delTT
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000401733
  ensembl transcript: ENST00000456041
  gene symbol: GDI2
  hgvsc: ENST00000456041.1:c.254-64_254-63delTT
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369528
  ensembl transcript: ENST00000380181
  gene symbol: GDI2
  hgvsc: ENST00000380181.3:c.253+1710_253+1711delTT
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000394177
  ensembl transcript: ENST00000418688
  gene symbol: GDI2
  hgvsc: ENST00000418688.1:c.146-34_146-33delTT
  variant of: http://identifiers.org/hgnc/4227
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5998
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13403
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4965
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1056
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16975
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2405
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1206
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6147
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5595
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 488
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 545
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 850
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 554
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1675
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4859
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
population: East Asian
population: African
reference allele: TAA
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum

http://identifiers.org/exac.variant/10-5837016-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5837016
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 5837016
    reference: chr 10
allele count: 1
allele frequency: 8.446659346228567e-6
allele num: 118390
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000394177
  ensembl transcript: ENST00000418688
  gene symbol: GDI2
  hgvsc: ENST00000418688.1:c.146-34T>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476707
  ensembl transcript: ENST00000608581
  gene symbol: GDI2
  hgvsc: ENST00000608581.1:c.188-34T>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369475
  ensembl transcript: ENST00000380132
  gene symbol: GDI2
  hgvsc: ENST00000380132.4:c.266-34T>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000401733
  ensembl transcript: ENST00000456041
  gene symbol: GDI2
  hgvsc: ENST00000456041.1:c.254-64T>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369528
  ensembl transcript: ENST00000380181
  gene symbol: GDI2
  hgvsc: ENST00000380181.3:c.253+1710T>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476832
  ensembl transcript: ENST00000609712
  gene symbol: GDI2
  hgvsc: ENST00000609712.1:c.266-34T>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369470
  ensembl transcript: ENST00000380127
  gene symbol: GDI2
  hgvsc: ENST00000380127.1:c.266-34T>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369538
  ensembl transcript: ENST00000380191
  gene symbol: GDI2
  hgvsc: ENST00000380191.4:c.254-34T>G
  variant of: http://identifiers.org/hgnc/4227
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13066
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1081
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5507
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6148
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2401
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6137
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1205
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5447
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16745
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1760
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 369
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2833
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 541
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 412
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 849
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: African
population: South Asian
reference allele: A
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: FS
site quality: QD

http://identifiers.org/exac.variant/10-5837031-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5837031
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 5837031
    reference: chr 10
allele count: 2
allele frequency: 1.730433127411791e-5
allele num: 115578
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369538
  ensembl transcript: ENST00000380191
  gene symbol: GDI2
  hgvsc: ENST00000380191.4:c.254-49T>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476707
  ensembl transcript: ENST00000608581
  gene symbol: GDI2
  hgvsc: ENST00000608581.1:c.188-49T>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369470
  ensembl transcript: ENST00000380127
  gene symbol: GDI2
  hgvsc: ENST00000380127.1:c.266-49T>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369528
  ensembl transcript: ENST00000380181
  gene symbol: GDI2
  hgvsc: ENST00000380181.3:c.253+1695T>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000394177
  ensembl transcript: ENST00000418688
  gene symbol: GDI2
  hgvsc: ENST00000418688.1:c.146-49T>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000401733
  ensembl transcript: ENST00000456041
  gene symbol: GDI2
  hgvsc: ENST00000456041.1:c.254-79T>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476832
  ensembl transcript: ENST00000609712
  gene symbol: GDI2
  hgvsc: ENST00000609712.1:c.266-49T>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369475
  ensembl transcript: ENST00000380132
  gene symbol: GDI2
  hgvsc: ENST00000380132.4:c.266-49T>G
  variant of: http://identifiers.org/hgnc/4227
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4477
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2003
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1199
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5953
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7740
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2272
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10880
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10306
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12814
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 619
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2769
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5402
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 834
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 530
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4276
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4929
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10937
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3084
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: A
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum

10-5838677-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5838677
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 5838677
    reference: chr 10
allele count: 1
allele frequency: 8.287201246395068e-6
allele num: 120668
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476707
  ensembl transcript: ENST00000608581
  gene symbol: GDI2
  hgvsc: ENST00000608581.1:c.187+49T>C
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000394177
  ensembl transcript: ENST00000418688
  gene symbol: GDI2
  hgvsc: ENST00000418688.1:c.145+49T>C
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000401733
  ensembl transcript: ENST00000456041
  gene symbol: GDI2
  hgvsc: ENST00000456041.1:c.253+49T>C
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369538
  ensembl transcript: ENST00000380191
  gene symbol: GDI2
  hgvsc: ENST00000380191.4:c.253+49T>C
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369528
  ensembl transcript: ENST00000380181
  gene symbol: GDI2
  hgvsc: ENST00000380181.3:c.253+49T>C
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369470
  ensembl transcript: ENST00000380127
  gene symbol: GDI2
  hgvsc: ENST00000380127.1:c.265+49T>C
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476832
  ensembl transcript: ENST00000609712
  gene symbol: GDI2
  hgvsc: ENST00000609712.1:c.265+49T>C
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369475
  ensembl transcript: ENST00000380132
  gene symbol: GDI2
  hgvsc: ENST00000380132.4:c.265+49T>C
  variant of: http://identifiers.org/hgnc/4227
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6015
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7581
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 683
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17159
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 845
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2014
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21908
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1880
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 957
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 891
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 338
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10031
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 367
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD

http://identifiers.org/exac.variant/10-5838689-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5838689
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 5838689
    reference: chr 10
allele count: 40
allele frequency: 3.312190517198549e-4
allele num: 120766
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476707
  ensembl transcript: ENST00000608581
  gene symbol: GDI2
  hgvsc: ENST00000608581.1:c.187+37T>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369528
  ensembl transcript: ENST00000380181
  gene symbol: GDI2
  hgvsc: ENST00000380181.3:c.253+37T>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369538
  ensembl transcript: ENST00000380191
  gene symbol: GDI2
  hgvsc: ENST00000380191.4:c.253+37T>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000394177
  ensembl transcript: ENST00000418688
  gene symbol: GDI2
  hgvsc: ENST00000418688.1:c.145+37T>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369475
  ensembl transcript: ENST00000380132
  gene symbol: GDI2
  hgvsc: ENST00000380132.4:c.265+37T>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369470
  ensembl transcript: ENST00000380127
  gene symbol: GDI2
  hgvsc: ENST00000380127.1:c.265+37T>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476832
  ensembl transcript: ENST00000609712
  gene symbol: GDI2
  hgvsc: ENST00000609712.1:c.265+37T>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000401733
  ensembl transcript: ENST00000456041
  gene symbol: GDI2
  hgvsc: ENST00000456041.1:c.253+37T>G
  variant of: http://identifiers.org/hgnc/4227
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8957
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 22294
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 581
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6007
  bin: 3.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 686
  bin: 4.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1876
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17286
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 277
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1957
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1754
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
reference allele: A
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: MQ

10-5838691-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5838691
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 5838691
    reference: chr 10
allele count: 4
allele frequency: 3.31208081477188e-5
allele num: 120770
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000401733
  ensembl transcript: ENST00000456041
  gene symbol: GDI2
  hgvsc: ENST00000456041.1:c.253+35T>C
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000394177
  ensembl transcript: ENST00000418688
  gene symbol: GDI2
  hgvsc: ENST00000418688.1:c.145+35T>C
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476707
  ensembl transcript: ENST00000608581
  gene symbol: GDI2
  hgvsc: ENST00000608581.1:c.187+35T>C
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369475
  ensembl transcript: ENST00000380132
  gene symbol: GDI2
  hgvsc: ENST00000380132.4:c.265+35T>C
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369538
  ensembl transcript: ENST00000380191
  gene symbol: GDI2
  hgvsc: ENST00000380191.4:c.253+35T>C
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369528
  ensembl transcript: ENST00000380181
  gene symbol: GDI2
  hgvsc: ENST00000380181.3:c.253+35T>C
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369470
  ensembl transcript: ENST00000380127
  gene symbol: GDI2
  hgvsc: ENST00000380127.1:c.265+35T>C
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476832
  ensembl transcript: ENST00000609712
  gene symbol: GDI2
  hgvsc: ENST00000609712.1:c.265+35T>C
  variant of: http://identifiers.org/hgnc/4227
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17314
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6008
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22353
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1878
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9084
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 298
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 232
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1954
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1752
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum

10-5838693-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5838693
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 5838693
    reference: chr 10
allele count: 1
allele frequency: 8.27787159365584e-6
allele num: 120804
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476832
  ensembl transcript: ENST00000609712
  gene symbol: GDI2
  hgvsc: ENST00000609712.1:c.265+33A>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369528
  ensembl transcript: ENST00000380181
  gene symbol: GDI2
  hgvsc: ENST00000380181.3:c.253+33A>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476707
  ensembl transcript: ENST00000608581
  gene symbol: GDI2
  hgvsc: ENST00000608581.1:c.187+33A>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000394177
  ensembl transcript: ENST00000418688
  gene symbol: GDI2
  hgvsc: ENST00000418688.1:c.145+33A>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369538
  ensembl transcript: ENST00000380191
  gene symbol: GDI2
  hgvsc: ENST00000380191.4:c.253+33A>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369475
  ensembl transcript: ENST00000380132
  gene symbol: GDI2
  hgvsc: ENST00000380132.4:c.265+33A>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000401733
  ensembl transcript: ENST00000456041
  gene symbol: GDI2
  hgvsc: ENST00000456041.1:c.253+33A>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369470
  ensembl transcript: ENST00000380127
  gene symbol: GDI2
  hgvsc: ENST00000380127.1:c.265+33A>G
  variant of: http://identifiers.org/hgnc/4227
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 22421
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1878
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9143
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6011
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17316
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 834
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
reference allele: T
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP

10-5838707-TA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5838707
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 5838706
    reference: chr 10
allele count: 1
allele frequency: 8.264736024331383e-6
allele num: 120996
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000394177
  ensembl transcript: ENST00000418688
  gene symbol: GDI2
  hgvsc: ENST00000418688.1:c.145+18delT
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369538
  ensembl transcript: ENST00000380191
  gene symbol: GDI2
  hgvsc: ENST00000380191.4:c.253+18delT
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369475
  ensembl transcript: ENST00000380132
  gene symbol: GDI2
  hgvsc: ENST00000380132.4:c.265+18delT
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369470
  ensembl transcript: ENST00000380127
  gene symbol: GDI2
  hgvsc: ENST00000380127.1:c.265+18delT
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369528
  ensembl transcript: ENST00000380181
  gene symbol: GDI2
  hgvsc: ENST00000380181.3:c.253+18delT
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000401733
  ensembl transcript: ENST00000456041
  gene symbol: GDI2
  hgvsc: ENST00000456041.1:c.253+18delT
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476707
  ensembl transcript: ENST00000608581
  gene symbol: GDI2
  hgvsc: ENST00000608581.1:c.187+18delT
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476832
  ensembl transcript: ENST00000609712
  gene symbol: GDI2
  hgvsc: ENST00000609712.1:c.265+18delT
  variant of: http://identifiers.org/hgnc/4227
canonical: true
consequence: intron
filter: VQSRTrancheINDEL96.00to97.00
genotype depth: GenotypeDepth
  all individuals: 9454
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22626
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1881
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17356
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 678
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6009
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42210
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 186
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 818
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: TA
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD

10-5838713-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5838713
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 5838713
    reference: chr 10
allele count: 1
allele frequency: 8.258320257659592e-6
allele num: 121090
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476707
  ensembl transcript: ENST00000608581
  gene symbol: GDI2
  hgvsc: ENST00000608581.1:c.187+13T>C
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476832
  ensembl transcript: ENST00000609712
  gene symbol: GDI2
  hgvsc: ENST00000609712.1:c.265+13T>C
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369528
  ensembl transcript: ENST00000380181
  gene symbol: GDI2
  hgvsc: ENST00000380181.3:c.253+13T>C
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000401733
  ensembl transcript: ENST00000456041
  gene symbol: GDI2
  hgvsc: ENST00000456041.1:c.253+13T>C
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369475
  ensembl transcript: ENST00000380132
  gene symbol: GDI2
  hgvsc: ENST00000380132.4:c.265+13T>C
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000394177
  ensembl transcript: ENST00000418688
  gene symbol: GDI2
  hgvsc: ENST00000418688.1:c.145+13T>C
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369538
  ensembl transcript: ENST00000380191
  gene symbol: GDI2
  hgvsc: ENST00000380191.4:c.253+13T>C
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369470
  ensembl transcript: ENST00000380127
  gene symbol: GDI2
  hgvsc: ENST00000380127.1:c.265+13T>C
  variant of: http://identifiers.org/hgnc/4227
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1878
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22672
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17375
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9513
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6011
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 143
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1724
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 315
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum

10-5838736-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5838736
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 5838736
    reference: chr 10
allele count: 8
allele frequency: 6.594566077552098e-5
allele num: 121312
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476832
  ensembl transcript: ENST00000609712
  gene symbol: GDI2
  hgvsc: ENST00000609712.1:c.255T>C
  hgvsp: ENST00000609712.1:c.255T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000394177
  ensembl transcript: ENST00000418688
  gene symbol: GDI2
  hgvsc: ENST00000418688.1:c.135T>C
  hgvsp: ENST00000418688.1:c.135T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369528
  ensembl transcript: ENST00000380181
  gene symbol: GDI2
  hgvsc: ENST00000380181.3:c.243T>C
  hgvsp: ENST00000380181.3:c.243T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000401733
  ensembl transcript: ENST00000456041
  gene symbol: GDI2
  hgvsc: ENST00000456041.1:c.243T>C
  hgvsp: ENST00000456041.1:c.243T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369475
  ensembl transcript: ENST00000380132
  gene symbol: GDI2
  hgvsc: ENST00000380132.4:c.255T>C
  hgvsp: ENST00000380132.4:c.255T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369470
  ensembl transcript: ENST00000380127
  gene symbol: GDI2
  hgvsc: ENST00000380127.1:c.255T>C
  hgvsp: ENST00000380127.1:c.255T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369538
  ensembl transcript: ENST00000380191
  gene symbol: GDI2
  hgvsc: ENST00000380191.4:c.243T>C
  hgvsp: ENST00000380191.4:c.243T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476707
  ensembl transcript: ENST00000608581
  gene symbol: GDI2
  hgvsc: ENST00000608581.1:c.177T>C
  hgvsp: ENST00000608581.1:c.177T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4227
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6010
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22765
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1875
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9625
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 678
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17387
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1946
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Leu81Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: Other
population: South Asian
reference allele: A
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum

10-5838740-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5838740
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 5838740
    reference: chr 10
allele count: 1
allele frequency: 8.24279991427488e-6
allele num: 121318
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476707
  ensembl transcript: ENST00000608581
  gene symbol: GDI2
  hgvsc: ENST00000608581.1:c.173T>C
  hgvsp: ENSP00000476707.1:p.Phe58Ser
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476832
  ensembl transcript: ENST00000609712
  gene symbol: GDI2
  hgvsc: ENST00000609712.1:c.251T>C
  hgvsp: ENSP00000476832.1:p.Phe84Ser
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000401733
  ensembl transcript: ENST00000456041
  gene symbol: GDI2
  hgvsc: ENST00000456041.1:c.239T>C
  hgvsp: ENSP00000401733.1:p.Phe80Ser
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369475
  ensembl transcript: ENST00000380132
  gene symbol: GDI2
  hgvsc: ENST00000380132.4:c.251T>C
  hgvsp: ENSP00000369475.4:p.Phe84Ser
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000394177
  ensembl transcript: ENST00000418688
  gene symbol: GDI2
  hgvsc: ENST00000418688.1:c.131T>C
  hgvsp: ENSP00000394177.1:p.Phe44Ser
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369528
  ensembl transcript: ENST00000380181
  gene symbol: GDI2
  hgvsc: ENST00000380181.3:c.239T>C
  hgvsp: ENSP00000369528.3:p.Phe80Ser
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369538
  ensembl transcript: ENST00000380191
  gene symbol: GDI2
  hgvsc: ENST00000380191.4:c.239T>C
  hgvsp: ENSP00000369538.4:p.Phe80Ser
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369470
  ensembl transcript: ENST00000380127
  gene symbol: GDI2
  hgvsc: ENST00000380127.1:c.251T>C
  hgvsp: ENSP00000369470.1:p.Phe84Ser
  variant of: http://identifiers.org/hgnc/4227
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 678
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22774
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6009
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9622
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17389
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1876
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1947
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10119
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Phe80Ser
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
population: African
reference allele: A
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum

10-5838748-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5838748
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 5838748
    reference: chr 10
allele count: 1
allele frequency: 8.241984669908513e-6
allele num: 121330
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476832
  ensembl transcript: ENST00000609712
  gene symbol: GDI2
  hgvsc: ENST00000609712.1:c.243T>A
  hgvsp: ENST00000609712.1:c.243T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000401733
  ensembl transcript: ENST00000456041
  gene symbol: GDI2
  hgvsc: ENST00000456041.1:c.231T>A
  hgvsp: ENST00000456041.1:c.231T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476707
  ensembl transcript: ENST00000608581
  gene symbol: GDI2
  hgvsc: ENST00000608581.1:c.165T>A
  hgvsp: ENST00000608581.1:c.165T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369470
  ensembl transcript: ENST00000380127
  gene symbol: GDI2
  hgvsc: ENST00000380127.1:c.243T>A
  hgvsp: ENST00000380127.1:c.243T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000394177
  ensembl transcript: ENST00000418688
  gene symbol: GDI2
  hgvsc: ENST00000418688.1:c.123T>A
  hgvsp: ENST00000418688.1:c.123T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369475
  ensembl transcript: ENST00000380132
  gene symbol: GDI2
  hgvsc: ENST00000380132.4:c.243T>A
  hgvsp: ENST00000380132.4:c.243T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369528
  ensembl transcript: ENST00000380181
  gene symbol: GDI2
  hgvsc: ENST00000380181.3:c.231T>A
  hgvsp: ENST00000380181.3:c.231T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369538
  ensembl transcript: ENST00000380191
  gene symbol: GDI2
  hgvsc: ENST00000380191.4:c.231T>A
  hgvsp: ENST00000380191.4:c.231T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4227
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6010
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9630
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 678
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22778
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1875
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17389
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10119
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42636
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ile77Ile
num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum

10-5838751-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5838751
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 5838751
    reference: chr 10
allele count: 1
allele frequency: 8.241848811525402e-6
allele num: 121332
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476707
  ensembl transcript: ENST00000608581
  gene symbol: GDI2
  hgvsc: ENST00000608581.1:c.162G>A
  hgvsp: ENST00000608581.1:c.162G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369528
  ensembl transcript: ENST00000380181
  gene symbol: GDI2
  hgvsc: ENST00000380181.3:c.228G>A
  hgvsp: ENST00000380181.3:c.228G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369475
  ensembl transcript: ENST00000380132
  gene symbol: GDI2
  hgvsc: ENST00000380132.4:c.240G>A
  hgvsp: ENST00000380132.4:c.240G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476832
  ensembl transcript: ENST00000609712
  gene symbol: GDI2
  hgvsc: ENST00000609712.1:c.240G>A
  hgvsp: ENST00000609712.1:c.240G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369470
  ensembl transcript: ENST00000380127
  gene symbol: GDI2
  hgvsc: ENST00000380127.1:c.240G>A
  hgvsp: ENST00000380127.1:c.240G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369538
  ensembl transcript: ENST00000380191
  gene symbol: GDI2
  hgvsc: ENST00000380191.4:c.228G>A
  hgvsp: ENST00000380191.4:c.228G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000394177
  ensembl transcript: ENST00000418688
  gene symbol: GDI2
  hgvsc: ENST00000418688.1:c.120G>A
  hgvsp: ENST00000418688.1:c.120G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000401733
  ensembl transcript: ENST00000456041
  gene symbol: GDI2
  hgvsc: ENST00000456041.1:c.228G>A
  hgvsp: ENST00000456041.1:c.228G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4227
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17387
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6010
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1875
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22784
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9628
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Leu76Leu
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP

10-5838766-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5838766
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 5838766
    reference: chr 10
allele count: 1
allele frequency: 8.242256400112095e-6
allele num: 121326
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369528
  ensembl transcript: ENST00000380181
  gene symbol: GDI2
  hgvsc: ENST00000380181.3:c.213C>G
  hgvsp: ENSP00000369528.3:p.Asp71Glu
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369470
  ensembl transcript: ENST00000380127
  gene symbol: GDI2
  hgvsc: ENST00000380127.1:c.225C>G
  hgvsp: ENSP00000369470.1:p.Asp75Glu
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369475
  ensembl transcript: ENST00000380132
  gene symbol: GDI2
  hgvsc: ENST00000380132.4:c.225C>G
  hgvsp: ENSP00000369475.4:p.Asp75Glu
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476707
  ensembl transcript: ENST00000608581
  gene symbol: GDI2
  hgvsc: ENST00000608581.1:c.147C>G
  hgvsp: ENSP00000476707.1:p.Asp49Glu
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476832
  ensembl transcript: ENST00000609712
  gene symbol: GDI2
  hgvsc: ENST00000609712.1:c.225C>G
  hgvsp: ENSP00000476832.1:p.Asp75Glu
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000401733
  ensembl transcript: ENST00000456041
  gene symbol: GDI2
  hgvsc: ENST00000456041.1:c.213C>G
  hgvsp: ENSP00000401733.1:p.Asp71Glu
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000394177
  ensembl transcript: ENST00000418688
  gene symbol: GDI2
  hgvsc: ENST00000418688.1:c.105C>G
  hgvsp: ENSP00000394177.1:p.Asp35Glu
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369538
  ensembl transcript: ENST00000380191
  gene symbol: GDI2
  hgvsc: ENST00000380191.4:c.213C>G
  hgvsp: ENSP00000369538.4:p.Asp71Glu
  variant of: http://identifiers.org/hgnc/4227
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9615
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1875
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22795
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17389
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6009
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1943
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Asp71Glu
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: G
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum

10-5838766-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5838766
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 5838766
    reference: chr 10
allele count: 1
allele frequency: 8.242256400112095e-6
allele num: 121326
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369528
  ensembl transcript: ENST00000380181
  gene symbol: GDI2
  hgvsc: ENST00000380181.3:c.213C>A
  hgvsp: ENSP00000369528.3:p.Asp71Glu
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476707
  ensembl transcript: ENST00000608581
  gene symbol: GDI2
  hgvsc: ENST00000608581.1:c.147C>A
  hgvsp: ENSP00000476707.1:p.Asp49Glu
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476832
  ensembl transcript: ENST00000609712
  gene symbol: GDI2
  hgvsc: ENST00000609712.1:c.225C>A
  hgvsp: ENSP00000476832.1:p.Asp75Glu
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369470
  ensembl transcript: ENST00000380127
  gene symbol: GDI2
  hgvsc: ENST00000380127.1:c.225C>A
  hgvsp: ENSP00000369470.1:p.Asp75Glu
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369475
  ensembl transcript: ENST00000380132
  gene symbol: GDI2
  hgvsc: ENST00000380132.4:c.225C>A
  hgvsp: ENSP00000369475.4:p.Asp75Glu
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000394177
  ensembl transcript: ENST00000418688
  gene symbol: GDI2
  hgvsc: ENST00000418688.1:c.105C>A
  hgvsp: ENSP00000394177.1:p.Asp35Glu
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000401733
  ensembl transcript: ENST00000456041
  gene symbol: GDI2
  hgvsc: ENST00000456041.1:c.213C>A
  hgvsp: ENSP00000401733.1:p.Asp71Glu
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369538
  ensembl transcript: ENST00000380191
  gene symbol: GDI2
  hgvsc: ENST00000380191.4:c.213C>A
  hgvsp: ENSP00000369538.4:p.Asp71Glu
  variant of: http://identifiers.org/hgnc/4227
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6009
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22795
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1875
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9615
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17389
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 362
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Asp71Glu
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD

10-5838770-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5838770
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 5838770
    reference: chr 10
allele count: 1
allele frequency: 8.242528148233626e-6
allele num: 121322
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369475
  ensembl transcript: ENST00000380132
  gene symbol: GDI2
  hgvsc: ENST00000380132.4:c.221G>A
  hgvsp: ENSP00000369475.4:p.Arg74Lys
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000401733
  ensembl transcript: ENST00000456041
  gene symbol: GDI2
  hgvsc: ENST00000456041.1:c.209G>A
  hgvsp: ENSP00000401733.1:p.Arg70Lys
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476832
  ensembl transcript: ENST00000609712
  gene symbol: GDI2
  hgvsc: ENST00000609712.1:c.221G>A
  hgvsp: ENSP00000476832.1:p.Arg74Lys
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000394177
  ensembl transcript: ENST00000418688
  gene symbol: GDI2
  hgvsc: ENST00000418688.1:c.101G>A
  hgvsp: ENSP00000394177.1:p.Arg34Lys
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369528
  ensembl transcript: ENST00000380181
  gene symbol: GDI2
  hgvsc: ENST00000380181.3:c.209G>A
  hgvsp: ENSP00000369528.3:p.Arg70Lys
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369538
  ensembl transcript: ENST00000380191
  gene symbol: GDI2
  hgvsc: ENST00000380191.4:c.209G>A
  hgvsp: ENSP00000369538.4:p.Arg70Lys
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369470
  ensembl transcript: ENST00000380127
  gene symbol: GDI2
  hgvsc: ENST00000380127.1:c.221G>A
  hgvsp: ENSP00000369470.1:p.Arg74Lys
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476707
  ensembl transcript: ENST00000608581
  gene symbol: GDI2
  hgvsc: ENST00000608581.1:c.143G>A
  hgvsp: ENSP00000476707.1:p.Arg48Lys
  variant of: http://identifiers.org/hgnc/4227
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9611
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22799
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 678
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1875
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17386
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6009
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10126
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Arg70Lys
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: Other
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

10-5838775-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5838775
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 5838775
    reference: chr 10
allele count: 1
allele frequency: 8.242528148233626e-6
allele num: 121322
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000394177
  ensembl transcript: ENST00000418688
  gene symbol: GDI2
  hgvsc: ENST00000418688.1:c.96A>G
  hgvsp: ENST00000418688.1:c.96A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369470
  ensembl transcript: ENST00000380127
  gene symbol: GDI2
  hgvsc: ENST00000380127.1:c.216A>G
  hgvsp: ENST00000380127.1:c.216A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476707
  ensembl transcript: ENST00000608581
  gene symbol: GDI2
  hgvsc: ENST00000608581.1:c.138A>G
  hgvsp: ENST00000608581.1:c.138A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476832
  ensembl transcript: ENST00000609712
  gene symbol: GDI2
  hgvsc: ENST00000609712.1:c.216A>G
  hgvsp: ENST00000609712.1:c.216A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369538
  ensembl transcript: ENST00000380191
  gene symbol: GDI2
  hgvsc: ENST00000380191.4:c.204A>G
  hgvsp: ENST00000380191.4:c.204A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369528
  ensembl transcript: ENST00000380181
  gene symbol: GDI2
  hgvsc: ENST00000380181.3:c.204A>G
  hgvsp: ENST00000380181.3:c.204A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369475
  ensembl transcript: ENST00000380132
  gene symbol: GDI2
  hgvsc: ENST00000380132.4:c.216A>G
  hgvsp: ENST00000380132.4:c.216A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000401733
  ensembl transcript: ENST00000456041
  gene symbol: GDI2
  hgvsc: ENST00000456041.1:c.204A>G
  hgvsp: ENST00000456041.1:c.204A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4227
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17389
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22802
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1875
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6008
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9613
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1943
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Arg68Arg
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: Latino
population: South Asian
reference allele: T
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum

10-5838789-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5838789
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 5838789
    reference: chr 10
allele count: 1
allele frequency: 8.244430886935875e-6
allele num: 121294
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369528
  ensembl transcript: ENST00000380181
  gene symbol: GDI2
  hgvsc: ENST00000380181.3:c.190G>A
  hgvsp: ENSP00000369528.3:p.Glu64Lys
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476707
  ensembl transcript: ENST00000608581
  gene symbol: GDI2
  hgvsc: ENST00000608581.1:c.124G>A
  hgvsp: ENSP00000476707.1:p.Glu42Lys
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476832
  ensembl transcript: ENST00000609712
  gene symbol: GDI2
  hgvsc: ENST00000609712.1:c.202G>A
  hgvsp: ENSP00000476832.1:p.Glu68Lys
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369475
  ensembl transcript: ENST00000380132
  gene symbol: GDI2
  hgvsc: ENST00000380132.4:c.202G>A
  hgvsp: ENSP00000369475.4:p.Glu68Lys
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369470
  ensembl transcript: ENST00000380127
  gene symbol: GDI2
  hgvsc: ENST00000380127.1:c.202G>A
  hgvsp: ENSP00000369470.1:p.Glu68Lys
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000394177
  ensembl transcript: ENST00000418688
  gene symbol: GDI2
  hgvsc: ENST00000418688.1:c.82G>A
  hgvsp: ENSP00000394177.1:p.Glu28Lys
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000401733
  ensembl transcript: ENST00000456041
  gene symbol: GDI2
  hgvsc: ENST00000456041.1:c.190G>A
  hgvsp: ENSP00000401733.1:p.Glu64Lys
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369538
  ensembl transcript: ENST00000380191
  gene symbol: GDI2
  hgvsc: ENST00000380191.4:c.190G>A
  hgvsp: ENSP00000369538.4:p.Glu64Lys
  variant of: http://identifiers.org/hgnc/4227
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9570
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1875
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22810
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17391
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6010
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42620
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Glu64Lys
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum

10-5838790-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5838790
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 5838790
    reference: chr 10
allele count: 1
allele frequency: 8.244702778464837e-6
allele num: 121290
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369528
  ensembl transcript: ENST00000380181
  gene symbol: GDI2
  hgvsc: ENST00000380181.3:c.189C>A
  hgvsp: ENST00000380181.3:c.189C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476707
  ensembl transcript: ENST00000608581
  gene symbol: GDI2
  hgvsc: ENST00000608581.1:c.123C>A
  hgvsp: ENST00000608581.1:c.123C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000401733
  ensembl transcript: ENST00000456041
  gene symbol: GDI2
  hgvsc: ENST00000456041.1:c.189C>A
  hgvsp: ENST00000456041.1:c.189C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476832
  ensembl transcript: ENST00000609712
  gene symbol: GDI2
  hgvsc: ENST00000609712.1:c.201C>A
  hgvsp: ENST00000609712.1:c.201C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000394177
  ensembl transcript: ENST00000418688
  gene symbol: GDI2
  hgvsc: ENST00000418688.1:c.81C>A
  hgvsp: ENST00000418688.1:c.81C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369475
  ensembl transcript: ENST00000380132
  gene symbol: GDI2
  hgvsc: ENST00000380132.4:c.201C>A
  hgvsp: ENST00000380132.4:c.201C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369538
  ensembl transcript: ENST00000380191
  gene symbol: GDI2
  hgvsc: ENST00000380191.4:c.189C>A
  hgvsp: ENST00000380191.4:c.189C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369470
  ensembl transcript: ENST00000380127
  gene symbol: GDI2
  hgvsc: ENST00000380127.1:c.201C>A
  hgvsp: ENST00000380127.1:c.201C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4227
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17395
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6011
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9566
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22807
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1875
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2700
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1939
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Pro63Pro
num of homozygotes: 0
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum

10-5838800-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5838800
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 5838800
    reference: chr 10
allele count: 3
allele frequency: 2.474390062849507e-5
allele num: 121242
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369538
  ensembl transcript: ENST00000380191
  gene symbol: GDI2
  hgvsc: ENST00000380191.4:c.179G>A
  hgvsp: ENSP00000369538.4:p.Gly60Glu
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476707
  ensembl transcript: ENST00000608581
  gene symbol: GDI2
  hgvsc: ENST00000608581.1:c.113G>A
  hgvsp: ENSP00000476707.1:p.Gly38Glu
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000401733
  ensembl transcript: ENST00000456041
  gene symbol: GDI2
  hgvsc: ENST00000456041.1:c.179G>A
  hgvsp: ENSP00000401733.1:p.Gly60Glu
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476832
  ensembl transcript: ENST00000609712
  gene symbol: GDI2
  hgvsc: ENST00000609712.1:c.191G>A
  hgvsp: ENSP00000476832.1:p.Gly64Glu
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369475
  ensembl transcript: ENST00000380132
  gene symbol: GDI2
  hgvsc: ENST00000380132.4:c.191G>A
  hgvsp: ENSP00000369475.4:p.Gly64Glu
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369470
  ensembl transcript: ENST00000380127
  gene symbol: GDI2
  hgvsc: ENST00000380127.1:c.191G>A
  hgvsp: ENSP00000369470.1:p.Gly64Glu
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000394177
  ensembl transcript: ENST00000418688
  gene symbol: GDI2
  hgvsc: ENST00000418688.1:c.71G>A
  hgvsp: ENSP00000394177.1:p.Gly24Glu
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369528
  ensembl transcript: ENST00000380181
  gene symbol: GDI2
  hgvsc: ENST00000380181.3:c.179G>A
  hgvsp: ENSP00000369528.3:p.Gly60Glu
  variant of: http://identifiers.org/hgnc/4227
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6013
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22791
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17386
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9533
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1873
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 814
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1937
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Gly60Glu
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum

10-5838804-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5838804
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 5838804
    reference: chr 10
allele count: 2
allele frequency: 1.65000165000165e-5
allele num: 121212
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000401733
  ensembl transcript: ENST00000456041
  gene symbol: GDI2
  hgvsc: ENST00000456041.1:c.175C>A
  hgvsp: ENSP00000401733.1:p.Pro59Thr
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369528
  ensembl transcript: ENST00000380181
  gene symbol: GDI2
  hgvsc: ENST00000380181.3:c.175C>A
  hgvsp: ENSP00000369528.3:p.Pro59Thr
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369475
  ensembl transcript: ENST00000380132
  gene symbol: GDI2
  hgvsc: ENST00000380132.4:c.187C>A
  hgvsp: ENSP00000369475.4:p.Pro63Thr
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476707
  ensembl transcript: ENST00000608581
  gene symbol: GDI2
  hgvsc: ENST00000608581.1:c.109C>A
  hgvsp: ENSP00000476707.1:p.Pro37Thr
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476832
  ensembl transcript: ENST00000609712
  gene symbol: GDI2
  hgvsc: ENST00000609712.1:c.187C>A
  hgvsp: ENSP00000476832.1:p.Pro63Thr
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369470
  ensembl transcript: ENST00000380127
  gene symbol: GDI2
  hgvsc: ENST00000380127.1:c.187C>A
  hgvsp: ENSP00000369470.1:p.Pro63Thr
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000394177
  ensembl transcript: ENST00000418688
  gene symbol: GDI2
  hgvsc: ENST00000418688.1:c.67C>A
  hgvsp: ENSP00000394177.1:p.Pro23Thr
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369538
  ensembl transcript: ENST00000380191
  gene symbol: GDI2
  hgvsc: ENST00000380191.4:c.175C>A
  hgvsp: ENSP00000369538.4:p.Pro59Thr
  variant of: http://identifiers.org/hgnc/4227
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1872
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17384
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9522
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6007
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22783
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42555
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 811
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Pro59Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: Other
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/10-5838834-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5838834
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 5838834
    reference: chr 10
allele count: 1
allele frequency: 8.311308366163002e-6
allele num: 120318
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369528
  ensembl transcript: ENST00000380181
  gene symbol: GDI2
  hgvsc: ENST00000380181.3:c.154-9T>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000401733
  ensembl transcript: ENST00000456041
  gene symbol: GDI2
  hgvsc: ENST00000456041.1:c.154-9T>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000394177
  ensembl transcript: ENST00000418688
  gene symbol: GDI2
  hgvsc: ENST00000418688.1:c.46-9T>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369475
  ensembl transcript: ENST00000380132
  gene symbol: GDI2
  hgvsc: ENST00000380132.4:c.166-9T>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369470
  ensembl transcript: ENST00000380127
  gene symbol: GDI2
  hgvsc: ENST00000380127.1:c.166-9T>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476832
  ensembl transcript: ENST00000609712
  gene symbol: GDI2
  hgvsc: ENST00000609712.1:c.166-9T>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476707
  ensembl transcript: ENST00000608581
  gene symbol: GDI2
  hgvsc: ENST00000608581.1:c.88-9T>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369538
  ensembl transcript: ENST00000380191
  gene symbol: GDI2
  hgvsc: ENST00000380191.4:c.154-9T>G
  variant of: http://identifiers.org/hgnc/4227
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1120
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22303
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5987
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17215
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8418
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1867
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1546
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41153
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: East Asian
reference allele: A
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: DP

http://identifiers.org/exac.variant/10-5838839-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5838839
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 5838839
    reference: chr 10
allele count: 1
allele frequency: 8.346548702111677e-6
allele num: 119810
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369475
  ensembl transcript: ENST00000380132
  gene symbol: GDI2
  hgvsc: ENST00000380132.4:c.166-14T>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000401733
  ensembl transcript: ENST00000456041
  gene symbol: GDI2
  hgvsc: ENST00000456041.1:c.154-14T>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369528
  ensembl transcript: ENST00000380181
  gene symbol: GDI2
  hgvsc: ENST00000380181.3:c.154-14T>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369470
  ensembl transcript: ENST00000380127
  gene symbol: GDI2
  hgvsc: ENST00000380127.1:c.166-14T>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476707
  ensembl transcript: ENST00000608581
  gene symbol: GDI2
  hgvsc: ENST00000608581.1:c.88-14T>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476832
  ensembl transcript: ENST00000609712
  gene symbol: GDI2
  hgvsc: ENST00000609712.1:c.166-14T>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000394177
  ensembl transcript: ENST00000418688
  gene symbol: GDI2
  hgvsc: ENST00000418688.1:c.46-14T>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369538
  ensembl transcript: ENST00000380191
  gene symbol: GDI2
  hgvsc: ENST00000380191.4:c.154-14T>G
  variant of: http://identifiers.org/hgnc/4227
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5971
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17047
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 733
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21858
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1829
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7846
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1861
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 770
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 292
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2483
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9611
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2679
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: A
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD

10-5838842-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5838842
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 5838842
    reference: chr 10
allele count: 1
allele frequency: 8.400114241553686e-6
allele num: 119046
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369528
  ensembl transcript: ENST00000380181
  gene symbol: GDI2
  hgvsc: ENST00000380181.3:c.154-17T>C
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000401733
  ensembl transcript: ENST00000456041
  gene symbol: GDI2
  hgvsc: ENST00000456041.1:c.154-17T>C
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476832
  ensembl transcript: ENST00000609712
  gene symbol: GDI2
  hgvsc: ENST00000609712.1:c.166-17T>C
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000394177
  ensembl transcript: ENST00000418688
  gene symbol: GDI2
  hgvsc: ENST00000418688.1:c.46-17T>C
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369470
  ensembl transcript: ENST00000380127
  gene symbol: GDI2
  hgvsc: ENST00000380127.1:c.166-17T>C
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369538
  ensembl transcript: ENST00000380191
  gene symbol: GDI2
  hgvsc: ENST00000380191.4:c.154-17T>C
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476707
  ensembl transcript: ENST00000608581
  gene symbol: GDI2
  hgvsc: ENST00000608581.1:c.88-17T>C
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369475
  ensembl transcript: ENST00000380132
  gene symbol: GDI2
  hgvsc: ENST00000380132.4:c.166-17T>C
  variant of: http://identifiers.org/hgnc/4227
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1084
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3051
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1859
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 969
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20916
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5931
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16730
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7144
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2679
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 524
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4035
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: South Asian
reference allele: A
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/10-5838844-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5838844
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 5838844
    reference: chr 10
allele count: 4
allele frequency: 3.376325207644e-5
allele num: 118472
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476832
  ensembl transcript: ENST00000609712
  gene symbol: GDI2
  hgvsc: ENST00000609712.1:c.166-19T>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000401733
  ensembl transcript: ENST00000456041
  gene symbol: GDI2
  hgvsc: ENST00000456041.1:c.154-19T>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000394177
  ensembl transcript: ENST00000418688
  gene symbol: GDI2
  hgvsc: ENST00000418688.1:c.46-19T>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369475
  ensembl transcript: ENST00000380132
  gene symbol: GDI2
  hgvsc: ENST00000380132.4:c.166-19T>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369538
  ensembl transcript: ENST00000380191
  gene symbol: GDI2
  hgvsc: ENST00000380191.4:c.154-19T>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369470
  ensembl transcript: ENST00000380127
  gene symbol: GDI2
  hgvsc: ENST00000380127.1:c.166-19T>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476707
  ensembl transcript: ENST00000608581
  gene symbol: GDI2
  hgvsc: ENST00000608581.1:c.88-19T>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369528
  ensembl transcript: ENST00000380181
  gene symbol: GDI2
  hgvsc: ENST00000380181.3:c.154-19T>G
  variant of: http://identifiers.org/hgnc/4227
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 6693
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 600
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1303
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1341
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4205
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16309
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5878
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1850
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20084
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 347
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1562
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 289
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 562
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
reference allele: A
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum

10-5838845-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5838845
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 5838845
    reference: chr 10
allele count: 283
allele frequency: 2.38854847149778e-3
allele num: 118482
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476707
  ensembl transcript: ENST00000608581
  gene symbol: GDI2
  hgvsc: ENST00000608581.1:c.88-20A>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369538
  ensembl transcript: ENST00000380191
  gene symbol: GDI2
  hgvsc: ENST00000380191.4:c.154-20A>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000394177
  ensembl transcript: ENST00000418688
  gene symbol: GDI2
  hgvsc: ENST00000418688.1:c.46-20A>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369475
  ensembl transcript: ENST00000380132
  gene symbol: GDI2
  hgvsc: ENST00000380132.4:c.166-20A>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369470
  ensembl transcript: ENST00000380127
  gene symbol: GDI2
  hgvsc: ENST00000380127.1:c.166-20A>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369528
  ensembl transcript: ENST00000380181
  gene symbol: GDI2
  hgvsc: ENST00000380181.3:c.154-20A>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476832
  ensembl transcript: ENST00000609712
  gene symbol: GDI2
  hgvsc: ENST00000609712.1:c.166-20A>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000401733
  ensembl transcript: ENST00000456041
  gene symbol: GDI2
  hgvsc: ENST00000456041.1:c.154-20A>G
  variant of: http://identifiers.org/hgnc/4227
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5862
  bin: 3.75e1
  variant carriers: 37
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 6.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 1346
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 6.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 16294
  bin: 3.25e1
  variant carriers: 41
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 5.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 1307
  bin: 1.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 6673
  bin: 2.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 4210
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 9.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 20078
  bin: 2.75e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 1854
  bin: 4.25e1
  variant carriers: 39
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 5.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 686
  bin: 4.75e1
  variant carriers: 34
genotype quality: GenotypeQuality
  all individuals: 720
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5408
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
population: Latino
population: East Asian
population: European (Finnish)
reference allele: T
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: DP

10-5838849-CATA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5838849
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 5838846
    reference: chr 10
allele count: 1
allele frequency: 8.55431993156544e-6
allele num: 116900
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369528
  ensembl transcript: ENST00000380181
  gene symbol: GDI2
  hgvsc: ENST00000380181.3:c.154-27_154-25delTAT
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000401733
  ensembl transcript: ENST00000456041
  gene symbol: GDI2
  hgvsc: ENST00000456041.1:c.154-27_154-25delTAT
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000394177
  ensembl transcript: ENST00000418688
  gene symbol: GDI2
  hgvsc: ENST00000418688.1:c.46-27_46-25delTAT
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476707
  ensembl transcript: ENST00000608581
  gene symbol: GDI2
  hgvsc: ENST00000608581.1:c.88-27_88-25delTAT
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476832
  ensembl transcript: ENST00000609712
  gene symbol: GDI2
  hgvsc: ENST00000609712.1:c.166-27_166-25delTAT
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369470
  ensembl transcript: ENST00000380127
  gene symbol: GDI2
  hgvsc: ENST00000380127.1:c.166-27_166-25delTAT
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369538
  ensembl transcript: ENST00000380191
  gene symbol: GDI2
  hgvsc: ENST00000380191.4:c.154-27_154-25delTAT
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369475
  ensembl transcript: ENST00000380132
  gene symbol: GDI2
  hgvsc: ENST00000380132.4:c.166-27_166-25delTAT
  variant of: http://identifiers.org/hgnc/4227
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8649
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17402
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14196
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2422
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5712
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1978
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5473
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1775
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 259
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1485
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1316
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 465
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
reference allele: CATA
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum

10-5838850-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5838850
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 5838850
    reference: chr 10
allele count: 1
allele frequency: 8.574858514834504e-6
allele num: 116620
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369470
  ensembl transcript: ENST00000380127
  gene symbol: GDI2
  hgvsc: ENST00000380127.1:c.166-25T>C
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369475
  ensembl transcript: ENST00000380132
  gene symbol: GDI2
  hgvsc: ENST00000380132.4:c.166-25T>C
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369538
  ensembl transcript: ENST00000380191
  gene symbol: GDI2
  hgvsc: ENST00000380191.4:c.154-25T>C
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000394177
  ensembl transcript: ENST00000418688
  gene symbol: GDI2
  hgvsc: ENST00000418688.1:c.46-25T>C
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476832
  ensembl transcript: ENST00000609712
  gene symbol: GDI2
  hgvsc: ENST00000609712.1:c.166-25T>C
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000401733
  ensembl transcript: ENST00000456041
  gene symbol: GDI2
  hgvsc: ENST00000456041.1:c.154-25T>C
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369528
  ensembl transcript: ENST00000380181
  gene symbol: GDI2
  hgvsc: ENST00000380181.3:c.154-25T>C
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476707
  ensembl transcript: ENST00000608581
  gene symbol: GDI2
  hgvsc: ENST00000608581.1:c.88-25T>C
  variant of: http://identifiers.org/hgnc/4227
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2103
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5522
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9909
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16705
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5250
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2913
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1733
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13447
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1570
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11248
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1697
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 298
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: A
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: QD
site quality: ReadPosRankSum

10-5838851-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5838851
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 5838851
    reference: chr 10
allele count: 1
allele frequency: 8.600079120727911e-6
allele num: 116278
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369538
  ensembl transcript: ENST00000380191
  gene symbol: GDI2
  hgvsc: ENST00000380191.4:c.154-26A>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369528
  ensembl transcript: ENST00000380181
  gene symbol: GDI2
  hgvsc: ENST00000380181.3:c.154-26A>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476707
  ensembl transcript: ENST00000608581
  gene symbol: GDI2
  hgvsc: ENST00000608581.1:c.88-26A>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000394177
  ensembl transcript: ENST00000418688
  gene symbol: GDI2
  hgvsc: ENST00000418688.1:c.46-26A>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000401733
  ensembl transcript: ENST00000456041
  gene symbol: GDI2
  hgvsc: ENST00000456041.1:c.154-26A>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476832
  ensembl transcript: ENST00000609712
  gene symbol: GDI2
  hgvsc: ENST00000609712.1:c.166-26A>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369475
  ensembl transcript: ENST00000380132
  gene symbol: GDI2
  hgvsc: ENST00000380132.4:c.166-26A>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369470
  ensembl transcript: ENST00000380127
  gene symbol: GDI2
  hgvsc: ENST00000380127.1:c.166-26A>G
  variant of: http://identifiers.org/hgnc/4227
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5337
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16122
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10958
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2219
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5017
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12797
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1693
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3399
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1825
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 369
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1593
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 318
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12224
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7781
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
population: African
population: Latino
reference allele: T
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum

http://identifiers.org/exac.variant/10-5838852-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5838852
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 5838852
    reference: chr 10
allele count: 1
allele frequency: 8.668065114505139e-6
allele num: 115366
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369538
  ensembl transcript: ENST00000380191
  gene symbol: GDI2
  hgvsc: ENST00000380191.4:c.154-27T>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369475
  ensembl transcript: ENST00000380132
  gene symbol: GDI2
  hgvsc: ENST00000380132.4:c.166-27T>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000394177
  ensembl transcript: ENST00000418688
  gene symbol: GDI2
  hgvsc: ENST00000418688.1:c.46-27T>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369528
  ensembl transcript: ENST00000380181
  gene symbol: GDI2
  hgvsc: ENST00000380181.3:c.154-27T>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000401733
  ensembl transcript: ENST00000456041
  gene symbol: GDI2
  hgvsc: ENST00000456041.1:c.154-27T>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476832
  ensembl transcript: ENST00000609712
  gene symbol: GDI2
  hgvsc: ENST00000609712.1:c.166-27T>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476707
  ensembl transcript: ENST00000608581
  gene symbol: GDI2
  hgvsc: ENST00000608581.1:c.88-27T>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369470
  ensembl transcript: ENST00000380127
  gene symbol: GDI2
  hgvsc: ENST00000380127.1:c.166-27T>G
  variant of: http://identifiers.org/hgnc/4227
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5192
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4924
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14044
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14651
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10671
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2490
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4031
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1429
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24463
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 604
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 318
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2633
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 520
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2672
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
population: Latino
population: South Asian
reference allele: A
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: QD

10-5838854-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5838854
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 5838854
    reference: chr 10
allele count: 2
allele frequency: 1.733853489380147e-5
allele num: 115350
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000394177
  ensembl transcript: ENST00000418688
  gene symbol: GDI2
  hgvsc: ENST00000418688.1:c.46-29A>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369475
  ensembl transcript: ENST00000380132
  gene symbol: GDI2
  hgvsc: ENST00000380132.4:c.166-29A>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476832
  ensembl transcript: ENST00000609712
  gene symbol: GDI2
  hgvsc: ENST00000609712.1:c.166-29A>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369470
  ensembl transcript: ENST00000380127
  gene symbol: GDI2
  hgvsc: ENST00000380127.1:c.166-29A>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369538
  ensembl transcript: ENST00000380191
  gene symbol: GDI2
  hgvsc: ENST00000380191.4:c.154-29A>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369528
  ensembl transcript: ENST00000380181
  gene symbol: GDI2
  hgvsc: ENST00000380181.3:c.154-29A>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000401733
  ensembl transcript: ENST00000456041
  gene symbol: GDI2
  hgvsc: ENST00000456041.1:c.154-29A>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476707
  ensembl transcript: ENST00000608581
  gene symbol: GDI2
  hgvsc: ENST00000608581.1:c.88-29A>G
  variant of: http://identifiers.org/hgnc/4227
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14689
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14061
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2500
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4965
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5186
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3987
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10624
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1420
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 606
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15213
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 687
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: QD

10-5838860-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5838860
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 5838860
    reference: chr 10
allele count: 1
allele frequency: 8.898222135217384e-6
allele num: 112382
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369470
  ensembl transcript: ENST00000380127
  gene symbol: GDI2
  hgvsc: ENST00000380127.1:c.166-35G>A
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369475
  ensembl transcript: ENST00000380132
  gene symbol: GDI2
  hgvsc: ENST00000380132.4:c.166-35G>A
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000394177
  ensembl transcript: ENST00000418688
  gene symbol: GDI2
  hgvsc: ENST00000418688.1:c.46-35G>A
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369538
  ensembl transcript: ENST00000380191
  gene symbol: GDI2
  hgvsc: ENST00000380191.4:c.154-35G>A
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476707
  ensembl transcript: ENST00000608581
  gene symbol: GDI2
  hgvsc: ENST00000608581.1:c.88-35G>A
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000401733
  ensembl transcript: ENST00000456041
  gene symbol: GDI2
  hgvsc: ENST00000456041.1:c.154-35G>A
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476832
  ensembl transcript: ENST00000609712
  gene symbol: GDI2
  hgvsc: ENST00000609712.1:c.166-35G>A
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369528
  ensembl transcript: ENST00000380181
  gene symbol: GDI2
  hgvsc: ENST00000380181.3:c.154-35G>A
  variant of: http://identifiers.org/hgnc/4227
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6808
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2113
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9322
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 828
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 943
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4745
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17376
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3248
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12603
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 572
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 249
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19568
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18380
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2578
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3717
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: Other
reference allele: C
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff

10-5838861-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5838861
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 5838861
    reference: chr 10
allele count: 2
allele frequency: 1.784216818027727e-5
allele num: 112094
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476832
  ensembl transcript: ENST00000609712
  gene symbol: GDI2
  hgvsc: ENST00000609712.1:c.166-36T>A
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369475
  ensembl transcript: ENST00000380132
  gene symbol: GDI2
  hgvsc: ENST00000380132.4:c.166-36T>A
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000394177
  ensembl transcript: ENST00000418688
  gene symbol: GDI2
  hgvsc: ENST00000418688.1:c.46-36T>A
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369538
  ensembl transcript: ENST00000380191
  gene symbol: GDI2
  hgvsc: ENST00000380191.4:c.154-36T>A
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000401733
  ensembl transcript: ENST00000456041
  gene symbol: GDI2
  hgvsc: ENST00000456041.1:c.154-36T>A
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476707
  ensembl transcript: ENST00000608581
  gene symbol: GDI2
  hgvsc: ENST00000608581.1:c.88-36T>A
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369528
  ensembl transcript: ENST00000380181
  gene symbol: GDI2
  hgvsc: ENST00000380181.3:c.154-36T>A
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369470
  ensembl transcript: ENST00000380127
  gene symbol: GDI2
  hgvsc: ENST00000380127.1:c.166-36T>A
  variant of: http://identifiers.org/hgnc/4227
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3414
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1035
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17545
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2037
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4639
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 822
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11954
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10173
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6364
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4578
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2451
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18621
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 410
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 572
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3882
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 900
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: Other
population: East Asian
reference allele: A
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: QD

10-5838865-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5838865
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 5838865
    reference: chr 10
allele count: 1
allele frequency: 9.462349312087206e-6
allele num: 105682
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000401733
  ensembl transcript: ENST00000456041
  gene symbol: GDI2
  hgvsc: ENST00000456041.1:c.154-40A>T
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369470
  ensembl transcript: ENST00000380127
  gene symbol: GDI2
  hgvsc: ENST00000380127.1:c.166-40A>T
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369538
  ensembl transcript: ENST00000380191
  gene symbol: GDI2
  hgvsc: ENST00000380191.4:c.154-40A>T
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369475
  ensembl transcript: ENST00000380132
  gene symbol: GDI2
  hgvsc: ENST00000380132.4:c.166-40A>T
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476832
  ensembl transcript: ENST00000609712
  gene symbol: GDI2
  hgvsc: ENST00000609712.1:c.166-40A>T
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000394177
  ensembl transcript: ENST00000418688
  gene symbol: GDI2
  hgvsc: ENST00000418688.1:c.46-40A>T
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369528
  ensembl transcript: ENST00000380181
  gene symbol: GDI2
  hgvsc: ENST00000380181.3:c.154-40A>T
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476707
  ensembl transcript: ENST00000608581
  gene symbol: GDI2
  hgvsc: ENST00000608581.1:c.88-40A>T
  variant of: http://identifiers.org/hgnc/4227
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15264
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5859
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1440
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16223
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7589
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4422
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1659
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4681
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 482
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4418
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1321
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 306
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3872
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 686
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2583
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP

10-5838867-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5838867
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 5838867
    reference: chr 10
allele count: 1
allele frequency: 9.602458229306703e-6
allele num: 104140
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369475
  ensembl transcript: ENST00000380132
  gene symbol: GDI2
  hgvsc: ENST00000380132.4:c.166-42A>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369538
  ensembl transcript: ENST00000380191
  gene symbol: GDI2
  hgvsc: ENST00000380191.4:c.154-42A>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369470
  ensembl transcript: ENST00000380127
  gene symbol: GDI2
  hgvsc: ENST00000380127.1:c.166-42A>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476832
  ensembl transcript: ENST00000609712
  gene symbol: GDI2
  hgvsc: ENST00000609712.1:c.166-42A>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000401733
  ensembl transcript: ENST00000456041
  gene symbol: GDI2
  hgvsc: ENST00000456041.1:c.154-42A>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000394177
  ensembl transcript: ENST00000418688
  gene symbol: GDI2
  hgvsc: ENST00000418688.1:c.46-42A>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476707
  ensembl transcript: ENST00000608581
  gene symbol: GDI2
  hgvsc: ENST00000608581.1:c.88-42A>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369528
  ensembl transcript: ENST00000380181
  gene symbol: GDI2
  hgvsc: ENST00000380181.3:c.154-42A>G
  variant of: http://identifiers.org/hgnc/4227
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15820
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6569
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1603
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1470
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4040
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14954
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5666
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7009
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1128
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4292
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 435
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 559
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6562
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1634
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 248
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum

10-5838869-A-AT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5838869
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 5838870
    reference: chr 10
allele count: 1
allele frequency: 9.929303360076257e-6
allele num: 100712
alternate allele: AT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369528
  ensembl transcript: ENST00000380181
  gene symbol: GDI2
  hgvsc: ENST00000380181.3:c.154-45dupA
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369470
  ensembl transcript: ENST00000380127
  gene symbol: GDI2
  hgvsc: ENST00000380127.1:c.166-45dupA
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369475
  ensembl transcript: ENST00000380132
  gene symbol: GDI2
  hgvsc: ENST00000380132.4:c.166-45dupA
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000394177
  ensembl transcript: ENST00000418688
  gene symbol: GDI2
  hgvsc: ENST00000418688.1:c.46-45dupA
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476707
  ensembl transcript: ENST00000608581
  gene symbol: GDI2
  hgvsc: ENST00000608581.1:c.88-45dupA
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476832
  ensembl transcript: ENST00000609712
  gene symbol: GDI2
  hgvsc: ENST00000609712.1:c.166-45dupA
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369538
  ensembl transcript: ENST00000380191
  gene symbol: GDI2
  hgvsc: ENST00000380191.4:c.154-45dupA
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000401733
  ensembl transcript: ENST00000456041
  gene symbol: GDI2
  hgvsc: ENST00000456041.1:c.154-45dupA
  variant of: http://identifiers.org/hgnc/4227
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5889
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1524
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7788
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1537
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14476
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14992
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3523
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7334
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2147
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 305
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2087
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 248
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 335
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4965
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2313
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1241
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

10-5838870-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5838870
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 5838870
    reference: chr 10
allele count: 1
allele frequency: 9.937986961361106e-6
allele num: 100624
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369528
  ensembl transcript: ENST00000380181
  gene symbol: GDI2
  hgvsc: ENST00000380181.3:c.154-45A>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000394177
  ensembl transcript: ENST00000418688
  gene symbol: GDI2
  hgvsc: ENST00000418688.1:c.46-45A>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476707
  ensembl transcript: ENST00000608581
  gene symbol: GDI2
  hgvsc: ENST00000608581.1:c.88-45A>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369475
  ensembl transcript: ENST00000380132
  gene symbol: GDI2
  hgvsc: ENST00000380132.4:c.166-45A>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476832
  ensembl transcript: ENST00000609712
  gene symbol: GDI2
  hgvsc: ENST00000609712.1:c.166-45A>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000401733
  ensembl transcript: ENST00000456041
  gene symbol: GDI2
  hgvsc: ENST00000456041.1:c.154-45A>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369538
  ensembl transcript: ENST00000380191
  gene symbol: GDI2
  hgvsc: ENST00000380191.4:c.154-45A>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369470
  ensembl transcript: ENST00000380127
  gene symbol: GDI2
  hgvsc: ENST00000380127.1:c.166-45A>G
  variant of: http://identifiers.org/hgnc/4227
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3497
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7798
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1541
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7342
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14445
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1526
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5897
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15017
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5565
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4349
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4982
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 363
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 248
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1204
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6730
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2131
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum

10-5842510-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 5842510
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 5842510
    reference: chr 10
allele count: 1
allele frequency: 8.24715060946443e-6
allele num: 121254
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369475
  ensembl transcript: ENST00000380132
  gene symbol: GDI2
  hgvsc: ENST00000380132.4:c.165+51C>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369538
  ensembl transcript: ENST00000380191
  gene symbol: GDI2
  hgvsc: ENST00000380191.4:c.153+51C>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000401733
  ensembl transcript: ENST00000456041
  gene symbol: GDI2
  hgvsc: ENST00000456041.1:c.153+51C>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000394177
  ensembl transcript: ENST00000418688
  gene symbol: GDI2
  hgvsc: ENST00000418688.1:c.46-3685C>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476707
  ensembl transcript: ENST00000608581
  gene symbol: GDI2
  hgvsc: ENST00000608581.1:c.87+51C>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000476832
  ensembl transcript: ENST00000609712
  gene symbol: GDI2
  hgvsc: ENST00000609712.1:c.165+51C>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369470
  ensembl transcript: ENST00000380127
  gene symbol: GDI2
  hgvsc: ENST00000380127.1:c.165+51C>G
  variant of: http://identifiers.org/hgnc/4227
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000057608
  ensembl protein: ENSP00000369528
  ensembl transcript: ENST00000380181
  gene symbol: GDI2
  hgvsc: ENST00000380181.3:c.153+51C>G
  variant of: http://identifiers.org/hgnc/4227
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3627
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12380
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 949
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11476
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1963
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9677
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1263
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3152
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1008
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7137
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4859
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5961
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2493
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 150
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12270
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
reference allele: G

GenotypeQuality
all individuals: 5510
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3923
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2952
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2165
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 333
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3354
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3124
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1115
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7375
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 14252
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.218323586744639e-4
allele num: 8208
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6518
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11300
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9468
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16094
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64352
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.39e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.788e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.93e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.48e-1

FS
type: SiteQuality
SIO_000300: 8.065e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.4e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.545e0

DP
type: SiteQuality
SIO_000300: 1.692144e6

QD
type: SiteQuality
SIO_000300: 1.768e1

GenotypeQuality
all individuals: 3923
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1606
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 671
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2952
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11300
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8208
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9468
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6518
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.553953257086027e-5
allele num: 64352
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16094
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.39e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.768e1

VQSLOD
type: SiteQuality
SIO_000300: -5.788e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.4e-3

DP
type: SiteQuality
SIO_000300: 1.692144e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.48e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.545e0

FS
type: SiteQuality
SIO_000300: 8.065e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.93e-1

GenotypeQuality
all individuals: 4568
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 559
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 883
bin: 3.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.209637357178341e-5
allele num: 16104
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8546
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10176
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66262
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.19e-2

VQSLOD
type: SiteQuality
SIO_000300: -4.361e-1

QD
type: SiteQuality
SIO_000300: 9.109999999999999e0

DP
type: SiteQuality
SIO_000300: 1.863138e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.01e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.093e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.55e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.02e0

GenotypeQuality
all individuals: 378
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3245
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 873
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variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
all individuals: 4571
bin: 9.75e1
variant carriers: 34

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1174
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 526
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.673026886383348e-5
allele num: 11530
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10178
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16116
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 33
allele frequency: 4.980680994928761e-4
allele num: 66256
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8550
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.86443e6

ClippingRankSum
type: SiteQuality
SIO_000300: -5.0e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.02e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.0e-2

VQSLOD
type: SiteQuality
SIO_000300: 5.64e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.5e-3

MQ
type: SiteQuality
SIO_000300: 5.974e1

QD
type: SiteQuality
SIO_000300: 1.557e1

GenotypeQuality
all individuals: 13
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 50
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variant carriers: 0

GenotypeQuality
all individuals: 3218
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16124
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10182
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.508932882665379e-5
allele num: 66272
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8552
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.24e-2

FS
type: SiteQuality
SIO_000300: 6.047e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.96e0

DP
type: SiteQuality
SIO_000300: 1.870276e6

VQSLOD
type: SiteQuality
SIO_000300: 4.79e-1

QD
type: SiteQuality
SIO_000300: 1.27e1

MQRankSum
type: SiteQuality
SIO_000300: 7.89e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.99e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.95e-1

MQ
type: SiteQuality
SIO_000300: 5.932e1

GenotypeQuality
all individuals: 15
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 598
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 33588
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10180
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.169043722235212e-4
allele num: 8554
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16112
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66264
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.755e0

FS
type: SiteQuality
SIO_000300: 5.768e0

MQRankSum
type: SiteQuality
SIO_000300: 6.04e-1

DP
type: SiteQuality
SIO_000300: 1.871869e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.09e-2

QD
type: SiteQuality
SIO_000300: 1.049e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.36e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.09e0

VQSLOD
type: SiteQuality
SIO_000300: 5.9e-1

MQ
type: SiteQuality
SIO_000300: 5.96e1

GenotypeQuality
all individuals: 16
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
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variant carriers: 0

GenotypeQuality
all individuals: 34889
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1173
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 115
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variant carriers: 0

GenotypeQuality
all individuals: 2085
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4533
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3210
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10212
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16188
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.50793172085168e-5
allele num: 66316
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.5e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 2.12e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.28e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.75e0

MQRankSum
type: SiteQuality
SIO_000300: 7.099999999999999e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.56e-1

QD
type: SiteQuality
SIO_000300: 1.094e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.88355e6

GenotypeQuality
all individuals: 3208
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9254
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 16
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 1176
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16218
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10232
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66340
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.165772907437631e-4
allele num: 8578
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.886361e6

ClippingRankSum
type: SiteQuality
SIO_000300: 3.55e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.5e-3

MQRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.606e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.14e-1

VQSLOD
type: SiteQuality
SIO_000300: -8.113e-1

FS
type: SiteQuality
SIO_000300: 9.163e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.64e0

MQ
type: SiteQuality
SIO_000300: 5.981e1

GenotypeQuality
all individuals: 3213
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 197
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 870
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GenotypeQuality
all individuals: 256
bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16238
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.520523175215478e-5
allele num: 66364
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10232
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8584
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.81e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.642e-1

MQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 7.25e-1

DP
type: SiteQuality
SIO_000300: 1.887632e6

BaseQRankSum
type: SiteQuality
SIO_000300: 4.34e0

QD
type: SiteQuality
SIO_000300: 1.655e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.66e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 16
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
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variant carriers: 0

GenotypeQuality
all individuals: 46
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 4
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 61
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10240
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66370
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.164958061509786e-4
allele num: 8584
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11534
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16242
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.362e0

VQSLOD
type: SiteQuality
SIO_000300: -9.288e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -2.43e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.86e0

FS
type: SiteQuality
SIO_000300: 8.891999999999999e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.47e-1

DP
type: SiteQuality
SIO_000300: 1.888558e6

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 158
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variant carriers: 0

GenotypeQuality
all individuals: 3215
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10272
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11540
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8590
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66408
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.136475208640157e-5
allele num: 16296
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.312e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.12e0

VQSLOD
type: SiteQuality
SIO_000300: 2.63e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.03e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.33e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -9.82e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.593e0

DP
type: SiteQuality
SIO_000300: 1.891797e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 9

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 4.75e1
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GenotypeQuality
all individuals: 2091
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10278
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 9
allele frequency: 1.354524110529167e-4
allele num: 66444
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16352
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.98e0

FS
type: SiteQuality
SIO_000300: 1.504e0

VQSLOD
type: SiteQuality
SIO_000300: 3.22e0

MQRankSum
type: SiteQuality
SIO_000300: 1.77e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.22e-1

QD
type: SiteQuality
SIO_000300: 1.517e1

DP
type: SiteQuality
SIO_000300: 1.895333e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.26e-1

MQ
type: SiteQuality
SIO_000300: 5.984e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-3

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 10
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66674
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.641342074816814e-5
allele num: 10372
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.97e1

FS
type: SiteQuality
SIO_000300: 4.328e0

VQSLOD
type: SiteQuality
SIO_000300: 8.7e-1

MQRankSum
type: SiteQuality
SIO_000300: -8.72e-1

QD
type: SiteQuality
SIO_000300: 1.598e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.07e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 6.33e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.156e0

DP
type: SiteQuality
SIO_000300: 1.903802e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.12e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499745043342632e-5
allele num: 66678
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10376
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.904004e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.07e-2

MQ
type: SiteQuality
SIO_000300: 5.9e1

FS
type: SiteQuality
SIO_000300: 5.471e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.92e-1

QD
type: SiteQuality
SIO_000300: 1.37e1

VQSLOD
type: SiteQuality
SIO_000300: -2.597e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.81e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.58e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.508e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499295331194339e-5
allele num: 66698
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.4e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.15e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.562e0

MQRankSum
type: SiteQuality
SIO_000300: 1.61e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.41e-2

DP
type: SiteQuality
SIO_000300: 1.904619e6

QD
type: SiteQuality
SIO_000300: 1.312e1

FS
type: SiteQuality
SIO_000300: 8.599e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 2085
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.15606936416185e-4
allele num: 8650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66714
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.90509e6

MQ
type: SiteQuality
SIO_000300: 5.907e1

VQSLOD
type: SiteQuality
SIO_000300: -1.32e-1

MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.572e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.929e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.045e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.8e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.512401693889897e-4
allele num: 6612
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498845888665727e-5
allele num: 66718
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.24e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
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QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 5.3e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.88e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.45e0

DP
type: SiteQuality
SIO_000300: 1.905313e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.2e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.498845888665727e-5
allele num: 66718
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.75e-1

InbreedingCoeff
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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MQ
type: SiteQuality
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VQSLOD
type: SiteQuality
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DP
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 5.38e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.67e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.03e-1

FS
type: SiteQuality
SIO_000300: 4.155e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498756032493031e-5
allele num: 66722
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.276e0

ReadPosRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 1.09e-1

QD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 1.61e0

BaseQRankSum
type: SiteQuality
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DP
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.974e1

VQSLOD
type: SiteQuality
SIO_000300: 3.35e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.729206294310911e-4
allele num: 11566
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66722
num of homozygotes: 0

South Asian
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allele count: 0
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allele num: 16510
num of homozygotes: 0

QD
type: SiteQuality
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MQ
type: SiteQuality
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BaseQRankSum
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SIO_000300: -3.008e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.62e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.33e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.1e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.85e-1

FS
type: SiteQuality
SIO_000300: 5.91e-1

DP
type: SiteQuality
SIO_000300: 1.905374e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.101321585903084e-3
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498711108446736e-5
allele num: 66724
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 4.54e-1

ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.118e0

DP
type: SiteQuality
SIO_000300: 1.905448e6

BaseQRankSum
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SIO_000300: 4.53e0

MQRankSum
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SIO_000300: -3.83e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.46e-1

QD
type: SiteQuality
SIO_000300: 1.583e1

MQ
type: SiteQuality
SIO_000300: 5.975e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 2.997691777331455e-5
allele num: 66718
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.016e0

QD
type: SiteQuality
SIO_000300: 1.567e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.75e0

FS
type: SiteQuality
SIO_000300: 6.38e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.73e-1

ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 1.41e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-3

DP
type: SiteQuality
SIO_000300: 1.905161e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.49907057624273e-5
allele num: 66708
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -8.53e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.17e0

MQ
type: SiteQuality
SIO_000300: 5.925e1

QD
type: SiteQuality
SIO_000300: 1.072e1

FS
type: SiteQuality
SIO_000300: 3.846e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.4e-3

DP
type: SiteQuality
SIO_000300: 1.904737e6

VQSLOD
type: SiteQuality
SIO_000300: -3.489e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.79e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.092e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499295331194339e-5
allele num: 66698
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.7e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.134e0

MQ
type: SiteQuality
SIO_000300: 5.967e1

VQSLOD
type: SiteQuality
SIO_000300: 3.19e-1

ClippingRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.242e1

DP
type: SiteQuality
SIO_000300: 1.904444e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.29e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.33e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10388
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.49947518368571e-5
allele num: 66690
num of homozygotes: 0

South Asian
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allele count: 0
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VQSLOD
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ReadPosRankSum
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ClippingRankSum
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BaseQRankSum
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InbreedingCoeff
type: SiteQuality
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QD
type: SiteQuality
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MQRankSum
type: SiteQuality
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FS
type: SiteQuality
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DP
type: SiteQuality
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MQ
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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South Asian
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European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
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QD
type: SiteQuality
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InbreedingCoeff
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VQSLOD
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ReadPosRankSum
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DP
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MQ
type: SiteQuality
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ClippingRankSum
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BaseQRankSum
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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Latino
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allele num: 11542
num of homozygotes: 0

South Asian
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European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
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num of homozygotes: 0

Other
type: Population
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DP
type: SiteQuality
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MQRankSum
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VQSLOD
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ReadPosRankSum
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BaseQRankSum
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InbreedingCoeff
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FS
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MQ
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QD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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num of homozygotes: 0

European (Non-Finnish)
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num of homozygotes: 0

Other
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num of homozygotes: 0

European (Finnish)
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East Asian
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Latino
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allele frequency: 2.685843008144169e-3
allele num: 11542
num of homozygotes: 0

South Asian
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BaseQRankSum
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MQ
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InbreedingCoeff
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QD
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MQRankSum
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FS
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ReadPosRankSum
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ClippingRankSum
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VQSLOD
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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South Asian
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European (Non-Finnish)
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allele frequency: 7.533978241870837e-5
allele num: 66366
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East Asian
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allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10172
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.29e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.8e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.61e-1

MQ
type: SiteQuality
SIO_000300: 5.949e1

VQSLOD
type: SiteQuality
SIO_000300: 1.93e0

FS
type: SiteQuality
SIO_000300: 2.033e0

DP
type: SiteQuality
SIO_000300: 1.889925e6

MQRankSum
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SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.34e0

QD
type: SiteQuality
SIO_000300: 1.504e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6578
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66106
num of homozygotes: 0

Latino
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allele frequency: 8.707767328456984e-5
allele num: 11484
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16428
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10028
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.873966e6

FS
type: SiteQuality
SIO_000300: 6.09e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.31e-1

MQ
type: SiteQuality
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VQSLOD
type: SiteQuality
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QD
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 8.3e-3

BaseQRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: -1.21e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9964
num of homozygotes: 0

South Asian
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8574
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6576
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11480
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.515289268721399e-5
allele num: 65994
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 4.83e0

VQSLOD
type: SiteQuality
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ReadPosRankSum
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QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.961e1

ClippingRankSum
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DP
type: SiteQuality
SIO_000300: 1.866054e6

FS
type: SiteQuality
SIO_000300: 1.336e0

MQRankSum
type: SiteQuality
SIO_000300: -3.83e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.519387383007172e-5
allele num: 65816
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6572
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11466
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9874
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8558
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16380
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.1e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.77e0

MQ
type: SiteQuality
SIO_000300: 5.239e1

DP
type: SiteQuality
SIO_000300: 1.847049e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.74e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.39e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.399999999999999e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -4.52e-1

QD
type: SiteQuality
SIO_000300: 6.61e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.020199959192002e-4
allele num: 9802
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.094959468519534e-5
allele num: 65628
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8520
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11452
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16354
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6572
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.899e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.58e0

MQRankSum
type: SiteQuality
SIO_000300: -5.9e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.94e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.06e-2

QD
type: SiteQuality
SIO_000300: 1.632e1

FS
type: SiteQuality
SIO_000300: 7.14e-1

DP
type: SiteQuality
SIO_000300: 1.815194e6

ClippingRankSum
type: SiteQuality
SIO_000300: -6.74e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.57e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6566
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.533036946190403e-5
allele num: 65230
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16314
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11418
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8460
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9566
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.99e-1

QD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.736939e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.55e-1

InbreedingCoeff
type: SiteQuality
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MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.808e1

VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: 2.94e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65182
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11422
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.183151916706105e-4
allele num: 8452
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9576
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16298
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.77e-1

MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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BaseQRankSum
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
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DP
type: SiteQuality
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MQ
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 2.876e0

QD
type: SiteQuality
SIO_000300: 1.576e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 2
allele frequency: 1.252348152786475e-4
allele num: 15970
num of homozygotes: 0

European (Finnish)
type: Population
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allele frequency: 0.0e0
allele num: 6504
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African
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allele count: 0
allele frequency: 0.0e0
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Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 63626
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8144
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11308
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.8e-3

ClippingRankSum
type: SiteQuality
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MQ
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
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MQRankSum
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QD
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VQSLOD
type: SiteQuality
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DP
type: SiteQuality
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
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num of homozygotes: 0

South Asian
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allele frequency: 6.084205402774397e-5
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East Asian
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African
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allele frequency: 0.0e0
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Latino
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European (Non-Finnish)
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allele frequency: 0.0e0
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European (Finnish)
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FS
type: SiteQuality
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MQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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DP
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BaseQRankSum
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VQSLOD
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ClippingRankSum
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MQ
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InbreedingCoeff
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QD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 138
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variant carriers: 0

Latino
type: Population
allele count: 2
allele frequency: 1.738828029907842e-4
allele num: 11502
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
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South Asian
type: Population
allele count: 6
allele frequency: 3.646973012399708e-4
allele num: 16452
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 32
allele frequency: 4.810872572012749e-4
allele num: 66516
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10172
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.27e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

DP
type: SiteQuality
SIO_000300: 1.888042e6

MQRankSum
type: SiteQuality
SIO_000300: 2.45e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.0e0

QD
type: SiteQuality
SIO_000300: 1.515e1

VQSLOD
type: SiteQuality
SIO_000300: 5.68e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.62e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 364
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10174
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11506
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.013409904086112e-5
allele num: 66518
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16446
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.23e0

VQSLOD
type: SiteQuality
SIO_000300: -7.79e-2

MQRankSum
type: SiteQuality
SIO_000300: 7.37e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.88892e6

ClippingRankSum
type: SiteQuality
SIO_000300: 9.2e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

QD
type: SiteQuality
SIO_000300: 1.728e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.8e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11506
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503126503126503e-5
allele num: 66528
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16448
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10190
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.23e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.56e0

QD
type: SiteQuality
SIO_000300: 1.773e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

VQSLOD
type: SiteQuality
SIO_000300: -2.373e0

FS
type: SiteQuality
SIO_000300: 2.454e0

MQRankSum
type: SiteQuality
SIO_000300: 1.76e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.295e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.890337e6

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.071645415907711e-5
allele num: 16470
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10264
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66590
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.896819e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.2e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.995e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.6e0

MQRankSum
type: SiteQuality
SIO_000300: 2.39e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

VQSLOD
type: SiteQuality
SIO_000300: 8.159999999999999e-1

QD
type: SiteQuality
SIO_000300: 1.146e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10292
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16480
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157675387821255e-4
allele num: 8638
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66624
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.77e-1

FS
type: SiteQuality
SIO_000300: 3.188e0

QD
type: SiteQuality
SIO_000300: 1.238e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.687e0

MQ
type: SiteQuality
SIO_000300: 5.947e1

VQSLOD
type: SiteQuality
SIO_000300: 9.21e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.71e0

DP
type: SiteQuality
SIO_000300: 1.898592e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.2e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.4e0

GenotypeQuality
all individuals: 42618
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 8

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66708
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Latino
type: Population
allele count: 8
allele frequency: 6.924009001211701e-4
allele num: 11554
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10376
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.90212e6

ClippingRankSum
type: SiteQuality
SIO_000300: -6.2e-2

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.933e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.175e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.88e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.47e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.49902563333833e-5
allele num: 66710
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10376
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.1e-2

MQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 7.333e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.27e-1

DP
type: SiteQuality
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QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.931e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.47e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.52e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.655011251514626e-5
allele num: 11554
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66716
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.428e0

MQ
type: SiteQuality
SIO_000300: 5.845e1

ClippingRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 2.07e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.901837e6

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.389e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.864e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
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allele num: 908
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South Asian
type: Population
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African
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allele count: 1
allele frequency: 9.63020030816641e-5
allele num: 10384
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66716
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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ClippingRankSum
type: SiteQuality
SIO_000300: -8.48e-1

InbreedingCoeff
type: SiteQuality
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QD
type: SiteQuality
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MQ
type: SiteQuality
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VQSLOD
type: SiteQuality
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MQRankSum
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BaseQRankSum
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SIO_000300: -3.065e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.05e0

FS
type: SiteQuality
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DP
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66714
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African
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allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.876e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

MQRankSum
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QD
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VQSLOD
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ReadPosRankSum
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SIO_000300: 1.23e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.718e0

DP
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SIO_000300: 1.901965e6

ClippingRankSum
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SIO_000300: -1.582e0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498935755613514e-5
allele num: 66714
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

FS
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SIO_000300: 0.0e0

DP
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ReadPosRankSum
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ClippingRankSum
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VQSLOD
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BaseQRankSum
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MQ
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MQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.498935755613514e-5
allele num: 66714
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
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African
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allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -4.394e-1

InbreedingCoeff
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MQRankSum
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FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
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SIO_000300: -3.867e0

MQ
type: SiteQuality
SIO_000300: 5.897e1

DP
type: SiteQuality
SIO_000300: 1.901822e6

ClippingRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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QD
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SIO_000300: 1.242e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.498890820792613e-5
allele num: 66716
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.974e1

DP
type: SiteQuality
SIO_000300: 1.90185e6

MQRankSum
type: SiteQuality
SIO_000300: -8.81e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.85e-1

FS
type: SiteQuality
SIO_000300: 2.247e0

VQSLOD
type: SiteQuality
SIO_000300: -2.31e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.61e0

QD
type: SiteQuality
SIO_000300: 9.52e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.2e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10378
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499250374812594e-5
allele num: 66700
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.313e0

QD
type: SiteQuality
SIO_000300: 8.94e0

FS
type: SiteQuality
SIO_000300: 6.98e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.19e-1

DP
type: SiteQuality
SIO_000300: 1.901696e6

VQSLOD
type: SiteQuality
SIO_000300: -8.101e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 8.45e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.13e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.499295331194339e-5
allele num: 66698
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10380
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

East Asian
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allele count: 0
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allele num: 8644
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
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BaseQRankSum
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MQ
type: SiteQuality
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FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.901582e6

QD
type: SiteQuality
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ReadPosRankSum
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SIO_000300: 4.57e-1

MQRankSum
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.817961459217065e-4
allele num: 16502
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66672
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
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FS
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DP
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MQ
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MQRankSum
type: SiteQuality
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ClippingRankSum
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QD
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VQSLOD
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InbreedingCoeff
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
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allele num: 66656
num of homozygotes: 0

South Asian
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allele frequency: 1.21256214380987e-4
allele num: 16494
num of homozygotes: 0

Latino
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East Asian
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allele frequency: 0.0e0
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European (Finnish)
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African
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Other
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MQRankSum
type: SiteQuality
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QD
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MQ
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VQSLOD
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BaseQRankSum
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ReadPosRankSum
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ClippingRankSum
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FS
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DP
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Other
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European (Non-Finnish)
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allele num: 66118
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European (Finnish)
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Latino
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African
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East Asian
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ClippingRankSum
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MQ
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FS
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MQRankSum
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BaseQRankSum
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InbreedingCoeff
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VQSLOD
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QD
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ReadPosRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65772
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11398
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.754194303550527e-5
allele num: 10252
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6590
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8562
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16334
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 4.59e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.17e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.63e0

DP
type: SiteQuality
SIO_000300: 1.861117e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.69e-1

MQ
type: SiteQuality
SIO_000300: 5.945e1

MQRankSum
type: SiteQuality
SIO_000300: 3.65e-1

QD
type: SiteQuality
SIO_000300: 1.358e1

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 142
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.531581204435459e-5
allele num: 65292
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8472
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11346
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6572
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10196
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16266
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.02e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -3.146e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.41e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

MQ
type: SiteQuality
SIO_000300: 6.003e1

QD
type: SiteQuality
SIO_000300: 1.345e1

MQRankSum
type: SiteQuality
SIO_000300: 1.56e0

DP
type: SiteQuality
SIO_000300: 1.832595e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.58e-1

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2662
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16204
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8434
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.160480517480364e-5
allele num: 64930
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6548
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10150
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11306
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.937e1

VQSLOD
type: SiteQuality
SIO_000300: -3.133e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.25e-1

QD
type: SiteQuality
SIO_000300: 2.7e-1

MQRankSum
type: SiteQuality
SIO_000300: -8.699999999999999e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -5.25e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.806139e6

BaseQRankSum
type: SiteQuality
SIO_000300: -5.404e0

GenotypeQuality
all individuals: 733
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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variant carriers: 282

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1688
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 8
allele frequency: 7.880220646178094e-4
allele num: 10152
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 215
allele frequency: 3.310748383122882e-3
allele num: 64940
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16202
num of homozygotes: 0

Other
type: Population
allele count: 5
allele frequency: 5.555555555555556e-3
allele num: 900
num of homozygotes: 0

Latino
type: Population
allele count: 43
allele frequency: 3.803290288342473e-3
allele num: 11306
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8432
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 12
allele frequency: 1.83206106870229e-3
allele num: 6550
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.69e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 4.64e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.43e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.57e1

VQSLOD
type: SiteQuality
SIO_000300: 5.85e0

MQRankSum
type: SiteQuality
SIO_000300: 2.98e-1

DP
type: SiteQuality
SIO_000300: 1.807572e6

GenotypeQuality
all individuals: 105
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8103
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 31575
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GenotypeQuality
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GenotypeQuality
all individuals: 2580
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variant carriers: 1

GenotypeQuality
all individuals: 1469
bin: 2.75e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.92379082634303e-5
allele num: 11206
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16068
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63988
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8260
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9994
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6494
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.699531e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -9.1e-2

QD
type: SiteQuality
SIO_000300: 1.721e1

VQSLOD
type: SiteQuality
SIO_000300: 4.63e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.909999999999999e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.3e-1

MQ
type: SiteQuality
SIO_000300: 5.619e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.082e0

GenotypeQuality
all individuals: 7920
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 562
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variant carriers: 0

GenotypeQuality
all individuals: 718
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variant carriers: 0

GenotypeQuality
all individuals: 11
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GenotypeQuality
all individuals: 38
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GenotypeQuality
all individuals: 109
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 318
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GenotypeQuality
all individuals: 1479
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9960
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8218
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6484
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.566563273490616e-5
allele num: 63834
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11176
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16058
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.42e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.24e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.28e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 2.0e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.666571e6

QD
type: SiteQuality
SIO_000300: 1.577e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.99e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1939
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GenotypeQuality
all individuals: 680
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GenotypeQuality
all individuals: 2579
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GenotypeQuality
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GenotypeQuality
all individuals: 36
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 45
bin: 1.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6472
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63656
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8178
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16036
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9900
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.97021887334051e-5
allele num: 11148
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.853e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.03e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.42e-1

DP
type: SiteQuality
SIO_000300: 1.637149e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -1.558e0

VQSLOD
type: SiteQuality
SIO_000300: -5.491e-1

MQ
type: SiteQuality
SIO_000300: 5.963e1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.02e0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15183
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 687
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GenotypeQuality
all individuals: 1077
bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6442
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.583481124904991e-5
allele num: 63152
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8048
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9810
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11070
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15960
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.540279e6

VQSLOD
type: SiteQuality
SIO_000300: -2.133e0

MQRankSum
type: SiteQuality
SIO_000300: 3.39e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.17e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.580000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.4e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.68e0

QD
type: SiteQuality
SIO_000300: 2.261e1

GenotypeQuality
all individuals: 2581
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 270
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 6253
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8048
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15960
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.806032147372223e-4
allele num: 11074
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6444
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63124
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9816
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.533e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.58e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.96e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.19e-1

MQ
type: SiteQuality
SIO_000300: 5.934e1

DP
type: SiteQuality
SIO_000300: 1.53881e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.900000000000001e-2

QD
type: SiteQuality
SIO_000300: 1.475e1

GenotypeQuality
all individuals: 385
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variant carriers: 0

GenotypeQuality
all individuals: 239
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GenotypeQuality
all individuals: 4249
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GenotypeQuality
all individuals: 250
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GenotypeQuality
all individuals: 3683
bin: 2.75e1
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GenotypeQuality
all individuals: 257
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GenotypeQuality
all individuals: 505
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GenotypeQuality
all individuals: 1553
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GenotypeQuality
all individuals: 792
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GenotypeQuality
all individuals: 2194
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GenotypeQuality
all individuals: 900
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GenotypeQuality
all individuals: 308
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15582
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7632
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9532
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.626756897449245e-5
allele num: 61472
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6368
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10916
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.9e-1

DP
type: SiteQuality
SIO_000300: 1.371253e6

MQRankSum
type: SiteQuality
SIO_000300: 4.52e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.41e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.049e0

QD
type: SiteQuality
SIO_000300: 8.720000000000001e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.51e-1

FS
type: SiteQuality
SIO_000300: 2.976e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-3

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 241
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 249
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18461
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15548
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.261046796021523e-5
allele num: 61330
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10894
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6362
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9504
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7578
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.18e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.88e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 6.09e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.8e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.251e0

MQRankSum
type: SiteQuality
SIO_000300: 2.65e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.351969e6

QD
type: SiteQuality
SIO_000300: 1.326e1

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 249
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10604
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6418
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14844
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8892
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.725327812284334e-5
allele num: 57960
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6114
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 850
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.7e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -7.16e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.314e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.48e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.46e1

VQSLOD
type: SiteQuality
SIO_000300: -2.863e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.258e0

DP
type: SiteQuality
SIO_000300: 1.243722e6

GenotypeQuality
all individuals: 4955
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2488
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 10348
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variant carriers: 0

GenotypeQuality
all individuals: 801
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.140510948905109e-4
allele num: 8768
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6026
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10526
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14678
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 57242
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6056
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.181e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -1.053e0

DP
type: SiteQuality
SIO_000300: 1.228957e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.500000000000001e-3

MQRankSum
type: SiteQuality
SIO_000300: 4.18e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.186e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.75e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.26e0

GenotypeQuality
all individuals: 625
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14717
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 339
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variant carriers: 0

GenotypeQuality
all individuals: 8304
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8478
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 822
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5848
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10328
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.963788300835655e-5
allele num: 14360
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5380
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 55496
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.206316e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.898e0

QD
type: SiteQuality
SIO_000300: 1.198e1

MQRankSum
type: SiteQuality
SIO_000300: -1.139e0

MQ
type: SiteQuality
SIO_000300: 6.102e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.63e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.8e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.01e0

GenotypeQuality
all individuals: 8486
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 787
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 304
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variant carriers: 0

GenotypeQuality
all individuals: 2575
bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 818
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10294
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5844
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.803426510369702e-5
allele num: 55450
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8488
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5384
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14346
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -8.77e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.56e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.02e-2

QD
type: SiteQuality
SIO_000300: 2.205e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -2.129e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.57e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.205808e6

ClippingRankSum
type: SiteQuality
SIO_000300: -4.84e-1

GenotypeQuality
all individuals: 66
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 5
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variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0