10-6005684-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6005684
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 6005684
    reference: chr 10
allele count: 2
allele frequency: 1.778251978305326e-5
allele num: 112470
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379974
  gene symbol: IL15RA
  hgvsc: ENST00000379974.1:n.404-3154C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369306
  ensembl transcript: ENST00000379971
  gene symbol: IL15RA
  hgvsc: ENST00000379971.1:c.89-3154C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000431529
  ensembl transcript: ENST00000525219
  gene symbol: IL15RA
  hgvsc: ENST00000525219.2:c.274+22C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435454
  ensembl transcript: ENST00000528354
  gene symbol: IL15RA
  hgvsc: ENST00000528354.1:c.283+2424C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000432691
  ensembl transcript: ENST00000532039
  gene symbol: IL15RA
  hgvsc: ENST00000532039.1:c.195+2424C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380420
  ensembl transcript: ENST00000397246
  gene symbol: IL15RA
  hgvsc: ENST00000397246.3:c.175+2424C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380423
  ensembl transcript: ENST00000397251
  gene symbol: IL15RA
  hgvsc: ENST00000397251.3:c.187+22C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380421
  ensembl transcript: ENST00000397248
  gene symbol: IL15RA
  hgvsc: ENST00000397248.2:c.274+22C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435995
  ensembl transcript: ENST00000530685
  gene symbol: IL15RA
  hgvsc: ENST00000530685.1:c.283+2424C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000405107
  ensembl transcript: ENST00000453922
  gene symbol: IL15RA
  hgvsc: ENST00000453922.1:c.271+22C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369312
  ensembl transcript: ENST00000379977
  gene symbol: IL15RA
  hgvsc: ENST00000379977.3:c.382+22C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380426
  ensembl transcript: ENST00000397255
  gene symbol: IL15RA
  hgvsc: ENST00000397255.3:c.382+22C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379972
  gene symbol: IL15RA
  hgvsc: ENST00000379972.2:n.606+2424C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380422
  ensembl transcript: ENST00000397250
  gene symbol: IL15RA
  hgvsc: ENST00000397250.2:c.89-3154C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000532948
  gene symbol: IL15RA
  hgvsc: ENST00000532948.1:n.457+2424C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000405128
  ensembl transcript: ENST00000447291
  gene symbol: IL15RA
  hgvsc: ENST00000447291.1:c.90+22C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000534292
  gene symbol: IL15RA
  hgvsc: ENST00000534292.1:n.563+22C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000395113
  ensembl transcript: ENST00000429135
  gene symbol: IL15RA
  hgvsc: ENST00000429135.2:c.283+2424C>T
  variant of: http://identifiers.org/hgnc/5978
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24799
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7034
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1898
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3964
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
population: African
population: Latino
reference allele: G
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff

10-6005685-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6005685
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 6005685
    reference: chr 10
allele count: 1
allele frequency: 8.863519526333516e-6
allele num: 112822
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379974
  gene symbol: IL15RA
  hgvsc: ENST00000379974.1:n.404-3155T>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379972
  gene symbol: IL15RA
  hgvsc: ENST00000379972.2:n.606+2423T>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000405128
  ensembl transcript: ENST00000447291
  gene symbol: IL15RA
  hgvsc: ENST00000447291.1:c.90+21T>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380420
  ensembl transcript: ENST00000397246
  gene symbol: IL15RA
  hgvsc: ENST00000397246.3:c.175+2423T>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000395113
  ensembl transcript: ENST00000429135
  gene symbol: IL15RA
  hgvsc: ENST00000429135.2:c.283+2423T>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380422
  ensembl transcript: ENST00000397250
  gene symbol: IL15RA
  hgvsc: ENST00000397250.2:c.89-3155T>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000534292
  gene symbol: IL15RA
  hgvsc: ENST00000534292.1:n.563+21T>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369306
  ensembl transcript: ENST00000379971
  gene symbol: IL15RA
  hgvsc: ENST00000379971.1:c.89-3155T>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435454
  ensembl transcript: ENST00000528354
  gene symbol: IL15RA
  hgvsc: ENST00000528354.1:c.283+2423T>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000532948
  gene symbol: IL15RA
  hgvsc: ENST00000532948.1:n.457+2423T>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435995
  ensembl transcript: ENST00000530685
  gene symbol: IL15RA
  hgvsc: ENST00000530685.1:c.283+2423T>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000405107
  ensembl transcript: ENST00000453922
  gene symbol: IL15RA
  hgvsc: ENST00000453922.1:c.271+21T>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380426
  ensembl transcript: ENST00000397255
  gene symbol: IL15RA
  hgvsc: ENST00000397255.3:c.382+21T>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380423
  ensembl transcript: ENST00000397251
  gene symbol: IL15RA
  hgvsc: ENST00000397251.3:c.187+21T>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380421
  ensembl transcript: ENST00000397248
  gene symbol: IL15RA
  hgvsc: ENST00000397248.2:c.274+21T>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369312
  ensembl transcript: ENST00000379977
  gene symbol: IL15RA
  hgvsc: ENST00000379977.3:c.382+21T>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000432691
  ensembl transcript: ENST00000532039
  gene symbol: IL15RA
  hgvsc: ENST00000532039.1:c.195+2423T>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000431529
  ensembl transcript: ENST00000525219
  gene symbol: IL15RA
  hgvsc: ENST00000525219.2:c.274+21T>C
  variant of: http://identifiers.org/hgnc/5978
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26156
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: African
reference allele: A
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: DP

10-6005691-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6005691
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 6005691
    reference: chr 10
allele count: 1
allele frequency: 8.819119851838787e-6
allele num: 113390
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435995
  ensembl transcript: ENST00000530685
  gene symbol: IL15RA
  hgvsc: ENST00000530685.1:c.283+2417A>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000431529
  ensembl transcript: ENST00000525219
  gene symbol: IL15RA
  hgvsc: ENST00000525219.2:c.274+15A>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435454
  ensembl transcript: ENST00000528354
  gene symbol: IL15RA
  hgvsc: ENST00000528354.1:c.283+2417A>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000405128
  ensembl transcript: ENST00000447291
  gene symbol: IL15RA
  hgvsc: ENST00000447291.1:c.90+15A>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380420
  ensembl transcript: ENST00000397246
  gene symbol: IL15RA
  hgvsc: ENST00000397246.3:c.175+2417A>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000532948
  gene symbol: IL15RA
  hgvsc: ENST00000532948.1:n.457+2417A>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379972
  gene symbol: IL15RA
  hgvsc: ENST00000379972.2:n.606+2417A>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369306
  ensembl transcript: ENST00000379971
  gene symbol: IL15RA
  hgvsc: ENST00000379971.1:c.89-3161A>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380421
  ensembl transcript: ENST00000397248
  gene symbol: IL15RA
  hgvsc: ENST00000397248.2:c.274+15A>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380426
  ensembl transcript: ENST00000397255
  gene symbol: IL15RA
  hgvsc: ENST00000397255.3:c.382+15A>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369312
  ensembl transcript: ENST00000379977
  gene symbol: IL15RA
  hgvsc: ENST00000379977.3:c.382+15A>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000432691
  ensembl transcript: ENST00000532039
  gene symbol: IL15RA
  hgvsc: ENST00000532039.1:c.195+2417A>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000395113
  ensembl transcript: ENST00000429135
  gene symbol: IL15RA
  hgvsc: ENST00000429135.2:c.283+2417A>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000534292
  gene symbol: IL15RA
  hgvsc: ENST00000534292.1:n.563+15A>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380423
  ensembl transcript: ENST00000397251
  gene symbol: IL15RA
  hgvsc: ENST00000397251.3:c.187+15A>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000405107
  ensembl transcript: ENST00000453922
  gene symbol: IL15RA
  hgvsc: ENST00000453922.1:c.271+15A>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380422
  ensembl transcript: ENST00000397250
  gene symbol: IL15RA
  hgvsc: ENST00000397250.2:c.89-3161A>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379974
  gene symbol: IL15RA
  hgvsc: ENST00000379974.1:n.404-3161A>C
  variant of: http://identifiers.org/hgnc/5978
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7976
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3106
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: African
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP

10-6005695-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6005695
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 6005695
    reference: chr 10
allele count: 1
allele frequency: 8.78966335589347e-6
allele num: 113770
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380421
  ensembl transcript: ENST00000397248
  gene symbol: IL15RA
  hgvsc: ENST00000397248.2:c.274+11C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380422
  ensembl transcript: ENST00000397250
  gene symbol: IL15RA
  hgvsc: ENST00000397250.2:c.89-3165C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435995
  ensembl transcript: ENST00000530685
  gene symbol: IL15RA
  hgvsc: ENST00000530685.1:c.283+2413C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000405107
  ensembl transcript: ENST00000453922
  gene symbol: IL15RA
  hgvsc: ENST00000453922.1:c.271+11C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379972
  gene symbol: IL15RA
  hgvsc: ENST00000379972.2:n.606+2413C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380420
  ensembl transcript: ENST00000397246
  gene symbol: IL15RA
  hgvsc: ENST00000397246.3:c.175+2413C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380423
  ensembl transcript: ENST00000397251
  gene symbol: IL15RA
  hgvsc: ENST00000397251.3:c.187+11C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000532948
  gene symbol: IL15RA
  hgvsc: ENST00000532948.1:n.457+2413C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435454
  ensembl transcript: ENST00000528354
  gene symbol: IL15RA
  hgvsc: ENST00000528354.1:c.283+2413C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369306
  ensembl transcript: ENST00000379971
  gene symbol: IL15RA
  hgvsc: ENST00000379971.1:c.89-3165C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380426
  ensembl transcript: ENST00000397255
  gene symbol: IL15RA
  hgvsc: ENST00000397255.3:c.382+11C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379974
  gene symbol: IL15RA
  hgvsc: ENST00000379974.1:n.404-3165C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369312
  ensembl transcript: ENST00000379977
  gene symbol: IL15RA
  hgvsc: ENST00000379977.3:c.382+11C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000395113
  ensembl transcript: ENST00000429135
  gene symbol: IL15RA
  hgvsc: ENST00000429135.2:c.283+2413C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000431529
  ensembl transcript: ENST00000525219
  gene symbol: IL15RA
  hgvsc: ENST00000525219.2:c.274+11C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000432691
  ensembl transcript: ENST00000532039
  gene symbol: IL15RA
  hgvsc: ENST00000532039.1:c.195+2413C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000534292
  gene symbol: IL15RA
  hgvsc: ENST00000534292.1:n.563+11C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000405128
  ensembl transcript: ENST00000447291
  gene symbol: IL15RA
  hgvsc: ENST00000447291.1:c.90+11C>T
  variant of: http://identifiers.org/hgnc/5978
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2179
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2102
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6487
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
population: African
population: European (Finnish)
population: South Asian
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: FS

10-6005705-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6005705
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 6005705
    reference: chr 10
allele count: 1
allele frequency: 8.677241331435909e-6
allele num: 115244
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000405107
  ensembl transcript: ENST00000453922
  gene symbol: IL15RA
  hgvsc: ENST00000453922.1:c.271+1G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000432691
  ensembl transcript: ENST00000532039
  gene symbol: IL15RA
  hgvsc: ENST00000532039.1:c.195+2403G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379972
  gene symbol: IL15RA
  hgvsc: ENST00000379972.2:n.606+2403G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380426
  ensembl transcript: ENST00000397255
  gene symbol: IL15RA
  hgvsc: ENST00000397255.3:c.382+1G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000532948
  gene symbol: IL15RA
  hgvsc: ENST00000532948.1:n.457+2403G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000405128
  ensembl transcript: ENST00000447291
  gene symbol: IL15RA
  hgvsc: ENST00000447291.1:c.90+1G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435454
  ensembl transcript: ENST00000528354
  gene symbol: IL15RA
  hgvsc: ENST00000528354.1:c.283+2403G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369306
  ensembl transcript: ENST00000379971
  gene symbol: IL15RA
  hgvsc: ENST00000379971.1:c.89-3175G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369312
  ensembl transcript: ENST00000379977
  gene symbol: IL15RA
  hgvsc: ENST00000379977.3:c.382+1G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380421
  ensembl transcript: ENST00000397248
  gene symbol: IL15RA
  hgvsc: ENST00000397248.2:c.274+1G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000431529
  ensembl transcript: ENST00000525219
  gene symbol: IL15RA
  hgvsc: ENST00000525219.2:c.274+1G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000534292
  gene symbol: IL15RA
  hgvsc: ENST00000534292.1:n.563+1G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380423
  ensembl transcript: ENST00000397251
  gene symbol: IL15RA
  hgvsc: ENST00000397251.3:c.187+1G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379974
  gene symbol: IL15RA
  hgvsc: ENST00000379974.1:n.404-3175G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380420
  ensembl transcript: ENST00000397246
  gene symbol: IL15RA
  hgvsc: ENST00000397246.3:c.175+2403G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435995
  ensembl transcript: ENST00000530685
  gene symbol: IL15RA
  hgvsc: ENST00000530685.1:c.283+2403G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380422
  ensembl transcript: ENST00000397250
  gene symbol: IL15RA
  hgvsc: ENST00000397250.2:c.89-3175G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000395113
  ensembl transcript: ENST00000429135
  gene symbol: IL15RA
  hgvsc: ENST00000429135.2:c.283+2403G>A
  variant of: http://identifiers.org/hgnc/5978
canonical: true
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2971
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3543
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 803
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.382+1G>A
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD

10-6005719-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6005719
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 6005719
    reference: chr 10
allele count: 1
allele frequency: 8.558566268978621e-6
allele num: 116842
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000534292
  gene symbol: IL15RA
  hgvsc: ENST00000534292.1:n.550C>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000431529
  ensembl transcript: ENST00000525219
  gene symbol: IL15RA
  hgvsc: ENST00000525219.2:c.261C>G
  hgvsp: ENST00000525219.2:c.261C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000532948
  gene symbol: IL15RA
  hgvsc: ENST00000532948.1:n.457+2389C>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380426
  ensembl transcript: ENST00000397255
  gene symbol: IL15RA
  hgvsc: ENST00000397255.3:c.369C>G
  hgvsp: ENST00000397255.3:c.369C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380421
  ensembl transcript: ENST00000397248
  gene symbol: IL15RA
  hgvsc: ENST00000397248.2:c.261C>G
  hgvsp: ENST00000397248.2:c.261C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380423
  ensembl transcript: ENST00000397251
  gene symbol: IL15RA
  hgvsc: ENST00000397251.3:c.174C>G
  hgvsp: ENST00000397251.3:c.174C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369312
  ensembl transcript: ENST00000379977
  gene symbol: IL15RA
  hgvsc: ENST00000379977.3:c.369C>G
  hgvsp: ENST00000379977.3:c.369C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435995
  ensembl transcript: ENST00000530685
  gene symbol: IL15RA
  hgvsc: ENST00000530685.1:c.283+2389C>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000405128
  ensembl transcript: ENST00000447291
  gene symbol: IL15RA
  hgvsc: ENST00000447291.1:c.77C>G
  hgvsp: ENST00000447291.1:c.77C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000405107
  ensembl transcript: ENST00000453922
  gene symbol: IL15RA
  hgvsc: ENST00000453922.1:c.258C>G
  hgvsp: ENST00000453922.1:c.258C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380422
  ensembl transcript: ENST00000397250
  gene symbol: IL15RA
  hgvsc: ENST00000397250.2:c.89-3189C>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379972
  gene symbol: IL15RA
  hgvsc: ENST00000379972.2:n.606+2389C>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435454
  ensembl transcript: ENST00000528354
  gene symbol: IL15RA
  hgvsc: ENST00000528354.1:c.283+2389C>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000432691
  ensembl transcript: ENST00000532039
  gene symbol: IL15RA
  hgvsc: ENST00000532039.1:c.195+2389C>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000395113
  ensembl transcript: ENST00000429135
  gene symbol: IL15RA
  hgvsc: ENST00000429135.2:c.283+2389C>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369306
  ensembl transcript: ENST00000379971
  gene symbol: IL15RA
  hgvsc: ENST00000379971.1:c.89-3189C>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379974
  gene symbol: IL15RA
  hgvsc: ENST00000379974.1:n.404-3189C>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380420
  ensembl transcript: ENST00000397246
  gene symbol: IL15RA
  hgvsc: ENST00000397246.3:c.175+2389C>G
  variant of: http://identifiers.org/hgnc/5978
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12051
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser123Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: South Asian
population: Other
reference allele: G
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum

10-6005720-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6005720
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 6005720
    reference: chr 10
allele count: 1
allele frequency: 8.555344523723971e-6
allele num: 116886
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379972
  gene symbol: IL15RA
  hgvsc: ENST00000379972.2:n.606+2388C>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000431529
  ensembl transcript: ENST00000525219
  gene symbol: IL15RA
  hgvsc: ENST00000525219.2:c.260C>A
  hgvsp: ENSP00000431529.2:p.Ser87Tyr
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000534292
  gene symbol: IL15RA
  hgvsc: ENST00000534292.1:n.549C>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369306
  ensembl transcript: ENST00000379971
  gene symbol: IL15RA
  hgvsc: ENST00000379971.1:c.89-3190C>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000405107
  ensembl transcript: ENST00000453922
  gene symbol: IL15RA
  hgvsc: ENST00000453922.1:c.257C>A
  hgvsp: ENSP00000405107.1:p.Ser86Tyr
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380422
  ensembl transcript: ENST00000397250
  gene symbol: IL15RA
  hgvsc: ENST00000397250.2:c.89-3190C>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380420
  ensembl transcript: ENST00000397246
  gene symbol: IL15RA
  hgvsc: ENST00000397246.3:c.175+2388C>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000395113
  ensembl transcript: ENST00000429135
  gene symbol: IL15RA
  hgvsc: ENST00000429135.2:c.283+2388C>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369312
  ensembl transcript: ENST00000379977
  gene symbol: IL15RA
  hgvsc: ENST00000379977.3:c.368C>A
  hgvsp: ENSP00000369312.3:p.Ser123Tyr
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000532948
  gene symbol: IL15RA
  hgvsc: ENST00000532948.1:n.457+2388C>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379974
  gene symbol: IL15RA
  hgvsc: ENST00000379974.1:n.404-3190C>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380421
  ensembl transcript: ENST00000397248
  gene symbol: IL15RA
  hgvsc: ENST00000397248.2:c.260C>A
  hgvsp: ENSP00000380421.2:p.Ser87Tyr
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000405128
  ensembl transcript: ENST00000447291
  gene symbol: IL15RA
  hgvsc: ENST00000447291.1:c.76C>A
  hgvsp: ENSP00000405128.1:p.Ser26Tyr
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380423
  ensembl transcript: ENST00000397251
  gene symbol: IL15RA
  hgvsc: ENST00000397251.3:c.173C>A
  hgvsp: ENSP00000380423.2:p.Ser58Tyr
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000432691
  ensembl transcript: ENST00000532039
  gene symbol: IL15RA
  hgvsc: ENST00000532039.1:c.195+2388C>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435995
  ensembl transcript: ENST00000530685
  gene symbol: IL15RA
  hgvsc: ENST00000530685.1:c.283+2388C>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435454
  ensembl transcript: ENST00000528354
  gene symbol: IL15RA
  hgvsc: ENST00000528354.1:c.283+2388C>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380426
  ensembl transcript: ENST00000397255
  gene symbol: IL15RA
  hgvsc: ENST00000397255.3:c.368C>A
  hgvsp: ENSP00000380426.3:p.Ser123Tyr
  variant of: http://identifiers.org/hgnc/5978
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1794
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 37663
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 837
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser123Tyr
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: G
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP

10-6005724-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6005724
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 6005724
    reference: chr 10
allele count: 1
allele frequency: 8.547885253188362e-6
allele num: 116988
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380421
  ensembl transcript: ENST00000397248
  gene symbol: IL15RA
  hgvsc: ENST00000397248.2:c.256C>T
  hgvsp: ENSP00000380421.2:p.Leu86Phe
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000405107
  ensembl transcript: ENST00000453922
  gene symbol: IL15RA
  hgvsc: ENST00000453922.1:c.253C>T
  hgvsp: ENSP00000405107.1:p.Leu85Phe
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000431529
  ensembl transcript: ENST00000525219
  gene symbol: IL15RA
  hgvsc: ENST00000525219.2:c.256C>T
  hgvsp: ENSP00000431529.2:p.Leu86Phe
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000395113
  ensembl transcript: ENST00000429135
  gene symbol: IL15RA
  hgvsc: ENST00000429135.2:c.283+2384C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000534292
  gene symbol: IL15RA
  hgvsc: ENST00000534292.1:n.545C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380426
  ensembl transcript: ENST00000397255
  gene symbol: IL15RA
  hgvsc: ENST00000397255.3:c.364C>T
  hgvsp: ENSP00000380426.3:p.Leu122Phe
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000432691
  ensembl transcript: ENST00000532039
  gene symbol: IL15RA
  hgvsc: ENST00000532039.1:c.195+2384C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435454
  ensembl transcript: ENST00000528354
  gene symbol: IL15RA
  hgvsc: ENST00000528354.1:c.283+2384C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000405128
  ensembl transcript: ENST00000447291
  gene symbol: IL15RA
  hgvsc: ENST00000447291.1:c.72C>T
  hgvsp: ENSP00000405128.1:p.Leu25Phe
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435995
  ensembl transcript: ENST00000530685
  gene symbol: IL15RA
  hgvsc: ENST00000530685.1:c.283+2384C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380422
  ensembl transcript: ENST00000397250
  gene symbol: IL15RA
  hgvsc: ENST00000397250.2:c.89-3194C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369312
  ensembl transcript: ENST00000379977
  gene symbol: IL15RA
  hgvsc: ENST00000379977.3:c.364C>T
  hgvsp: ENSP00000369312.3:p.Leu122Phe
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379972
  gene symbol: IL15RA
  hgvsc: ENST00000379972.2:n.606+2384C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379974
  gene symbol: IL15RA
  hgvsc: ENST00000379974.1:n.404-3194C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380423
  ensembl transcript: ENST00000397251
  gene symbol: IL15RA
  hgvsc: ENST00000397251.3:c.169C>T
  hgvsp: ENSP00000380423.2:p.Leu57Phe
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380420
  ensembl transcript: ENST00000397246
  gene symbol: IL15RA
  hgvsc: ENST00000397246.3:c.175+2384C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000532948
  gene symbol: IL15RA
  hgvsc: ENST00000532948.1:n.457+2384C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369306
  ensembl transcript: ENST00000379971
  gene symbol: IL15RA
  hgvsc: ENST00000379971.1:c.89-3194C>T
  variant of: http://identifiers.org/hgnc/5978
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2154
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1748
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 846
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12278
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu122Phe
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
reference allele: G
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS

10-6005727-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6005727
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 6005727
    reference: chr 10
allele count: 9
allele frequency: 7.686526373326045e-5
allele num: 117088
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380426
  ensembl transcript: ENST00000397255
  gene symbol: IL15RA
  hgvsc: ENST00000397255.3:c.361A>G
  hgvsp: ENSP00000380426.3:p.Ser121Gly
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000431529
  ensembl transcript: ENST00000525219
  gene symbol: IL15RA
  hgvsc: ENST00000525219.2:c.253A>G
  hgvsp: ENSP00000431529.2:p.Ser85Gly
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380422
  ensembl transcript: ENST00000397250
  gene symbol: IL15RA
  hgvsc: ENST00000397250.2:c.89-3197A>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369306
  ensembl transcript: ENST00000379971
  gene symbol: IL15RA
  hgvsc: ENST00000379971.1:c.89-3197A>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379972
  gene symbol: IL15RA
  hgvsc: ENST00000379972.2:n.606+2381A>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000532948
  gene symbol: IL15RA
  hgvsc: ENST00000532948.1:n.457+2381A>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369312
  ensembl transcript: ENST00000379977
  gene symbol: IL15RA
  hgvsc: ENST00000379977.3:c.361A>G
  hgvsp: ENSP00000369312.3:p.Ser121Gly
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000534292
  gene symbol: IL15RA
  hgvsc: ENST00000534292.1:n.542A>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380421
  ensembl transcript: ENST00000397248
  gene symbol: IL15RA
  hgvsc: ENST00000397248.2:c.253A>G
  hgvsp: ENSP00000380421.2:p.Ser85Gly
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435454
  ensembl transcript: ENST00000528354
  gene symbol: IL15RA
  hgvsc: ENST00000528354.1:c.283+2381A>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380423
  ensembl transcript: ENST00000397251
  gene symbol: IL15RA
  hgvsc: ENST00000397251.3:c.166A>G
  hgvsp: ENSP00000380423.2:p.Ser56Gly
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000405128
  ensembl transcript: ENST00000447291
  gene symbol: IL15RA
  hgvsc: ENST00000447291.1:c.69A>G
  hgvsp: ENSP00000405128.1:p.Ser24Gly
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000405107
  ensembl transcript: ENST00000453922
  gene symbol: IL15RA
  hgvsc: ENST00000453922.1:c.250A>G
  hgvsp: ENSP00000405107.1:p.Ser84Gly
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000395113
  ensembl transcript: ENST00000429135
  gene symbol: IL15RA
  hgvsc: ENST00000429135.2:c.283+2381A>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435995
  ensembl transcript: ENST00000530685
  gene symbol: IL15RA
  hgvsc: ENST00000530685.1:c.283+2381A>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380420
  ensembl transcript: ENST00000397246
  gene symbol: IL15RA
  hgvsc: ENST00000397246.3:c.175+2381A>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000432691
  ensembl transcript: ENST00000532039
  gene symbol: IL15RA
  hgvsc: ENST00000532039.1:c.195+2381A>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379974
  gene symbol: IL15RA
  hgvsc: ENST00000379974.1:n.404-3197A>G
  variant of: http://identifiers.org/hgnc/5978
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12430
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Ser121Gly
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: QD

http://identifiers.org/exac.variant/10-6005730-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6005730
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 6005730
    reference: chr 10
allele count: 1
allele frequency: 8.537085097664253e-6
allele num: 117136
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000532948
  gene symbol: IL15RA
  hgvsc: ENST00000532948.1:n.457+2378G>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379972
  gene symbol: IL15RA
  hgvsc: ENST00000379972.2:n.606+2378G>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369312
  ensembl transcript: ENST00000379977
  gene symbol: IL15RA
  hgvsc: ENST00000379977.3:c.358G>T
  hgvsp: ENSP00000369312.3:p.Glu120Ter
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000431529
  ensembl transcript: ENST00000525219
  gene symbol: IL15RA
  hgvsc: ENST00000525219.2:c.250G>T
  hgvsp: ENSP00000431529.2:p.Glu84Ter
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369306
  ensembl transcript: ENST00000379971
  gene symbol: IL15RA
  hgvsc: ENST00000379971.1:c.89-3200G>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435454
  ensembl transcript: ENST00000528354
  gene symbol: IL15RA
  hgvsc: ENST00000528354.1:c.283+2378G>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380420
  ensembl transcript: ENST00000397246
  gene symbol: IL15RA
  hgvsc: ENST00000397246.3:c.175+2378G>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000432691
  ensembl transcript: ENST00000532039
  gene symbol: IL15RA
  hgvsc: ENST00000532039.1:c.195+2378G>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000405107
  ensembl transcript: ENST00000453922
  gene symbol: IL15RA
  hgvsc: ENST00000453922.1:c.247G>T
  hgvsp: ENSP00000405107.1:p.Glu83Ter
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380423
  ensembl transcript: ENST00000397251
  gene symbol: IL15RA
  hgvsc: ENST00000397251.3:c.163G>T
  hgvsp: ENSP00000380423.2:p.Glu55Ter
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435995
  ensembl transcript: ENST00000530685
  gene symbol: IL15RA
  hgvsc: ENST00000530685.1:c.283+2378G>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380422
  ensembl transcript: ENST00000397250
  gene symbol: IL15RA
  hgvsc: ENST00000397250.2:c.89-3200G>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380421
  ensembl transcript: ENST00000397248
  gene symbol: IL15RA
  hgvsc: ENST00000397248.2:c.250G>T
  hgvsp: ENSP00000380421.2:p.Glu84Ter
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000405128
  ensembl transcript: ENST00000447291
  gene symbol: IL15RA
  hgvsc: ENST00000447291.1:c.66G>T
  hgvsp: ENSP00000405128.1:p.Glu23Ter
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000534292
  gene symbol: IL15RA
  hgvsc: ENST00000534292.1:n.539G>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379974
  gene symbol: IL15RA
  hgvsc: ENST00000379974.1:n.404-3200G>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380426
  ensembl transcript: ENST00000397255
  gene symbol: IL15RA
  hgvsc: ENST00000397255.3:c.358G>T
  hgvsp: ENSP00000380426.3:p.Glu120Ter
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000395113
  ensembl transcript: ENST00000429135
  gene symbol: IL15RA
  hgvsc: ENST00000429135.2:c.283+2378G>T
  variant of: http://identifiers.org/hgnc/5978
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 853
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu120Ter
num of homozygotes: 0
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff

10-6005732-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6005732
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 6005732
    reference: chr 10
allele count: 1
allele frequency: 8.53373384990869e-6
allele num: 117182
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000405107
  ensembl transcript: ENST00000453922
  gene symbol: IL15RA
  hgvsc: ENST00000453922.1:c.245C>T
  hgvsp: ENSP00000405107.1:p.Pro82Leu
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000405128
  ensembl transcript: ENST00000447291
  gene symbol: IL15RA
  hgvsc: ENST00000447291.1:c.64C>T
  hgvsp: ENSP00000405128.1:p.Pro22Leu
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379972
  gene symbol: IL15RA
  hgvsc: ENST00000379972.2:n.606+2376C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380421
  ensembl transcript: ENST00000397248
  gene symbol: IL15RA
  hgvsc: ENST00000397248.2:c.248C>T
  hgvsp: ENSP00000380421.2:p.Pro83Leu
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000532948
  gene symbol: IL15RA
  hgvsc: ENST00000532948.1:n.457+2376C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380420
  ensembl transcript: ENST00000397246
  gene symbol: IL15RA
  hgvsc: ENST00000397246.3:c.175+2376C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379974
  gene symbol: IL15RA
  hgvsc: ENST00000379974.1:n.404-3202C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000432691
  ensembl transcript: ENST00000532039
  gene symbol: IL15RA
  hgvsc: ENST00000532039.1:c.195+2376C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380423
  ensembl transcript: ENST00000397251
  gene symbol: IL15RA
  hgvsc: ENST00000397251.3:c.161C>T
  hgvsp: ENSP00000380423.2:p.Pro54Leu
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369312
  ensembl transcript: ENST00000379977
  gene symbol: IL15RA
  hgvsc: ENST00000379977.3:c.356C>T
  hgvsp: ENSP00000369312.3:p.Pro119Leu
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435454
  ensembl transcript: ENST00000528354
  gene symbol: IL15RA
  hgvsc: ENST00000528354.1:c.283+2376C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380422
  ensembl transcript: ENST00000397250
  gene symbol: IL15RA
  hgvsc: ENST00000397250.2:c.89-3202C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369306
  ensembl transcript: ENST00000379971
  gene symbol: IL15RA
  hgvsc: ENST00000379971.1:c.89-3202C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380426
  ensembl transcript: ENST00000397255
  gene symbol: IL15RA
  hgvsc: ENST00000397255.3:c.356C>T
  hgvsp: ENSP00000380426.3:p.Pro119Leu
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000431529
  ensembl transcript: ENST00000525219
  gene symbol: IL15RA
  hgvsc: ENST00000525219.2:c.248C>T
  hgvsp: ENSP00000431529.2:p.Pro83Leu
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000534292
  gene symbol: IL15RA
  hgvsc: ENST00000534292.1:n.537C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000395113
  ensembl transcript: ENST00000429135
  gene symbol: IL15RA
  hgvsc: ENST00000429135.2:c.283+2376C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435995
  ensembl transcript: ENST00000530685
  gene symbol: IL15RA
  hgvsc: ENST00000530685.1:c.283+2376C>T
  variant of: http://identifiers.org/hgnc/5978
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro119Leu
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD

10-6005741-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6005741
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 6005741
    reference: chr 10
allele count: 4
allele frequency: 3.417693398725201e-5
allele num: 117038
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380421
  ensembl transcript: ENST00000397248
  gene symbol: IL15RA
  hgvsc: ENST00000397248.2:c.239C>T
  hgvsp: ENSP00000380421.2:p.Thr80Ile
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000532948
  gene symbol: IL15RA
  hgvsc: ENST00000532948.1:n.457+2367C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369312
  ensembl transcript: ENST00000379977
  gene symbol: IL15RA
  hgvsc: ENST00000379977.3:c.347C>T
  hgvsp: ENSP00000369312.3:p.Thr116Ile
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000405128
  ensembl transcript: ENST00000447291
  gene symbol: IL15RA
  hgvsc: ENST00000447291.1:c.55C>T
  hgvsp: ENSP00000405128.1:p.Thr19Ile
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369306
  ensembl transcript: ENST00000379971
  gene symbol: IL15RA
  hgvsc: ENST00000379971.1:c.89-3211C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000405107
  ensembl transcript: ENST00000453922
  gene symbol: IL15RA
  hgvsc: ENST00000453922.1:c.236C>T
  hgvsp: ENSP00000405107.1:p.Thr79Ile
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379972
  gene symbol: IL15RA
  hgvsc: ENST00000379972.2:n.606+2367C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000431529
  ensembl transcript: ENST00000525219
  gene symbol: IL15RA
  hgvsc: ENST00000525219.2:c.239C>T
  hgvsp: ENSP00000431529.2:p.Thr80Ile
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435454
  ensembl transcript: ENST00000528354
  gene symbol: IL15RA
  hgvsc: ENST00000528354.1:c.283+2367C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380422
  ensembl transcript: ENST00000397250
  gene symbol: IL15RA
  hgvsc: ENST00000397250.2:c.89-3211C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380420
  ensembl transcript: ENST00000397246
  gene symbol: IL15RA
  hgvsc: ENST00000397246.3:c.175+2367C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379974
  gene symbol: IL15RA
  hgvsc: ENST00000379974.1:n.404-3211C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000432691
  ensembl transcript: ENST00000532039
  gene symbol: IL15RA
  hgvsc: ENST00000532039.1:c.195+2367C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000534292
  gene symbol: IL15RA
  hgvsc: ENST00000534292.1:n.528C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380426
  ensembl transcript: ENST00000397255
  gene symbol: IL15RA
  hgvsc: ENST00000397255.3:c.347C>T
  hgvsp: ENSP00000380426.3:p.Thr116Ile
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000395113
  ensembl transcript: ENST00000429135
  gene symbol: IL15RA
  hgvsc: ENST00000429135.2:c.283+2367C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435995
  ensembl transcript: ENST00000530685
  gene symbol: IL15RA
  hgvsc: ENST00000530685.1:c.283+2367C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380423
  ensembl transcript: ENST00000397251
  gene symbol: IL15RA
  hgvsc: ENST00000397251.3:c.152C>T
  hgvsp: ENSP00000380423.2:p.Thr51Ile
  variant of: http://identifiers.org/hgnc/5978
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 36631
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2767
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr116Ile
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: DP

http://identifiers.org/exac.variant/10-6005744-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6005744
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 6005744
    reference: chr 10
allele count: 9
allele frequency: 7.745666729779506e-5
allele num: 116194
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380422
  ensembl transcript: ENST00000397250
  gene symbol: IL15RA
  hgvsc: ENST00000397250.2:c.89-3214T>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000534292
  gene symbol: IL15RA
  hgvsc: ENST00000534292.1:n.525T>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000395113
  ensembl transcript: ENST00000429135
  gene symbol: IL15RA
  hgvsc: ENST00000429135.2:c.283+2364T>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380421
  ensembl transcript: ENST00000397248
  gene symbol: IL15RA
  hgvsc: ENST00000397248.2:c.236T>G
  hgvsp: ENSP00000380421.2:p.Val79Gly
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380423
  ensembl transcript: ENST00000397251
  gene symbol: IL15RA
  hgvsc: ENST00000397251.3:c.149T>G
  hgvsp: ENSP00000380423.2:p.Val50Gly
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379972
  gene symbol: IL15RA
  hgvsc: ENST00000379972.2:n.606+2364T>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379974
  gene symbol: IL15RA
  hgvsc: ENST00000379974.1:n.404-3214T>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435995
  ensembl transcript: ENST00000530685
  gene symbol: IL15RA
  hgvsc: ENST00000530685.1:c.283+2364T>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000405107
  ensembl transcript: ENST00000453922
  gene symbol: IL15RA
  hgvsc: ENST00000453922.1:c.233T>G
  hgvsp: ENSP00000405107.1:p.Val78Gly
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000532948
  gene symbol: IL15RA
  hgvsc: ENST00000532948.1:n.457+2364T>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435454
  ensembl transcript: ENST00000528354
  gene symbol: IL15RA
  hgvsc: ENST00000528354.1:c.283+2364T>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000431529
  ensembl transcript: ENST00000525219
  gene symbol: IL15RA
  hgvsc: ENST00000525219.2:c.236T>G
  hgvsp: ENSP00000431529.2:p.Val79Gly
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380426
  ensembl transcript: ENST00000397255
  gene symbol: IL15RA
  hgvsc: ENST00000397255.3:c.344T>G
  hgvsp: ENSP00000380426.3:p.Val115Gly
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369312
  ensembl transcript: ENST00000379977
  gene symbol: IL15RA
  hgvsc: ENST00000379977.3:c.344T>G
  hgvsp: ENSP00000369312.3:p.Val115Gly
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000405128
  ensembl transcript: ENST00000447291
  gene symbol: IL15RA
  hgvsc: ENST00000447291.1:c.52T>G
  hgvsp: ENSP00000405128.1:p.Val18Gly
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369306
  ensembl transcript: ENST00000379971
  gene symbol: IL15RA
  hgvsc: ENST00000379971.1:c.89-3214T>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000432691
  ensembl transcript: ENST00000532039
  gene symbol: IL15RA
  hgvsc: ENST00000532039.1:c.195+2364T>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380420
  ensembl transcript: ENST00000397246
  gene symbol: IL15RA
  hgvsc: ENST00000397246.3:c.175+2364T>G
  variant of: http://identifiers.org/hgnc/5978
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.90to99.95
genotype depth: GenotypeDepth
  all individuals: 1851
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2238
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val115Gly
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
reference allele: A
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD

http://identifiers.org/exac.variant/10-6005745-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6005745
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 6005745
    reference: chr 10
allele count: 63
allele frequency: 5.404199835300576e-4
allele num: 116576
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380422
  ensembl transcript: ENST00000397250
  gene symbol: IL15RA
  hgvsc: ENST00000397250.2:c.89-3215G>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380421
  ensembl transcript: ENST00000397248
  gene symbol: IL15RA
  hgvsc: ENST00000397248.2:c.235G>T
  hgvsp: ENSP00000380421.2:p.Val79Leu
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000532948
  gene symbol: IL15RA
  hgvsc: ENST00000532948.1:n.457+2363G>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369306
  ensembl transcript: ENST00000379971
  gene symbol: IL15RA
  hgvsc: ENST00000379971.1:c.89-3215G>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000534292
  gene symbol: IL15RA
  hgvsc: ENST00000534292.1:n.524G>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380423
  ensembl transcript: ENST00000397251
  gene symbol: IL15RA
  hgvsc: ENST00000397251.3:c.148G>T
  hgvsp: ENSP00000380423.2:p.Val50Leu
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000432691
  ensembl transcript: ENST00000532039
  gene symbol: IL15RA
  hgvsc: ENST00000532039.1:c.195+2363G>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369312
  ensembl transcript: ENST00000379977
  gene symbol: IL15RA
  hgvsc: ENST00000379977.3:c.343G>T
  hgvsp: ENSP00000369312.3:p.Val115Leu
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000395113
  ensembl transcript: ENST00000429135
  gene symbol: IL15RA
  hgvsc: ENST00000429135.2:c.283+2363G>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380420
  ensembl transcript: ENST00000397246
  gene symbol: IL15RA
  hgvsc: ENST00000397246.3:c.175+2363G>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000405107
  ensembl transcript: ENST00000453922
  gene symbol: IL15RA
  hgvsc: ENST00000453922.1:c.232G>T
  hgvsp: ENSP00000405107.1:p.Val78Leu
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000431529
  ensembl transcript: ENST00000525219
  gene symbol: IL15RA
  hgvsc: ENST00000525219.2:c.235G>T
  hgvsp: ENSP00000431529.2:p.Val79Leu
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435995
  ensembl transcript: ENST00000530685
  gene symbol: IL15RA
  hgvsc: ENST00000530685.1:c.283+2363G>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435454
  ensembl transcript: ENST00000528354
  gene symbol: IL15RA
  hgvsc: ENST00000528354.1:c.283+2363G>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379972
  gene symbol: IL15RA
  hgvsc: ENST00000379972.2:n.606+2363G>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000405128
  ensembl transcript: ENST00000447291
  gene symbol: IL15RA
  hgvsc: ENST00000447291.1:c.51G>T
  hgvsp: ENSP00000405128.1:p.Val18Leu
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380426
  ensembl transcript: ENST00000397255
  gene symbol: IL15RA
  hgvsc: ENST00000397255.3:c.343G>T
  hgvsp: ENSP00000380426.3:p.Val115Leu
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379974
  gene symbol: IL15RA
  hgvsc: ENST00000379974.1:n.404-3215G>T
  variant of: http://identifiers.org/hgnc/5978
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 849
  bin: 3.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 4.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 35601
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val115Leu
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: Other
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum

http://identifiers.org/exac.variant/10-6005747-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6005747
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 6005747
    reference: chr 10
allele count: 2
allele frequency: 1.716826617679881e-5
allele num: 116494
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000431529
  ensembl transcript: ENST00000525219
  gene symbol: IL15RA
  hgvsc: ENST00000525219.2:c.233G>T
  hgvsp: ENSP00000431529.2:p.Gly78Val
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000405107
  ensembl transcript: ENST00000453922
  gene symbol: IL15RA
  hgvsc: ENST00000453922.1:c.230G>T
  hgvsp: ENSP00000405107.1:p.Gly77Val
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000395113
  ensembl transcript: ENST00000429135
  gene symbol: IL15RA
  hgvsc: ENST00000429135.2:c.283+2361G>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380423
  ensembl transcript: ENST00000397251
  gene symbol: IL15RA
  hgvsc: ENST00000397251.3:c.146G>T
  hgvsp: ENSP00000380423.2:p.Gly49Val
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435995
  ensembl transcript: ENST00000530685
  gene symbol: IL15RA
  hgvsc: ENST00000530685.1:c.283+2361G>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000405128
  ensembl transcript: ENST00000447291
  gene symbol: IL15RA
  hgvsc: ENST00000447291.1:c.49G>T
  hgvsp: ENSP00000405128.1:p.Gly17Val
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369312
  ensembl transcript: ENST00000379977
  gene symbol: IL15RA
  hgvsc: ENST00000379977.3:c.341G>T
  hgvsp: ENSP00000369312.3:p.Gly114Val
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000534292
  gene symbol: IL15RA
  hgvsc: ENST00000534292.1:n.522G>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380426
  ensembl transcript: ENST00000397255
  gene symbol: IL15RA
  hgvsc: ENST00000397255.3:c.341G>T
  hgvsp: ENSP00000380426.3:p.Gly114Val
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379974
  gene symbol: IL15RA
  hgvsc: ENST00000379974.1:n.404-3217G>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369306
  ensembl transcript: ENST00000379971
  gene symbol: IL15RA
  hgvsc: ENST00000379971.1:c.89-3217G>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380421
  ensembl transcript: ENST00000397248
  gene symbol: IL15RA
  hgvsc: ENST00000397248.2:c.233G>T
  hgvsp: ENSP00000380421.2:p.Gly78Val
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000432691
  ensembl transcript: ENST00000532039
  gene symbol: IL15RA
  hgvsc: ENST00000532039.1:c.195+2361G>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379972
  gene symbol: IL15RA
  hgvsc: ENST00000379972.2:n.606+2361G>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380422
  ensembl transcript: ENST00000397250
  gene symbol: IL15RA
  hgvsc: ENST00000397250.2:c.89-3217G>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000532948
  gene symbol: IL15RA
  hgvsc: ENST00000532948.1:n.457+2361G>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435454
  ensembl transcript: ENST00000528354
  gene symbol: IL15RA
  hgvsc: ENST00000528354.1:c.283+2361G>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380420
  ensembl transcript: ENST00000397246
  gene symbol: IL15RA
  hgvsc: ENST00000397246.3:c.175+2361G>T
  variant of: http://identifiers.org/hgnc/5978
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35524
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 843
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly114Val
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: European (Finnish)
population: Other
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS

http://identifiers.org/exac.variant/10-6005752-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6005752
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 6005752
    reference: chr 10
allele count: 2
allele frequency: 1.727652810891123e-5
allele num: 115764
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369312
  ensembl transcript: ENST00000379977
  gene symbol: IL15RA
  hgvsc: ENST00000379977.3:c.336G>T
  hgvsp: ENST00000379977.3:c.336G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000532948
  gene symbol: IL15RA
  hgvsc: ENST00000532948.1:n.457+2356G>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380426
  ensembl transcript: ENST00000397255
  gene symbol: IL15RA
  hgvsc: ENST00000397255.3:c.336G>T
  hgvsp: ENST00000397255.3:c.336G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380421
  ensembl transcript: ENST00000397248
  gene symbol: IL15RA
  hgvsc: ENST00000397248.2:c.228G>T
  hgvsp: ENST00000397248.2:c.228G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369306
  ensembl transcript: ENST00000379971
  gene symbol: IL15RA
  hgvsc: ENST00000379971.1:c.89-3222G>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435995
  ensembl transcript: ENST00000530685
  gene symbol: IL15RA
  hgvsc: ENST00000530685.1:c.283+2356G>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000432691
  ensembl transcript: ENST00000532039
  gene symbol: IL15RA
  hgvsc: ENST00000532039.1:c.195+2356G>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000534292
  gene symbol: IL15RA
  hgvsc: ENST00000534292.1:n.517G>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000431529
  ensembl transcript: ENST00000525219
  gene symbol: IL15RA
  hgvsc: ENST00000525219.2:c.228G>T
  hgvsp: ENST00000525219.2:c.228G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435454
  ensembl transcript: ENST00000528354
  gene symbol: IL15RA
  hgvsc: ENST00000528354.1:c.283+2356G>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000405107
  ensembl transcript: ENST00000453922
  gene symbol: IL15RA
  hgvsc: ENST00000453922.1:c.225G>T
  hgvsp: ENST00000453922.1:c.225G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380423
  ensembl transcript: ENST00000397251
  gene symbol: IL15RA
  hgvsc: ENST00000397251.3:c.141G>T
  hgvsp: ENST00000397251.3:c.141G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000395113
  ensembl transcript: ENST00000429135
  gene symbol: IL15RA
  hgvsc: ENST00000429135.2:c.283+2356G>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380420
  ensembl transcript: ENST00000397246
  gene symbol: IL15RA
  hgvsc: ENST00000397246.3:c.175+2356G>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379972
  gene symbol: IL15RA
  hgvsc: ENST00000379972.2:n.606+2356G>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379974
  gene symbol: IL15RA
  hgvsc: ENST00000379974.1:n.404-3222G>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000405128
  ensembl transcript: ENST00000447291
  gene symbol: IL15RA
  hgvsc: ENST00000447291.1:c.44G>T
  hgvsp: ENST00000447291.1:c.44G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380422
  ensembl transcript: ENST00000397250
  gene symbol: IL15RA
  hgvsc: ENST00000397250.2:c.89-3222G>T
  variant of: http://identifiers.org/hgnc/5978
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2835
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2734
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr112Thr
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
population: African
reference allele: C
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD

10-6005752-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6005752
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 6005752
    reference: chr 10
allele count: 2
allele frequency: 1.727652810891123e-5
allele num: 115764
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380426
  ensembl transcript: ENST00000397255
  gene symbol: IL15RA
  hgvsc: ENST00000397255.3:c.336G>A
  hgvsp: ENST00000397255.3:c.336G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435454
  ensembl transcript: ENST00000528354
  gene symbol: IL15RA
  hgvsc: ENST00000528354.1:c.283+2356G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369312
  ensembl transcript: ENST00000379977
  gene symbol: IL15RA
  hgvsc: ENST00000379977.3:c.336G>A
  hgvsp: ENST00000379977.3:c.336G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380421
  ensembl transcript: ENST00000397248
  gene symbol: IL15RA
  hgvsc: ENST00000397248.2:c.228G>A
  hgvsp: ENST00000397248.2:c.228G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000395113
  ensembl transcript: ENST00000429135
  gene symbol: IL15RA
  hgvsc: ENST00000429135.2:c.283+2356G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000405128
  ensembl transcript: ENST00000447291
  gene symbol: IL15RA
  hgvsc: ENST00000447291.1:c.44G>A
  hgvsp: ENST00000447291.1:c.44G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000431529
  ensembl transcript: ENST00000525219
  gene symbol: IL15RA
  hgvsc: ENST00000525219.2:c.228G>A
  hgvsp: ENST00000525219.2:c.228G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379972
  gene symbol: IL15RA
  hgvsc: ENST00000379972.2:n.606+2356G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379974
  gene symbol: IL15RA
  hgvsc: ENST00000379974.1:n.404-3222G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435995
  ensembl transcript: ENST00000530685
  gene symbol: IL15RA
  hgvsc: ENST00000530685.1:c.283+2356G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000532948
  gene symbol: IL15RA
  hgvsc: ENST00000532948.1:n.457+2356G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000534292
  gene symbol: IL15RA
  hgvsc: ENST00000534292.1:n.517G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000432691
  ensembl transcript: ENST00000532039
  gene symbol: IL15RA
  hgvsc: ENST00000532039.1:c.195+2356G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000405107
  ensembl transcript: ENST00000453922
  gene symbol: IL15RA
  hgvsc: ENST00000453922.1:c.225G>A
  hgvsp: ENST00000453922.1:c.225G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380423
  ensembl transcript: ENST00000397251
  gene symbol: IL15RA
  hgvsc: ENST00000397251.3:c.141G>A
  hgvsp: ENST00000397251.3:c.141G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380420
  ensembl transcript: ENST00000397246
  gene symbol: IL15RA
  hgvsc: ENST00000397246.3:c.175+2356G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380422
  ensembl transcript: ENST00000397250
  gene symbol: IL15RA
  hgvsc: ENST00000397250.2:c.89-3222G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369306
  ensembl transcript: ENST00000379971
  gene symbol: IL15RA
  hgvsc: ENST00000379971.1:c.89-3222G>A
  variant of: http://identifiers.org/hgnc/5978
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2734
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2184
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr112Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: Other
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: QD

10-6005753-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6005753
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 6005753
    reference: chr 10
allele count: 17
allele frequency: 1.471020888496617e-4
allele num: 115566
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435454
  ensembl transcript: ENST00000528354
  gene symbol: IL15RA
  hgvsc: ENST00000528354.1:c.283+2355C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000534292
  gene symbol: IL15RA
  hgvsc: ENST00000534292.1:n.516C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380420
  ensembl transcript: ENST00000397246
  gene symbol: IL15RA
  hgvsc: ENST00000397246.3:c.175+2355C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380426
  ensembl transcript: ENST00000397255
  gene symbol: IL15RA
  hgvsc: ENST00000397255.3:c.335C>T
  hgvsp: ENSP00000380426.3:p.Thr112Met
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380421
  ensembl transcript: ENST00000397248
  gene symbol: IL15RA
  hgvsc: ENST00000397248.2:c.227C>T
  hgvsp: ENSP00000380421.2:p.Thr76Met
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380422
  ensembl transcript: ENST00000397250
  gene symbol: IL15RA
  hgvsc: ENST00000397250.2:c.89-3223C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380423
  ensembl transcript: ENST00000397251
  gene symbol: IL15RA
  hgvsc: ENST00000397251.3:c.140C>T
  hgvsp: ENSP00000380423.2:p.Thr47Met
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000432691
  ensembl transcript: ENST00000532039
  gene symbol: IL15RA
  hgvsc: ENST00000532039.1:c.195+2355C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379974
  gene symbol: IL15RA
  hgvsc: ENST00000379974.1:n.404-3223C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000405107
  ensembl transcript: ENST00000453922
  gene symbol: IL15RA
  hgvsc: ENST00000453922.1:c.224C>T
  hgvsp: ENSP00000405107.1:p.Thr75Met
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435995
  ensembl transcript: ENST00000530685
  gene symbol: IL15RA
  hgvsc: ENST00000530685.1:c.283+2355C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000395113
  ensembl transcript: ENST00000429135
  gene symbol: IL15RA
  hgvsc: ENST00000429135.2:c.283+2355C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369306
  ensembl transcript: ENST00000379971
  gene symbol: IL15RA
  hgvsc: ENST00000379971.1:c.89-3223C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000532948
  gene symbol: IL15RA
  hgvsc: ENST00000532948.1:n.457+2355C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000431529
  ensembl transcript: ENST00000525219
  gene symbol: IL15RA
  hgvsc: ENST00000525219.2:c.227C>T
  hgvsp: ENSP00000431529.2:p.Thr76Met
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369312
  ensembl transcript: ENST00000379977
  gene symbol: IL15RA
  hgvsc: ENST00000379977.3:c.335C>T
  hgvsp: ENSP00000369312.3:p.Thr112Met
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000405128
  ensembl transcript: ENST00000447291
  gene symbol: IL15RA
  hgvsc: ENST00000447291.1:c.43C>T
  hgvsp: ENSP00000405128.1:p.Thr15Met
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379972
  gene symbol: IL15RA
  hgvsc: ENST00000379972.2:n.606+2355C>T
  variant of: http://identifiers.org/hgnc/5978
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 34433
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2842
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2318
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Thr112Met
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: DP

10-6005755-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6005755
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 6005755
    reference: chr 10
allele count: 2
allele frequency: 1.73259178404976e-5
allele num: 115434
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369312
  ensembl transcript: ENST00000379977
  gene symbol: IL15RA
  hgvsc: ENST00000379977.3:c.333G>A
  hgvsp: ENST00000379977.3:c.333G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379972
  gene symbol: IL15RA
  hgvsc: ENST00000379972.2:n.606+2353G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380420
  ensembl transcript: ENST00000397246
  gene symbol: IL15RA
  hgvsc: ENST00000397246.3:c.175+2353G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380423
  ensembl transcript: ENST00000397251
  gene symbol: IL15RA
  hgvsc: ENST00000397251.3:c.138G>A
  hgvsp: ENST00000397251.3:c.138G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000405107
  ensembl transcript: ENST00000453922
  gene symbol: IL15RA
  hgvsc: ENST00000453922.1:c.222G>A
  hgvsp: ENST00000453922.1:c.222G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379974
  gene symbol: IL15RA
  hgvsc: ENST00000379974.1:n.404-3225G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000431529
  ensembl transcript: ENST00000525219
  gene symbol: IL15RA
  hgvsc: ENST00000525219.2:c.225G>A
  hgvsp: ENST00000525219.2:c.225G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435995
  ensembl transcript: ENST00000530685
  gene symbol: IL15RA
  hgvsc: ENST00000530685.1:c.283+2353G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435454
  ensembl transcript: ENST00000528354
  gene symbol: IL15RA
  hgvsc: ENST00000528354.1:c.283+2353G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000432691
  ensembl transcript: ENST00000532039
  gene symbol: IL15RA
  hgvsc: ENST00000532039.1:c.195+2353G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000405128
  ensembl transcript: ENST00000447291
  gene symbol: IL15RA
  hgvsc: ENST00000447291.1:c.41G>A
  hgvsp: ENST00000447291.1:c.41G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380426
  ensembl transcript: ENST00000397255
  gene symbol: IL15RA
  hgvsc: ENST00000397255.3:c.333G>A
  hgvsp: ENST00000397255.3:c.333G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369306
  ensembl transcript: ENST00000379971
  gene symbol: IL15RA
  hgvsc: ENST00000379971.1:c.89-3225G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380422
  ensembl transcript: ENST00000397250
  gene symbol: IL15RA
  hgvsc: ENST00000397250.2:c.89-3225G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380421
  ensembl transcript: ENST00000397248
  gene symbol: IL15RA
  hgvsc: ENST00000397248.2:c.225G>A
  hgvsp: ENST00000397248.2:c.225G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000532948
  gene symbol: IL15RA
  hgvsc: ENST00000532948.1:n.457+2353G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000395113
  ensembl transcript: ENST00000429135
  gene symbol: IL15RA
  hgvsc: ENST00000429135.2:c.283+2353G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000534292
  gene symbol: IL15RA
  hgvsc: ENST00000534292.1:n.514G>A
  variant of: http://identifiers.org/hgnc/5978
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 34332
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 464
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2819
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Thr111Thr
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: QD

10-6005756-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6005756
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 6005756
    reference: chr 10
allele count: 474
allele frequency: 4.111442647977239e-3
allele num: 115288
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380426
  ensembl transcript: ENST00000397255
  gene symbol: IL15RA
  hgvsc: ENST00000397255.3:c.332C>T
  hgvsp: ENSP00000380426.3:p.Thr111Met
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369306
  ensembl transcript: ENST00000379971
  gene symbol: IL15RA
  hgvsc: ENST00000379971.1:c.89-3226C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379974
  gene symbol: IL15RA
  hgvsc: ENST00000379974.1:n.404-3226C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380421
  ensembl transcript: ENST00000397248
  gene symbol: IL15RA
  hgvsc: ENST00000397248.2:c.224C>T
  hgvsp: ENSP00000380421.2:p.Thr75Met
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435995
  ensembl transcript: ENST00000530685
  gene symbol: IL15RA
  hgvsc: ENST00000530685.1:c.283+2352C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000432691
  ensembl transcript: ENST00000532039
  gene symbol: IL15RA
  hgvsc: ENST00000532039.1:c.195+2352C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380420
  ensembl transcript: ENST00000397246
  gene symbol: IL15RA
  hgvsc: ENST00000397246.3:c.175+2352C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380422
  ensembl transcript: ENST00000397250
  gene symbol: IL15RA
  hgvsc: ENST00000397250.2:c.89-3226C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000405128
  ensembl transcript: ENST00000447291
  gene symbol: IL15RA
  hgvsc: ENST00000447291.1:c.40C>T
  hgvsp: ENSP00000405128.1:p.Thr14Met
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435454
  ensembl transcript: ENST00000528354
  gene symbol: IL15RA
  hgvsc: ENST00000528354.1:c.283+2352C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000405107
  ensembl transcript: ENST00000453922
  gene symbol: IL15RA
  hgvsc: ENST00000453922.1:c.221C>T
  hgvsp: ENSP00000405107.1:p.Thr74Met
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000532948
  gene symbol: IL15RA
  hgvsc: ENST00000532948.1:n.457+2352C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000534292
  gene symbol: IL15RA
  hgvsc: ENST00000534292.1:n.513C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369312
  ensembl transcript: ENST00000379977
  gene symbol: IL15RA
  hgvsc: ENST00000379977.3:c.332C>T
  hgvsp: ENSP00000369312.3:p.Thr111Met
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379972
  gene symbol: IL15RA
  hgvsc: ENST00000379972.2:n.606+2352C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380423
  ensembl transcript: ENST00000397251
  gene symbol: IL15RA
  hgvsc: ENST00000397251.3:c.137C>T
  hgvsp: ENSP00000380423.2:p.Thr46Met
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000431529
  ensembl transcript: ENST00000525219
  gene symbol: IL15RA
  hgvsc: ENST00000525219.2:c.224C>T
  hgvsp: ENSP00000431529.2:p.Thr75Met
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000395113
  ensembl transcript: ENST00000429135
  gene symbol: IL15RA
  hgvsc: ENST00000429135.2:c.283+2352C>T
  variant of: http://identifiers.org/hgnc/5978
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 908
  bin: 3.75e1
  variant carriers: 69
genotype quality: GenotypeQuality
hgvs: p.Thr111Met
num of homozygotes: 4
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: East Asian
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: DP

10-6005773-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6005773
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 6005773
    reference: chr 10
allele count: 3
allele frequency: 2.7183762232693e-5
allele num: 110360
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000405128
  ensembl transcript: ENST00000447291
  gene symbol: IL15RA
  hgvsc: ENST00000447291.1:c.23G>A
  hgvsp: ENST00000447291.1:c.23G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000395113
  ensembl transcript: ENST00000429135
  gene symbol: IL15RA
  hgvsc: ENST00000429135.2:c.283+2335G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000532948
  gene symbol: IL15RA
  hgvsc: ENST00000532948.1:n.457+2335G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369306
  ensembl transcript: ENST00000379971
  gene symbol: IL15RA
  hgvsc: ENST00000379971.1:c.89-3243G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369312
  ensembl transcript: ENST00000379977
  gene symbol: IL15RA
  hgvsc: ENST00000379977.3:c.315G>A
  hgvsp: ENST00000379977.3:c.315G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000405107
  ensembl transcript: ENST00000453922
  gene symbol: IL15RA
  hgvsc: ENST00000453922.1:c.204G>A
  hgvsp: ENST00000453922.1:c.204G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379972
  gene symbol: IL15RA
  hgvsc: ENST00000379972.2:n.606+2335G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380421
  ensembl transcript: ENST00000397248
  gene symbol: IL15RA
  hgvsc: ENST00000397248.2:c.207G>A
  hgvsp: ENST00000397248.2:c.207G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000534292
  gene symbol: IL15RA
  hgvsc: ENST00000534292.1:n.496G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379974
  gene symbol: IL15RA
  hgvsc: ENST00000379974.1:n.404-3243G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380420
  ensembl transcript: ENST00000397246
  gene symbol: IL15RA
  hgvsc: ENST00000397246.3:c.175+2335G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380423
  ensembl transcript: ENST00000397251
  gene symbol: IL15RA
  hgvsc: ENST00000397251.3:c.120G>A
  hgvsp: ENST00000397251.3:c.120G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380422
  ensembl transcript: ENST00000397250
  gene symbol: IL15RA
  hgvsc: ENST00000397250.2:c.89-3243G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380426
  ensembl transcript: ENST00000397255
  gene symbol: IL15RA
  hgvsc: ENST00000397255.3:c.315G>A
  hgvsp: ENST00000397255.3:c.315G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000431529
  ensembl transcript: ENST00000525219
  gene symbol: IL15RA
  hgvsc: ENST00000525219.2:c.207G>A
  hgvsp: ENST00000525219.2:c.207G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000432691
  ensembl transcript: ENST00000532039
  gene symbol: IL15RA
  hgvsc: ENST00000532039.1:c.195+2335G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435995
  ensembl transcript: ENST00000530685
  gene symbol: IL15RA
  hgvsc: ENST00000530685.1:c.283+2335G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435454
  ensembl transcript: ENST00000528354
  gene symbol: IL15RA
  hgvsc: ENST00000528354.1:c.283+2335G>A
  variant of: http://identifiers.org/hgnc/5978
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4981
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12811
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala105Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: Latino
population: East Asian
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD

10-6005774-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6005774
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 6005774
    reference: chr 10
allele count: 1
allele frequency: 9.142606374225164e-6
allele num: 109378
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380422
  ensembl transcript: ENST00000397250
  gene symbol: IL15RA
  hgvsc: ENST00000397250.2:c.89-3244C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000532948
  gene symbol: IL15RA
  hgvsc: ENST00000532948.1:n.457+2334C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380423
  ensembl transcript: ENST00000397251
  gene symbol: IL15RA
  hgvsc: ENST00000397251.3:c.119C>T
  hgvsp: ENSP00000380423.2:p.Ala40Val
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380421
  ensembl transcript: ENST00000397248
  gene symbol: IL15RA
  hgvsc: ENST00000397248.2:c.206C>T
  hgvsp: ENSP00000380421.2:p.Ala69Val
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000395113
  ensembl transcript: ENST00000429135
  gene symbol: IL15RA
  hgvsc: ENST00000429135.2:c.283+2334C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435995
  ensembl transcript: ENST00000530685
  gene symbol: IL15RA
  hgvsc: ENST00000530685.1:c.283+2334C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369312
  ensembl transcript: ENST00000379977
  gene symbol: IL15RA
  hgvsc: ENST00000379977.3:c.314C>T
  hgvsp: ENSP00000369312.3:p.Ala105Val
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435454
  ensembl transcript: ENST00000528354
  gene symbol: IL15RA
  hgvsc: ENST00000528354.1:c.283+2334C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369306
  ensembl transcript: ENST00000379971
  gene symbol: IL15RA
  hgvsc: ENST00000379971.1:c.89-3244C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000432691
  ensembl transcript: ENST00000532039
  gene symbol: IL15RA
  hgvsc: ENST00000532039.1:c.195+2334C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000431529
  ensembl transcript: ENST00000525219
  gene symbol: IL15RA
  hgvsc: ENST00000525219.2:c.206C>T
  hgvsp: ENSP00000431529.2:p.Ala69Val
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380426
  ensembl transcript: ENST00000397255
  gene symbol: IL15RA
  hgvsc: ENST00000397255.3:c.314C>T
  hgvsp: ENSP00000380426.3:p.Ala105Val
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000534292
  gene symbol: IL15RA
  hgvsc: ENST00000534292.1:n.495C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000405128
  ensembl transcript: ENST00000447291
  gene symbol: IL15RA
  hgvsc: ENST00000447291.1:c.22C>T
  hgvsp: ENSP00000405128.1:p.Ala8Val
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379974
  gene symbol: IL15RA
  hgvsc: ENST00000379974.1:n.404-3244C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380420
  ensembl transcript: ENST00000397246
  gene symbol: IL15RA
  hgvsc: ENST00000397246.3:c.175+2334C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000405107
  ensembl transcript: ENST00000453922
  gene symbol: IL15RA
  hgvsc: ENST00000453922.1:c.203C>T
  hgvsp: ENSP00000405107.1:p.Ala68Val
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379972
  gene symbol: IL15RA
  hgvsc: ENST00000379972.2:n.606+2334C>T
  variant of: http://identifiers.org/hgnc/5978
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala105Val
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum

10-6005799-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6005799
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 6005799
    reference: chr 10
allele count: 43
allele frequency: 4.514625286101254e-4
allele num: 95246
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000532948
  gene symbol: IL15RA
  hgvsc: ENST00000532948.1:n.457+2309C>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000431529
  ensembl transcript: ENST00000525219
  gene symbol: IL15RA
  hgvsc: ENST00000525219.2:c.181C>G
  hgvsp: ENSP00000431529.2:p.Pro61Ala
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369306
  ensembl transcript: ENST00000379971
  gene symbol: IL15RA
  hgvsc: ENST00000379971.1:c.89-3269C>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369312
  ensembl transcript: ENST00000379977
  gene symbol: IL15RA
  hgvsc: ENST00000379977.3:c.289C>G
  hgvsp: ENSP00000369312.3:p.Pro97Ala
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380421
  ensembl transcript: ENST00000397248
  gene symbol: IL15RA
  hgvsc: ENST00000397248.2:c.181C>G
  hgvsp: ENSP00000380421.2:p.Pro61Ala
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380426
  ensembl transcript: ENST00000397255
  gene symbol: IL15RA
  hgvsc: ENST00000397255.3:c.289C>G
  hgvsp: ENSP00000380426.3:p.Pro97Ala
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000432691
  ensembl transcript: ENST00000532039
  gene symbol: IL15RA
  hgvsc: ENST00000532039.1:c.195+2309C>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380423
  ensembl transcript: ENST00000397251
  gene symbol: IL15RA
  hgvsc: ENST00000397251.3:c.94C>G
  hgvsp: ENSP00000380423.2:p.Pro32Ala
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379972
  gene symbol: IL15RA
  hgvsc: ENST00000379972.2:n.606+2309C>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380420
  ensembl transcript: ENST00000397246
  gene symbol: IL15RA
  hgvsc: ENST00000397246.3:c.175+2309C>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435454
  ensembl transcript: ENST00000528354
  gene symbol: IL15RA
  hgvsc: ENST00000528354.1:c.283+2309C>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000534292
  gene symbol: IL15RA
  hgvsc: ENST00000534292.1:n.470C>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000405107
  ensembl transcript: ENST00000453922
  gene symbol: IL15RA
  hgvsc: ENST00000453922.1:c.178C>G
  hgvsp: ENSP00000405107.1:p.Pro60Ala
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000395113
  ensembl transcript: ENST00000429135
  gene symbol: IL15RA
  hgvsc: ENST00000429135.2:c.283+2309C>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379974
  gene symbol: IL15RA
  hgvsc: ENST00000379974.1:n.404-3269C>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380422
  ensembl transcript: ENST00000397250
  gene symbol: IL15RA
  hgvsc: ENST00000397250.2:c.89-3269C>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435995
  ensembl transcript: ENST00000530685
  gene symbol: IL15RA
  hgvsc: ENST00000530685.1:c.283+2309C>G
  variant of: http://identifiers.org/hgnc/5978
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 614
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Pro97Ala
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

10-6005806-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6005806
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 6005806
    reference: chr 10
allele count: 1
allele frequency: 1.105509861147962e-5
allele num: 90456
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000532948
  gene symbol: IL15RA
  hgvsc: ENST00000532948.1:n.457+2302A>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000432691
  ensembl transcript: ENST00000532039
  gene symbol: IL15RA
  hgvsc: ENST00000532039.1:c.195+2302A>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380422
  ensembl transcript: ENST00000397250
  gene symbol: IL15RA
  hgvsc: ENST00000397250.2:c.89-3276A>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369306
  ensembl transcript: ENST00000379971
  gene symbol: IL15RA
  hgvsc: ENST00000379971.1:c.89-3276A>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000534292
  gene symbol: IL15RA
  hgvsc: ENST00000534292.1:n.465-2A>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: true
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369312
  ensembl transcript: ENST00000379977
  gene symbol: IL15RA
  hgvsc: ENST00000379977.3:c.284-2A>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380423
  ensembl transcript: ENST00000397251
  gene symbol: IL15RA
  hgvsc: ENST00000397251.3:c.89-2A>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380426
  ensembl transcript: ENST00000397255
  gene symbol: IL15RA
  hgvsc: ENST00000397255.3:c.284-2A>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000395113
  ensembl transcript: ENST00000429135
  gene symbol: IL15RA
  hgvsc: ENST00000429135.2:c.283+2302A>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379972
  gene symbol: IL15RA
  hgvsc: ENST00000379972.2:n.606+2302A>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380421
  ensembl transcript: ENST00000397248
  gene symbol: IL15RA
  hgvsc: ENST00000397248.2:c.176-2A>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380420
  ensembl transcript: ENST00000397246
  gene symbol: IL15RA
  hgvsc: ENST00000397246.3:c.175+2302A>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379974
  gene symbol: IL15RA
  hgvsc: ENST00000379974.1:n.404-3276A>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000431529
  ensembl transcript: ENST00000525219
  gene symbol: IL15RA
  hgvsc: ENST00000525219.2:c.176-2A>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435995
  ensembl transcript: ENST00000530685
  gene symbol: IL15RA
  hgvsc: ENST00000530685.1:c.283+2302A>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435454
  ensembl transcript: ENST00000528354
  gene symbol: IL15RA
  hgvsc: ENST00000528354.1:c.283+2302A>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000405107
  ensembl transcript: ENST00000453922
  gene symbol: IL15RA
  hgvsc: ENST00000453922.1:c.176-5A>T
  variant of: http://identifiers.org/hgnc/5978
canonical: true
consequence: splice acceptor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13743
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1999
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14393
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2451
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: c.284-2A>T
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum

10-6005814-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6005814
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 6005814
    reference: chr 10
allele count: 1
allele frequency: 1.16677945534735e-5
allele num: 85706
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000431529
  ensembl transcript: ENST00000525219
  gene symbol: IL15RA
  hgvsc: ENST00000525219.2:c.176-10C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379974
  gene symbol: IL15RA
  hgvsc: ENST00000379974.1:n.404-3284C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435995
  ensembl transcript: ENST00000530685
  gene symbol: IL15RA
  hgvsc: ENST00000530685.1:c.283+2294C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380420
  ensembl transcript: ENST00000397246
  gene symbol: IL15RA
  hgvsc: ENST00000397246.3:c.175+2294C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000432691
  ensembl transcript: ENST00000532039
  gene symbol: IL15RA
  hgvsc: ENST00000532039.1:c.195+2294C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380422
  ensembl transcript: ENST00000397250
  gene symbol: IL15RA
  hgvsc: ENST00000397250.2:c.89-3284C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000532948
  gene symbol: IL15RA
  hgvsc: ENST00000532948.1:n.457+2294C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380423
  ensembl transcript: ENST00000397251
  gene symbol: IL15RA
  hgvsc: ENST00000397251.3:c.89-10C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435454
  ensembl transcript: ENST00000528354
  gene symbol: IL15RA
  hgvsc: ENST00000528354.1:c.283+2294C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369306
  ensembl transcript: ENST00000379971
  gene symbol: IL15RA
  hgvsc: ENST00000379971.1:c.89-3284C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380426
  ensembl transcript: ENST00000397255
  gene symbol: IL15RA
  hgvsc: ENST00000397255.3:c.284-10C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380421
  ensembl transcript: ENST00000397248
  gene symbol: IL15RA
  hgvsc: ENST00000397248.2:c.176-10C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000405107
  ensembl transcript: ENST00000453922
  gene symbol: IL15RA
  hgvsc: ENST00000453922.1:c.176-13C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369312
  ensembl transcript: ENST00000379977
  gene symbol: IL15RA
  hgvsc: ENST00000379977.3:c.284-10C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000395113
  ensembl transcript: ENST00000429135
  gene symbol: IL15RA
  hgvsc: ENST00000429135.2:c.283+2294C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379972
  gene symbol: IL15RA
  hgvsc: ENST00000379972.2:n.606+2294C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000534292
  gene symbol: IL15RA
  hgvsc: ENST00000534292.1:n.465-10C>T
  variant of: http://identifiers.org/hgnc/5978
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10268
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1410
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1840
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2751
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum

10-6005816-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6005816
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 6005816
    reference: chr 10
allele count: 2
allele frequency: 2.359213909925213e-5
allele num: 84774
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380426
  ensembl transcript: ENST00000397255
  gene symbol: IL15RA
  hgvsc: ENST00000397255.3:c.284-12T>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379972
  gene symbol: IL15RA
  hgvsc: ENST00000379972.2:n.606+2292T>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000431529
  ensembl transcript: ENST00000525219
  gene symbol: IL15RA
  hgvsc: ENST00000525219.2:c.176-12T>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380421
  ensembl transcript: ENST00000397248
  gene symbol: IL15RA
  hgvsc: ENST00000397248.2:c.176-12T>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000432691
  ensembl transcript: ENST00000532039
  gene symbol: IL15RA
  hgvsc: ENST00000532039.1:c.195+2292T>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380422
  ensembl transcript: ENST00000397250
  gene symbol: IL15RA
  hgvsc: ENST00000397250.2:c.89-3286T>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000532948
  gene symbol: IL15RA
  hgvsc: ENST00000532948.1:n.457+2292T>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000395113
  ensembl transcript: ENST00000429135
  gene symbol: IL15RA
  hgvsc: ENST00000429135.2:c.283+2292T>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380423
  ensembl transcript: ENST00000397251
  gene symbol: IL15RA
  hgvsc: ENST00000397251.3:c.89-12T>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369306
  ensembl transcript: ENST00000379971
  gene symbol: IL15RA
  hgvsc: ENST00000379971.1:c.89-3286T>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435995
  ensembl transcript: ENST00000530685
  gene symbol: IL15RA
  hgvsc: ENST00000530685.1:c.283+2292T>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000405107
  ensembl transcript: ENST00000453922
  gene symbol: IL15RA
  hgvsc: ENST00000453922.1:c.176-15T>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000534292
  gene symbol: IL15RA
  hgvsc: ENST00000534292.1:n.465-12T>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435454
  ensembl transcript: ENST00000528354
  gene symbol: IL15RA
  hgvsc: ENST00000528354.1:c.283+2292T>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379974
  gene symbol: IL15RA
  hgvsc: ENST00000379974.1:n.404-3286T>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369312
  ensembl transcript: ENST00000379977
  gene symbol: IL15RA
  hgvsc: ENST00000379977.3:c.284-12T>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380420
  ensembl transcript: ENST00000397246
  gene symbol: IL15RA
  hgvsc: ENST00000397246.3:c.175+2292T>A
  variant of: http://identifiers.org/hgnc/5978
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 610
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1615
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16378
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5104
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
reference allele: A
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD

10-6005824-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6005824
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 6005824
    reference: chr 10
allele count: 1
allele frequency: 1.264638187014695e-5
allele num: 79074
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000431529
  ensembl transcript: ENST00000525219
  gene symbol: IL15RA
  hgvsc: ENST00000525219.2:c.176-20T>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379972
  gene symbol: IL15RA
  hgvsc: ENST00000379972.2:n.606+2284T>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000532948
  gene symbol: IL15RA
  hgvsc: ENST00000532948.1:n.457+2284T>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000405107
  ensembl transcript: ENST00000453922
  gene symbol: IL15RA
  hgvsc: ENST00000453922.1:c.176-23T>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000395113
  ensembl transcript: ENST00000429135
  gene symbol: IL15RA
  hgvsc: ENST00000429135.2:c.283+2284T>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380423
  ensembl transcript: ENST00000397251
  gene symbol: IL15RA
  hgvsc: ENST00000397251.3:c.89-20T>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435995
  ensembl transcript: ENST00000530685
  gene symbol: IL15RA
  hgvsc: ENST00000530685.1:c.283+2284T>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435454
  ensembl transcript: ENST00000528354
  gene symbol: IL15RA
  hgvsc: ENST00000528354.1:c.283+2284T>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380420
  ensembl transcript: ENST00000397246
  gene symbol: IL15RA
  hgvsc: ENST00000397246.3:c.175+2284T>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380421
  ensembl transcript: ENST00000397248
  gene symbol: IL15RA
  hgvsc: ENST00000397248.2:c.176-20T>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369306
  ensembl transcript: ENST00000379971
  gene symbol: IL15RA
  hgvsc: ENST00000379971.1:c.89-3294T>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369312
  ensembl transcript: ENST00000379977
  gene symbol: IL15RA
  hgvsc: ENST00000379977.3:c.284-20T>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380426
  ensembl transcript: ENST00000397255
  gene symbol: IL15RA
  hgvsc: ENST00000397255.3:c.284-20T>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379974
  gene symbol: IL15RA
  hgvsc: ENST00000379974.1:n.404-3294T>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380422
  ensembl transcript: ENST00000397250
  gene symbol: IL15RA
  hgvsc: ENST00000397250.2:c.89-3294T>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000432691
  ensembl transcript: ENST00000532039
  gene symbol: IL15RA
  hgvsc: ENST00000532039.1:c.195+2284T>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000534292
  gene symbol: IL15RA
  hgvsc: ENST00000534292.1:n.465-20T>C
  variant of: http://identifiers.org/hgnc/5978
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6245
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17529
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3486
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1642
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: A
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum

10-6005834-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6005834
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 6005834
    reference: chr 10
allele count: 2
allele frequency: 2.7000027000027e-5
allele num: 74074
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000534292
  gene symbol: IL15RA
  hgvsc: ENST00000534292.1:n.465-30A>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000405107
  ensembl transcript: ENST00000453922
  gene symbol: IL15RA
  hgvsc: ENST00000453922.1:c.176-33A>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379972
  gene symbol: IL15RA
  hgvsc: ENST00000379972.2:n.606+2274A>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000432691
  ensembl transcript: ENST00000532039
  gene symbol: IL15RA
  hgvsc: ENST00000532039.1:c.195+2274A>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000395113
  ensembl transcript: ENST00000429135
  gene symbol: IL15RA
  hgvsc: ENST00000429135.2:c.283+2274A>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380423
  ensembl transcript: ENST00000397251
  gene symbol: IL15RA
  hgvsc: ENST00000397251.3:c.89-30A>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000532948
  gene symbol: IL15RA
  hgvsc: ENST00000532948.1:n.457+2274A>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380420
  ensembl transcript: ENST00000397246
  gene symbol: IL15RA
  hgvsc: ENST00000397246.3:c.175+2274A>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380421
  ensembl transcript: ENST00000397248
  gene symbol: IL15RA
  hgvsc: ENST00000397248.2:c.176-30A>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435454
  ensembl transcript: ENST00000528354
  gene symbol: IL15RA
  hgvsc: ENST00000528354.1:c.283+2274A>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380426
  ensembl transcript: ENST00000397255
  gene symbol: IL15RA
  hgvsc: ENST00000397255.3:c.284-30A>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369306
  ensembl transcript: ENST00000379971
  gene symbol: IL15RA
  hgvsc: ENST00000379971.1:c.89-3304A>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379974
  gene symbol: IL15RA
  hgvsc: ENST00000379974.1:n.404-3304A>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435995
  ensembl transcript: ENST00000530685
  gene symbol: IL15RA
  hgvsc: ENST00000530685.1:c.283+2274A>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380422
  ensembl transcript: ENST00000397250
  gene symbol: IL15RA
  hgvsc: ENST00000397250.2:c.89-3304A>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369312
  ensembl transcript: ENST00000379977
  gene symbol: IL15RA
  hgvsc: ENST00000379977.3:c.284-30A>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000431529
  ensembl transcript: ENST00000525219
  gene symbol: IL15RA
  hgvsc: ENST00000525219.2:c.176-30A>G
  variant of: http://identifiers.org/hgnc/5978
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18822
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3879
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 769
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2616
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1534
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
population: East Asian
reference allele: T
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum

10-6005837-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6005837
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 6005837
    reference: chr 10
allele count: 0
allele frequency: 0.0e0
allele num: 72184
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380423
  ensembl transcript: ENST00000397251
  gene symbol: IL15RA
  hgvsc: ENST00000397251.3:c.89-33A>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000431529
  ensembl transcript: ENST00000525219
  gene symbol: IL15RA
  hgvsc: ENST00000525219.2:c.176-33A>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380421
  ensembl transcript: ENST00000397248
  gene symbol: IL15RA
  hgvsc: ENST00000397248.2:c.176-33A>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380426
  ensembl transcript: ENST00000397255
  gene symbol: IL15RA
  hgvsc: ENST00000397255.3:c.284-33A>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000405107
  ensembl transcript: ENST00000453922
  gene symbol: IL15RA
  hgvsc: ENST00000453922.1:c.176-36A>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000432691
  ensembl transcript: ENST00000532039
  gene symbol: IL15RA
  hgvsc: ENST00000532039.1:c.195+2271A>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380420
  ensembl transcript: ENST00000397246
  gene symbol: IL15RA
  hgvsc: ENST00000397246.3:c.175+2271A>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435454
  ensembl transcript: ENST00000528354
  gene symbol: IL15RA
  hgvsc: ENST00000528354.1:c.283+2271A>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000532948
  gene symbol: IL15RA
  hgvsc: ENST00000532948.1:n.457+2271A>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369306
  ensembl transcript: ENST00000379971
  gene symbol: IL15RA
  hgvsc: ENST00000379971.1:c.89-3307A>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000395113
  ensembl transcript: ENST00000429135
  gene symbol: IL15RA
  hgvsc: ENST00000429135.2:c.283+2271A>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435995
  ensembl transcript: ENST00000530685
  gene symbol: IL15RA
  hgvsc: ENST00000530685.1:c.283+2271A>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369312
  ensembl transcript: ENST00000379977
  gene symbol: IL15RA
  hgvsc: ENST00000379977.3:c.284-33A>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000534292
  gene symbol: IL15RA
  hgvsc: ENST00000534292.1:n.465-33A>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379972
  gene symbol: IL15RA
  hgvsc: ENST00000379972.2:n.606+2271A>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380422
  ensembl transcript: ENST00000397250
  gene symbol: IL15RA
  hgvsc: ENST00000397250.2:c.89-3307A>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379974
  gene symbol: IL15RA
  hgvsc: ENST00000379974.1:n.404-3307A>T
  variant of: http://identifiers.org/hgnc/5978
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 1511
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2409
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 766
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4141
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: Other
reference allele: T
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum

10-6008058-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6008058
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 6008058
    reference: chr 10
allele count: 1
allele frequency: 9.784927297990176e-6
allele num: 102198
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000532948
  gene symbol: IL15RA
  hgvsc: ENST00000532948.1:n.457+50G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380426
  ensembl transcript: ENST00000397255
  gene symbol: IL15RA
  hgvsc: ENST00000397255.3:c.283+50G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379974
  gene symbol: IL15RA
  hgvsc: ENST00000379974.1:n.404-5528G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379972
  gene symbol: IL15RA
  hgvsc: ENST00000379972.2:n.606+50G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380421
  ensembl transcript: ENST00000397248
  gene symbol: IL15RA
  hgvsc: ENST00000397248.2:c.175+50G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380423
  ensembl transcript: ENST00000397251
  gene symbol: IL15RA
  hgvsc: ENST00000397251.3:c.89-2254G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435454
  ensembl transcript: ENST00000528354
  gene symbol: IL15RA
  hgvsc: ENST00000528354.1:c.283+50G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369306
  ensembl transcript: ENST00000379971
  gene symbol: IL15RA
  hgvsc: ENST00000379971.1:c.89-5528G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000395113
  ensembl transcript: ENST00000429135
  gene symbol: IL15RA
  hgvsc: ENST00000429135.2:c.283+50G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000432691
  ensembl transcript: ENST00000532039
  gene symbol: IL15RA
  hgvsc: ENST00000532039.1:c.195+50G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380420
  ensembl transcript: ENST00000397246
  gene symbol: IL15RA
  hgvsc: ENST00000397246.3:c.175+50G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000405107
  ensembl transcript: ENST00000453922
  gene symbol: IL15RA
  hgvsc: ENST00000453922.1:c.175+50G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435995
  ensembl transcript: ENST00000530685
  gene symbol: IL15RA
  hgvsc: ENST00000530685.1:c.283+50G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380422
  ensembl transcript: ENST00000397250
  gene symbol: IL15RA
  hgvsc: ENST00000397250.2:c.89-5528G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000534292
  gene symbol: IL15RA
  hgvsc: ENST00000534292.1:n.464+50G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000431529
  ensembl transcript: ENST00000525219
  gene symbol: IL15RA
  hgvsc: ENST00000525219.2:c.175+50G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369312
  ensembl transcript: ENST00000379977
  gene symbol: IL15RA
  hgvsc: ENST00000379977.3:c.283+50G>A
  variant of: http://identifiers.org/hgnc/5978
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1854
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7401
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5361
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17225
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: Other
population: East Asian
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum

10-6008067-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6008067
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 6008067
    reference: chr 10
allele count: 1
allele frequency: 9.599877121572845e-6
allele num: 104168
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000432691
  ensembl transcript: ENST00000532039
  gene symbol: IL15RA
  hgvsc: ENST00000532039.1:c.195+41C>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369306
  ensembl transcript: ENST00000379971
  gene symbol: IL15RA
  hgvsc: ENST00000379971.1:c.89-5537C>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435454
  ensembl transcript: ENST00000528354
  gene symbol: IL15RA
  hgvsc: ENST00000528354.1:c.283+41C>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379972
  gene symbol: IL15RA
  hgvsc: ENST00000379972.2:n.606+41C>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380420
  ensembl transcript: ENST00000397246
  gene symbol: IL15RA
  hgvsc: ENST00000397246.3:c.175+41C>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000532948
  gene symbol: IL15RA
  hgvsc: ENST00000532948.1:n.457+41C>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380422
  ensembl transcript: ENST00000397250
  gene symbol: IL15RA
  hgvsc: ENST00000397250.2:c.89-5537C>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000405107
  ensembl transcript: ENST00000453922
  gene symbol: IL15RA
  hgvsc: ENST00000453922.1:c.175+41C>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379974
  gene symbol: IL15RA
  hgvsc: ENST00000379974.1:n.404-5537C>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435995
  ensembl transcript: ENST00000530685
  gene symbol: IL15RA
  hgvsc: ENST00000530685.1:c.283+41C>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000534292
  gene symbol: IL15RA
  hgvsc: ENST00000534292.1:n.464+41C>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380423
  ensembl transcript: ENST00000397251
  gene symbol: IL15RA
  hgvsc: ENST00000397251.3:c.89-2263C>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000431529
  ensembl transcript: ENST00000525219
  gene symbol: IL15RA
  hgvsc: ENST00000525219.2:c.175+41C>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000395113
  ensembl transcript: ENST00000429135
  gene symbol: IL15RA
  hgvsc: ENST00000429135.2:c.283+41C>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380426
  ensembl transcript: ENST00000397255
  gene symbol: IL15RA
  hgvsc: ENST00000397255.3:c.283+41C>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380421
  ensembl transcript: ENST00000397248
  gene symbol: IL15RA
  hgvsc: ENST00000397248.2:c.175+41C>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369312
  ensembl transcript: ENST00000379977
  gene symbol: IL15RA
  hgvsc: ENST00000379977.3:c.283+41C>G
  variant of: http://identifiers.org/hgnc/5978
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6378
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11666
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7183
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: Other
population: East Asian
reference allele: G
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum

10-6008068-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6008068
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 6008068
    reference: chr 10
allele count: 1
allele frequency: 9.565716472163766e-6
allele num: 104540
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000534292
  gene symbol: IL15RA
  hgvsc: ENST00000534292.1:n.464+40C>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379974
  gene symbol: IL15RA
  hgvsc: ENST00000379974.1:n.404-5538C>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369306
  ensembl transcript: ENST00000379971
  gene symbol: IL15RA
  hgvsc: ENST00000379971.1:c.89-5538C>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000405107
  ensembl transcript: ENST00000453922
  gene symbol: IL15RA
  hgvsc: ENST00000453922.1:c.175+40C>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435454
  ensembl transcript: ENST00000528354
  gene symbol: IL15RA
  hgvsc: ENST00000528354.1:c.283+40C>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379972
  gene symbol: IL15RA
  hgvsc: ENST00000379972.2:n.606+40C>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435995
  ensembl transcript: ENST00000530685
  gene symbol: IL15RA
  hgvsc: ENST00000530685.1:c.283+40C>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380426
  ensembl transcript: ENST00000397255
  gene symbol: IL15RA
  hgvsc: ENST00000397255.3:c.283+40C>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000532948
  gene symbol: IL15RA
  hgvsc: ENST00000532948.1:n.457+40C>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380422
  ensembl transcript: ENST00000397250
  gene symbol: IL15RA
  hgvsc: ENST00000397250.2:c.89-5538C>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000395113
  ensembl transcript: ENST00000429135
  gene symbol: IL15RA
  hgvsc: ENST00000429135.2:c.283+40C>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380420
  ensembl transcript: ENST00000397246
  gene symbol: IL15RA
  hgvsc: ENST00000397246.3:c.175+40C>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000432691
  ensembl transcript: ENST00000532039
  gene symbol: IL15RA
  hgvsc: ENST00000532039.1:c.195+40C>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000431529
  ensembl transcript: ENST00000525219
  gene symbol: IL15RA
  hgvsc: ENST00000525219.2:c.175+40C>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369312
  ensembl transcript: ENST00000379977
  gene symbol: IL15RA
  hgvsc: ENST00000379977.3:c.283+40C>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380423
  ensembl transcript: ENST00000397251
  gene symbol: IL15RA
  hgvsc: ENST00000397251.3:c.89-2264C>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380421
  ensembl transcript: ENST00000397248
  gene symbol: IL15RA
  hgvsc: ENST00000397248.2:c.175+40C>G
  variant of: http://identifiers.org/hgnc/5978
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10966
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6511
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7152
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: QD

10-6008070-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6008070
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 6008070
    reference: chr 10
allele count: 5
allele frequency: 4.760453956889329e-5
allele num: 105032
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000405107
  ensembl transcript: ENST00000453922
  gene symbol: IL15RA
  hgvsc: ENST00000453922.1:c.175+38C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369306
  ensembl transcript: ENST00000379971
  gene symbol: IL15RA
  hgvsc: ENST00000379971.1:c.89-5540C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369312
  ensembl transcript: ENST00000379977
  gene symbol: IL15RA
  hgvsc: ENST00000379977.3:c.283+38C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380421
  ensembl transcript: ENST00000397248
  gene symbol: IL15RA
  hgvsc: ENST00000397248.2:c.175+38C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000532948
  gene symbol: IL15RA
  hgvsc: ENST00000532948.1:n.457+38C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380426
  ensembl transcript: ENST00000397255
  gene symbol: IL15RA
  hgvsc: ENST00000397255.3:c.283+38C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000534292
  gene symbol: IL15RA
  hgvsc: ENST00000534292.1:n.464+38C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435995
  ensembl transcript: ENST00000530685
  gene symbol: IL15RA
  hgvsc: ENST00000530685.1:c.283+38C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000395113
  ensembl transcript: ENST00000429135
  gene symbol: IL15RA
  hgvsc: ENST00000429135.2:c.283+38C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379974
  gene symbol: IL15RA
  hgvsc: ENST00000379974.1:n.404-5540C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379972
  gene symbol: IL15RA
  hgvsc: ENST00000379972.2:n.606+38C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380420
  ensembl transcript: ENST00000397246
  gene symbol: IL15RA
  hgvsc: ENST00000397246.3:c.175+38C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435454
  ensembl transcript: ENST00000528354
  gene symbol: IL15RA
  hgvsc: ENST00000528354.1:c.283+38C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380423
  ensembl transcript: ENST00000397251
  gene symbol: IL15RA
  hgvsc: ENST00000397251.3:c.89-2266C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000431529
  ensembl transcript: ENST00000525219
  gene symbol: IL15RA
  hgvsc: ENST00000525219.2:c.175+38C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380422
  ensembl transcript: ENST00000397250
  gene symbol: IL15RA
  hgvsc: ENST00000397250.2:c.89-5540C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000432691
  ensembl transcript: ENST00000532039
  gene symbol: IL15RA
  hgvsc: ENST00000532039.1:c.195+38C>T
  variant of: http://identifiers.org/hgnc/5978
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16249
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2456
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9934
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6769
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 789
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum

10-6008070-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6008070
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 6008070
    reference: chr 10
allele count: 3
allele frequency: 2.856272374133597e-5
allele num: 105032
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000395113
  ensembl transcript: ENST00000429135
  gene symbol: IL15RA
  hgvsc: ENST00000429135.2:c.283+38C>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000405107
  ensembl transcript: ENST00000453922
  gene symbol: IL15RA
  hgvsc: ENST00000453922.1:c.175+38C>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380426
  ensembl transcript: ENST00000397255
  gene symbol: IL15RA
  hgvsc: ENST00000397255.3:c.283+38C>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000534292
  gene symbol: IL15RA
  hgvsc: ENST00000534292.1:n.464+38C>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000532948
  gene symbol: IL15RA
  hgvsc: ENST00000532948.1:n.457+38C>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369312
  ensembl transcript: ENST00000379977
  gene symbol: IL15RA
  hgvsc: ENST00000379977.3:c.283+38C>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000431529
  ensembl transcript: ENST00000525219
  gene symbol: IL15RA
  hgvsc: ENST00000525219.2:c.175+38C>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380420
  ensembl transcript: ENST00000397246
  gene symbol: IL15RA
  hgvsc: ENST00000397246.3:c.175+38C>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369306
  ensembl transcript: ENST00000379971
  gene symbol: IL15RA
  hgvsc: ENST00000379971.1:c.89-5540C>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379972
  gene symbol: IL15RA
  hgvsc: ENST00000379972.2:n.606+38C>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380423
  ensembl transcript: ENST00000397251
  gene symbol: IL15RA
  hgvsc: ENST00000397251.3:c.89-2266C>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380422
  ensembl transcript: ENST00000397250
  gene symbol: IL15RA
  hgvsc: ENST00000397250.2:c.89-5540C>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435995
  ensembl transcript: ENST00000530685
  gene symbol: IL15RA
  hgvsc: ENST00000530685.1:c.283+38C>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435454
  ensembl transcript: ENST00000528354
  gene symbol: IL15RA
  hgvsc: ENST00000528354.1:c.283+38C>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379974
  gene symbol: IL15RA
  hgvsc: ENST00000379974.1:n.404-5540C>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000432691
  ensembl transcript: ENST00000532039
  gene symbol: IL15RA
  hgvsc: ENST00000532039.1:c.195+38C>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380421
  ensembl transcript: ENST00000397248
  gene symbol: IL15RA
  hgvsc: ENST00000397248.2:c.175+38C>G
  variant of: http://identifiers.org/hgnc/5978
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6769
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 789
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: Other
population: East Asian
population: European (Finnish)
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum

10-6008070-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6008070
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 6008070
    reference: chr 10
allele count: 3
allele frequency: 2.856272374133597e-5
allele num: 105032
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000395113
  ensembl transcript: ENST00000429135
  gene symbol: IL15RA
  hgvsc: ENST00000429135.2:c.283+38C>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000534292
  gene symbol: IL15RA
  hgvsc: ENST00000534292.1:n.464+38C>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380422
  ensembl transcript: ENST00000397250
  gene symbol: IL15RA
  hgvsc: ENST00000397250.2:c.89-5540C>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369306
  ensembl transcript: ENST00000379971
  gene symbol: IL15RA
  hgvsc: ENST00000379971.1:c.89-5540C>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000532948
  gene symbol: IL15RA
  hgvsc: ENST00000532948.1:n.457+38C>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379974
  gene symbol: IL15RA
  hgvsc: ENST00000379974.1:n.404-5540C>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380426
  ensembl transcript: ENST00000397255
  gene symbol: IL15RA
  hgvsc: ENST00000397255.3:c.283+38C>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435995
  ensembl transcript: ENST00000530685
  gene symbol: IL15RA
  hgvsc: ENST00000530685.1:c.283+38C>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000405107
  ensembl transcript: ENST00000453922
  gene symbol: IL15RA
  hgvsc: ENST00000453922.1:c.175+38C>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379972
  gene symbol: IL15RA
  hgvsc: ENST00000379972.2:n.606+38C>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380423
  ensembl transcript: ENST00000397251
  gene symbol: IL15RA
  hgvsc: ENST00000397251.3:c.89-2266C>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435454
  ensembl transcript: ENST00000528354
  gene symbol: IL15RA
  hgvsc: ENST00000528354.1:c.283+38C>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380421
  ensembl transcript: ENST00000397248
  gene symbol: IL15RA
  hgvsc: ENST00000397248.2:c.175+38C>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380420
  ensembl transcript: ENST00000397246
  gene symbol: IL15RA
  hgvsc: ENST00000397246.3:c.175+38C>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369312
  ensembl transcript: ENST00000379977
  gene symbol: IL15RA
  hgvsc: ENST00000379977.3:c.283+38C>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000432691
  ensembl transcript: ENST00000532039
  gene symbol: IL15RA
  hgvsc: ENST00000532039.1:c.195+38C>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000431529
  ensembl transcript: ENST00000525219
  gene symbol: IL15RA
  hgvsc: ENST00000525219.2:c.175+38C>A
  variant of: http://identifiers.org/hgnc/5978
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6769
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 789
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7478
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16249
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9934
  bin: 1.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: ReadPosRankSum

10-6008084-GGT-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6008084
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 6008082
    reference: chr 10
allele count: 1
allele frequency: 9.137092942509411e-6
allele num: 109444
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000431529
  ensembl transcript: ENST00000525219
  gene symbol: IL15RA
  hgvsc: ENST00000525219.2:c.175+22_175+23delAC
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379974
  gene symbol: IL15RA
  hgvsc: ENST00000379974.1:n.404-5556_404-5555delAC
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435995
  ensembl transcript: ENST00000530685
  gene symbol: IL15RA
  hgvsc: ENST00000530685.1:c.283+22_283+23delAC
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000395113
  ensembl transcript: ENST00000429135
  gene symbol: IL15RA
  hgvsc: ENST00000429135.2:c.283+22_283+23delAC
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000432691
  ensembl transcript: ENST00000532039
  gene symbol: IL15RA
  hgvsc: ENST00000532039.1:c.195+22_195+23delAC
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380421
  ensembl transcript: ENST00000397248
  gene symbol: IL15RA
  hgvsc: ENST00000397248.2:c.175+22_175+23delAC
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435454
  ensembl transcript: ENST00000528354
  gene symbol: IL15RA
  hgvsc: ENST00000528354.1:c.283+22_283+23delAC
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369306
  ensembl transcript: ENST00000379971
  gene symbol: IL15RA
  hgvsc: ENST00000379971.1:c.89-5556_89-5555delAC
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000532948
  gene symbol: IL15RA
  hgvsc: ENST00000532948.1:n.457+22_457+23delAC
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380426
  ensembl transcript: ENST00000397255
  gene symbol: IL15RA
  hgvsc: ENST00000397255.3:c.283+22_283+23delAC
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000405107
  ensembl transcript: ENST00000453922
  gene symbol: IL15RA
  hgvsc: ENST00000453922.1:c.175+22_175+23delAC
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379972
  gene symbol: IL15RA
  hgvsc: ENST00000379972.2:n.606+22_606+23delAC
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000534292
  gene symbol: IL15RA
  hgvsc: ENST00000534292.1:n.464+22_464+23delAC
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380422
  ensembl transcript: ENST00000397250
  gene symbol: IL15RA
  hgvsc: ENST00000397250.2:c.89-5556_89-5555delAC
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369312
  ensembl transcript: ENST00000379977
  gene symbol: IL15RA
  hgvsc: ENST00000379977.3:c.283+22_283+23delAC
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380423
  ensembl transcript: ENST00000397251
  gene symbol: IL15RA
  hgvsc: ENST00000397251.3:c.89-2282_89-2281delAC
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380420
  ensembl transcript: ENST00000397246
  gene symbol: IL15RA
  hgvsc: ENST00000397246.3:c.175+22_175+23delAC
  variant of: http://identifiers.org/hgnc/5978
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3210
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27934
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: GGT
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum

10-6008087-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6008087
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 6008087
    reference: chr 10
allele count: 1
allele frequency: 9.065854366115463e-6
allele num: 110304
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379974
  gene symbol: IL15RA
  hgvsc: ENST00000379974.1:n.404-5557C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435995
  ensembl transcript: ENST00000530685
  gene symbol: IL15RA
  hgvsc: ENST00000530685.1:c.283+21C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000532948
  gene symbol: IL15RA
  hgvsc: ENST00000532948.1:n.457+21C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000395113
  ensembl transcript: ENST00000429135
  gene symbol: IL15RA
  hgvsc: ENST00000429135.2:c.283+21C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380423
  ensembl transcript: ENST00000397251
  gene symbol: IL15RA
  hgvsc: ENST00000397251.3:c.89-2283C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435454
  ensembl transcript: ENST00000528354
  gene symbol: IL15RA
  hgvsc: ENST00000528354.1:c.283+21C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380426
  ensembl transcript: ENST00000397255
  gene symbol: IL15RA
  hgvsc: ENST00000397255.3:c.283+21C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000405107
  ensembl transcript: ENST00000453922
  gene symbol: IL15RA
  hgvsc: ENST00000453922.1:c.175+21C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000431529
  ensembl transcript: ENST00000525219
  gene symbol: IL15RA
  hgvsc: ENST00000525219.2:c.175+21C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380422
  ensembl transcript: ENST00000397250
  gene symbol: IL15RA
  hgvsc: ENST00000397250.2:c.89-5557C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379972
  gene symbol: IL15RA
  hgvsc: ENST00000379972.2:n.606+21C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380420
  ensembl transcript: ENST00000397246
  gene symbol: IL15RA
  hgvsc: ENST00000397246.3:c.175+21C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380421
  ensembl transcript: ENST00000397248
  gene symbol: IL15RA
  hgvsc: ENST00000397248.2:c.175+21C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000534292
  gene symbol: IL15RA
  hgvsc: ENST00000534292.1:n.464+21C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000432691
  ensembl transcript: ENST00000532039
  gene symbol: IL15RA
  hgvsc: ENST00000532039.1:c.195+21C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369306
  ensembl transcript: ENST00000379971
  gene symbol: IL15RA
  hgvsc: ENST00000379971.1:c.89-5557C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369312
  ensembl transcript: ENST00000379977
  gene symbol: IL15RA
  hgvsc: ENST00000379977.3:c.283+21C>T
  variant of: http://identifiers.org/hgnc/5978
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7776
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 377
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5153
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff

10-6008090-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6008090
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 6008090
    reference: chr 10
allele count: 1
allele frequency: 8.981175456243714e-6
allele num: 111344
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379972
  gene symbol: IL15RA
  hgvsc: ENST00000379972.2:n.606+18C>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000395113
  ensembl transcript: ENST00000429135
  gene symbol: IL15RA
  hgvsc: ENST00000429135.2:c.283+18C>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000405107
  ensembl transcript: ENST00000453922
  gene symbol: IL15RA
  hgvsc: ENST00000453922.1:c.175+18C>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000432691
  ensembl transcript: ENST00000532039
  gene symbol: IL15RA
  hgvsc: ENST00000532039.1:c.195+18C>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369306
  ensembl transcript: ENST00000379971
  gene symbol: IL15RA
  hgvsc: ENST00000379971.1:c.89-5560C>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380420
  ensembl transcript: ENST00000397246
  gene symbol: IL15RA
  hgvsc: ENST00000397246.3:c.175+18C>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435995
  ensembl transcript: ENST00000530685
  gene symbol: IL15RA
  hgvsc: ENST00000530685.1:c.283+18C>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369312
  ensembl transcript: ENST00000379977
  gene symbol: IL15RA
  hgvsc: ENST00000379977.3:c.283+18C>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000532948
  gene symbol: IL15RA
  hgvsc: ENST00000532948.1:n.457+18C>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435454
  ensembl transcript: ENST00000528354
  gene symbol: IL15RA
  hgvsc: ENST00000528354.1:c.283+18C>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380426
  ensembl transcript: ENST00000397255
  gene symbol: IL15RA
  hgvsc: ENST00000397255.3:c.283+18C>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000431529
  ensembl transcript: ENST00000525219
  gene symbol: IL15RA
  hgvsc: ENST00000525219.2:c.175+18C>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000534292
  gene symbol: IL15RA
  hgvsc: ENST00000534292.1:n.464+18C>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380421
  ensembl transcript: ENST00000397248
  gene symbol: IL15RA
  hgvsc: ENST00000397248.2:c.175+18C>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379974
  gene symbol: IL15RA
  hgvsc: ENST00000379974.1:n.404-5560C>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380423
  ensembl transcript: ENST00000397251
  gene symbol: IL15RA
  hgvsc: ENST00000397251.3:c.89-2286C>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380422
  ensembl transcript: ENST00000397250
  gene symbol: IL15RA
  hgvsc: ENST00000397250.2:c.89-5560C>A
  variant of: http://identifiers.org/hgnc/5978
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4783
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30352
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2174
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3538
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
population: Latino
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: DP

10-6008096-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6008096
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 6008096
    reference: chr 10
allele count: 1
allele frequency: 8.78827292860407e-6
allele num: 113788
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000431529
  ensembl transcript: ENST00000525219
  gene symbol: IL15RA
  hgvsc: ENST00000525219.2:c.175+12T>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380423
  ensembl transcript: ENST00000397251
  gene symbol: IL15RA
  hgvsc: ENST00000397251.3:c.89-2292T>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000405107
  ensembl transcript: ENST00000453922
  gene symbol: IL15RA
  hgvsc: ENST00000453922.1:c.175+12T>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380426
  ensembl transcript: ENST00000397255
  gene symbol: IL15RA
  hgvsc: ENST00000397255.3:c.283+12T>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379972
  gene symbol: IL15RA
  hgvsc: ENST00000379972.2:n.606+12T>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435454
  ensembl transcript: ENST00000528354
  gene symbol: IL15RA
  hgvsc: ENST00000528354.1:c.283+12T>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000532948
  gene symbol: IL15RA
  hgvsc: ENST00000532948.1:n.457+12T>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380421
  ensembl transcript: ENST00000397248
  gene symbol: IL15RA
  hgvsc: ENST00000397248.2:c.175+12T>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000534292
  gene symbol: IL15RA
  hgvsc: ENST00000534292.1:n.464+12T>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369306
  ensembl transcript: ENST00000379971
  gene symbol: IL15RA
  hgvsc: ENST00000379971.1:c.89-5566T>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369312
  ensembl transcript: ENST00000379977
  gene symbol: IL15RA
  hgvsc: ENST00000379977.3:c.283+12T>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379974
  gene symbol: IL15RA
  hgvsc: ENST00000379974.1:n.404-5566T>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000432691
  ensembl transcript: ENST00000532039
  gene symbol: IL15RA
  hgvsc: ENST00000532039.1:c.195+12T>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000395113
  ensembl transcript: ENST00000429135
  gene symbol: IL15RA
  hgvsc: ENST00000429135.2:c.283+12T>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435995
  ensembl transcript: ENST00000530685
  gene symbol: IL15RA
  hgvsc: ENST00000530685.1:c.283+12T>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380422
  ensembl transcript: ENST00000397250
  gene symbol: IL15RA
  hgvsc: ENST00000397250.2:c.89-5566T>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380420
  ensembl transcript: ENST00000397246
  gene symbol: IL15RA
  hgvsc: ENST00000397246.3:c.175+12T>C
  variant of: http://identifiers.org/hgnc/5978
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4253
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3808
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3648
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1351
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
population: Latino
population: East Asian
population: European (Finnish)
reference allele: A
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: DP

10-6008106-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6008106
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 6008106
    reference: chr 10
allele count: 14
allele frequency: 1.196744853997128e-4
allele num: 116984
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000432691
  ensembl transcript: ENST00000532039
  gene symbol: IL15RA
  hgvsc: ENST00000532039.1:c.195+2T>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435454
  ensembl transcript: ENST00000528354
  gene symbol: IL15RA
  hgvsc: ENST00000528354.1:c.283+2T>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369312
  ensembl transcript: ENST00000379977
  gene symbol: IL15RA
  hgvsc: ENST00000379977.3:c.283+2T>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435995
  ensembl transcript: ENST00000530685
  gene symbol: IL15RA
  hgvsc: ENST00000530685.1:c.283+2T>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000532948
  gene symbol: IL15RA
  hgvsc: ENST00000532948.1:n.457+2T>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369306
  ensembl transcript: ENST00000379971
  gene symbol: IL15RA
  hgvsc: ENST00000379971.1:c.89-5576T>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380420
  ensembl transcript: ENST00000397246
  gene symbol: IL15RA
  hgvsc: ENST00000397246.3:c.175+2T>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000405107
  ensembl transcript: ENST00000453922
  gene symbol: IL15RA
  hgvsc: ENST00000453922.1:c.175+2T>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379972
  gene symbol: IL15RA
  hgvsc: ENST00000379972.2:n.606+2T>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380423
  ensembl transcript: ENST00000397251
  gene symbol: IL15RA
  hgvsc: ENST00000397251.3:c.89-2302T>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379974
  gene symbol: IL15RA
  hgvsc: ENST00000379974.1:n.404-5576T>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000534292
  gene symbol: IL15RA
  hgvsc: ENST00000534292.1:n.464+2T>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380421
  ensembl transcript: ENST00000397248
  gene symbol: IL15RA
  hgvsc: ENST00000397248.2:c.175+2T>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380422
  ensembl transcript: ENST00000397250
  gene symbol: IL15RA
  hgvsc: ENST00000397250.2:c.89-5576T>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380426
  ensembl transcript: ENST00000397255
  gene symbol: IL15RA
  hgvsc: ENST00000397255.3:c.283+2T>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000395113
  ensembl transcript: ENST00000429135
  gene symbol: IL15RA
  hgvsc: ENST00000429135.2:c.283+2T>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000431529
  ensembl transcript: ENST00000525219
  gene symbol: IL15RA
  hgvsc: ENST00000525219.2:c.175+2T>C
  variant of: http://identifiers.org/hgnc/5978
canonical: true
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35677
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4148
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2082
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.283+2T>C
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: South Asian
reference allele: A
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP

10-6008109-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6008109
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 6008109
    reference: chr 10
allele count: 1
allele frequency: 8.492569002123141e-6
allele num: 117750
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379972
  gene symbol: IL15RA
  hgvsc: ENST00000379972.2:n.605T>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000534292
  gene symbol: IL15RA
  hgvsc: ENST00000534292.1:n.463T>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380426
  ensembl transcript: ENST00000397255
  gene symbol: IL15RA
  hgvsc: ENST00000397255.3:c.282T>C
  hgvsp: ENST00000397255.3:c.282T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380423
  ensembl transcript: ENST00000397251
  gene symbol: IL15RA
  hgvsc: ENST00000397251.3:c.89-2305T>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380420
  ensembl transcript: ENST00000397246
  gene symbol: IL15RA
  hgvsc: ENST00000397246.3:c.174T>C
  hgvsp: ENST00000397246.3:c.174T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435454
  ensembl transcript: ENST00000528354
  gene symbol: IL15RA
  hgvsc: ENST00000528354.1:c.282T>C
  hgvsp: ENST00000528354.1:c.282T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369306
  ensembl transcript: ENST00000379971
  gene symbol: IL15RA
  hgvsc: ENST00000379971.1:c.89-5579T>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000395113
  ensembl transcript: ENST00000429135
  gene symbol: IL15RA
  hgvsc: ENST00000429135.2:c.282T>C
  hgvsp: ENST00000429135.2:c.282T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435995
  ensembl transcript: ENST00000530685
  gene symbol: IL15RA
  hgvsc: ENST00000530685.1:c.282T>C
  hgvsp: ENST00000530685.1:c.282T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000405107
  ensembl transcript: ENST00000453922
  gene symbol: IL15RA
  hgvsc: ENST00000453922.1:c.174T>C
  hgvsp: ENST00000453922.1:c.174T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000431529
  ensembl transcript: ENST00000525219
  gene symbol: IL15RA
  hgvsc: ENST00000525219.2:c.174T>C
  hgvsp: ENST00000525219.2:c.174T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000432691
  ensembl transcript: ENST00000532039
  gene symbol: IL15RA
  hgvsc: ENST00000532039.1:c.194T>C
  hgvsp: ENST00000532039.1:c.194T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369312
  ensembl transcript: ENST00000379977
  gene symbol: IL15RA
  hgvsc: ENST00000379977.3:c.282T>C
  hgvsp: ENST00000379977.3:c.282T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000532948
  gene symbol: IL15RA
  hgvsc: ENST00000532948.1:n.456T>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380422
  ensembl transcript: ENST00000397250
  gene symbol: IL15RA
  hgvsc: ENST00000397250.2:c.89-5579T>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379974
  gene symbol: IL15RA
  hgvsc: ENST00000379974.1:n.404-5579T>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380421
  ensembl transcript: ENST00000397248
  gene symbol: IL15RA
  hgvsc: ENST00000397248.2:c.174T>C
  hgvsp: ENST00000397248.2:c.174T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.282T>C
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: East Asian
population: Latino
population: South Asian
reference allele: A
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum

http://identifiers.org/exac.variant/10-6008119-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6008119
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 6008119
    reference: chr 10
allele count: 1
allele frequency: 8.399549784131571e-6
allele num: 119054
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435995
  ensembl transcript: ENST00000530685
  gene symbol: IL15RA
  hgvsc: ENST00000530685.1:c.272T>G
  hgvsp: ENSP00000435995.1:p.Leu91Arg
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000405107
  ensembl transcript: ENST00000453922
  gene symbol: IL15RA
  hgvsc: ENST00000453922.1:c.164T>G
  hgvsp: ENSP00000405107.1:p.Leu55Arg
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379972
  gene symbol: IL15RA
  hgvsc: ENST00000379972.2:n.595T>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380422
  ensembl transcript: ENST00000397250
  gene symbol: IL15RA
  hgvsc: ENST00000397250.2:c.89-5589T>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380426
  ensembl transcript: ENST00000397255
  gene symbol: IL15RA
  hgvsc: ENST00000397255.3:c.272T>G
  hgvsp: ENSP00000380426.3:p.Leu91Arg
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380420
  ensembl transcript: ENST00000397246
  gene symbol: IL15RA
  hgvsc: ENST00000397246.3:c.164T>G
  hgvsp: ENSP00000380420.3:p.Leu55Arg
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435454
  ensembl transcript: ENST00000528354
  gene symbol: IL15RA
  hgvsc: ENST00000528354.1:c.272T>G
  hgvsp: ENSP00000435454.1:p.Leu91Arg
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000432691
  ensembl transcript: ENST00000532039
  gene symbol: IL15RA
  hgvsc: ENST00000532039.1:c.184T>G
  hgvsp: ENSP00000432691.1:p.Leu62Arg
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380421
  ensembl transcript: ENST00000397248
  gene symbol: IL15RA
  hgvsc: ENST00000397248.2:c.164T>G
  hgvsp: ENSP00000380421.2:p.Leu55Arg
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000431529
  ensembl transcript: ENST00000525219
  gene symbol: IL15RA
  hgvsc: ENST00000525219.2:c.164T>G
  hgvsp: ENSP00000431529.2:p.Leu55Arg
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000532948
  gene symbol: IL15RA
  hgvsc: ENST00000532948.1:n.446T>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000534292
  gene symbol: IL15RA
  hgvsc: ENST00000534292.1:n.453T>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379974
  gene symbol: IL15RA
  hgvsc: ENST00000379974.1:n.404-5589T>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000395113
  ensembl transcript: ENST00000429135
  gene symbol: IL15RA
  hgvsc: ENST00000429135.2:c.272T>G
  hgvsp: ENSP00000395113.2:p.Leu91Arg
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369312
  ensembl transcript: ENST00000379977
  gene symbol: IL15RA
  hgvsc: ENST00000379977.3:c.272T>G
  hgvsp: ENSP00000369312.3:p.Leu91Arg
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369306
  ensembl transcript: ENST00000379971
  gene symbol: IL15RA
  hgvsc: ENST00000379971.1:c.89-5589T>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380423
  ensembl transcript: ENST00000397251
  gene symbol: IL15RA
  hgvsc: ENST00000397251.3:c.89-2315T>G
  variant of: http://identifiers.org/hgnc/5978
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15108
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36770
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu91Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: African
population: South Asian
population: European (Finnish)
reference allele: A
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff

10-6008128-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6008128
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 6008128
    reference: chr 10
allele count: 14
allele frequency: 1.168087840205584e-4
allele num: 119854
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435454
  ensembl transcript: ENST00000528354
  gene symbol: IL15RA
  hgvsc: ENST00000528354.1:c.263C>G
  hgvsp: ENSP00000435454.1:p.Thr88Ser
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000395113
  ensembl transcript: ENST00000429135
  gene symbol: IL15RA
  hgvsc: ENST00000429135.2:c.263C>G
  hgvsp: ENSP00000395113.2:p.Thr88Ser
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435995
  ensembl transcript: ENST00000530685
  gene symbol: IL15RA
  hgvsc: ENST00000530685.1:c.263C>G
  hgvsp: ENSP00000435995.1:p.Thr88Ser
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380420
  ensembl transcript: ENST00000397246
  gene symbol: IL15RA
  hgvsc: ENST00000397246.3:c.155C>G
  hgvsp: ENSP00000380420.3:p.Thr52Ser
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380426
  ensembl transcript: ENST00000397255
  gene symbol: IL15RA
  hgvsc: ENST00000397255.3:c.263C>G
  hgvsp: ENSP00000380426.3:p.Thr88Ser
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000405107
  ensembl transcript: ENST00000453922
  gene symbol: IL15RA
  hgvsc: ENST00000453922.1:c.155C>G
  hgvsp: ENSP00000405107.1:p.Thr52Ser
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380423
  ensembl transcript: ENST00000397251
  gene symbol: IL15RA
  hgvsc: ENST00000397251.3:c.89-2324C>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380421
  ensembl transcript: ENST00000397248
  gene symbol: IL15RA
  hgvsc: ENST00000397248.2:c.155C>G
  hgvsp: ENSP00000380421.2:p.Thr52Ser
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379974
  gene symbol: IL15RA
  hgvsc: ENST00000379974.1:n.404-5598C>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369312
  ensembl transcript: ENST00000379977
  gene symbol: IL15RA
  hgvsc: ENST00000379977.3:c.263C>G
  hgvsp: ENSP00000369312.3:p.Thr88Ser
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380422
  ensembl transcript: ENST00000397250
  gene symbol: IL15RA
  hgvsc: ENST00000397250.2:c.89-5598C>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000432691
  ensembl transcript: ENST00000532039
  gene symbol: IL15RA
  hgvsc: ENST00000532039.1:c.175C>G
  hgvsp: ENSP00000432691.1:p.Thr59Ser
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379972
  gene symbol: IL15RA
  hgvsc: ENST00000379972.2:n.586C>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369306
  ensembl transcript: ENST00000379971
  gene symbol: IL15RA
  hgvsc: ENST00000379971.1:c.89-5598C>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000534292
  gene symbol: IL15RA
  hgvsc: ENST00000534292.1:n.444C>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000532948
  gene symbol: IL15RA
  hgvsc: ENST00000532948.1:n.437C>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000431529
  ensembl transcript: ENST00000525219
  gene symbol: IL15RA
  hgvsc: ENST00000525219.2:c.155C>G
  hgvsp: ENSP00000431529.2:p.Thr52Ser
  variant of: http://identifiers.org/hgnc/5978
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4643
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr88Ser
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: Other
reference allele: G
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ

10-6008129-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6008129
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 6008129
    reference: chr 10
allele count: 7
allele frequency: 5.837808986889949e-5
allele num: 119908
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000405107
  ensembl transcript: ENST00000453922
  gene symbol: IL15RA
  hgvsc: ENST00000453922.1:c.154A>G
  hgvsp: ENSP00000405107.1:p.Thr52Ala
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379972
  gene symbol: IL15RA
  hgvsc: ENST00000379972.2:n.585A>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380421
  ensembl transcript: ENST00000397248
  gene symbol: IL15RA
  hgvsc: ENST00000397248.2:c.154A>G
  hgvsp: ENSP00000380421.2:p.Thr52Ala
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435995
  ensembl transcript: ENST00000530685
  gene symbol: IL15RA
  hgvsc: ENST00000530685.1:c.262A>G
  hgvsp: ENSP00000435995.1:p.Thr88Ala
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000532948
  gene symbol: IL15RA
  hgvsc: ENST00000532948.1:n.436A>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435454
  ensembl transcript: ENST00000528354
  gene symbol: IL15RA
  hgvsc: ENST00000528354.1:c.262A>G
  hgvsp: ENSP00000435454.1:p.Thr88Ala
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380426
  ensembl transcript: ENST00000397255
  gene symbol: IL15RA
  hgvsc: ENST00000397255.3:c.262A>G
  hgvsp: ENSP00000380426.3:p.Thr88Ala
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000395113
  ensembl transcript: ENST00000429135
  gene symbol: IL15RA
  hgvsc: ENST00000429135.2:c.262A>G
  hgvsp: ENSP00000395113.2:p.Thr88Ala
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000432691
  ensembl transcript: ENST00000532039
  gene symbol: IL15RA
  hgvsc: ENST00000532039.1:c.174A>G
  hgvsp: ENSP00000432691.1:p.Thr59Ala
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369312
  ensembl transcript: ENST00000379977
  gene symbol: IL15RA
  hgvsc: ENST00000379977.3:c.262A>G
  hgvsp: ENSP00000369312.3:p.Thr88Ala
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380420
  ensembl transcript: ENST00000397246
  gene symbol: IL15RA
  hgvsc: ENST00000397246.3:c.154A>G
  hgvsp: ENSP00000380420.3:p.Thr52Ala
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000431529
  ensembl transcript: ENST00000525219
  gene symbol: IL15RA
  hgvsc: ENST00000525219.2:c.154A>G
  hgvsp: ENSP00000431529.2:p.Thr52Ala
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380422
  ensembl transcript: ENST00000397250
  gene symbol: IL15RA
  hgvsc: ENST00000397250.2:c.89-5599A>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380423
  ensembl transcript: ENST00000397251
  gene symbol: IL15RA
  hgvsc: ENST00000397251.3:c.89-2325A>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000534292
  gene symbol: IL15RA
  hgvsc: ENST00000534292.1:n.443A>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379974
  gene symbol: IL15RA
  hgvsc: ENST00000379974.1:n.404-5599A>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369306
  ensembl transcript: ENST00000379971
  gene symbol: IL15RA
  hgvsc: ENST00000379971.1:c.89-5599A>G
  variant of: http://identifiers.org/hgnc/5978
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 740
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1051
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr88Ala
num of homozygotes: 1
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
reference allele: T
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: QD

10-6008132-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6008132
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 6008132
    reference: chr 10
allele count: 1
allele frequency: 8.327365388138501e-6
allele num: 120086
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435454
  ensembl transcript: ENST00000528354
  gene symbol: IL15RA
  hgvsc: ENST00000528354.1:c.259A>G
  hgvsp: ENSP00000435454.1:p.Thr87Ala
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000405107
  ensembl transcript: ENST00000453922
  gene symbol: IL15RA
  hgvsc: ENST00000453922.1:c.151A>G
  hgvsp: ENSP00000405107.1:p.Thr51Ala
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000432691
  ensembl transcript: ENST00000532039
  gene symbol: IL15RA
  hgvsc: ENST00000532039.1:c.171A>G
  hgvsp: ENSP00000432691.1:p.Thr58Ala
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435995
  ensembl transcript: ENST00000530685
  gene symbol: IL15RA
  hgvsc: ENST00000530685.1:c.259A>G
  hgvsp: ENSP00000435995.1:p.Thr87Ala
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000395113
  ensembl transcript: ENST00000429135
  gene symbol: IL15RA
  hgvsc: ENST00000429135.2:c.259A>G
  hgvsp: ENSP00000395113.2:p.Thr87Ala
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380422
  ensembl transcript: ENST00000397250
  gene symbol: IL15RA
  hgvsc: ENST00000397250.2:c.89-5602A>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379972
  gene symbol: IL15RA
  hgvsc: ENST00000379972.2:n.582A>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380423
  ensembl transcript: ENST00000397251
  gene symbol: IL15RA
  hgvsc: ENST00000397251.3:c.89-2328A>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380421
  ensembl transcript: ENST00000397248
  gene symbol: IL15RA
  hgvsc: ENST00000397248.2:c.151A>G
  hgvsp: ENSP00000380421.2:p.Thr51Ala
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000431529
  ensembl transcript: ENST00000525219
  gene symbol: IL15RA
  hgvsc: ENST00000525219.2:c.151A>G
  hgvsp: ENSP00000431529.2:p.Thr51Ala
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379974
  gene symbol: IL15RA
  hgvsc: ENST00000379974.1:n.404-5602A>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000534292
  gene symbol: IL15RA
  hgvsc: ENST00000534292.1:n.440A>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380420
  ensembl transcript: ENST00000397246
  gene symbol: IL15RA
  hgvsc: ENST00000397246.3:c.151A>G
  hgvsp: ENSP00000380420.3:p.Thr51Ala
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369306
  ensembl transcript: ENST00000379971
  gene symbol: IL15RA
  hgvsc: ENST00000379971.1:c.89-5602A>G
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380426
  ensembl transcript: ENST00000397255
  gene symbol: IL15RA
  hgvsc: ENST00000397255.3:c.259A>G
  hgvsp: ENSP00000380426.3:p.Thr87Ala
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369312
  ensembl transcript: ENST00000379977
  gene symbol: IL15RA
  hgvsc: ENST00000379977.3:c.259A>G
  hgvsp: ENSP00000369312.3:p.Thr87Ala
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000532948
  gene symbol: IL15RA
  hgvsc: ENST00000532948.1:n.433A>G
  variant of: http://identifiers.org/hgnc/5978
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15861
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4702
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36757
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr87Ala
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: T
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP

10-6008141-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6008141
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 6008141
    reference: chr 10
allele count: 12
allele frequency: 9.959002107988779e-5
allele num: 120494
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000405107
  ensembl transcript: ENST00000453922
  gene symbol: IL15RA
  hgvsc: ENST00000453922.1:c.142G>A
  hgvsp: ENSP00000405107.1:p.Ala48Thr
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000431529
  ensembl transcript: ENST00000525219
  gene symbol: IL15RA
  hgvsc: ENST00000525219.2:c.142G>A
  hgvsp: ENSP00000431529.2:p.Ala48Thr
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369306
  ensembl transcript: ENST00000379971
  gene symbol: IL15RA
  hgvsc: ENST00000379971.1:c.89-5611G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380420
  ensembl transcript: ENST00000397246
  gene symbol: IL15RA
  hgvsc: ENST00000397246.3:c.142G>A
  hgvsp: ENSP00000380420.3:p.Ala48Thr
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435995
  ensembl transcript: ENST00000530685
  gene symbol: IL15RA
  hgvsc: ENST00000530685.1:c.250G>A
  hgvsp: ENSP00000435995.1:p.Ala84Thr
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369312
  ensembl transcript: ENST00000379977
  gene symbol: IL15RA
  hgvsc: ENST00000379977.3:c.250G>A
  hgvsp: ENSP00000369312.3:p.Ala84Thr
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000534292
  gene symbol: IL15RA
  hgvsc: ENST00000534292.1:n.431G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379974
  gene symbol: IL15RA
  hgvsc: ENST00000379974.1:n.404-5611G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379972
  gene symbol: IL15RA
  hgvsc: ENST00000379972.2:n.573G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000395113
  ensembl transcript: ENST00000429135
  gene symbol: IL15RA
  hgvsc: ENST00000429135.2:c.250G>A
  hgvsp: ENSP00000395113.2:p.Ala84Thr
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435454
  ensembl transcript: ENST00000528354
  gene symbol: IL15RA
  hgvsc: ENST00000528354.1:c.250G>A
  hgvsp: ENSP00000435454.1:p.Ala84Thr
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000432691
  ensembl transcript: ENST00000532039
  gene symbol: IL15RA
  hgvsc: ENST00000532039.1:c.162G>A
  hgvsp: ENSP00000432691.1:p.Ala55Thr
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380421
  ensembl transcript: ENST00000397248
  gene symbol: IL15RA
  hgvsc: ENST00000397248.2:c.142G>A
  hgvsp: ENSP00000380421.2:p.Ala48Thr
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380422
  ensembl transcript: ENST00000397250
  gene symbol: IL15RA
  hgvsc: ENST00000397250.2:c.89-5611G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380423
  ensembl transcript: ENST00000397251
  gene symbol: IL15RA
  hgvsc: ENST00000397251.3:c.89-2337G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380426
  ensembl transcript: ENST00000397255
  gene symbol: IL15RA
  hgvsc: ENST00000397255.3:c.250G>A
  hgvsp: ENSP00000380426.3:p.Ala84Thr
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000532948
  gene symbol: IL15RA
  hgvsc: ENST00000532948.1:n.424G>A
  variant of: http://identifiers.org/hgnc/5978
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala84Thr
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: FS

10-6008148-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6008148
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 6008148
    reference: chr 10
allele count: 9
allele frequency: 7.454280413464087e-5
allele num: 120736
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000534292
  gene symbol: IL15RA
  hgvsc: ENST00000534292.1:n.424G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380421
  ensembl transcript: ENST00000397248
  gene symbol: IL15RA
  hgvsc: ENST00000397248.2:c.135G>A
  hgvsp: ENST00000397248.2:c.135G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380426
  ensembl transcript: ENST00000397255
  gene symbol: IL15RA
  hgvsc: ENST00000397255.3:c.243G>A
  hgvsp: ENST00000397255.3:c.243G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000405107
  ensembl transcript: ENST00000453922
  gene symbol: IL15RA
  hgvsc: ENST00000453922.1:c.135G>A
  hgvsp: ENST00000453922.1:c.135G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000432691
  ensembl transcript: ENST00000532039
  gene symbol: IL15RA
  hgvsc: ENST00000532039.1:c.155G>A
  hgvsp: ENST00000532039.1:c.155G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435995
  ensembl transcript: ENST00000530685
  gene symbol: IL15RA
  hgvsc: ENST00000530685.1:c.243G>A
  hgvsp: ENST00000530685.1:c.243G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369312
  ensembl transcript: ENST00000379977
  gene symbol: IL15RA
  hgvsc: ENST00000379977.3:c.243G>A
  hgvsp: ENST00000379977.3:c.243G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380420
  ensembl transcript: ENST00000397246
  gene symbol: IL15RA
  hgvsc: ENST00000397246.3:c.135G>A
  hgvsp: ENST00000397246.3:c.135G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379972
  gene symbol: IL15RA
  hgvsc: ENST00000379972.2:n.566G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000431529
  ensembl transcript: ENST00000525219
  gene symbol: IL15RA
  hgvsc: ENST00000525219.2:c.135G>A
  hgvsp: ENST00000525219.2:c.135G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435454
  ensembl transcript: ENST00000528354
  gene symbol: IL15RA
  hgvsc: ENST00000528354.1:c.243G>A
  hgvsp: ENST00000528354.1:c.243G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369306
  ensembl transcript: ENST00000379971
  gene symbol: IL15RA
  hgvsc: ENST00000379971.1:c.89-5618G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379974
  gene symbol: IL15RA
  hgvsc: ENST00000379974.1:n.404-5618G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380423
  ensembl transcript: ENST00000397251
  gene symbol: IL15RA
  hgvsc: ENST00000397251.3:c.89-2344G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380422
  ensembl transcript: ENST00000397250
  gene symbol: IL15RA
  hgvsc: ENST00000397250.2:c.89-5618G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000532948
  gene symbol: IL15RA
  hgvsc: ENST00000532948.1:n.417G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000395113
  ensembl transcript: ENST00000429135
  gene symbol: IL15RA
  hgvsc: ENST00000429135.2:c.243G>A
  hgvsp: ENST00000429135.2:c.243G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1110
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr81Thr
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: QD

10-6008149-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6008149
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 6008149
    reference: chr 10
allele count: 9
allele frequency: 7.450577833703102e-5
allele num: 120796
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379974
  gene symbol: IL15RA
  hgvsc: ENST00000379974.1:n.404-5619C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369306
  ensembl transcript: ENST00000379971
  gene symbol: IL15RA
  hgvsc: ENST00000379971.1:c.89-5619C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379972
  gene symbol: IL15RA
  hgvsc: ENST00000379972.2:n.565C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380420
  ensembl transcript: ENST00000397246
  gene symbol: IL15RA
  hgvsc: ENST00000397246.3:c.134C>T
  hgvsp: ENSP00000380420.3:p.Thr45Met
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380422
  ensembl transcript: ENST00000397250
  gene symbol: IL15RA
  hgvsc: ENST00000397250.2:c.89-5619C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435995
  ensembl transcript: ENST00000530685
  gene symbol: IL15RA
  hgvsc: ENST00000530685.1:c.242C>T
  hgvsp: ENSP00000435995.1:p.Thr81Met
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380426
  ensembl transcript: ENST00000397255
  gene symbol: IL15RA
  hgvsc: ENST00000397255.3:c.242C>T
  hgvsp: ENSP00000380426.3:p.Thr81Met
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000432691
  ensembl transcript: ENST00000532039
  gene symbol: IL15RA
  hgvsc: ENST00000532039.1:c.154C>T
  hgvsp: ENSP00000432691.1:p.Thr52Met
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000431529
  ensembl transcript: ENST00000525219
  gene symbol: IL15RA
  hgvsc: ENST00000525219.2:c.134C>T
  hgvsp: ENSP00000431529.2:p.Thr45Met
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000405107
  ensembl transcript: ENST00000453922
  gene symbol: IL15RA
  hgvsc: ENST00000453922.1:c.134C>T
  hgvsp: ENSP00000405107.1:p.Thr45Met
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369312
  ensembl transcript: ENST00000379977
  gene symbol: IL15RA
  hgvsc: ENST00000379977.3:c.242C>T
  hgvsp: ENSP00000369312.3:p.Thr81Met
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000534292
  gene symbol: IL15RA
  hgvsc: ENST00000534292.1:n.423C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380421
  ensembl transcript: ENST00000397248
  gene symbol: IL15RA
  hgvsc: ENST00000397248.2:c.134C>T
  hgvsp: ENSP00000380421.2:p.Thr45Met
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000532948
  gene symbol: IL15RA
  hgvsc: ENST00000532948.1:n.416C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380423
  ensembl transcript: ENST00000397251
  gene symbol: IL15RA
  hgvsc: ENST00000397251.3:c.89-2345C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000395113
  ensembl transcript: ENST00000429135
  gene symbol: IL15RA
  hgvsc: ENST00000429135.2:c.242C>T
  hgvsp: ENSP00000395113.2:p.Thr81Met
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435454
  ensembl transcript: ENST00000528354
  gene symbol: IL15RA
  hgvsc: ENST00000528354.1:c.242C>T
  hgvsp: ENSP00000435454.1:p.Thr81Met
  variant of: http://identifiers.org/hgnc/5978
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 36310
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4948
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr81Met
num of homozygotes: 1
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum

10-6008154-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6008154
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 6008154
    reference: chr 10
allele count: 1704
allele frequency: 1.409592508644508e-2
allele num: 120886
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000532948
  gene symbol: IL15RA
  hgvsc: ENST00000532948.1:n.411G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380421
  ensembl transcript: ENST00000397248
  gene symbol: IL15RA
  hgvsc: ENST00000397248.2:c.129G>A
  hgvsp: ENST00000397248.2:c.129G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380422
  ensembl transcript: ENST00000397250
  gene symbol: IL15RA
  hgvsc: ENST00000397250.2:c.89-5624G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000431529
  ensembl transcript: ENST00000525219
  gene symbol: IL15RA
  hgvsc: ENST00000525219.2:c.129G>A
  hgvsp: ENST00000525219.2:c.129G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435454
  ensembl transcript: ENST00000528354
  gene symbol: IL15RA
  hgvsc: ENST00000528354.1:c.237G>A
  hgvsp: ENST00000528354.1:c.237G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379974
  gene symbol: IL15RA
  hgvsc: ENST00000379974.1:n.404-5624G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000405107
  ensembl transcript: ENST00000453922
  gene symbol: IL15RA
  hgvsc: ENST00000453922.1:c.129G>A
  hgvsp: ENST00000453922.1:c.129G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380420
  ensembl transcript: ENST00000397246
  gene symbol: IL15RA
  hgvsc: ENST00000397246.3:c.129G>A
  hgvsp: ENST00000397246.3:c.129G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435995
  ensembl transcript: ENST00000530685
  gene symbol: IL15RA
  hgvsc: ENST00000530685.1:c.237G>A
  hgvsp: ENST00000530685.1:c.237G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000534292
  gene symbol: IL15RA
  hgvsc: ENST00000534292.1:n.418G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000432691
  ensembl transcript: ENST00000532039
  gene symbol: IL15RA
  hgvsc: ENST00000532039.1:c.149G>A
  hgvsp: ENST00000532039.1:c.149G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380426
  ensembl transcript: ENST00000397255
  gene symbol: IL15RA
  hgvsc: ENST00000397255.3:c.237G>A
  hgvsp: ENST00000397255.3:c.237G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369312
  ensembl transcript: ENST00000379977
  gene symbol: IL15RA
  hgvsc: ENST00000379977.3:c.237G>A
  hgvsp: ENST00000379977.3:c.237G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369306
  ensembl transcript: ENST00000379971
  gene symbol: IL15RA
  hgvsc: ENST00000379971.1:c.89-5624G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380423
  ensembl transcript: ENST00000397251
  gene symbol: IL15RA
  hgvsc: ENST00000397251.3:c.89-2350G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000395113
  ensembl transcript: ENST00000429135
  gene symbol: IL15RA
  hgvsc: ENST00000429135.2:c.237G>A
  hgvsp: ENST00000429135.2:c.237G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379972
  gene symbol: IL15RA
  hgvsc: ENST00000379972.2:n.560G>A
  variant of: http://identifiers.org/hgnc/5978
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 5.25e1
  variant carriers: 219
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 6.75e1
  variant carriers: 50
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 9.75e1
  variant carriers: 43
genotype quality: GenotypeQuality
hgvs: p.Lys79Lys
num of homozygotes: 55
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
population: Latino
population: African
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD

10-6008163-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6008163
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 6008163
    reference: chr 10
allele count: 29
allele frequency: 2.396773447056101e-4
allele num: 120996
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000405107
  ensembl transcript: ENST00000453922
  gene symbol: IL15RA
  hgvsc: ENST00000453922.1:c.120G>C
  hgvsp: ENST00000453922.1:c.120G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380423
  ensembl transcript: ENST00000397251
  gene symbol: IL15RA
  hgvsc: ENST00000397251.3:c.89-2359G>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000532948
  gene symbol: IL15RA
  hgvsc: ENST00000532948.1:n.402G>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000431529
  ensembl transcript: ENST00000525219
  gene symbol: IL15RA
  hgvsc: ENST00000525219.2:c.120G>C
  hgvsp: ENST00000525219.2:c.120G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380426
  ensembl transcript: ENST00000397255
  gene symbol: IL15RA
  hgvsc: ENST00000397255.3:c.228G>C
  hgvsp: ENST00000397255.3:c.228G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435995
  ensembl transcript: ENST00000530685
  gene symbol: IL15RA
  hgvsc: ENST00000530685.1:c.228G>C
  hgvsp: ENST00000530685.1:c.228G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000395113
  ensembl transcript: ENST00000429135
  gene symbol: IL15RA
  hgvsc: ENST00000429135.2:c.228G>C
  hgvsp: ENST00000429135.2:c.228G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380421
  ensembl transcript: ENST00000397248
  gene symbol: IL15RA
  hgvsc: ENST00000397248.2:c.120G>C
  hgvsp: ENST00000397248.2:c.120G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380420
  ensembl transcript: ENST00000397246
  gene symbol: IL15RA
  hgvsc: ENST00000397246.3:c.120G>C
  hgvsp: ENST00000397246.3:c.120G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379972
  gene symbol: IL15RA
  hgvsc: ENST00000379972.2:n.551G>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000432691
  ensembl transcript: ENST00000532039
  gene symbol: IL15RA
  hgvsc: ENST00000532039.1:c.140G>C
  hgvsp: ENST00000532039.1:c.140G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369312
  ensembl transcript: ENST00000379977
  gene symbol: IL15RA
  hgvsc: ENST00000379977.3:c.228G>C
  hgvsp: ENST00000379977.3:c.228G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369306
  ensembl transcript: ENST00000379971
  gene symbol: IL15RA
  hgvsc: ENST00000379971.1:c.89-5633G>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379974
  gene symbol: IL15RA
  hgvsc: ENST00000379974.1:n.404-5633G>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380422
  ensembl transcript: ENST00000397250
  gene symbol: IL15RA
  hgvsc: ENST00000397250.2:c.89-5633G>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435454
  ensembl transcript: ENST00000528354
  gene symbol: IL15RA
  hgvsc: ENST00000528354.1:c.228G>C
  hgvsp: ENST00000528354.1:c.228G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000534292
  gene symbol: IL15RA
  hgvsc: ENST00000534292.1:n.409G>C
  variant of: http://identifiers.org/hgnc/5978
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 358
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val76Val
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: BaseQRankSum

10-6008163-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6008163
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 6008163
    reference: chr 10
allele count: 1
allele frequency: 8.264736024331383e-6
allele num: 120996
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379974
  gene symbol: IL15RA
  hgvsc: ENST00000379974.1:n.404-5633G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000432691
  ensembl transcript: ENST00000532039
  gene symbol: IL15RA
  hgvsc: ENST00000532039.1:c.140G>A
  hgvsp: ENST00000532039.1:c.140G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380423
  ensembl transcript: ENST00000397251
  gene symbol: IL15RA
  hgvsc: ENST00000397251.3:c.89-2359G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435995
  ensembl transcript: ENST00000530685
  gene symbol: IL15RA
  hgvsc: ENST00000530685.1:c.228G>A
  hgvsp: ENST00000530685.1:c.228G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369312
  ensembl transcript: ENST00000379977
  gene symbol: IL15RA
  hgvsc: ENST00000379977.3:c.228G>A
  hgvsp: ENST00000379977.3:c.228G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000431529
  ensembl transcript: ENST00000525219
  gene symbol: IL15RA
  hgvsc: ENST00000525219.2:c.120G>A
  hgvsp: ENST00000525219.2:c.120G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369306
  ensembl transcript: ENST00000379971
  gene symbol: IL15RA
  hgvsc: ENST00000379971.1:c.89-5633G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380422
  ensembl transcript: ENST00000397250
  gene symbol: IL15RA
  hgvsc: ENST00000397250.2:c.89-5633G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380420
  ensembl transcript: ENST00000397246
  gene symbol: IL15RA
  hgvsc: ENST00000397246.3:c.120G>A
  hgvsp: ENST00000397246.3:c.120G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000405107
  ensembl transcript: ENST00000453922
  gene symbol: IL15RA
  hgvsc: ENST00000453922.1:c.120G>A
  hgvsp: ENST00000453922.1:c.120G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000532948
  gene symbol: IL15RA
  hgvsc: ENST00000532948.1:n.402G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000534292
  gene symbol: IL15RA
  hgvsc: ENST00000534292.1:n.409G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000395113
  ensembl transcript: ENST00000429135
  gene symbol: IL15RA
  hgvsc: ENST00000429135.2:c.228G>A
  hgvsp: ENST00000429135.2:c.228G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380426
  ensembl transcript: ENST00000397255
  gene symbol: IL15RA
  hgvsc: ENST00000397255.3:c.228G>A
  hgvsp: ENST00000397255.3:c.228G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379972
  gene symbol: IL15RA
  hgvsc: ENST00000379972.2:n.551G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435454
  ensembl transcript: ENST00000528354
  gene symbol: IL15RA
  hgvsc: ENST00000528354.1:c.228G>A
  hgvsp: ENST00000528354.1:c.228G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380421
  ensembl transcript: ENST00000397248
  gene symbol: IL15RA
  hgvsc: ENST00000397248.2:c.120G>A
  hgvsp: ENST00000397248.2:c.120G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5242
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val76Val
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: Latino
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum

10-6008165-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6008165
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 6008165
    reference: chr 10
allele count: 70
allele frequency: 5.784741504693905e-4
allele num: 121008
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000432691
  ensembl transcript: ENST00000532039
  gene symbol: IL15RA
  hgvsc: ENST00000532039.1:c.138G>A
  hgvsp: ENSP00000432691.1:p.Val47Met
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000534292
  gene symbol: IL15RA
  hgvsc: ENST00000534292.1:n.407G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380423
  ensembl transcript: ENST00000397251
  gene symbol: IL15RA
  hgvsc: ENST00000397251.3:c.89-2361G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369312
  ensembl transcript: ENST00000379977
  gene symbol: IL15RA
  hgvsc: ENST00000379977.3:c.226G>A
  hgvsp: ENSP00000369312.3:p.Val76Met
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000532948
  gene symbol: IL15RA
  hgvsc: ENST00000532948.1:n.400G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369306
  ensembl transcript: ENST00000379971
  gene symbol: IL15RA
  hgvsc: ENST00000379971.1:c.89-5635G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380421
  ensembl transcript: ENST00000397248
  gene symbol: IL15RA
  hgvsc: ENST00000397248.2:c.118G>A
  hgvsp: ENSP00000380421.2:p.Val40Met
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379974
  gene symbol: IL15RA
  hgvsc: ENST00000379974.1:n.404-5635G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435995
  ensembl transcript: ENST00000530685
  gene symbol: IL15RA
  hgvsc: ENST00000530685.1:c.226G>A
  hgvsp: ENSP00000435995.1:p.Val76Met
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435454
  ensembl transcript: ENST00000528354
  gene symbol: IL15RA
  hgvsc: ENST00000528354.1:c.226G>A
  hgvsp: ENSP00000435454.1:p.Val76Met
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380420
  ensembl transcript: ENST00000397246
  gene symbol: IL15RA
  hgvsc: ENST00000397246.3:c.118G>A
  hgvsp: ENSP00000380420.3:p.Val40Met
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000405107
  ensembl transcript: ENST00000453922
  gene symbol: IL15RA
  hgvsc: ENST00000453922.1:c.118G>A
  hgvsp: ENSP00000405107.1:p.Val40Met
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380422
  ensembl transcript: ENST00000397250
  gene symbol: IL15RA
  hgvsc: ENST00000397250.2:c.89-5635G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000431529
  ensembl transcript: ENST00000525219
  gene symbol: IL15RA
  hgvsc: ENST00000525219.2:c.118G>A
  hgvsp: ENSP00000431529.2:p.Val40Met
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380426
  ensembl transcript: ENST00000397255
  gene symbol: IL15RA
  hgvsc: ENST00000397255.3:c.226G>A
  hgvsp: ENSP00000380426.3:p.Val76Met
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379972
  gene symbol: IL15RA
  hgvsc: ENST00000379972.2:n.549G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000395113
  ensembl transcript: ENST00000429135
  gene symbol: IL15RA
  hgvsc: ENST00000429135.2:c.226G>A
  hgvsp: ENSP00000395113.2:p.Val76Met
  variant of: http://identifiers.org/hgnc/5978
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 4.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1223
  bin: 3.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
hgvs: p.Val76Met
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: Other
population: Latino
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum

10-6008166-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6008166
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 6008166
    reference: chr 10
allele count: 2
allele frequency: 1.652892561983471e-5
allele num: 121000
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369306
  ensembl transcript: ENST00000379971
  gene symbol: IL15RA
  hgvsc: ENST00000379971.1:c.89-5636C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379974
  gene symbol: IL15RA
  hgvsc: ENST00000379974.1:n.404-5636C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000395113
  ensembl transcript: ENST00000429135
  gene symbol: IL15RA
  hgvsc: ENST00000429135.2:c.225C>T
  hgvsp: ENST00000429135.2:c.225C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380422
  ensembl transcript: ENST00000397250
  gene symbol: IL15RA
  hgvsc: ENST00000397250.2:c.89-5636C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000431529
  ensembl transcript: ENST00000525219
  gene symbol: IL15RA
  hgvsc: ENST00000525219.2:c.117C>T
  hgvsp: ENST00000525219.2:c.117C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000432691
  ensembl transcript: ENST00000532039
  gene symbol: IL15RA
  hgvsc: ENST00000532039.1:c.137C>T
  hgvsp: ENST00000532039.1:c.137C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435995
  ensembl transcript: ENST00000530685
  gene symbol: IL15RA
  hgvsc: ENST00000530685.1:c.225C>T
  hgvsp: ENST00000530685.1:c.225C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369312
  ensembl transcript: ENST00000379977
  gene symbol: IL15RA
  hgvsc: ENST00000379977.3:c.225C>T
  hgvsp: ENST00000379977.3:c.225C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000405107
  ensembl transcript: ENST00000453922
  gene symbol: IL15RA
  hgvsc: ENST00000453922.1:c.117C>T
  hgvsp: ENST00000453922.1:c.117C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380420
  ensembl transcript: ENST00000397246
  gene symbol: IL15RA
  hgvsc: ENST00000397246.3:c.117C>T
  hgvsp: ENST00000397246.3:c.117C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380423
  ensembl transcript: ENST00000397251
  gene symbol: IL15RA
  hgvsc: ENST00000397251.3:c.89-2362C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435454
  ensembl transcript: ENST00000528354
  gene symbol: IL15RA
  hgvsc: ENST00000528354.1:c.225C>T
  hgvsp: ENST00000528354.1:c.225C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380421
  ensembl transcript: ENST00000397248
  gene symbol: IL15RA
  hgvsc: ENST00000397248.2:c.117C>T
  hgvsp: ENST00000397248.2:c.117C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380426
  ensembl transcript: ENST00000397255
  gene symbol: IL15RA
  hgvsc: ENST00000397255.3:c.225C>T
  hgvsp: ENST00000397255.3:c.225C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000532948
  gene symbol: IL15RA
  hgvsc: ENST00000532948.1:n.399C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000534292
  gene symbol: IL15RA
  hgvsc: ENST00000534292.1:n.406C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379972
  gene symbol: IL15RA
  hgvsc: ENST00000379972.2:n.548C>T
  variant of: http://identifiers.org/hgnc/5978
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17298
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34928
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Cys75Cys
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: Other
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP

10-6008168-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6008168
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 6008168
    reference: chr 10
allele count: 1
allele frequency: 8.261458643138033e-6
allele num: 121044
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379972
  gene symbol: IL15RA
  hgvsc: ENST00000379972.2:n.546T>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000395113
  ensembl transcript: ENST00000429135
  gene symbol: IL15RA
  hgvsc: ENST00000429135.2:c.223T>C
  hgvsp: ENSP00000395113.2:p.Cys75Arg
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369312
  ensembl transcript: ENST00000379977
  gene symbol: IL15RA
  hgvsc: ENST00000379977.3:c.223T>C
  hgvsp: ENSP00000369312.3:p.Cys75Arg
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000432691
  ensembl transcript: ENST00000532039
  gene symbol: IL15RA
  hgvsc: ENST00000532039.1:c.135T>C
  hgvsp: ENSP00000432691.1:p.Cys46Arg
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000405107
  ensembl transcript: ENST00000453922
  gene symbol: IL15RA
  hgvsc: ENST00000453922.1:c.115T>C
  hgvsp: ENSP00000405107.1:p.Cys39Arg
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380426
  ensembl transcript: ENST00000397255
  gene symbol: IL15RA
  hgvsc: ENST00000397255.3:c.223T>C
  hgvsp: ENSP00000380426.3:p.Cys75Arg
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380420
  ensembl transcript: ENST00000397246
  gene symbol: IL15RA
  hgvsc: ENST00000397246.3:c.115T>C
  hgvsp: ENSP00000380420.3:p.Cys39Arg
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379974
  gene symbol: IL15RA
  hgvsc: ENST00000379974.1:n.404-5638T>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000431529
  ensembl transcript: ENST00000525219
  gene symbol: IL15RA
  hgvsc: ENST00000525219.2:c.115T>C
  hgvsp: ENSP00000431529.2:p.Cys39Arg
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000534292
  gene symbol: IL15RA
  hgvsc: ENST00000534292.1:n.404T>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435454
  ensembl transcript: ENST00000528354
  gene symbol: IL15RA
  hgvsc: ENST00000528354.1:c.223T>C
  hgvsp: ENSP00000435454.1:p.Cys75Arg
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380421
  ensembl transcript: ENST00000397248
  gene symbol: IL15RA
  hgvsc: ENST00000397248.2:c.115T>C
  hgvsp: ENSP00000380421.2:p.Cys39Arg
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000532948
  gene symbol: IL15RA
  hgvsc: ENST00000532948.1:n.397T>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380423
  ensembl transcript: ENST00000397251
  gene symbol: IL15RA
  hgvsc: ENST00000397251.3:c.89-2364T>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380422
  ensembl transcript: ENST00000397250
  gene symbol: IL15RA
  hgvsc: ENST00000397250.2:c.89-5638T>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435995
  ensembl transcript: ENST00000530685
  gene symbol: IL15RA
  hgvsc: ENST00000530685.1:c.223T>C
  hgvsp: ENSP00000435995.1:p.Cys75Arg
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369306
  ensembl transcript: ENST00000379971
  gene symbol: IL15RA
  hgvsc: ENST00000379971.1:c.89-5638T>C
  variant of: http://identifiers.org/hgnc/5978
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Cys75Arg
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: ReadPosRankSum

10-6008169-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6008169
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 6008169
    reference: chr 10
allele count: 2
allele frequency: 1.652319029758266e-5
allele num: 121042
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380426
  ensembl transcript: ENST00000397255
  gene symbol: IL15RA
  hgvsc: ENST00000397255.3:c.222G>C
  hgvsp: ENSP00000380426.3:p.Glu74Asp
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000432691
  ensembl transcript: ENST00000532039
  gene symbol: IL15RA
  hgvsc: ENST00000532039.1:c.134G>C
  hgvsp: ENSP00000432691.1:p.Glu45Asp
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000405107
  ensembl transcript: ENST00000453922
  gene symbol: IL15RA
  hgvsc: ENST00000453922.1:c.114G>C
  hgvsp: ENSP00000405107.1:p.Glu38Asp
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380421
  ensembl transcript: ENST00000397248
  gene symbol: IL15RA
  hgvsc: ENST00000397248.2:c.114G>C
  hgvsp: ENSP00000380421.2:p.Glu38Asp
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380422
  ensembl transcript: ENST00000397250
  gene symbol: IL15RA
  hgvsc: ENST00000397250.2:c.89-5639G>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369306
  ensembl transcript: ENST00000379971
  gene symbol: IL15RA
  hgvsc: ENST00000379971.1:c.89-5639G>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000534292
  gene symbol: IL15RA
  hgvsc: ENST00000534292.1:n.403G>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369312
  ensembl transcript: ENST00000379977
  gene symbol: IL15RA
  hgvsc: ENST00000379977.3:c.222G>C
  hgvsp: ENSP00000369312.3:p.Glu74Asp
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380420
  ensembl transcript: ENST00000397246
  gene symbol: IL15RA
  hgvsc: ENST00000397246.3:c.114G>C
  hgvsp: ENSP00000380420.3:p.Glu38Asp
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435995
  ensembl transcript: ENST00000530685
  gene symbol: IL15RA
  hgvsc: ENST00000530685.1:c.222G>C
  hgvsp: ENSP00000435995.1:p.Glu74Asp
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379972
  gene symbol: IL15RA
  hgvsc: ENST00000379972.2:n.545G>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379974
  gene symbol: IL15RA
  hgvsc: ENST00000379974.1:n.404-5639G>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435454
  ensembl transcript: ENST00000528354
  gene symbol: IL15RA
  hgvsc: ENST00000528354.1:c.222G>C
  hgvsp: ENSP00000435454.1:p.Glu74Asp
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000532948
  gene symbol: IL15RA
  hgvsc: ENST00000532948.1:n.396G>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000395113
  ensembl transcript: ENST00000429135
  gene symbol: IL15RA
  hgvsc: ENST00000429135.2:c.222G>C
  hgvsp: ENSP00000395113.2:p.Glu74Asp
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380423
  ensembl transcript: ENST00000397251
  gene symbol: IL15RA
  hgvsc: ENST00000397251.3:c.89-2365G>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000431529
  ensembl transcript: ENST00000525219
  gene symbol: IL15RA
  hgvsc: ENST00000525219.2:c.114G>C
  hgvsp: ENSP00000431529.2:p.Glu38Asp
  variant of: http://identifiers.org/hgnc/5978
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5298
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34813
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu74Asp
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ClippingRankSum

10-6008169-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6008169
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 6008169
    reference: chr 10
allele count: 1
allele frequency: 8.261595148791329e-6
allele num: 121042
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379972
  gene symbol: IL15RA
  hgvsc: ENST00000379972.2:n.545G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000432691
  ensembl transcript: ENST00000532039
  gene symbol: IL15RA
  hgvsc: ENST00000532039.1:c.134G>A
  hgvsp: ENST00000532039.1:c.134G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380426
  ensembl transcript: ENST00000397255
  gene symbol: IL15RA
  hgvsc: ENST00000397255.3:c.222G>A
  hgvsp: ENST00000397255.3:c.222G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000534292
  gene symbol: IL15RA
  hgvsc: ENST00000534292.1:n.403G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000532948
  gene symbol: IL15RA
  hgvsc: ENST00000532948.1:n.396G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369306
  ensembl transcript: ENST00000379971
  gene symbol: IL15RA
  hgvsc: ENST00000379971.1:c.89-5639G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380420
  ensembl transcript: ENST00000397246
  gene symbol: IL15RA
  hgvsc: ENST00000397246.3:c.114G>A
  hgvsp: ENST00000397246.3:c.114G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000405107
  ensembl transcript: ENST00000453922
  gene symbol: IL15RA
  hgvsc: ENST00000453922.1:c.114G>A
  hgvsp: ENST00000453922.1:c.114G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000395113
  ensembl transcript: ENST00000429135
  gene symbol: IL15RA
  hgvsc: ENST00000429135.2:c.222G>A
  hgvsp: ENST00000429135.2:c.222G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369312
  ensembl transcript: ENST00000379977
  gene symbol: IL15RA
  hgvsc: ENST00000379977.3:c.222G>A
  hgvsp: ENST00000379977.3:c.222G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435995
  ensembl transcript: ENST00000530685
  gene symbol: IL15RA
  hgvsc: ENST00000530685.1:c.222G>A
  hgvsp: ENST00000530685.1:c.222G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380421
  ensembl transcript: ENST00000397248
  gene symbol: IL15RA
  hgvsc: ENST00000397248.2:c.114G>A
  hgvsp: ENST00000397248.2:c.114G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379974
  gene symbol: IL15RA
  hgvsc: ENST00000379974.1:n.404-5639G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435454
  ensembl transcript: ENST00000528354
  gene symbol: IL15RA
  hgvsc: ENST00000528354.1:c.222G>A
  hgvsp: ENST00000528354.1:c.222G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000431529
  ensembl transcript: ENST00000525219
  gene symbol: IL15RA
  hgvsc: ENST00000525219.2:c.114G>A
  hgvsp: ENST00000525219.2:c.114G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380422
  ensembl transcript: ENST00000397250
  gene symbol: IL15RA
  hgvsc: ENST00000397250.2:c.89-5639G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380423
  ensembl transcript: ENST00000397251
  gene symbol: IL15RA
  hgvsc: ENST00000397251.3:c.89-2365G>A
  variant of: http://identifiers.org/hgnc/5978
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34813
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17456
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu74Glu
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP

10-6008172-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6008172
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 6008172
    reference: chr 10
allele count: 19467
allele frequency: 1.609241960816731e-1
allele num: 120970
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380421
  ensembl transcript: ENST00000397248
  gene symbol: IL15RA
  hgvsc: ENST00000397248.2:c.111G>A
  hgvsp: ENST00000397248.2:c.111G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369306
  ensembl transcript: ENST00000379971
  gene symbol: IL15RA
  hgvsc: ENST00000379971.1:c.89-5642G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380423
  ensembl transcript: ENST00000397251
  gene symbol: IL15RA
  hgvsc: ENST00000397251.3:c.89-2368G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435454
  ensembl transcript: ENST00000528354
  gene symbol: IL15RA
  hgvsc: ENST00000528354.1:c.219G>A
  hgvsp: ENST00000528354.1:c.219G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000395113
  ensembl transcript: ENST00000429135
  gene symbol: IL15RA
  hgvsc: ENST00000429135.2:c.219G>A
  hgvsp: ENST00000429135.2:c.219G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000431529
  ensembl transcript: ENST00000525219
  gene symbol: IL15RA
  hgvsc: ENST00000525219.2:c.111G>A
  hgvsp: ENST00000525219.2:c.111G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000534292
  gene symbol: IL15RA
  hgvsc: ENST00000534292.1:n.400G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000405107
  ensembl transcript: ENST00000453922
  gene symbol: IL15RA
  hgvsc: ENST00000453922.1:c.111G>A
  hgvsp: ENST00000453922.1:c.111G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380422
  ensembl transcript: ENST00000397250
  gene symbol: IL15RA
  hgvsc: ENST00000397250.2:c.89-5642G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435995
  ensembl transcript: ENST00000530685
  gene symbol: IL15RA
  hgvsc: ENST00000530685.1:c.219G>A
  hgvsp: ENST00000530685.1:c.219G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380420
  ensembl transcript: ENST00000397246
  gene symbol: IL15RA
  hgvsc: ENST00000397246.3:c.111G>A
  hgvsp: ENST00000397246.3:c.111G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000432691
  ensembl transcript: ENST00000532039
  gene symbol: IL15RA
  hgvsc: ENST00000532039.1:c.131G>A
  hgvsp: ENST00000532039.1:c.131G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379972
  gene symbol: IL15RA
  hgvsc: ENST00000379972.2:n.542G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000532948
  gene symbol: IL15RA
  hgvsc: ENST00000532948.1:n.393G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369312
  ensembl transcript: ENST00000379977
  gene symbol: IL15RA
  hgvsc: ENST00000379977.3:c.219G>A
  hgvsp: ENST00000379977.3:c.219G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380426
  ensembl transcript: ENST00000397255
  gene symbol: IL15RA
  hgvsc: ENST00000397255.3:c.219G>A
  hgvsp: ENST00000397255.3:c.219G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379974
  gene symbol: IL15RA
  hgvsc: ENST00000379974.1:n.404-5642G>A
  variant of: http://identifiers.org/hgnc/5978
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2522
  bin: 4.25e1
  variant carriers: 2189
genotype depth: GenotypeDepth
  all individuals: 1470
  bin: 5.75e1
  variant carriers: 1403
genotype depth: GenotypeDepth
  all individuals: 25151
  bin: 2.25e1
  variant carriers: 404
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 1.25e1
  variant carriers: 23
genotype quality: GenotypeQuality
hgvs: p.Thr73Thr
num of homozygotes: 1882
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: C
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: QD

10-6008173-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6008173
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 6008173
    reference: chr 10
allele count: 6
allele frequency: 4.952701698776683e-5
allele num: 121146
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435995
  ensembl transcript: ENST00000530685
  gene symbol: IL15RA
  hgvsc: ENST00000530685.1:c.218C>T
  hgvsp: ENSP00000435995.1:p.Thr73Met
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000534292
  gene symbol: IL15RA
  hgvsc: ENST00000534292.1:n.399C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000532948
  gene symbol: IL15RA
  hgvsc: ENST00000532948.1:n.392C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380422
  ensembl transcript: ENST00000397250
  gene symbol: IL15RA
  hgvsc: ENST00000397250.2:c.89-5643C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379974
  gene symbol: IL15RA
  hgvsc: ENST00000379974.1:n.404-5643C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380423
  ensembl transcript: ENST00000397251
  gene symbol: IL15RA
  hgvsc: ENST00000397251.3:c.89-2369C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369306
  ensembl transcript: ENST00000379971
  gene symbol: IL15RA
  hgvsc: ENST00000379971.1:c.89-5643C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000432691
  ensembl transcript: ENST00000532039
  gene symbol: IL15RA
  hgvsc: ENST00000532039.1:c.130C>T
  hgvsp: ENSP00000432691.1:p.Thr44Met
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435454
  ensembl transcript: ENST00000528354
  gene symbol: IL15RA
  hgvsc: ENST00000528354.1:c.218C>T
  hgvsp: ENSP00000435454.1:p.Thr73Met
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369312
  ensembl transcript: ENST00000379977
  gene symbol: IL15RA
  hgvsc: ENST00000379977.3:c.218C>T
  hgvsp: ENSP00000369312.3:p.Thr73Met
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000395113
  ensembl transcript: ENST00000429135
  gene symbol: IL15RA
  hgvsc: ENST00000429135.2:c.218C>T
  hgvsp: ENSP00000395113.2:p.Thr73Met
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380420
  ensembl transcript: ENST00000397246
  gene symbol: IL15RA
  hgvsc: ENST00000397246.3:c.110C>T
  hgvsp: ENSP00000380420.3:p.Thr37Met
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000405107
  ensembl transcript: ENST00000453922
  gene symbol: IL15RA
  hgvsc: ENST00000453922.1:c.110C>T
  hgvsp: ENSP00000405107.1:p.Thr37Met
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380421
  ensembl transcript: ENST00000397248
  gene symbol: IL15RA
  hgvsc: ENST00000397248.2:c.110C>T
  hgvsp: ENSP00000380421.2:p.Thr37Met
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380426
  ensembl transcript: ENST00000397255
  gene symbol: IL15RA
  hgvsc: ENST00000397255.3:c.218C>T
  hgvsp: ENSP00000380426.3:p.Thr73Met
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379972
  gene symbol: IL15RA
  hgvsc: ENST00000379972.2:n.541C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000431529
  ensembl transcript: ENST00000525219
  gene symbol: IL15RA
  hgvsc: ENST00000525219.2:c.110C>T
  hgvsp: ENSP00000431529.2:p.Thr37Met
  variant of: http://identifiers.org/hgnc/5978
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27163
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr73Met
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum

10-6008175-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6008175
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 6008175
    reference: chr 10
allele count: 1
allele frequency: 8.254230293025175e-6
allele num: 121150
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380422
  ensembl transcript: ENST00000397250
  gene symbol: IL15RA
  hgvsc: ENST00000397250.2:c.89-5645G>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000405107
  ensembl transcript: ENST00000453922
  gene symbol: IL15RA
  hgvsc: ENST00000453922.1:c.108G>C
  hgvsp: ENST00000453922.1:c.108G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000432691
  ensembl transcript: ENST00000532039
  gene symbol: IL15RA
  hgvsc: ENST00000532039.1:c.128G>C
  hgvsp: ENST00000532039.1:c.128G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369312
  ensembl transcript: ENST00000379977
  gene symbol: IL15RA
  hgvsc: ENST00000379977.3:c.216G>C
  hgvsp: ENST00000379977.3:c.216G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000431529
  ensembl transcript: ENST00000525219
  gene symbol: IL15RA
  hgvsc: ENST00000525219.2:c.108G>C
  hgvsp: ENST00000525219.2:c.108G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000534292
  gene symbol: IL15RA
  hgvsc: ENST00000534292.1:n.397G>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000532948
  gene symbol: IL15RA
  hgvsc: ENST00000532948.1:n.390G>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369306
  ensembl transcript: ENST00000379971
  gene symbol: IL15RA
  hgvsc: ENST00000379971.1:c.89-5645G>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435995
  ensembl transcript: ENST00000530685
  gene symbol: IL15RA
  hgvsc: ENST00000530685.1:c.216G>C
  hgvsp: ENST00000530685.1:c.216G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379974
  gene symbol: IL15RA
  hgvsc: ENST00000379974.1:n.404-5645G>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380421
  ensembl transcript: ENST00000397248
  gene symbol: IL15RA
  hgvsc: ENST00000397248.2:c.108G>C
  hgvsp: ENST00000397248.2:c.108G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380423
  ensembl transcript: ENST00000397251
  gene symbol: IL15RA
  hgvsc: ENST00000397251.3:c.89-2371G>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380420
  ensembl transcript: ENST00000397246
  gene symbol: IL15RA
  hgvsc: ENST00000397246.3:c.108G>C
  hgvsp: ENST00000397246.3:c.108G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379972
  gene symbol: IL15RA
  hgvsc: ENST00000379972.2:n.539G>C
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435454
  ensembl transcript: ENST00000528354
  gene symbol: IL15RA
  hgvsc: ENST00000528354.1:c.216G>C
  hgvsp: ENST00000528354.1:c.216G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380426
  ensembl transcript: ENST00000397255
  gene symbol: IL15RA
  hgvsc: ENST00000397255.3:c.216G>C
  hgvsp: ENST00000397255.3:c.216G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000395113
  ensembl transcript: ENST00000429135
  gene symbol: IL15RA
  hgvsc: ENST00000429135.2:c.216G>C
  hgvsp: ENST00000429135.2:c.216G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu72Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: African
population: South Asian
reference allele: C
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum

10-6008178-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6008178
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 6008178
    reference: chr 10
allele count: 2
allele frequency: 1.650628063978344e-5
allele num: 121166
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369312
  ensembl transcript: ENST00000379977
  gene symbol: IL15RA
  hgvsc: ENST00000379977.3:c.213C>T
  hgvsp: ENST00000379977.3:c.213C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380422
  ensembl transcript: ENST00000397250
  gene symbol: IL15RA
  hgvsc: ENST00000397250.2:c.89-5648C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435995
  ensembl transcript: ENST00000530685
  gene symbol: IL15RA
  hgvsc: ENST00000530685.1:c.213C>T
  hgvsp: ENST00000530685.1:c.213C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380426
  ensembl transcript: ENST00000397255
  gene symbol: IL15RA
  hgvsc: ENST00000397255.3:c.213C>T
  hgvsp: ENST00000397255.3:c.213C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000432691
  ensembl transcript: ENST00000532039
  gene symbol: IL15RA
  hgvsc: ENST00000532039.1:c.125C>T
  hgvsp: ENST00000532039.1:c.125C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000431529
  ensembl transcript: ENST00000525219
  gene symbol: IL15RA
  hgvsc: ENST00000525219.2:c.105C>T
  hgvsp: ENST00000525219.2:c.105C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380421
  ensembl transcript: ENST00000397248
  gene symbol: IL15RA
  hgvsc: ENST00000397248.2:c.105C>T
  hgvsp: ENST00000397248.2:c.105C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435454
  ensembl transcript: ENST00000528354
  gene symbol: IL15RA
  hgvsc: ENST00000528354.1:c.213C>T
  hgvsp: ENST00000528354.1:c.213C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369306
  ensembl transcript: ENST00000379971
  gene symbol: IL15RA
  hgvsc: ENST00000379971.1:c.89-5648C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000405107
  ensembl transcript: ENST00000453922
  gene symbol: IL15RA
  hgvsc: ENST00000453922.1:c.105C>T
  hgvsp: ENST00000453922.1:c.105C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379972
  gene symbol: IL15RA
  hgvsc: ENST00000379972.2:n.536C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380420
  ensembl transcript: ENST00000397246
  gene symbol: IL15RA
  hgvsc: ENST00000397246.3:c.105C>T
  hgvsp: ENST00000397246.3:c.105C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379974
  gene symbol: IL15RA
  hgvsc: ENST00000379974.1:n.404-5648C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000532948
  gene symbol: IL15RA
  hgvsc: ENST00000532948.1:n.387C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380423
  ensembl transcript: ENST00000397251
  gene symbol: IL15RA
  hgvsc: ENST00000397251.3:c.89-2374C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000534292
  gene symbol: IL15RA
  hgvsc: ENST00000534292.1:n.394C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000395113
  ensembl transcript: ENST00000429135
  gene symbol: IL15RA
  hgvsc: ENST00000429135.2:c.213C>T
  hgvsp: ENST00000429135.2:c.213C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1771
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7587
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser71Ser
num of homozygotes: 0
population: East Asian
population: South Asian
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP

10-6008181-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6008181
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 6008181
    reference: chr 10
allele count: 1
allele frequency: 8.253140319891718e-6
allele num: 121166
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000534292
  gene symbol: IL15RA
  hgvsc: ENST00000534292.1:n.391C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000405107
  ensembl transcript: ENST00000453922
  gene symbol: IL15RA
  hgvsc: ENST00000453922.1:c.102C>T
  hgvsp: ENST00000453922.1:c.102C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379974
  gene symbol: IL15RA
  hgvsc: ENST00000379974.1:n.404-5651C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435454
  ensembl transcript: ENST00000528354
  gene symbol: IL15RA
  hgvsc: ENST00000528354.1:c.210C>T
  hgvsp: ENST00000528354.1:c.210C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379972
  gene symbol: IL15RA
  hgvsc: ENST00000379972.2:n.533C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435995
  ensembl transcript: ENST00000530685
  gene symbol: IL15RA
  hgvsc: ENST00000530685.1:c.210C>T
  hgvsp: ENST00000530685.1:c.210C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380426
  ensembl transcript: ENST00000397255
  gene symbol: IL15RA
  hgvsc: ENST00000397255.3:c.210C>T
  hgvsp: ENST00000397255.3:c.210C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000395113
  ensembl transcript: ENST00000429135
  gene symbol: IL15RA
  hgvsc: ENST00000429135.2:c.210C>T
  hgvsp: ENST00000429135.2:c.210C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000532948
  gene symbol: IL15RA
  hgvsc: ENST00000532948.1:n.384C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380420
  ensembl transcript: ENST00000397246
  gene symbol: IL15RA
  hgvsc: ENST00000397246.3:c.102C>T
  hgvsp: ENST00000397246.3:c.102C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380423
  ensembl transcript: ENST00000397251
  gene symbol: IL15RA
  hgvsc: ENST00000397251.3:c.89-2377C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380421
  ensembl transcript: ENST00000397248
  gene symbol: IL15RA
  hgvsc: ENST00000397248.2:c.102C>T
  hgvsp: ENST00000397248.2:c.102C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000432691
  ensembl transcript: ENST00000532039
  gene symbol: IL15RA
  hgvsc: ENST00000532039.1:c.122C>T
  hgvsp: ENST00000532039.1:c.122C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369306
  ensembl transcript: ENST00000379971
  gene symbol: IL15RA
  hgvsc: ENST00000379971.1:c.89-5651C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369312
  ensembl transcript: ENST00000379977
  gene symbol: IL15RA
  hgvsc: ENST00000379977.3:c.210C>T
  hgvsp: ENST00000379977.3:c.210C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000431529
  ensembl transcript: ENST00000525219
  gene symbol: IL15RA
  hgvsc: ENST00000525219.2:c.102C>T
  hgvsp: ENST00000525219.2:c.102C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380422
  ensembl transcript: ENST00000397250
  gene symbol: IL15RA
  hgvsc: ENST00000397250.2:c.89-5651C>T
  variant of: http://identifiers.org/hgnc/5978
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 410
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27168
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser70Ser
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum

10-6008184-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6008184
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 6008184
    reference: chr 10
allele count: 243
allele frequency: 2.005314496030633e-3
allele num: 121178
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000431529
  ensembl transcript: ENST00000525219
  gene symbol: IL15RA
  hgvsc: ENST00000525219.2:c.99G>A
  hgvsp: ENST00000525219.2:c.99G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000432691
  ensembl transcript: ENST00000532039
  gene symbol: IL15RA
  hgvsc: ENST00000532039.1:c.119G>A
  hgvsp: ENST00000532039.1:c.119G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380423
  ensembl transcript: ENST00000397251
  gene symbol: IL15RA
  hgvsc: ENST00000397251.3:c.89-2380G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435995
  ensembl transcript: ENST00000530685
  gene symbol: IL15RA
  hgvsc: ENST00000530685.1:c.207G>A
  hgvsp: ENST00000530685.1:c.207G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000534292
  gene symbol: IL15RA
  hgvsc: ENST00000534292.1:n.388G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000405107
  ensembl transcript: ENST00000453922
  gene symbol: IL15RA
  hgvsc: ENST00000453922.1:c.99G>A
  hgvsp: ENST00000453922.1:c.99G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380420
  ensembl transcript: ENST00000397246
  gene symbol: IL15RA
  hgvsc: ENST00000397246.3:c.99G>A
  hgvsp: ENST00000397246.3:c.99G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380421
  ensembl transcript: ENST00000397248
  gene symbol: IL15RA
  hgvsc: ENST00000397248.2:c.99G>A
  hgvsp: ENST00000397248.2:c.99G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369312
  ensembl transcript: ENST00000379977
  gene symbol: IL15RA
  hgvsc: ENST00000379977.3:c.207G>A
  hgvsp: ENST00000379977.3:c.207G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380426
  ensembl transcript: ENST00000397255
  gene symbol: IL15RA
  hgvsc: ENST00000397255.3:c.207G>A
  hgvsp: ENST00000397255.3:c.207G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379972
  gene symbol: IL15RA
  hgvsc: ENST00000379972.2:n.530G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369306
  ensembl transcript: ENST00000379971
  gene symbol: IL15RA
  hgvsc: ENST00000379971.1:c.89-5654G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435454
  ensembl transcript: ENST00000528354
  gene symbol: IL15RA
  hgvsc: ENST00000528354.1:c.207G>A
  hgvsp: ENST00000528354.1:c.207G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000395113
  ensembl transcript: ENST00000429135
  gene symbol: IL15RA
  hgvsc: ENST00000429135.2:c.207G>A
  hgvsp: ENST00000429135.2:c.207G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379974
  gene symbol: IL15RA
  hgvsc: ENST00000379974.1:n.404-5654G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000532948
  gene symbol: IL15RA
  hgvsc: ENST00000532948.1:n.381G>A
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380422
  ensembl transcript: ENST00000397250
  gene symbol: IL15RA
  hgvsc: ENST00000397250.2:c.89-5654G>A
  variant of: http://identifiers.org/hgnc/5978
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 21995
  bin: 2.75e1
  variant carriers: 10
genotype quality: GenotypeQuality
hgvs: p.Thr69Thr
num of homozygotes: 4
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: MQ

10-6008185-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 6008185
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 6008185
    reference: chr 10
allele count: 1
allele frequency: 8.252323028932645e-6
allele num: 121178
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380426
  ensembl transcript: ENST00000397255
  gene symbol: IL15RA
  hgvsc: ENST00000397255.3:c.206C>T
  hgvsp: ENSP00000380426.3:p.Thr69Met
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000432691
  ensembl transcript: ENST00000532039
  gene symbol: IL15RA
  hgvsc: ENST00000532039.1:c.118C>T
  hgvsp: ENSP00000432691.1:p.Thr40Met
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000532948
  gene symbol: IL15RA
  hgvsc: ENST00000532948.1:n.380C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000534292
  gene symbol: IL15RA
  hgvsc: ENST00000534292.1:n.387C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000435995
  ensembl transcript: ENST00000530685
  gene symbol: IL15RA
  hgvsc: ENST00000530685.1:c.206C>T
  hgvsp: ENSP00000435995.1:p.Thr69Met
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000431529
  ensembl transcript: ENST00000525219
  gene symbol: IL15RA
  hgvsc: ENST00000525219.2:c.98C>T
  hgvsp: ENSP00000431529.2:p.Thr33Met
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000134470
  ensembl transcript: ENST00000379972
  gene symbol: IL15RA
  hgvsc: ENST00000379972.2:n.529C>T
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380421
  ensembl transcript: ENST00000397248
  gene symbol: IL15RA
  hgvsc: ENST00000397248.2:c.98C>T
  hgvsp: ENSP00000380421.2:p.Thr33Met
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000369312
  ensembl transcript: ENST00000379977
  gene symbol: IL15RA
  hgvsc: ENST00000379977.3:c.206C>T
  hgvsp: ENSP00000369312.3:p.Thr69Met
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000405107
  ensembl transcript: ENST00000453922
  gene symbol: IL15RA
  hgvsc: ENST00000453922.1:c.98C>T
  hgvsp: ENSP00000405107.1:p.Thr33Met
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380420
  ensembl transcript: ENST00000397246
  gene symbol: IL15RA
  hgvsc: ENST00000397246.3:c.98C>T
  hgvsp: ENSP00000380420.3:p.Thr33Met
  variant of: http://identifiers.org/hgnc/5978
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000134470
  ensembl protein: ENSP00000380422
  ensembl transcript: ENST00000397250
  gene symbol: IL15RA
  hgvsc: ENST00000397250.2:c.89-5655C>T
  variant of: http://identifiers.org/hgnc/5978
canonical: true
consequence: missense
filter: PASS
hgvs: p.Thr69Met
num of homozygotes: 0
reference allele: G

GenotypeDepth
all individuals: 8433
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 765
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 568
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 154
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 95
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 10812
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 133
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 208
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 166
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 78
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 272
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 64
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 77
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 395
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28786
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3291
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4671
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 225
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4299
bin: 3.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.601896645628424e-5
allele num: 62426
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8240
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 6.805498843065197e-5
allele num: 14694
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5638
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 808
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9788
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.06e-1

QD
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ReadPosRankSum
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MQRankSum
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MQ
type: SiteQuality
SIO_000300: 5.911e1

VQSLOD
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SIO_000300: -1.32e-2

FS
type: SiteQuality
SIO_000300: 1.611e0

BaseQRankSum
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SIO_000300: 1.06e0

DP
type: SiteQuality
SIO_000300: 1.314118e6

InbreedingCoeff
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SIO_000300: -1.2e-3

GenotypeDepth
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bin: 2.75e1
variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 806
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.596576939042693e-5
allele num: 62634
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5658
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 10920
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9798
num of homozygotes: 0

MQ
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SIO_000300: 6.0e1

ReadPosRankSum
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QD
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InbreedingCoeff
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BaseQRankSum
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SIO_000300: 7.36e-1

MQRankSum
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SIO_000300: 7.36e-1

ClippingRankSum
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SIO_000300: -7.36e-1

FS
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SIO_000300: 1.582e0

VQSLOD
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SIO_000300: 6.56e-1

DP
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SIO_000300: 1.323378e6

GenotypeDepth
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bin: 2.5e0
variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 814
num of homozygotes: 0

African
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allele count: 1
allele frequency: 1.016466761536898e-4
allele num: 9838
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8300
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 62950
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.887e1

FS
type: SiteQuality
SIO_000300: 1.082e0

InbreedingCoeff
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SIO_000300: -2.0e-4

ClippingRankSum
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MQRankSum
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SIO_000300: -6.68e-1

VQSLOD
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SIO_000300: -9.516e-1

ReadPosRankSum
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SIO_000300: -3.61e-1

BaseQRankSum
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SIO_000300: 3.05e0

QD
type: SiteQuality
SIO_000300: 9.289999999999999e0

DP
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SIO_000300: 1.36531e6

GenotypeDepth
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bin: 8.25e1
variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8322
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 816
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 1
allele frequency: 1.75377060680463e-4
allele num: 5702
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.391091e6

MQRankSum
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InbreedingCoeff
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BaseQRankSum
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ClippingRankSum
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MQ
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ReadPosRankSum
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QD
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VQSLOD
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FS
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15294
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5750
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.564602434521388e-5
allele num: 63914
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.447379e6

ReadPosRankSum
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MQRankSum
type: SiteQuality
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ClippingRankSum
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FS
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InbreedingCoeff
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BaseQRankSum
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VQSLOD
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MQ
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QD
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64756
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11216
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.372673973999491e-5
allele num: 15692
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 846
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.909e1

BaseQRankSum
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SIO_000300: 2.69e0

MQRankSum
type: SiteQuality
SIO_000300: 2.57e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.259e0

QD
type: SiteQuality
SIO_000300: 8.789999999999999e0

InbreedingCoeff
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SIO_000300: 3.6e-3

FS
type: SiteQuality
SIO_000300: 1.2993e1

DP
type: SiteQuality
SIO_000300: 1.488449e6

VQSLOD
type: SiteQuality
SIO_000300: -2.772e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.26e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8516
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.543733983759918e-5
allele num: 64778
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

QD
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SIO_000300: 1.075e1

InbreedingCoeff
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VQSLOD
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MQ
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SIO_000300: 6.0e1

MQRankSum
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BaseQRankSum
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SIO_000300: -1.606e0

ReadPosRankSum
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ClippingRankSum
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SIO_000300: -7.7e-2

FS
type: SiteQuality
SIO_000300: 3.149e0

DP
type: SiteQuality
SIO_000300: 1.489823e6

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11206
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8518
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5846
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64836
num of homozygotes: 0

African
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allele count: 1
allele frequency: 1.000400160064026e-4
allele num: 9996
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.36e-1

InbreedingCoeff
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SIO_000300: 3.7e-3

BaseQRankSum
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SIO_000300: -1.398e0

DP
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SIO_000300: 1.492745e6

QD
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SIO_000300: 1.004e1

VQSLOD
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ClippingRankSum
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SIO_000300: 1.47e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -6.1e-2

FS
type: SiteQuality
SIO_000300: 1.5509e1

GenotypeDepth
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variant carriers: 1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5846
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.912655971479501e-5
allele num: 11220
num of homozygotes: 0

African
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allele count: 8
allele frequency: 8.003201280512205e-4
allele num: 9996
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 842
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ReadPosRankSum
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SIO_000300: 2.36e-1

DP
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ClippingRankSum
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MQRankSum
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InbreedingCoeff
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BaseQRankSum
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MQ
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VQSLOD
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FS
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QD
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SIO_000300: 1.213e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10000
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East Asian
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allele count: 0
allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11246
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.540737088623197e-5
allele num: 64904
num of homozygotes: 0

ClippingRankSum
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FS
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MQ
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MQRankSum
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ReadPosRankSum
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BaseQRankSum
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DP
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QD
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VQSLOD
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InbreedingCoeff
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8524
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele num: 15798
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64934
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
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InbreedingCoeff
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DP
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ClippingRankSum
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FS
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ReadPosRankSum
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MQRankSum
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VQSLOD
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QD
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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East Asian
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African
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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South Asian
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European (Non-Finnish)
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Latino
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BaseQRankSum
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ClippingRankSum
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ReadPosRankSum
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FS
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MQ
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QD
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InbreedingCoeff
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MQRankSum
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VQSLOD
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DP
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GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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African
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European (Finnish)
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East Asian
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European (Non-Finnish)
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South Asian
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Latino
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MQRankSum
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QD
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FS
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ReadPosRankSum
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InbreedingCoeff
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BaseQRankSum
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ClippingRankSum
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DP
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MQ
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VQSLOD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Non-Finnish)
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European (Finnish)
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South Asian
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East Asian
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allele count: 0
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Latino
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Other
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QD
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SIO_000300: 1.113e1

MQRankSum
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FS
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InbreedingCoeff
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VQSLOD
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MQ
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ReadPosRankSum
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ClippingRankSum
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DP
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BaseQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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East Asian
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Latino
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African
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European (Finnish)
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Other
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South Asian
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VQSLOD
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ReadPosRankSum
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DP
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BaseQRankSum
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MQ
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InbreedingCoeff
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QD
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MQRankSum
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ClippingRankSum
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FS
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
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European (Non-Finnish)
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Other
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South Asian
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East Asian
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European (Finnish)
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African
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BaseQRankSum
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MQ
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ClippingRankSum
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InbreedingCoeff
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QD
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FS
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MQRankSum
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ReadPosRankSum
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DP
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64256
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 5634
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9854
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.804728388377549e-4
allele num: 11082
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8486
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15608
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.06e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.52e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.7e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.771e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.67e-1

FS
type: SiteQuality
SIO_000300: 6.41e-1

DP
type: SiteQuality
SIO_000300: 1.489739e6

QD
type: SiteQuality
SIO_000300: 7.53e0

GenotypeDepth
all individuals: 77
bin: 9.25e1
variant carriers: 0

GenotypeDepth
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variant carriers: 1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 17

GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11066
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15580
num of homozygotes: 0

African
type: Population
allele count: 17
allele frequency: 1.727642276422764e-3
allele num: 9840
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5626
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 842
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8464
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64148
num of homozygotes: 0

InbreedingCoeff
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SIO_000300: 1.5e-3

VQSLOD
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MQRankSum
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SIO_000300: -1.25e-1

FS
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SIO_000300: 0.0e0

BaseQRankSum
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SIO_000300: -3.98e-1

ReadPosRankSum
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SIO_000300: 1.77e-1

QD
type: SiteQuality
SIO_000300: 1.222e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.610000000000001e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.486849e6

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8450
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.04649900488511e-5
allele num: 11054
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5616
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 838
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.56045190687223e-5
allele num: 64084
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9836
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15556
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.848e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.66e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.81e-1

DP
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SIO_000300: 1.485048e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.6e-1

InbreedingCoeff
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SIO_000300: 2.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 3.95e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -6.006e-1

QD
type: SiteQuality
SIO_000300: 1.063e1

GenotypeDepth
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bin: 4.75e1
variant carriers: 43

GenotypeDepth
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variant carriers: 60

GenotypeDepth
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variant carriers: 18

GenotypeDepth
all individuals: 161
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variant carriers: 10

GenotypeDepth
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variant carriers: 68

GenotypeDepth
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variant carriers: 12

GenotypeDepth
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variant carriers: 22

GenotypeDepth
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variant carriers: 74

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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variant carriers: 7

GenotypeDepth
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variant carriers: 28

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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variant carriers: 463

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 680
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variant carriers: 2

Latino
type: Population
allele count: 3
allele frequency: 2.718868950516585e-4
allele num: 11034
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 247
allele frequency: 3.858289855978006e-3
allele num: 64018
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 4
allele frequency: 7.147962830593281e-4
allele num: 5596
num of homozygotes: 0

African
type: Population
allele count: 13
allele frequency: 1.322751322751323e-3
allele num: 9828
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 842
num of homozygotes: 0

East Asian
type: Population
allele count: 190
allele frequency: 2.251184834123223e-2
allele num: 8440
num of homozygotes: 3

South Asian
type: Population
allele count: 17
allele frequency: 1.094655505473278e-3
allele num: 15530
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.9e-1

QD
type: SiteQuality
SIO_000300: 1.206e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.8e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.599999999999999e-2

InbreedingCoeff
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SIO_000300: 1.15e-2

BaseQRankSum
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SIO_000300: -3.01e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.08e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 5.22e-1

DP
type: SiteQuality
SIO_000300: 1.490478e6

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 37419
bin: 6.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61390
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5230
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 806
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9498
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8050
num of homozygotes: 0

South Asian
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allele count: 3
allele frequency: 2.000800320128051e-4
allele num: 14994
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.39e0

FS
type: SiteQuality
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QD
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DP
type: SiteQuality
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ClippingRankSum
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MQ
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BaseQRankSum
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MQRankSum
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SIO_000300: -3.3e-2

InbreedingCoeff
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SIO_000300: -1.0e-3

VQSLOD
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SIO_000300: -1.092e0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 3734
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7978
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14876
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60884
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10262
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.061796559779146e-4
allele num: 9418
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5166
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 794
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.17e-1

MQRankSum
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SIO_000300: -4.58e-1

DP
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SIO_000300: 1.403899e6

QD
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SIO_000300: 9.5e0

FS
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ReadPosRankSum
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SIO_000300: 6.69e-1

MQ
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SIO_000300: 6.0e1

VQSLOD
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SIO_000300: 1.24e0

InbreedingCoeff
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SIO_000300: -1.3e-3

BaseQRankSum
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SIO_000300: -4.58e-1

GenotypeDepth
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variant carriers: 6

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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European (Finnish)
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European (Non-Finnish)
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allele frequency: 7.51653638003608e-4
allele num: 53216
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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African
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allele frequency: 2.373605506764776e-4
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South Asian
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East Asian
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MQRankSum
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BaseQRankSum
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InbreedingCoeff
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MQ
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DP
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VQSLOD
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FS
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ClippingRankSum
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QD
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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East Asian
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African
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Other
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European (Non-Finnish)
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South Asian
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FS
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SIO_000300: 0.0e0

ReadPosRankSum
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DP
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ClippingRankSum
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InbreedingCoeff
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MQRankSum
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MQ
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VQSLOD
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QD
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BaseQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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num of homozygotes: 0

Other
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European (Finnish)
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num of homozygotes: 0

Latino
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South Asian
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num of homozygotes: 0

East Asian
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European (Non-Finnish)
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InbreedingCoeff
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BaseQRankSum
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QD
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FS
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MQ
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MQRankSum
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VQSLOD
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ClippingRankSum
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DP
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele num: 47104
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African
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Other
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European (Finnish)
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South Asian
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East Asian
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num of homozygotes: 0

Latino
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MQ
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ClippingRankSum
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MQRankSum
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ReadPosRankSum
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DP
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InbreedingCoeff
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FS
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QD
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BaseQRankSum
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VQSLOD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Other
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European (Finnish)
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African
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East Asian
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European (Non-Finnish)
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Latino
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ClippingRankSum
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MQRankSum
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InbreedingCoeff
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FS
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VQSLOD
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QD
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MQ
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ReadPosRankSum
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DP
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BaseQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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European (Non-Finnish)
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allele frequency: 4.86050354816759e-5
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num of homozygotes: 0

Other
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African
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South Asian
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East Asian
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VQSLOD
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ReadPosRankSum
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MQRankSum
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FS
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DP
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MQ
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BaseQRankSum
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InbreedingCoeff
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QD
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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South Asian
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European (Non-Finnish)
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European (Finnish)
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Latino
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African
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Other
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MQ
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ReadPosRankSum
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InbreedingCoeff
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DP
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FS
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QD
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BaseQRankSum
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VQSLOD
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MQRankSum
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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African
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allele num: 8892
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Latino
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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East Asian
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MQ
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VQSLOD
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FS
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MQRankSum
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DP
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InbreedingCoeff
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BaseQRankSum
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QD
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ClippingRankSum
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Non-Finnish)
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European (Finnish)
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Latino
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African
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allele num: 9006
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Other
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East Asian
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MQ
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FS
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MQRankSum
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VQSLOD
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InbreedingCoeff
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ClippingRankSum
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BaseQRankSum
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QD
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DP
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Latino
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East Asian
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African
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European (Non-Finnish)
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European (Finnish)
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ClippingRankSum
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InbreedingCoeff
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MQ
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FS
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MQRankSum
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ReadPosRankSum
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BaseQRankSum
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DP
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VQSLOD
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QD
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GenotypeDepth
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GenotypeDepth
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East Asian
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South Asian
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European (Non-Finnish)
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African
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European (Finnish)
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MQ
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FS
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MQRankSum
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QD
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ReadPosRankSum
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ClippingRankSum
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DP
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VQSLOD
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InbreedingCoeff
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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South Asian
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Latino
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African
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Other
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East Asian
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European (Finnish)
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FS
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BaseQRankSum
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ReadPosRankSum
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MQRankSum
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InbreedingCoeff
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QD
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MQ
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DP
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VQSLOD
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele num: 9104
num of homozygotes: 0

European (Finnish)
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Other
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South Asian
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Latino
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East Asian
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European (Non-Finnish)
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InbreedingCoeff
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MQRankSum
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ClippingRankSum
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VQSLOD
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DP
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BaseQRankSum
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MQ
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QD
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FS
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele num: 10576
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East Asian
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African
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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South Asian
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Other
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BaseQRankSum
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SIO_000300: 1.47e0

ClippingRankSum
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SIO_000300: 1.89e-1

VQSLOD
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MQ
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QD
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DP
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MQRankSum
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FS
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InbreedingCoeff
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SIO_000300: -1.3e-3

ReadPosRankSum
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SIO_000300: -4.9e-2

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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South Asian
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Latino
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East Asian
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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European (Non-Finnish)
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Other
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FS
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VQSLOD
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MQ
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QD
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MQRankSum
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ReadPosRankSum
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BaseQRankSum
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DP
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ClippingRankSum
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InbreedingCoeff
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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num of homozygotes: 0

European (Non-Finnish)
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South Asian
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Other
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European (Finnish)
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East Asian
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Latino
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InbreedingCoeff
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MQRankSum
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ClippingRankSum
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FS
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VQSLOD
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ReadPosRankSum
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BaseQRankSum
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QD
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MQ
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Non-Finnish)
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South Asian
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Other
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Latino
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East Asian
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European (Finnish)
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MQRankSum
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BaseQRankSum
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VQSLOD
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MQ
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ClippingRankSum
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FS
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InbreedingCoeff
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ReadPosRankSum
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QD
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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African
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European (Non-Finnish)
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East Asian
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Other
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South Asian
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FS
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QD
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InbreedingCoeff
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BaseQRankSum
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ClippingRankSum
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MQ
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MQRankSum
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ReadPosRankSum
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VQSLOD
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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African
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Other
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East Asian
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Latino
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South Asian
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ReadPosRankSum
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VQSLOD
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MQ
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MQRankSum
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FS
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QD
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DP
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InbreedingCoeff
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele frequency: 1.519248883352071e-5
allele num: 65822
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Other
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Latino
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East Asian
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African
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South Asian
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European (Finnish)
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QD
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FS
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BaseQRankSum
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MQRankSum
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ClippingRankSum
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DP
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ReadPosRankSum
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MQ
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VQSLOD
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InbreedingCoeff
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Finnish)
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European (Non-Finnish)
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African
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Latino
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South Asian
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Other
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FS
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QD
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VQSLOD
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MQRankSum
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ClippingRankSum
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DP
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ReadPosRankSum
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BaseQRankSum
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InbreedingCoeff
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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South Asian
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European (Finnish)
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European (Non-Finnish)
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Latino
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East Asian
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ClippingRankSum
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MQRankSum
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BaseQRankSum
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VQSLOD
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FS
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DP
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MQ
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 544
bin: 8.75e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11438
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6438
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16164
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10326
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66192
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.11358574610245e-3
allele num: 898
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.096e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
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SIO_000300: 3.71e-1

MQ
type: SiteQuality
SIO_000300: 5.948e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.8e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.172e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.11e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.43e-1

DP
type: SiteQuality
SIO_000300: 1.471772e6

GenotypeDepth
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bin: 3.25e1
variant carriers: 0

GenotypeDepth
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bin: 4.75e1
variant carriers: 2

GenotypeDepth
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bin: 1.75e1
variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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bin: 4.25e1
variant carriers: 4

GenotypeDepth
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 1
allele frequency: 1.108647450110865e-3
allele num: 902
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.66183574879227e-5
allele num: 10350
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157943492357573e-4
allele num: 8636
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11468
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6478
num of homozygotes: 0

European (Non-Finnish)
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allele count: 9
allele frequency: 1.356116083536751e-4
allele num: 66366
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16294
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.941e1

BaseQRankSum
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SIO_000300: -1.361e0

InbreedingCoeff
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SIO_000300: -2.0e-4

ClippingRankSum
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SIO_000300: -6.0e-2

DP
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ReadPosRankSum
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SIO_000300: 5.82e-1

QD
type: SiteQuality
SIO_000300: 1.104e1

MQRankSum
type: SiteQuality
SIO_000300: 2.01e-1

VQSLOD
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SIO_000300: 2.81e0

FS
type: SiteQuality
SIO_000300: 1.225e0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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variant carriers: 2

GenotypeDepth
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variant carriers: 2

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 9

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 106
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11478
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.106194690265487e-3
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.053106664660749e-4
allele num: 66470
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.646922631680494e-5
allele num: 10366
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6496
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16384
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -4.14e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.789e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 8.599999999999999e-2

DP
type: SiteQuality
SIO_000300: 1.487822e6

VQSLOD
type: SiteQuality
SIO_000300: 3.87e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.14e-1

FS
type: SiteQuality
SIO_000300: 1.123e0

QD
type: SiteQuality
SIO_000300: 1.231e1

GenotypeDepth
all individuals: 7
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 4
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variant carriers: 1

GenotypeDepth
all individuals: 302
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
all individuals: 435
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GenotypeDepth
all individuals: 1103
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variant carriers: 2

GenotypeDepth
all individuals: 32
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variant carriers: 1

GenotypeDepth
all individuals: 300
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variant carriers: 0

GenotypeDepth
all individuals: 2
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GenotypeDepth
all individuals: 0
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
all individuals: 2
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 90
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GenotypeQuality
all individuals: 1014
bin: 9.75e1
variant carriers: 7

Latino
type: Population
allele count: 1
allele frequency: 8.704735376044568e-5
allele num: 11488
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8638
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6504
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.21921482565228e-4
allele num: 16404
num of homozygotes: 1

African
type: Population
allele count: 5
allele frequency: 4.823461315840247e-4
allele num: 10366
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503940323647958e-5
allele num: 66492
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.951e1

MQRankSum
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SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.4e-2

DP
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SIO_000300: 1.488969e6

VQSLOD
type: SiteQuality
SIO_000300: 2.67e0

QD
type: SiteQuality
SIO_000300: 1.44e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.74e-2

FS
type: SiteQuality
SIO_000300: 1.097e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.45e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.59e-1

GenotypeDepth
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variant carriers: 214

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2292
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variant carriers: 2

GenotypeQuality
all individuals: 132
bin: 5.25e1
variant carriers: 2

European (Finnish)
type: Population
allele count: 3
allele frequency: 4.599816007359706e-4
allele num: 6522
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 271
allele frequency: 4.073595286053573e-3
allele num: 66526
num of homozygotes: 1

Other
type: Population
allele count: 4
allele frequency: 4.424778761061947e-3
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 285
allele frequency: 1.734842951059167e-2
allele num: 16428
num of homozygotes: 8

East Asian
type: Population
allele count: 236
allele frequency: 2.731481481481482e-2
allele num: 8640
num of homozygotes: 3

Latino
type: Population
allele count: 874
allele frequency: 7.602644398051496e-2
allele num: 11496
num of homozygotes: 43

African
type: Population
allele count: 31
allele frequency: 2.989392478302797e-3
allele num: 10370
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.03e-2

MQ
type: SiteQuality
SIO_000300: 5.965e1

VQSLOD
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ClippingRankSum
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FS
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SIO_000300: 5.24e-1

ReadPosRankSum
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SIO_000300: 3.2e-1

MQRankSum
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SIO_000300: 1.65e-1

BaseQRankSum
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SIO_000300: -1.291e0

DP
type: SiteQuality
SIO_000300: 1.532271e6

QD
type: SiteQuality
SIO_000300: 1.356e1

GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 7179
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GenotypeQuality
all individuals: 1462
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11520
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10374
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6530
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66566
num of homozygotes: 0

East Asian
type: Population
allele count: 29
allele frequency: 3.355704697986577e-3
allele num: 8642
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16458
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
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VQSLOD
type: SiteQuality
SIO_000300: 2.91e0

FS
type: SiteQuality
SIO_000300: 5.31e-1

ClippingRankSum
type: SiteQuality
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InbreedingCoeff
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SIO_000300: 4.6e-3

MQRankSum
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ReadPosRankSum
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SIO_000300: 2.63e-1

QD
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DP
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MQ
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BaseQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Non-Finnish)
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East Asian
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African
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Other
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Latino
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European (Finnish)
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InbreedingCoeff
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QD
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ReadPosRankSum
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VQSLOD
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DP
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MQ
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BaseQRankSum
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FS
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ClippingRankSum
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MQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Finnish)
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East Asian
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Other
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Latino
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South Asian
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VQSLOD
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DP
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QD
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BaseQRankSum
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ClippingRankSum
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MQRankSum
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FS
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MQ
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InbreedingCoeff
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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East Asian
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African
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Latino
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European (Finnish)
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Other
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South Asian
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InbreedingCoeff
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FS
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QD
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MQRankSum
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MQ
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ReadPosRankSum
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ClippingRankSum
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VQSLOD
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BaseQRankSum
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Latino
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East Asian
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Other
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European (Finnish)
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European (Non-Finnish)
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South Asian
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ClippingRankSum
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FS
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MQRankSum
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DP
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InbreedingCoeff
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VQSLOD
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BaseQRankSum
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QD
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MQ
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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European (Finnish)
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Latino
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South Asian
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European (Non-Finnish)
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Other
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BaseQRankSum
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MQRankSum
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MQ
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ReadPosRankSum
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QD
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VQSLOD
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InbreedingCoeff
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FS
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DP
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 10382
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.50195253829979e-5
allele num: 66580
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6532
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.2e-2

QD
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VQSLOD
type: SiteQuality
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FS
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SIO_000300: 3.359e0

ReadPosRankSum
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SIO_000300: 8.699999999999999e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -6.830000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.7e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.74e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.51185e6

GenotypeDepth
all individuals: 315
bin: 8.75e1
variant carriers: 315

GenotypeDepth
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bin: 2.75e1
variant carriers: 903

GenotypeDepth
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bin: 5.25e1
variant carriers: 1734

GenotypeDepth
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bin: 9.25e1
variant carriers: 260

GenotypeDepth
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variant carriers: 2017

GenotypeDepth
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bin: 6.25e1
variant carriers: 1088

GenotypeDepth
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variant carriers: 3

GenotypeDepth
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variant carriers: 134

GenotypeDepth
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variant carriers: 1555

GenotypeDepth
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variant carriers: 469

GenotypeDepth
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variant carriers: 2035

GenotypeDepth
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variant carriers: 1349

GenotypeDepth
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GenotypeDepth
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variant carriers: 584

GenotypeDepth
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variant carriers: 782

GenotypeQuality
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variant carriers: 46

GenotypeQuality
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GenotypeQuality
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variant carriers: 49

GenotypeQuality
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variant carriers: 16

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 20

GenotypeQuality
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bin: 9.75e1
variant carriers: 17147

European (Finnish)
type: Population
allele count: 765
allele frequency: 1.17115737905695e-1
allele num: 6532
num of homozygotes: 43

East Asian
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allele count: 2680
allele frequency: 3.110492107706592e-1
allele num: 8616
num of homozygotes: 423

South Asian
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allele count: 2307
allele frequency: 1.400218499635834e-1
allele num: 16476
num of homozygotes: 197

African
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allele count: 1727
allele frequency: 1.664097128541145e-1
allele num: 10378
num of homozygotes: 159

European (Non-Finnish)
type: Population
allele count: 8613
allele frequency: 1.294137091684948e-1
allele num: 66554
num of homozygotes: 576

Latino
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allele count: 3243
allele frequency: 2.818039624608968e-1
allele num: 11508
num of homozygotes: 470

Other
type: Population
allele count: 132
allele frequency: 1.456953642384106e-1
allele num: 906
num of homozygotes: 14

VQSLOD
type: SiteQuality
SIO_000300: 4.7e0

DP
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SIO_000300: 2.031534e6

ClippingRankSum
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SIO_000300: -3.4e-1

ReadPosRankSum
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SIO_000300: 3.59e-1

MQRankSum
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SIO_000300: 8.3e-2

InbreedingCoeff
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SIO_000300: 3.53e-2

BaseQRankSum
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SIO_000300: 1.02e0

FS
type: SiteQuality
SIO_000300: 5.22e-1

MQ
type: SiteQuality
SIO_000300: 5.961e1

QD
type: SiteQuality
SIO_000300: 1.601e1

GenotypeDepth
all individuals: 4
bin: 8.25e1
variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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variant carriers: 1

GenotypeDepth
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variant carriers: 2

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 44930
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.001290554938624e-5
allele num: 66638
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 2.426301103967002e-4
allele num: 16486
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6538
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.95e1

VQSLOD
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SIO_000300: 1.77e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.68e-1

DP
type: SiteQuality
SIO_000300: 1.576893e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 2.72e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.47e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.201e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.05e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 209
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GenotypeQuality
all individuals: 1102
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66636
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6544
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
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South Asian
type: Population
allele count: 1
allele frequency: 6.066488716330988e-5
allele num: 16484
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.576353e6

MQRankSum
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SIO_000300: 5.41e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
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SIO_000300: -9.0e-2

InbreedingCoeff
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QD
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VQSLOD
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SIO_000300: 8.51e-1

BaseQRankSum
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SIO_000300: -1.79e-1

FS
type: SiteQuality
SIO_000300: 7.99e-1

ReadPosRankSum
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SIO_000300: 1.52e0

GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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African
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6544
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66646
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Latino
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allele count: 2
allele frequency: 1.732201628269531e-4
allele num: 11546
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.04e0

FS
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MQ
type: SiteQuality
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VQSLOD
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ClippingRankSum
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ReadPosRankSum
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MQRankSum
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QD
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InbreedingCoeff
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6544
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.156871818602499e-4
allele num: 8644
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66644
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.34e-1

FS
type: SiteQuality
SIO_000300: 5.957e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -2.577e-1

QD
type: SiteQuality
SIO_000300: 9.609999999999999e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.029e0

MQ
type: SiteQuality
SIO_000300: 5.963e1

DP
type: SiteQuality
SIO_000300: 1.576352e6

MQRankSum
type: SiteQuality
SIO_000300: 1.49e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.0e-2

GenotypeDepth
all individuals: 47
bin: 6.75e1
variant carriers: 11

GenotypeDepth
all individuals: 27046
bin: 2.25e1
variant carriers: 6

GenotypeDepth
all individuals: 371
bin: 4.75e1
variant carriers: 22

GenotypeDepth
all individuals: 1784
bin: 3.75e1
variant carriers: 24

GenotypeDepth
all individuals: 404
bin: 1.75e1
variant carriers: 1

GenotypeDepth
all individuals: 766
bin: 4.25e1
variant carriers: 16

GenotypeDepth
all individuals: 48
bin: 9.75e1
variant carriers: 41

GenotypeDepth
all individuals: 29
bin: 7.75e1
variant carriers: 11

GenotypeDepth
all individuals: 130
bin: 1.25e1
variant carriers: 1

GenotypeDepth
all individuals: 7562
bin: 3.25e1
variant carriers: 11

GenotypeDepth
all individuals: 60
bin: 6.25e1
variant carriers: 11

GenotypeDepth
all individuals: 119
bin: 5.75e1
variant carriers: 18

GenotypeDepth
all individuals: 12
bin: 8.75e1
variant carriers: 10

GenotypeDepth
all individuals: 182
bin: 5.25e1
variant carriers: 22

GenotypeDepth
all individuals: 21
bin: 7.25e1
variant carriers: 7

GenotypeQuality
all individuals: 6
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 180
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 44958
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1496
bin: 9.75e1
variant carriers: 238

GenotypeQuality
all individuals: 2049
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 133
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7043
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 190
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 107
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 144
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2022
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1056
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 416
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 215
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 477
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 26
allele frequency: 3.900975243810953e-4
allele num: 66650
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.527650473571647e-4
allele num: 6546
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

South Asian
type: Population
allele count: 213
allele frequency: 1.291691934505761e-2
allele num: 16490
num of homozygotes: 4

Other
type: Population
allele count: 3
allele frequency: 3.311258278145695e-3
allele num: 906
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.64e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.36e0

MQRankSum
type: SiteQuality
SIO_000300: 2.6e-1

DP
type: SiteQuality
SIO_000300: 1.584733e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.7e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.62e-2

QD
type: SiteQuality
SIO_000300: 1.274e1

FS
type: SiteQuality
SIO_000300: 1.142e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.82e-1

MQ
type: SiteQuality
SIO_000300: 5.975e1