5-140801121-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140801121
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140801121
    reference: chr 5
allele count: 1
allele frequency: 8.338753523123364e-6
allele num: 119922
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262576
  ensembl protein: ENSP00000458570
  ensembl transcript: ENST00000571252
  gene symbol: PCDHGA4
  hgvsc: ENST00000571252.1:c.2421+63933T>C
  variant of: http://identifiers.org/hgnc/8702
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204956
  ensembl protein: ENSP00000431083
  ensembl transcript: ENST00000517417
  gene symbol: PCDHGA1
  hgvsc: ENST00000517417.1:c.2422-73253T>C
  variant of: http://identifiers.org/hgnc/8696
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000381589
  ensembl transcript: ENST00000398587
  gene symbol: PCDHGA11
  hgvsc: ENST00000398587.2:c.327T>C
  hgvsp: ENST00000398587.2:c.327T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254122
  ensembl protein: ENSP00000381594
  ensembl transcript: ENST00000398594
  gene symbol: PCDHGB7
  hgvsc: ENST00000398594.2:c.2415+1280T>C
  variant of: http://identifiers.org/hgnc/8714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081853
  ensembl protein: ENSP00000378077
  ensembl transcript: ENST00000394576
  gene symbol: PCDHGA2
  hgvsc: ENST00000394576.2:c.2425-73253T>C
  variant of: http://identifiers.org/hgnc/8700
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000428333
  ensembl transcript: ENST00000518882
  gene symbol: PCDHGA11
  hgvsc: ENST00000518882.1:c.327T>C
  hgvsp: ENST00000518882.1:c.327T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254245
  ensembl protein: ENSP00000253812
  ensembl transcript: ENST00000253812
  gene symbol: PCDHGA3
  hgvsc: ENST00000253812.6:c.2425-73253T>C
  variant of: http://identifiers.org/hgnc/8701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253305
  ensembl protein: ENSP00000428603
  ensembl transcript: ENST00000520790
  gene symbol: PCDHGB6
  hgvsc: ENST00000520790.1:c.2418+10934T>C
  variant of: http://identifiers.org/hgnc/8713
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253910
  ensembl protein: ENSP00000429018
  ensembl transcript: ENST00000522605
  gene symbol: PCDHGB2
  hgvsc: ENST00000522605.1:c.2421+58998T>C
  variant of: http://identifiers.org/hgnc/8709
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253731
  ensembl protein: ENSP00000429601
  ensembl transcript: ENST00000517434
  gene symbol: PCDHGA6
  hgvsc: ENST00000517434.1:c.2424+45047T>C
  variant of: http://identifiers.org/hgnc/8704
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253846
  ensembl protein: ENSP00000381611
  ensembl transcript: ENST00000398610
  gene symbol: PCDHGA10
  hgvsc: ENST00000398610.2:c.2436+5943T>C
  variant of: http://identifiers.org/hgnc/8697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253485
  ensembl protein: ENSP00000429834
  ensembl transcript: ENST00000518069
  gene symbol: PCDHGA5
  hgvsc: ENST00000518069.1:c.2421+54803T>C
  variant of: http://identifiers.org/hgnc/8703
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253537
  ensembl protein: ENSP00000430024
  ensembl transcript: ENST00000518325
  gene symbol: PCDHGA7
  hgvsc: ENST00000518325.1:c.2424+36231T>C
  variant of: http://identifiers.org/hgnc/8705
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254221
  ensembl protein: ENSP00000429273
  ensembl transcript: ENST00000523390
  gene symbol: PCDHGB1
  hgvsc: ENST00000523390.1:c.2409+68885T>C
  variant of: http://identifiers.org/hgnc/8708
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261934
  ensembl protein: ENSP00000460274
  ensembl transcript: ENST00000573521
  gene symbol: PCDHGA9
  hgvsc: ENST00000573521.1:c.2424+16178T>C
  variant of: http://identifiers.org/hgnc/8707
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253767
  ensembl protein: ENSP00000381605
  ensembl transcript: ENST00000398604
  gene symbol: PCDHGA8
  hgvsc: ENST00000398604.2:c.2424+26317T>C
  variant of: http://identifiers.org/hgnc/8706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253953
  ensembl protein: ENSP00000428288
  ensembl transcript: ENST00000519479
  gene symbol: PCDHGB4
  hgvsc: ENST00000519479.1:c.2397+31273T>C
  variant of: http://identifiers.org/hgnc/8711
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262209
  ensembl protein: ENSP00000461862
  ensembl transcript: ENST00000576222
  gene symbol: PCDHGB3
  hgvsc: ENST00000576222.1:c.2415+48745T>C
  variant of: http://identifiers.org/hgnc/8710
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.90to99.95
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu109Leu
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: East Asian
population: South Asian
reference allele: T
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum

5-140801124-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140801124
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140801124
    reference: chr 5
allele count: 1
allele frequency: 8.344877079960612e-6
allele num: 119834
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253305
  ensembl protein: ENSP00000428603
  ensembl transcript: ENST00000520790
  gene symbol: PCDHGB6
  hgvsc: ENST00000520790.1:c.2418+10937C>T
  variant of: http://identifiers.org/hgnc/8713
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253767
  ensembl protein: ENSP00000381605
  ensembl transcript: ENST00000398604
  gene symbol: PCDHGA8
  hgvsc: ENST00000398604.2:c.2424+26320C>T
  variant of: http://identifiers.org/hgnc/8706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254221
  ensembl protein: ENSP00000429273
  ensembl transcript: ENST00000523390
  gene symbol: PCDHGB1
  hgvsc: ENST00000523390.1:c.2409+68888C>T
  variant of: http://identifiers.org/hgnc/8708
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253537
  ensembl protein: ENSP00000430024
  ensembl transcript: ENST00000518325
  gene symbol: PCDHGA7
  hgvsc: ENST00000518325.1:c.2424+36234C>T
  variant of: http://identifiers.org/hgnc/8705
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204956
  ensembl protein: ENSP00000431083
  ensembl transcript: ENST00000517417
  gene symbol: PCDHGA1
  hgvsc: ENST00000517417.1:c.2422-73250C>T
  variant of: http://identifiers.org/hgnc/8696
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081853
  ensembl protein: ENSP00000378077
  ensembl transcript: ENST00000394576
  gene symbol: PCDHGA2
  hgvsc: ENST00000394576.2:c.2425-73250C>T
  variant of: http://identifiers.org/hgnc/8700
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000428333
  ensembl transcript: ENST00000518882
  gene symbol: PCDHGA11
  hgvsc: ENST00000518882.1:c.330C>T
  hgvsp: ENST00000518882.1:c.330C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253953
  ensembl protein: ENSP00000428288
  ensembl transcript: ENST00000519479
  gene symbol: PCDHGB4
  hgvsc: ENST00000519479.1:c.2397+31276C>T
  variant of: http://identifiers.org/hgnc/8711
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253485
  ensembl protein: ENSP00000429834
  ensembl transcript: ENST00000518069
  gene symbol: PCDHGA5
  hgvsc: ENST00000518069.1:c.2421+54806C>T
  variant of: http://identifiers.org/hgnc/8703
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253846
  ensembl protein: ENSP00000381611
  ensembl transcript: ENST00000398610
  gene symbol: PCDHGA10
  hgvsc: ENST00000398610.2:c.2436+5946C>T
  variant of: http://identifiers.org/hgnc/8697
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000381589
  ensembl transcript: ENST00000398587
  gene symbol: PCDHGA11
  hgvsc: ENST00000398587.2:c.330C>T
  hgvsp: ENST00000398587.2:c.330C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253731
  ensembl protein: ENSP00000429601
  ensembl transcript: ENST00000517434
  gene symbol: PCDHGA6
  hgvsc: ENST00000517434.1:c.2424+45050C>T
  variant of: http://identifiers.org/hgnc/8704
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254245
  ensembl protein: ENSP00000253812
  ensembl transcript: ENST00000253812
  gene symbol: PCDHGA3
  hgvsc: ENST00000253812.6:c.2425-73250C>T
  variant of: http://identifiers.org/hgnc/8701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261934
  ensembl protein: ENSP00000460274
  ensembl transcript: ENST00000573521
  gene symbol: PCDHGA9
  hgvsc: ENST00000573521.1:c.2424+16181C>T
  variant of: http://identifiers.org/hgnc/8707
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262209
  ensembl protein: ENSP00000461862
  ensembl transcript: ENST00000576222
  gene symbol: PCDHGB3
  hgvsc: ENST00000576222.1:c.2415+48748C>T
  variant of: http://identifiers.org/hgnc/8710
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262576
  ensembl protein: ENSP00000458570
  ensembl transcript: ENST00000571252
  gene symbol: PCDHGA4
  hgvsc: ENST00000571252.1:c.2421+63936C>T
  variant of: http://identifiers.org/hgnc/8702
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254122
  ensembl protein: ENSP00000381594
  ensembl transcript: ENST00000398594
  gene symbol: PCDHGB7
  hgvsc: ENST00000398594.2:c.2415+1283C>T
  variant of: http://identifiers.org/hgnc/8714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253910
  ensembl protein: ENSP00000429018
  ensembl transcript: ENST00000522605
  gene symbol: PCDHGB2
  hgvsc: ENST00000522605.1:c.2421+59001C>T
  variant of: http://identifiers.org/hgnc/8709
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17700
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1091
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu110Leu
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: African
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: MQ

5-140801146-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140801146
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140801146
    reference: chr 5
allele count: 1
allele frequency: 8.370722560771445e-6
allele num: 119464
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081853
  ensembl protein: ENSP00000378077
  ensembl transcript: ENST00000394576
  gene symbol: PCDHGA2
  hgvsc: ENST00000394576.2:c.2425-73228T>A
  variant of: http://identifiers.org/hgnc/8700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253846
  ensembl protein: ENSP00000381611
  ensembl transcript: ENST00000398610
  gene symbol: PCDHGA10
  hgvsc: ENST00000398610.2:c.2436+5968T>A
  variant of: http://identifiers.org/hgnc/8697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254122
  ensembl protein: ENSP00000381594
  ensembl transcript: ENST00000398594
  gene symbol: PCDHGB7
  hgvsc: ENST00000398594.2:c.2415+1305T>A
  variant of: http://identifiers.org/hgnc/8714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000428333
  ensembl transcript: ENST00000518882
  gene symbol: PCDHGA11
  hgvsc: ENST00000518882.1:c.352T>A
  hgvsp: ENSP00000428333.1:p.Tyr118Asn
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261934
  ensembl protein: ENSP00000460274
  ensembl transcript: ENST00000573521
  gene symbol: PCDHGA9
  hgvsc: ENST00000573521.1:c.2424+16203T>A
  variant of: http://identifiers.org/hgnc/8707
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254245
  ensembl protein: ENSP00000253812
  ensembl transcript: ENST00000253812
  gene symbol: PCDHGA3
  hgvsc: ENST00000253812.6:c.2425-73228T>A
  variant of: http://identifiers.org/hgnc/8701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204956
  ensembl protein: ENSP00000431083
  ensembl transcript: ENST00000517417
  gene symbol: PCDHGA1
  hgvsc: ENST00000517417.1:c.2422-73228T>A
  variant of: http://identifiers.org/hgnc/8696
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254221
  ensembl protein: ENSP00000429273
  ensembl transcript: ENST00000523390
  gene symbol: PCDHGB1
  hgvsc: ENST00000523390.1:c.2409+68910T>A
  variant of: http://identifiers.org/hgnc/8708
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253910
  ensembl protein: ENSP00000429018
  ensembl transcript: ENST00000522605
  gene symbol: PCDHGB2
  hgvsc: ENST00000522605.1:c.2421+59023T>A
  variant of: http://identifiers.org/hgnc/8709
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262576
  ensembl protein: ENSP00000458570
  ensembl transcript: ENST00000571252
  gene symbol: PCDHGA4
  hgvsc: ENST00000571252.1:c.2421+63958T>A
  variant of: http://identifiers.org/hgnc/8702
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262209
  ensembl protein: ENSP00000461862
  ensembl transcript: ENST00000576222
  gene symbol: PCDHGB3
  hgvsc: ENST00000576222.1:c.2415+48770T>A
  variant of: http://identifiers.org/hgnc/8710
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253953
  ensembl protein: ENSP00000428288
  ensembl transcript: ENST00000519479
  gene symbol: PCDHGB4
  hgvsc: ENST00000519479.1:c.2397+31298T>A
  variant of: http://identifiers.org/hgnc/8711
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253767
  ensembl protein: ENSP00000381605
  ensembl transcript: ENST00000398604
  gene symbol: PCDHGA8
  hgvsc: ENST00000398604.2:c.2424+26342T>A
  variant of: http://identifiers.org/hgnc/8706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253485
  ensembl protein: ENSP00000429834
  ensembl transcript: ENST00000518069
  gene symbol: PCDHGA5
  hgvsc: ENST00000518069.1:c.2421+54828T>A
  variant of: http://identifiers.org/hgnc/8703
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000381589
  ensembl transcript: ENST00000398587
  gene symbol: PCDHGA11
  hgvsc: ENST00000398587.2:c.352T>A
  hgvsp: ENSP00000381589.2:p.Tyr118Asn
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253305
  ensembl protein: ENSP00000428603
  ensembl transcript: ENST00000520790
  gene symbol: PCDHGB6
  hgvsc: ENST00000520790.1:c.2418+10959T>A
  variant of: http://identifiers.org/hgnc/8713
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253537
  ensembl protein: ENSP00000430024
  ensembl transcript: ENST00000518325
  gene symbol: PCDHGA7
  hgvsc: ENST00000518325.1:c.2424+36256T>A
  variant of: http://identifiers.org/hgnc/8705
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253731
  ensembl protein: ENSP00000429601
  ensembl transcript: ENST00000517434
  gene symbol: PCDHGA6
  hgvsc: ENST00000517434.1:c.2424+45072T>A
  variant of: http://identifiers.org/hgnc/8704
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Tyr118Asn
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum

5-140801147-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140801147
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140801147
    reference: chr 5
allele count: 6
allele frequency: 5.023442732752847e-5
allele num: 119440
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000381589
  ensembl transcript: ENST00000398587
  gene symbol: PCDHGA11
  hgvsc: ENST00000398587.2:c.353A>G
  hgvsp: ENSP00000381589.2:p.Tyr118Cys
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253953
  ensembl protein: ENSP00000428288
  ensembl transcript: ENST00000519479
  gene symbol: PCDHGB4
  hgvsc: ENST00000519479.1:c.2397+31299A>G
  variant of: http://identifiers.org/hgnc/8711
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081853
  ensembl protein: ENSP00000378077
  ensembl transcript: ENST00000394576
  gene symbol: PCDHGA2
  hgvsc: ENST00000394576.2:c.2425-73227A>G
  variant of: http://identifiers.org/hgnc/8700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254245
  ensembl protein: ENSP00000253812
  ensembl transcript: ENST00000253812
  gene symbol: PCDHGA3
  hgvsc: ENST00000253812.6:c.2425-73227A>G
  variant of: http://identifiers.org/hgnc/8701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254221
  ensembl protein: ENSP00000429273
  ensembl transcript: ENST00000523390
  gene symbol: PCDHGB1
  hgvsc: ENST00000523390.1:c.2409+68911A>G
  variant of: http://identifiers.org/hgnc/8708
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253485
  ensembl protein: ENSP00000429834
  ensembl transcript: ENST00000518069
  gene symbol: PCDHGA5
  hgvsc: ENST00000518069.1:c.2421+54829A>G
  variant of: http://identifiers.org/hgnc/8703
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262576
  ensembl protein: ENSP00000458570
  ensembl transcript: ENST00000571252
  gene symbol: PCDHGA4
  hgvsc: ENST00000571252.1:c.2421+63959A>G
  variant of: http://identifiers.org/hgnc/8702
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254122
  ensembl protein: ENSP00000381594
  ensembl transcript: ENST00000398594
  gene symbol: PCDHGB7
  hgvsc: ENST00000398594.2:c.2415+1306A>G
  variant of: http://identifiers.org/hgnc/8714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253846
  ensembl protein: ENSP00000381611
  ensembl transcript: ENST00000398610
  gene symbol: PCDHGA10
  hgvsc: ENST00000398610.2:c.2436+5969A>G
  variant of: http://identifiers.org/hgnc/8697
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000428333
  ensembl transcript: ENST00000518882
  gene symbol: PCDHGA11
  hgvsc: ENST00000518882.1:c.353A>G
  hgvsp: ENSP00000428333.1:p.Tyr118Cys
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204956
  ensembl protein: ENSP00000431083
  ensembl transcript: ENST00000517417
  gene symbol: PCDHGA1
  hgvsc: ENST00000517417.1:c.2422-73227A>G
  variant of: http://identifiers.org/hgnc/8696
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253767
  ensembl protein: ENSP00000381605
  ensembl transcript: ENST00000398604
  gene symbol: PCDHGA8
  hgvsc: ENST00000398604.2:c.2424+26343A>G
  variant of: http://identifiers.org/hgnc/8706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253731
  ensembl protein: ENSP00000429601
  ensembl transcript: ENST00000517434
  gene symbol: PCDHGA6
  hgvsc: ENST00000517434.1:c.2424+45073A>G
  variant of: http://identifiers.org/hgnc/8704
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262209
  ensembl protein: ENSP00000461862
  ensembl transcript: ENST00000576222
  gene symbol: PCDHGB3
  hgvsc: ENST00000576222.1:c.2415+48771A>G
  variant of: http://identifiers.org/hgnc/8710
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253305
  ensembl protein: ENSP00000428603
  ensembl transcript: ENST00000520790
  gene symbol: PCDHGB6
  hgvsc: ENST00000520790.1:c.2418+10960A>G
  variant of: http://identifiers.org/hgnc/8713
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253910
  ensembl protein: ENSP00000429018
  ensembl transcript: ENST00000522605
  gene symbol: PCDHGB2
  hgvsc: ENST00000522605.1:c.2421+59024A>G
  variant of: http://identifiers.org/hgnc/8709
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253537
  ensembl protein: ENSP00000430024
  ensembl transcript: ENST00000518325
  gene symbol: PCDHGA7
  hgvsc: ENST00000518325.1:c.2424+36257A>G
  variant of: http://identifiers.org/hgnc/8705
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261934
  ensembl protein: ENSP00000460274
  ensembl transcript: ENST00000573521
  gene symbol: PCDHGA9
  hgvsc: ENST00000573521.1:c.2424+16204A>G
  variant of: http://identifiers.org/hgnc/8707
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31100
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3795
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Tyr118Cys
num of homozygotes: 1
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: African
reference allele: A
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum

5-140801150-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140801150
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140801150
    reference: chr 5
allele count: 1
allele frequency: 8.377173876620983e-6
allele num: 119372
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253305
  ensembl protein: ENSP00000428603
  ensembl transcript: ENST00000520790
  gene symbol: PCDHGB6
  hgvsc: ENST00000520790.1:c.2418+10963G>A
  variant of: http://identifiers.org/hgnc/8713
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204956
  ensembl protein: ENSP00000431083
  ensembl transcript: ENST00000517417
  gene symbol: PCDHGA1
  hgvsc: ENST00000517417.1:c.2422-73224G>A
  variant of: http://identifiers.org/hgnc/8696
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261934
  ensembl protein: ENSP00000460274
  ensembl transcript: ENST00000573521
  gene symbol: PCDHGA9
  hgvsc: ENST00000573521.1:c.2424+16207G>A
  variant of: http://identifiers.org/hgnc/8707
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253731
  ensembl protein: ENSP00000429601
  ensembl transcript: ENST00000517434
  gene symbol: PCDHGA6
  hgvsc: ENST00000517434.1:c.2424+45076G>A
  variant of: http://identifiers.org/hgnc/8704
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000381589
  ensembl transcript: ENST00000398587
  gene symbol: PCDHGA11
  hgvsc: ENST00000398587.2:c.356G>A
  hgvsp: ENSP00000381589.2:p.Gly119Glu
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253767
  ensembl protein: ENSP00000381605
  ensembl transcript: ENST00000398604
  gene symbol: PCDHGA8
  hgvsc: ENST00000398604.2:c.2424+26346G>A
  variant of: http://identifiers.org/hgnc/8706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253537
  ensembl protein: ENSP00000430024
  ensembl transcript: ENST00000518325
  gene symbol: PCDHGA7
  hgvsc: ENST00000518325.1:c.2424+36260G>A
  variant of: http://identifiers.org/hgnc/8705
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000428333
  ensembl transcript: ENST00000518882
  gene symbol: PCDHGA11
  hgvsc: ENST00000518882.1:c.356G>A
  hgvsp: ENSP00000428333.1:p.Gly119Glu
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254221
  ensembl protein: ENSP00000429273
  ensembl transcript: ENST00000523390
  gene symbol: PCDHGB1
  hgvsc: ENST00000523390.1:c.2409+68914G>A
  variant of: http://identifiers.org/hgnc/8708
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253485
  ensembl protein: ENSP00000429834
  ensembl transcript: ENST00000518069
  gene symbol: PCDHGA5
  hgvsc: ENST00000518069.1:c.2421+54832G>A
  variant of: http://identifiers.org/hgnc/8703
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253953
  ensembl protein: ENSP00000428288
  ensembl transcript: ENST00000519479
  gene symbol: PCDHGB4
  hgvsc: ENST00000519479.1:c.2397+31302G>A
  variant of: http://identifiers.org/hgnc/8711
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254122
  ensembl protein: ENSP00000381594
  ensembl transcript: ENST00000398594
  gene symbol: PCDHGB7
  hgvsc: ENST00000398594.2:c.2415+1309G>A
  variant of: http://identifiers.org/hgnc/8714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253846
  ensembl protein: ENSP00000381611
  ensembl transcript: ENST00000398610
  gene symbol: PCDHGA10
  hgvsc: ENST00000398610.2:c.2436+5972G>A
  variant of: http://identifiers.org/hgnc/8697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262209
  ensembl protein: ENSP00000461862
  ensembl transcript: ENST00000576222
  gene symbol: PCDHGB3
  hgvsc: ENST00000576222.1:c.2415+48774G>A
  variant of: http://identifiers.org/hgnc/8710
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081853
  ensembl protein: ENSP00000378077
  ensembl transcript: ENST00000394576
  gene symbol: PCDHGA2
  hgvsc: ENST00000394576.2:c.2425-73224G>A
  variant of: http://identifiers.org/hgnc/8700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262576
  ensembl protein: ENSP00000458570
  ensembl transcript: ENST00000571252
  gene symbol: PCDHGA4
  hgvsc: ENST00000571252.1:c.2421+63962G>A
  variant of: http://identifiers.org/hgnc/8702
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253910
  ensembl protein: ENSP00000429018
  ensembl transcript: ENST00000522605
  gene symbol: PCDHGB2
  hgvsc: ENST00000522605.1:c.2421+59027G>A
  variant of: http://identifiers.org/hgnc/8709
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254245
  ensembl protein: ENSP00000253812
  ensembl transcript: ENST00000253812
  gene symbol: PCDHGA3
  hgvsc: ENST00000253812.6:c.2425-73224G>A
  variant of: http://identifiers.org/hgnc/8701
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3534
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly119Glu
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: Other
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: DP

5-140801153-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140801153
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140801153
    reference: chr 5
allele count: 2
allele frequency: 1.675743611227482e-5
allele num: 119350
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262576
  ensembl protein: ENSP00000458570
  ensembl transcript: ENST00000571252
  gene symbol: PCDHGA4
  hgvsc: ENST00000571252.1:c.2421+63965T>A
  variant of: http://identifiers.org/hgnc/8702
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262209
  ensembl protein: ENSP00000461862
  ensembl transcript: ENST00000576222
  gene symbol: PCDHGB3
  hgvsc: ENST00000576222.1:c.2415+48777T>A
  variant of: http://identifiers.org/hgnc/8710
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253537
  ensembl protein: ENSP00000430024
  ensembl transcript: ENST00000518325
  gene symbol: PCDHGA7
  hgvsc: ENST00000518325.1:c.2424+36263T>A
  variant of: http://identifiers.org/hgnc/8705
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000428333
  ensembl transcript: ENST00000518882
  gene symbol: PCDHGA11
  hgvsc: ENST00000518882.1:c.359T>A
  hgvsp: ENSP00000428333.1:p.Val120Glu
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253485
  ensembl protein: ENSP00000429834
  ensembl transcript: ENST00000518069
  gene symbol: PCDHGA5
  hgvsc: ENST00000518069.1:c.2421+54835T>A
  variant of: http://identifiers.org/hgnc/8703
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253846
  ensembl protein: ENSP00000381611
  ensembl transcript: ENST00000398610
  gene symbol: PCDHGA10
  hgvsc: ENST00000398610.2:c.2436+5975T>A
  variant of: http://identifiers.org/hgnc/8697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253953
  ensembl protein: ENSP00000428288
  ensembl transcript: ENST00000519479
  gene symbol: PCDHGB4
  hgvsc: ENST00000519479.1:c.2397+31305T>A
  variant of: http://identifiers.org/hgnc/8711
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253731
  ensembl protein: ENSP00000429601
  ensembl transcript: ENST00000517434
  gene symbol: PCDHGA6
  hgvsc: ENST00000517434.1:c.2424+45079T>A
  variant of: http://identifiers.org/hgnc/8704
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253767
  ensembl protein: ENSP00000381605
  ensembl transcript: ENST00000398604
  gene symbol: PCDHGA8
  hgvsc: ENST00000398604.2:c.2424+26349T>A
  variant of: http://identifiers.org/hgnc/8706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081853
  ensembl protein: ENSP00000378077
  ensembl transcript: ENST00000394576
  gene symbol: PCDHGA2
  hgvsc: ENST00000394576.2:c.2425-73221T>A
  variant of: http://identifiers.org/hgnc/8700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254221
  ensembl protein: ENSP00000429273
  ensembl transcript: ENST00000523390
  gene symbol: PCDHGB1
  hgvsc: ENST00000523390.1:c.2409+68917T>A
  variant of: http://identifiers.org/hgnc/8708
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204956
  ensembl protein: ENSP00000431083
  ensembl transcript: ENST00000517417
  gene symbol: PCDHGA1
  hgvsc: ENST00000517417.1:c.2422-73221T>A
  variant of: http://identifiers.org/hgnc/8696
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000381589
  ensembl transcript: ENST00000398587
  gene symbol: PCDHGA11
  hgvsc: ENST00000398587.2:c.359T>A
  hgvsp: ENSP00000381589.2:p.Val120Glu
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254245
  ensembl protein: ENSP00000253812
  ensembl transcript: ENST00000253812
  gene symbol: PCDHGA3
  hgvsc: ENST00000253812.6:c.2425-73221T>A
  variant of: http://identifiers.org/hgnc/8701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261934
  ensembl protein: ENSP00000460274
  ensembl transcript: ENST00000573521
  gene symbol: PCDHGA9
  hgvsc: ENST00000573521.1:c.2424+16210T>A
  variant of: http://identifiers.org/hgnc/8707
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253910
  ensembl protein: ENSP00000429018
  ensembl transcript: ENST00000522605
  gene symbol: PCDHGB2
  hgvsc: ENST00000522605.1:c.2421+59030T>A
  variant of: http://identifiers.org/hgnc/8709
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253305
  ensembl protein: ENSP00000428603
  ensembl transcript: ENST00000520790
  gene symbol: PCDHGB6
  hgvsc: ENST00000520790.1:c.2418+10966T>A
  variant of: http://identifiers.org/hgnc/8713
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254122
  ensembl protein: ENSP00000381594
  ensembl transcript: ENST00000398594
  gene symbol: PCDHGB7
  hgvsc: ENST00000398594.2:c.2415+1312T>A
  variant of: http://identifiers.org/hgnc/8714
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1049
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3768
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3027
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val120Glu
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
reference allele: T
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: QD

5-140801154-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140801154
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140801154
    reference: chr 5
allele count: 1
allele frequency: 8.381667616588997e-6
allele num: 119308
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253910
  ensembl protein: ENSP00000429018
  ensembl transcript: ENST00000522605
  gene symbol: PCDHGB2
  hgvsc: ENST00000522605.1:c.2421+59031G>T
  variant of: http://identifiers.org/hgnc/8709
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253537
  ensembl protein: ENSP00000430024
  ensembl transcript: ENST00000518325
  gene symbol: PCDHGA7
  hgvsc: ENST00000518325.1:c.2424+36264G>T
  variant of: http://identifiers.org/hgnc/8705
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000428333
  ensembl transcript: ENST00000518882
  gene symbol: PCDHGA11
  hgvsc: ENST00000518882.1:c.360G>T
  hgvsp: ENST00000518882.1:c.360G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000381589
  ensembl transcript: ENST00000398587
  gene symbol: PCDHGA11
  hgvsc: ENST00000398587.2:c.360G>T
  hgvsp: ENST00000398587.2:c.360G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253846
  ensembl protein: ENSP00000381611
  ensembl transcript: ENST00000398610
  gene symbol: PCDHGA10
  hgvsc: ENST00000398610.2:c.2436+5976G>T
  variant of: http://identifiers.org/hgnc/8697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204956
  ensembl protein: ENSP00000431083
  ensembl transcript: ENST00000517417
  gene symbol: PCDHGA1
  hgvsc: ENST00000517417.1:c.2422-73220G>T
  variant of: http://identifiers.org/hgnc/8696
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262209
  ensembl protein: ENSP00000461862
  ensembl transcript: ENST00000576222
  gene symbol: PCDHGB3
  hgvsc: ENST00000576222.1:c.2415+48778G>T
  variant of: http://identifiers.org/hgnc/8710
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254221
  ensembl protein: ENSP00000429273
  ensembl transcript: ENST00000523390
  gene symbol: PCDHGB1
  hgvsc: ENST00000523390.1:c.2409+68918G>T
  variant of: http://identifiers.org/hgnc/8708
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253731
  ensembl protein: ENSP00000429601
  ensembl transcript: ENST00000517434
  gene symbol: PCDHGA6
  hgvsc: ENST00000517434.1:c.2424+45080G>T
  variant of: http://identifiers.org/hgnc/8704
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254245
  ensembl protein: ENSP00000253812
  ensembl transcript: ENST00000253812
  gene symbol: PCDHGA3
  hgvsc: ENST00000253812.6:c.2425-73220G>T
  variant of: http://identifiers.org/hgnc/8701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253767
  ensembl protein: ENSP00000381605
  ensembl transcript: ENST00000398604
  gene symbol: PCDHGA8
  hgvsc: ENST00000398604.2:c.2424+26350G>T
  variant of: http://identifiers.org/hgnc/8706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262576
  ensembl protein: ENSP00000458570
  ensembl transcript: ENST00000571252
  gene symbol: PCDHGA4
  hgvsc: ENST00000571252.1:c.2421+63966G>T
  variant of: http://identifiers.org/hgnc/8702
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253305
  ensembl protein: ENSP00000428603
  ensembl transcript: ENST00000520790
  gene symbol: PCDHGB6
  hgvsc: ENST00000520790.1:c.2418+10967G>T
  variant of: http://identifiers.org/hgnc/8713
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254122
  ensembl protein: ENSP00000381594
  ensembl transcript: ENST00000398594
  gene symbol: PCDHGB7
  hgvsc: ENST00000398594.2:c.2415+1313G>T
  variant of: http://identifiers.org/hgnc/8714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261934
  ensembl protein: ENSP00000460274
  ensembl transcript: ENST00000573521
  gene symbol: PCDHGA9
  hgvsc: ENST00000573521.1:c.2424+16211G>T
  variant of: http://identifiers.org/hgnc/8707
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081853
  ensembl protein: ENSP00000378077
  ensembl transcript: ENST00000394576
  gene symbol: PCDHGA2
  hgvsc: ENST00000394576.2:c.2425-73220G>T
  variant of: http://identifiers.org/hgnc/8700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253953
  ensembl protein: ENSP00000428288
  ensembl transcript: ENST00000519479
  gene symbol: PCDHGB4
  hgvsc: ENST00000519479.1:c.2397+31306G>T
  variant of: http://identifiers.org/hgnc/8711
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253485
  ensembl protein: ENSP00000429834
  ensembl transcript: ENST00000518069
  gene symbol: PCDHGA5
  hgvsc: ENST00000518069.1:c.2421+54836G>T
  variant of: http://identifiers.org/hgnc/8703
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3629
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3074
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val120Val
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum

5-140801160-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140801160
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140801160
    reference: chr 5
allele count: 3
allele frequency: 2.517623363544814e-5
allele num: 119160
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253305
  ensembl protein: ENSP00000428603
  ensembl transcript: ENST00000520790
  gene symbol: PCDHGB6
  hgvsc: ENST00000520790.1:c.2418+10973G>A
  variant of: http://identifiers.org/hgnc/8713
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254245
  ensembl protein: ENSP00000253812
  ensembl transcript: ENST00000253812
  gene symbol: PCDHGA3
  hgvsc: ENST00000253812.6:c.2425-73214G>A
  variant of: http://identifiers.org/hgnc/8701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253731
  ensembl protein: ENSP00000429601
  ensembl transcript: ENST00000517434
  gene symbol: PCDHGA6
  hgvsc: ENST00000517434.1:c.2424+45086G>A
  variant of: http://identifiers.org/hgnc/8704
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254221
  ensembl protein: ENSP00000429273
  ensembl transcript: ENST00000523390
  gene symbol: PCDHGB1
  hgvsc: ENST00000523390.1:c.2409+68924G>A
  variant of: http://identifiers.org/hgnc/8708
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253846
  ensembl protein: ENSP00000381611
  ensembl transcript: ENST00000398610
  gene symbol: PCDHGA10
  hgvsc: ENST00000398610.2:c.2436+5982G>A
  variant of: http://identifiers.org/hgnc/8697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262209
  ensembl protein: ENSP00000461862
  ensembl transcript: ENST00000576222
  gene symbol: PCDHGB3
  hgvsc: ENST00000576222.1:c.2415+48784G>A
  variant of: http://identifiers.org/hgnc/8710
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253537
  ensembl protein: ENSP00000430024
  ensembl transcript: ENST00000518325
  gene symbol: PCDHGA7
  hgvsc: ENST00000518325.1:c.2424+36270G>A
  variant of: http://identifiers.org/hgnc/8705
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253953
  ensembl protein: ENSP00000428288
  ensembl transcript: ENST00000519479
  gene symbol: PCDHGB4
  hgvsc: ENST00000519479.1:c.2397+31312G>A
  variant of: http://identifiers.org/hgnc/8711
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253767
  ensembl protein: ENSP00000381605
  ensembl transcript: ENST00000398604
  gene symbol: PCDHGA8
  hgvsc: ENST00000398604.2:c.2424+26356G>A
  variant of: http://identifiers.org/hgnc/8706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262576
  ensembl protein: ENSP00000458570
  ensembl transcript: ENST00000571252
  gene symbol: PCDHGA4
  hgvsc: ENST00000571252.1:c.2421+63972G>A
  variant of: http://identifiers.org/hgnc/8702
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000428333
  ensembl transcript: ENST00000518882
  gene symbol: PCDHGA11
  hgvsc: ENST00000518882.1:c.366G>A
  hgvsp: ENST00000518882.1:c.366G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204956
  ensembl protein: ENSP00000431083
  ensembl transcript: ENST00000517417
  gene symbol: PCDHGA1
  hgvsc: ENST00000517417.1:c.2422-73214G>A
  variant of: http://identifiers.org/hgnc/8696
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253485
  ensembl protein: ENSP00000429834
  ensembl transcript: ENST00000518069
  gene symbol: PCDHGA5
  hgvsc: ENST00000518069.1:c.2421+54842G>A
  variant of: http://identifiers.org/hgnc/8703
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254122
  ensembl protein: ENSP00000381594
  ensembl transcript: ENST00000398594
  gene symbol: PCDHGB7
  hgvsc: ENST00000398594.2:c.2415+1319G>A
  variant of: http://identifiers.org/hgnc/8714
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000381589
  ensembl transcript: ENST00000398587
  gene symbol: PCDHGA11
  hgvsc: ENST00000398587.2:c.366G>A
  hgvsp: ENST00000398587.2:c.366G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253910
  ensembl protein: ENSP00000429018
  ensembl transcript: ENST00000522605
  gene symbol: PCDHGB2
  hgvsc: ENST00000522605.1:c.2421+59037G>A
  variant of: http://identifiers.org/hgnc/8709
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261934
  ensembl protein: ENSP00000460274
  ensembl transcript: ENST00000573521
  gene symbol: PCDHGA9
  hgvsc: ENST00000573521.1:c.2424+16217G>A
  variant of: http://identifiers.org/hgnc/8707
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081853
  ensembl protein: ENSP00000378077
  ensembl transcript: ENST00000394576
  gene symbol: PCDHGA2
  hgvsc: ENST00000394576.2:c.2425-73214G>A
  variant of: http://identifiers.org/hgnc/8700
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3468
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15687
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4819
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val122Val
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff

5-140801178-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140801178
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140801178
    reference: chr 5
allele count: 2
allele frequency: 1.680728763992067e-5
allele num: 118996
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253846
  ensembl protein: ENSP00000381611
  ensembl transcript: ENST00000398610
  gene symbol: PCDHGA10
  hgvsc: ENST00000398610.2:c.2436+6000T>C
  variant of: http://identifiers.org/hgnc/8697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253305
  ensembl protein: ENSP00000428603
  ensembl transcript: ENST00000520790
  gene symbol: PCDHGB6
  hgvsc: ENST00000520790.1:c.2418+10991T>C
  variant of: http://identifiers.org/hgnc/8713
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000381589
  ensembl transcript: ENST00000398587
  gene symbol: PCDHGA11
  hgvsc: ENST00000398587.2:c.384T>C
  hgvsp: ENST00000398587.2:c.384T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261934
  ensembl protein: ENSP00000460274
  ensembl transcript: ENST00000573521
  gene symbol: PCDHGA9
  hgvsc: ENST00000573521.1:c.2424+16235T>C
  variant of: http://identifiers.org/hgnc/8707
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253910
  ensembl protein: ENSP00000429018
  ensembl transcript: ENST00000522605
  gene symbol: PCDHGB2
  hgvsc: ENST00000522605.1:c.2421+59055T>C
  variant of: http://identifiers.org/hgnc/8709
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254221
  ensembl protein: ENSP00000429273
  ensembl transcript: ENST00000523390
  gene symbol: PCDHGB1
  hgvsc: ENST00000523390.1:c.2409+68942T>C
  variant of: http://identifiers.org/hgnc/8708
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253953
  ensembl protein: ENSP00000428288
  ensembl transcript: ENST00000519479
  gene symbol: PCDHGB4
  hgvsc: ENST00000519479.1:c.2397+31330T>C
  variant of: http://identifiers.org/hgnc/8711
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000428333
  ensembl transcript: ENST00000518882
  gene symbol: PCDHGA11
  hgvsc: ENST00000518882.1:c.384T>C
  hgvsp: ENST00000518882.1:c.384T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262209
  ensembl protein: ENSP00000461862
  ensembl transcript: ENST00000576222
  gene symbol: PCDHGB3
  hgvsc: ENST00000576222.1:c.2415+48802T>C
  variant of: http://identifiers.org/hgnc/8710
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253537
  ensembl protein: ENSP00000430024
  ensembl transcript: ENST00000518325
  gene symbol: PCDHGA7
  hgvsc: ENST00000518325.1:c.2424+36288T>C
  variant of: http://identifiers.org/hgnc/8705
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204956
  ensembl protein: ENSP00000431083
  ensembl transcript: ENST00000517417
  gene symbol: PCDHGA1
  hgvsc: ENST00000517417.1:c.2422-73196T>C
  variant of: http://identifiers.org/hgnc/8696
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253731
  ensembl protein: ENSP00000429601
  ensembl transcript: ENST00000517434
  gene symbol: PCDHGA6
  hgvsc: ENST00000517434.1:c.2424+45104T>C
  variant of: http://identifiers.org/hgnc/8704
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254245
  ensembl protein: ENSP00000253812
  ensembl transcript: ENST00000253812
  gene symbol: PCDHGA3
  hgvsc: ENST00000253812.6:c.2425-73196T>C
  variant of: http://identifiers.org/hgnc/8701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253485
  ensembl protein: ENSP00000429834
  ensembl transcript: ENST00000518069
  gene symbol: PCDHGA5
  hgvsc: ENST00000518069.1:c.2421+54860T>C
  variant of: http://identifiers.org/hgnc/8703
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262576
  ensembl protein: ENSP00000458570
  ensembl transcript: ENST00000571252
  gene symbol: PCDHGA4
  hgvsc: ENST00000571252.1:c.2421+63990T>C
  variant of: http://identifiers.org/hgnc/8702
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253767
  ensembl protein: ENSP00000381605
  ensembl transcript: ENST00000398604
  gene symbol: PCDHGA8
  hgvsc: ENST00000398604.2:c.2424+26374T>C
  variant of: http://identifiers.org/hgnc/8706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081853
  ensembl protein: ENSP00000378077
  ensembl transcript: ENST00000394576
  gene symbol: PCDHGA2
  hgvsc: ENST00000394576.2:c.2425-73196T>C
  variant of: http://identifiers.org/hgnc/8700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254122
  ensembl protein: ENSP00000381594
  ensembl transcript: ENST00000398594
  gene symbol: PCDHGB7
  hgvsc: ENST00000398594.2:c.2415+1337T>C
  variant of: http://identifiers.org/hgnc/8714
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29806
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asn128Asn
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: QD

5-140801181-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140801181
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140801181
    reference: chr 5
allele count: 2
allele frequency: 1.680700515975058e-5
allele num: 118998
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204956
  ensembl protein: ENSP00000431083
  ensembl transcript: ENST00000517417
  gene symbol: PCDHGA1
  hgvsc: ENST00000517417.1:c.2422-73193T>C
  variant of: http://identifiers.org/hgnc/8696
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261934
  ensembl protein: ENSP00000460274
  ensembl transcript: ENST00000573521
  gene symbol: PCDHGA9
  hgvsc: ENST00000573521.1:c.2424+16238T>C
  variant of: http://identifiers.org/hgnc/8707
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253910
  ensembl protein: ENSP00000429018
  ensembl transcript: ENST00000522605
  gene symbol: PCDHGB2
  hgvsc: ENST00000522605.1:c.2421+59058T>C
  variant of: http://identifiers.org/hgnc/8709
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081853
  ensembl protein: ENSP00000378077
  ensembl transcript: ENST00000394576
  gene symbol: PCDHGA2
  hgvsc: ENST00000394576.2:c.2425-73193T>C
  variant of: http://identifiers.org/hgnc/8700
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000428333
  ensembl transcript: ENST00000518882
  gene symbol: PCDHGA11
  hgvsc: ENST00000518882.1:c.387T>C
  hgvsp: ENST00000518882.1:c.387T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253767
  ensembl protein: ENSP00000381605
  ensembl transcript: ENST00000398604
  gene symbol: PCDHGA8
  hgvsc: ENST00000398604.2:c.2424+26377T>C
  variant of: http://identifiers.org/hgnc/8706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253485
  ensembl protein: ENSP00000429834
  ensembl transcript: ENST00000518069
  gene symbol: PCDHGA5
  hgvsc: ENST00000518069.1:c.2421+54863T>C
  variant of: http://identifiers.org/hgnc/8703
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000381589
  ensembl transcript: ENST00000398587
  gene symbol: PCDHGA11
  hgvsc: ENST00000398587.2:c.387T>C
  hgvsp: ENST00000398587.2:c.387T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262209
  ensembl protein: ENSP00000461862
  ensembl transcript: ENST00000576222
  gene symbol: PCDHGB3
  hgvsc: ENST00000576222.1:c.2415+48805T>C
  variant of: http://identifiers.org/hgnc/8710
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253731
  ensembl protein: ENSP00000429601
  ensembl transcript: ENST00000517434
  gene symbol: PCDHGA6
  hgvsc: ENST00000517434.1:c.2424+45107T>C
  variant of: http://identifiers.org/hgnc/8704
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253846
  ensembl protein: ENSP00000381611
  ensembl transcript: ENST00000398610
  gene symbol: PCDHGA10
  hgvsc: ENST00000398610.2:c.2436+6003T>C
  variant of: http://identifiers.org/hgnc/8697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253537
  ensembl protein: ENSP00000430024
  ensembl transcript: ENST00000518325
  gene symbol: PCDHGA7
  hgvsc: ENST00000518325.1:c.2424+36291T>C
  variant of: http://identifiers.org/hgnc/8705
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254221
  ensembl protein: ENSP00000429273
  ensembl transcript: ENST00000523390
  gene symbol: PCDHGB1
  hgvsc: ENST00000523390.1:c.2409+68945T>C
  variant of: http://identifiers.org/hgnc/8708
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254122
  ensembl protein: ENSP00000381594
  ensembl transcript: ENST00000398594
  gene symbol: PCDHGB7
  hgvsc: ENST00000398594.2:c.2415+1340T>C
  variant of: http://identifiers.org/hgnc/8714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253953
  ensembl protein: ENSP00000428288
  ensembl transcript: ENST00000519479
  gene symbol: PCDHGB4
  hgvsc: ENST00000519479.1:c.2397+31333T>C
  variant of: http://identifiers.org/hgnc/8711
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262576
  ensembl protein: ENSP00000458570
  ensembl transcript: ENST00000571252
  gene symbol: PCDHGA4
  hgvsc: ENST00000571252.1:c.2421+63993T>C
  variant of: http://identifiers.org/hgnc/8702
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254245
  ensembl protein: ENSP00000253812
  ensembl transcript: ENST00000253812
  gene symbol: PCDHGA3
  hgvsc: ENST00000253812.6:c.2425-73193T>C
  variant of: http://identifiers.org/hgnc/8701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253305
  ensembl protein: ENSP00000428603
  ensembl transcript: ENST00000520790
  gene symbol: PCDHGB6
  hgvsc: ENST00000520790.1:c.2418+10994T>C
  variant of: http://identifiers.org/hgnc/8713
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14349
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29977
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp129Asp
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD

http://identifiers.org/exac.variant/5-140801184-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140801184
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140801184
    reference: chr 5
allele count: 1
allele frequency: 8.413259296651523e-6
allele num: 118860
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253910
  ensembl protein: ENSP00000429018
  ensembl transcript: ENST00000522605
  gene symbol: PCDHGB2
  hgvsc: ENST00000522605.1:c.2421+59061C>A
  variant of: http://identifiers.org/hgnc/8709
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000428333
  ensembl transcript: ENST00000518882
  gene symbol: PCDHGA11
  hgvsc: ENST00000518882.1:c.390C>A
  hgvsp: ENSP00000428333.1:p.Asn130Lys
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262209
  ensembl protein: ENSP00000461862
  ensembl transcript: ENST00000576222
  gene symbol: PCDHGB3
  hgvsc: ENST00000576222.1:c.2415+48808C>A
  variant of: http://identifiers.org/hgnc/8710
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254245
  ensembl protein: ENSP00000253812
  ensembl transcript: ENST00000253812
  gene symbol: PCDHGA3
  hgvsc: ENST00000253812.6:c.2425-73190C>A
  variant of: http://identifiers.org/hgnc/8701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081853
  ensembl protein: ENSP00000378077
  ensembl transcript: ENST00000394576
  gene symbol: PCDHGA2
  hgvsc: ENST00000394576.2:c.2425-73190C>A
  variant of: http://identifiers.org/hgnc/8700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253846
  ensembl protein: ENSP00000381611
  ensembl transcript: ENST00000398610
  gene symbol: PCDHGA10
  hgvsc: ENST00000398610.2:c.2436+6006C>A
  variant of: http://identifiers.org/hgnc/8697
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000381589
  ensembl transcript: ENST00000398587
  gene symbol: PCDHGA11
  hgvsc: ENST00000398587.2:c.390C>A
  hgvsp: ENSP00000381589.2:p.Asn130Lys
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254221
  ensembl protein: ENSP00000429273
  ensembl transcript: ENST00000523390
  gene symbol: PCDHGB1
  hgvsc: ENST00000523390.1:c.2409+68948C>A
  variant of: http://identifiers.org/hgnc/8708
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254122
  ensembl protein: ENSP00000381594
  ensembl transcript: ENST00000398594
  gene symbol: PCDHGB7
  hgvsc: ENST00000398594.2:c.2415+1343C>A
  variant of: http://identifiers.org/hgnc/8714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253767
  ensembl protein: ENSP00000381605
  ensembl transcript: ENST00000398604
  gene symbol: PCDHGA8
  hgvsc: ENST00000398604.2:c.2424+26380C>A
  variant of: http://identifiers.org/hgnc/8706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262576
  ensembl protein: ENSP00000458570
  ensembl transcript: ENST00000571252
  gene symbol: PCDHGA4
  hgvsc: ENST00000571252.1:c.2421+63996C>A
  variant of: http://identifiers.org/hgnc/8702
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253537
  ensembl protein: ENSP00000430024
  ensembl transcript: ENST00000518325
  gene symbol: PCDHGA7
  hgvsc: ENST00000518325.1:c.2424+36294C>A
  variant of: http://identifiers.org/hgnc/8705
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204956
  ensembl protein: ENSP00000431083
  ensembl transcript: ENST00000517417
  gene symbol: PCDHGA1
  hgvsc: ENST00000517417.1:c.2422-73190C>A
  variant of: http://identifiers.org/hgnc/8696
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253485
  ensembl protein: ENSP00000429834
  ensembl transcript: ENST00000518069
  gene symbol: PCDHGA5
  hgvsc: ENST00000518069.1:c.2421+54866C>A
  variant of: http://identifiers.org/hgnc/8703
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253953
  ensembl protein: ENSP00000428288
  ensembl transcript: ENST00000519479
  gene symbol: PCDHGB4
  hgvsc: ENST00000519479.1:c.2397+31336C>A
  variant of: http://identifiers.org/hgnc/8711
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253731
  ensembl protein: ENSP00000429601
  ensembl transcript: ENST00000517434
  gene symbol: PCDHGA6
  hgvsc: ENST00000517434.1:c.2424+45110C>A
  variant of: http://identifiers.org/hgnc/8704
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253305
  ensembl protein: ENSP00000428603
  ensembl transcript: ENST00000520790
  gene symbol: PCDHGB6
  hgvsc: ENST00000520790.1:c.2418+10997C>A
  variant of: http://identifiers.org/hgnc/8713
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261934
  ensembl protein: ENSP00000460274
  ensembl transcript: ENST00000573521
  gene symbol: PCDHGA9
  hgvsc: ENST00000573521.1:c.2424+16241C>A
  variant of: http://identifiers.org/hgnc/8707
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3248
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5754
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29998
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asn130Lys
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP

5-140801185-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140801185
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140801185
    reference: chr 5
allele count: 1
allele frequency: 8.412126922171002e-6
allele num: 118876
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254221
  ensembl protein: ENSP00000429273
  ensembl transcript: ENST00000523390
  gene symbol: PCDHGB1
  hgvsc: ENST00000523390.1:c.2409+68949G>A
  variant of: http://identifiers.org/hgnc/8708
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000381589
  ensembl transcript: ENST00000398587
  gene symbol: PCDHGA11
  hgvsc: ENST00000398587.2:c.391G>A
  hgvsp: ENSP00000381589.2:p.Ala131Thr
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253485
  ensembl protein: ENSP00000429834
  ensembl transcript: ENST00000518069
  gene symbol: PCDHGA5
  hgvsc: ENST00000518069.1:c.2421+54867G>A
  variant of: http://identifiers.org/hgnc/8703
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000428333
  ensembl transcript: ENST00000518882
  gene symbol: PCDHGA11
  hgvsc: ENST00000518882.1:c.391G>A
  hgvsp: ENSP00000428333.1:p.Ala131Thr
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254122
  ensembl protein: ENSP00000381594
  ensembl transcript: ENST00000398594
  gene symbol: PCDHGB7
  hgvsc: ENST00000398594.2:c.2415+1344G>A
  variant of: http://identifiers.org/hgnc/8714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253731
  ensembl protein: ENSP00000429601
  ensembl transcript: ENST00000517434
  gene symbol: PCDHGA6
  hgvsc: ENST00000517434.1:c.2424+45111G>A
  variant of: http://identifiers.org/hgnc/8704
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262576
  ensembl protein: ENSP00000458570
  ensembl transcript: ENST00000571252
  gene symbol: PCDHGA4
  hgvsc: ENST00000571252.1:c.2421+63997G>A
  variant of: http://identifiers.org/hgnc/8702
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262209
  ensembl protein: ENSP00000461862
  ensembl transcript: ENST00000576222
  gene symbol: PCDHGB3
  hgvsc: ENST00000576222.1:c.2415+48809G>A
  variant of: http://identifiers.org/hgnc/8710
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081853
  ensembl protein: ENSP00000378077
  ensembl transcript: ENST00000394576
  gene symbol: PCDHGA2
  hgvsc: ENST00000394576.2:c.2425-73189G>A
  variant of: http://identifiers.org/hgnc/8700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254245
  ensembl protein: ENSP00000253812
  ensembl transcript: ENST00000253812
  gene symbol: PCDHGA3
  hgvsc: ENST00000253812.6:c.2425-73189G>A
  variant of: http://identifiers.org/hgnc/8701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253767
  ensembl protein: ENSP00000381605
  ensembl transcript: ENST00000398604
  gene symbol: PCDHGA8
  hgvsc: ENST00000398604.2:c.2424+26381G>A
  variant of: http://identifiers.org/hgnc/8706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253537
  ensembl protein: ENSP00000430024
  ensembl transcript: ENST00000518325
  gene symbol: PCDHGA7
  hgvsc: ENST00000518325.1:c.2424+36295G>A
  variant of: http://identifiers.org/hgnc/8705
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253846
  ensembl protein: ENSP00000381611
  ensembl transcript: ENST00000398610
  gene symbol: PCDHGA10
  hgvsc: ENST00000398610.2:c.2436+6007G>A
  variant of: http://identifiers.org/hgnc/8697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253953
  ensembl protein: ENSP00000428288
  ensembl transcript: ENST00000519479
  gene symbol: PCDHGB4
  hgvsc: ENST00000519479.1:c.2397+31337G>A
  variant of: http://identifiers.org/hgnc/8711
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253910
  ensembl protein: ENSP00000429018
  ensembl transcript: ENST00000522605
  gene symbol: PCDHGB2
  hgvsc: ENST00000522605.1:c.2421+59062G>A
  variant of: http://identifiers.org/hgnc/8709
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204956
  ensembl protein: ENSP00000431083
  ensembl transcript: ENST00000517417
  gene symbol: PCDHGA1
  hgvsc: ENST00000517417.1:c.2422-73189G>A
  variant of: http://identifiers.org/hgnc/8696
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261934
  ensembl protein: ENSP00000460274
  ensembl transcript: ENST00000573521
  gene symbol: PCDHGA9
  hgvsc: ENST00000573521.1:c.2424+16242G>A
  variant of: http://identifiers.org/hgnc/8707
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253305
  ensembl protein: ENSP00000428603
  ensembl transcript: ENST00000520790
  gene symbol: PCDHGB6
  hgvsc: ENST00000520790.1:c.2418+10998G>A
  variant of: http://identifiers.org/hgnc/8713
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30050
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala131Thr
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: Other
population: Latino
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: MQ
site quality: VQSLOD

5-140801185-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140801185
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140801185
    reference: chr 5
allele count: 1
allele frequency: 8.412126922171002e-6
allele num: 118876
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204956
  ensembl protein: ENSP00000431083
  ensembl transcript: ENST00000517417
  gene symbol: PCDHGA1
  hgvsc: ENST00000517417.1:c.2422-73189G>T
  variant of: http://identifiers.org/hgnc/8696
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253537
  ensembl protein: ENSP00000430024
  ensembl transcript: ENST00000518325
  gene symbol: PCDHGA7
  hgvsc: ENST00000518325.1:c.2424+36295G>T
  variant of: http://identifiers.org/hgnc/8705
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253846
  ensembl protein: ENSP00000381611
  ensembl transcript: ENST00000398610
  gene symbol: PCDHGA10
  hgvsc: ENST00000398610.2:c.2436+6007G>T
  variant of: http://identifiers.org/hgnc/8697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253910
  ensembl protein: ENSP00000429018
  ensembl transcript: ENST00000522605
  gene symbol: PCDHGB2
  hgvsc: ENST00000522605.1:c.2421+59062G>T
  variant of: http://identifiers.org/hgnc/8709
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254221
  ensembl protein: ENSP00000429273
  ensembl transcript: ENST00000523390
  gene symbol: PCDHGB1
  hgvsc: ENST00000523390.1:c.2409+68949G>T
  variant of: http://identifiers.org/hgnc/8708
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000381589
  ensembl transcript: ENST00000398587
  gene symbol: PCDHGA11
  hgvsc: ENST00000398587.2:c.391G>T
  hgvsp: ENSP00000381589.2:p.Ala131Ser
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253767
  ensembl protein: ENSP00000381605
  ensembl transcript: ENST00000398604
  gene symbol: PCDHGA8
  hgvsc: ENST00000398604.2:c.2424+26381G>T
  variant of: http://identifiers.org/hgnc/8706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253953
  ensembl protein: ENSP00000428288
  ensembl transcript: ENST00000519479
  gene symbol: PCDHGB4
  hgvsc: ENST00000519479.1:c.2397+31337G>T
  variant of: http://identifiers.org/hgnc/8711
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254122
  ensembl protein: ENSP00000381594
  ensembl transcript: ENST00000398594
  gene symbol: PCDHGB7
  hgvsc: ENST00000398594.2:c.2415+1344G>T
  variant of: http://identifiers.org/hgnc/8714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262576
  ensembl protein: ENSP00000458570
  ensembl transcript: ENST00000571252
  gene symbol: PCDHGA4
  hgvsc: ENST00000571252.1:c.2421+63997G>T
  variant of: http://identifiers.org/hgnc/8702
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262209
  ensembl protein: ENSP00000461862
  ensembl transcript: ENST00000576222
  gene symbol: PCDHGB3
  hgvsc: ENST00000576222.1:c.2415+48809G>T
  variant of: http://identifiers.org/hgnc/8710
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261934
  ensembl protein: ENSP00000460274
  ensembl transcript: ENST00000573521
  gene symbol: PCDHGA9
  hgvsc: ENST00000573521.1:c.2424+16242G>T
  variant of: http://identifiers.org/hgnc/8707
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000428333
  ensembl transcript: ENST00000518882
  gene symbol: PCDHGA11
  hgvsc: ENST00000518882.1:c.391G>T
  hgvsp: ENSP00000428333.1:p.Ala131Ser
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253731
  ensembl protein: ENSP00000429601
  ensembl transcript: ENST00000517434
  gene symbol: PCDHGA6
  hgvsc: ENST00000517434.1:c.2424+45111G>T
  variant of: http://identifiers.org/hgnc/8704
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254245
  ensembl protein: ENSP00000253812
  ensembl transcript: ENST00000253812
  gene symbol: PCDHGA3
  hgvsc: ENST00000253812.6:c.2425-73189G>T
  variant of: http://identifiers.org/hgnc/8701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253305
  ensembl protein: ENSP00000428603
  ensembl transcript: ENST00000520790
  gene symbol: PCDHGB6
  hgvsc: ENST00000520790.1:c.2418+10998G>T
  variant of: http://identifiers.org/hgnc/8713
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253485
  ensembl protein: ENSP00000429834
  ensembl transcript: ENST00000518069
  gene symbol: PCDHGA5
  hgvsc: ENST00000518069.1:c.2421+54867G>T
  variant of: http://identifiers.org/hgnc/8703
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081853
  ensembl protein: ENSP00000378077
  ensembl transcript: ENST00000394576
  gene symbol: PCDHGA2
  hgvsc: ENST00000394576.2:c.2425-73189G>T
  variant of: http://identifiers.org/hgnc/8700
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 30050
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5627
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3240
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala131Ser
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
reference allele: G
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: DP

5-140801186-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140801186
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140801186
    reference: chr 5
allele count: 1
allele frequency: 8.412126922171002e-6
allele num: 118876
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262576
  ensembl protein: ENSP00000458570
  ensembl transcript: ENST00000571252
  gene symbol: PCDHGA4
  hgvsc: ENST00000571252.1:c.2421+63998C>T
  variant of: http://identifiers.org/hgnc/8702
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253485
  ensembl protein: ENSP00000429834
  ensembl transcript: ENST00000518069
  gene symbol: PCDHGA5
  hgvsc: ENST00000518069.1:c.2421+54868C>T
  variant of: http://identifiers.org/hgnc/8703
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204956
  ensembl protein: ENSP00000431083
  ensembl transcript: ENST00000517417
  gene symbol: PCDHGA1
  hgvsc: ENST00000517417.1:c.2422-73188C>T
  variant of: http://identifiers.org/hgnc/8696
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254221
  ensembl protein: ENSP00000429273
  ensembl transcript: ENST00000523390
  gene symbol: PCDHGB1
  hgvsc: ENST00000523390.1:c.2409+68950C>T
  variant of: http://identifiers.org/hgnc/8708
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253731
  ensembl protein: ENSP00000429601
  ensembl transcript: ENST00000517434
  gene symbol: PCDHGA6
  hgvsc: ENST00000517434.1:c.2424+45112C>T
  variant of: http://identifiers.org/hgnc/8704
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254122
  ensembl protein: ENSP00000381594
  ensembl transcript: ENST00000398594
  gene symbol: PCDHGB7
  hgvsc: ENST00000398594.2:c.2415+1345C>T
  variant of: http://identifiers.org/hgnc/8714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253537
  ensembl protein: ENSP00000430024
  ensembl transcript: ENST00000518325
  gene symbol: PCDHGA7
  hgvsc: ENST00000518325.1:c.2424+36296C>T
  variant of: http://identifiers.org/hgnc/8705
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253846
  ensembl protein: ENSP00000381611
  ensembl transcript: ENST00000398610
  gene symbol: PCDHGA10
  hgvsc: ENST00000398610.2:c.2436+6008C>T
  variant of: http://identifiers.org/hgnc/8697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253953
  ensembl protein: ENSP00000428288
  ensembl transcript: ENST00000519479
  gene symbol: PCDHGB4
  hgvsc: ENST00000519479.1:c.2397+31338C>T
  variant of: http://identifiers.org/hgnc/8711
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253305
  ensembl protein: ENSP00000428603
  ensembl transcript: ENST00000520790
  gene symbol: PCDHGB6
  hgvsc: ENST00000520790.1:c.2418+10999C>T
  variant of: http://identifiers.org/hgnc/8713
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000381589
  ensembl transcript: ENST00000398587
  gene symbol: PCDHGA11
  hgvsc: ENST00000398587.2:c.392C>T
  hgvsp: ENSP00000381589.2:p.Ala131Val
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253767
  ensembl protein: ENSP00000381605
  ensembl transcript: ENST00000398604
  gene symbol: PCDHGA8
  hgvsc: ENST00000398604.2:c.2424+26382C>T
  variant of: http://identifiers.org/hgnc/8706
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000428333
  ensembl transcript: ENST00000518882
  gene symbol: PCDHGA11
  hgvsc: ENST00000518882.1:c.392C>T
  hgvsp: ENSP00000428333.1:p.Ala131Val
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262209
  ensembl protein: ENSP00000461862
  ensembl transcript: ENST00000576222
  gene symbol: PCDHGB3
  hgvsc: ENST00000576222.1:c.2415+48810C>T
  variant of: http://identifiers.org/hgnc/8710
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254245
  ensembl protein: ENSP00000253812
  ensembl transcript: ENST00000253812
  gene symbol: PCDHGA3
  hgvsc: ENST00000253812.6:c.2425-73188C>T
  variant of: http://identifiers.org/hgnc/8701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261934
  ensembl protein: ENSP00000460274
  ensembl transcript: ENST00000573521
  gene symbol: PCDHGA9
  hgvsc: ENST00000573521.1:c.2424+16243C>T
  variant of: http://identifiers.org/hgnc/8707
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081853
  ensembl protein: ENSP00000378077
  ensembl transcript: ENST00000394576
  gene symbol: PCDHGA2
  hgvsc: ENST00000394576.2:c.2425-73188C>T
  variant of: http://identifiers.org/hgnc/8700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253910
  ensembl protein: ENSP00000429018
  ensembl transcript: ENST00000522605
  gene symbol: PCDHGB2
  hgvsc: ENST00000522605.1:c.2421+59063C>T
  variant of: http://identifiers.org/hgnc/8709
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3234
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala131Val
num of homozygotes: 0
population: African
population: Latino
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP

5-140801193-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140801193
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140801193
    reference: chr 5
allele count: 1
allele frequency: 8.40279645065878e-6
allele num: 119008
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254221
  ensembl protein: ENSP00000429273
  ensembl transcript: ENST00000523390
  gene symbol: PCDHGB1
  hgvsc: ENST00000523390.1:c.2409+68957C>G
  variant of: http://identifiers.org/hgnc/8708
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254122
  ensembl protein: ENSP00000381594
  ensembl transcript: ENST00000398594
  gene symbol: PCDHGB7
  hgvsc: ENST00000398594.2:c.2415+1352C>G
  variant of: http://identifiers.org/hgnc/8714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253846
  ensembl protein: ENSP00000381611
  ensembl transcript: ENST00000398610
  gene symbol: PCDHGA10
  hgvsc: ENST00000398610.2:c.2436+6015C>G
  variant of: http://identifiers.org/hgnc/8697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253305
  ensembl protein: ENSP00000428603
  ensembl transcript: ENST00000520790
  gene symbol: PCDHGB6
  hgvsc: ENST00000520790.1:c.2418+11006C>G
  variant of: http://identifiers.org/hgnc/8713
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262576
  ensembl protein: ENSP00000458570
  ensembl transcript: ENST00000571252
  gene symbol: PCDHGA4
  hgvsc: ENST00000571252.1:c.2421+64005C>G
  variant of: http://identifiers.org/hgnc/8702
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253910
  ensembl protein: ENSP00000429018
  ensembl transcript: ENST00000522605
  gene symbol: PCDHGB2
  hgvsc: ENST00000522605.1:c.2421+59070C>G
  variant of: http://identifiers.org/hgnc/8709
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253537
  ensembl protein: ENSP00000430024
  ensembl transcript: ENST00000518325
  gene symbol: PCDHGA7
  hgvsc: ENST00000518325.1:c.2424+36303C>G
  variant of: http://identifiers.org/hgnc/8705
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253731
  ensembl protein: ENSP00000429601
  ensembl transcript: ENST00000517434
  gene symbol: PCDHGA6
  hgvsc: ENST00000517434.1:c.2424+45119C>G
  variant of: http://identifiers.org/hgnc/8704
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253485
  ensembl protein: ENSP00000429834
  ensembl transcript: ENST00000518069
  gene symbol: PCDHGA5
  hgvsc: ENST00000518069.1:c.2421+54875C>G
  variant of: http://identifiers.org/hgnc/8703
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262209
  ensembl protein: ENSP00000461862
  ensembl transcript: ENST00000576222
  gene symbol: PCDHGB3
  hgvsc: ENST00000576222.1:c.2415+48817C>G
  variant of: http://identifiers.org/hgnc/8710
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000381589
  ensembl transcript: ENST00000398587
  gene symbol: PCDHGA11
  hgvsc: ENST00000398587.2:c.399C>G
  hgvsp: ENSP00000381589.2:p.Ser133Arg
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000428333
  ensembl transcript: ENST00000518882
  gene symbol: PCDHGA11
  hgvsc: ENST00000518882.1:c.399C>G
  hgvsp: ENSP00000428333.1:p.Ser133Arg
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253767
  ensembl protein: ENSP00000381605
  ensembl transcript: ENST00000398604
  gene symbol: PCDHGA8
  hgvsc: ENST00000398604.2:c.2424+26389C>G
  variant of: http://identifiers.org/hgnc/8706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204956
  ensembl protein: ENSP00000431083
  ensembl transcript: ENST00000517417
  gene symbol: PCDHGA1
  hgvsc: ENST00000517417.1:c.2422-73181C>G
  variant of: http://identifiers.org/hgnc/8696
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254245
  ensembl protein: ENSP00000253812
  ensembl transcript: ENST00000253812
  gene symbol: PCDHGA3
  hgvsc: ENST00000253812.6:c.2425-73181C>G
  variant of: http://identifiers.org/hgnc/8701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253953
  ensembl protein: ENSP00000428288
  ensembl transcript: ENST00000519479
  gene symbol: PCDHGB4
  hgvsc: ENST00000519479.1:c.2397+31345C>G
  variant of: http://identifiers.org/hgnc/8711
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081853
  ensembl protein: ENSP00000378077
  ensembl transcript: ENST00000394576
  gene symbol: PCDHGA2
  hgvsc: ENST00000394576.2:c.2425-73181C>G
  variant of: http://identifiers.org/hgnc/8700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261934
  ensembl protein: ENSP00000460274
  ensembl transcript: ENST00000573521
  gene symbol: PCDHGA9
  hgvsc: ENST00000573521.1:c.2424+16250C>G
  variant of: http://identifiers.org/hgnc/8707
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 790
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser133Arg
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
population: Other
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff

5-140801201-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140801201
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140801201
    reference: chr 5
allele count: 4
allele frequency: 3.360610286828088e-5
allele num: 119026
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253767
  ensembl protein: ENSP00000381605
  ensembl transcript: ENST00000398604
  gene symbol: PCDHGA8
  hgvsc: ENST00000398604.2:c.2424+26397A>G
  variant of: http://identifiers.org/hgnc/8706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261934
  ensembl protein: ENSP00000460274
  ensembl transcript: ENST00000573521
  gene symbol: PCDHGA9
  hgvsc: ENST00000573521.1:c.2424+16258A>G
  variant of: http://identifiers.org/hgnc/8707
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262576
  ensembl protein: ENSP00000458570
  ensembl transcript: ENST00000571252
  gene symbol: PCDHGA4
  hgvsc: ENST00000571252.1:c.2421+64013A>G
  variant of: http://identifiers.org/hgnc/8702
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253910
  ensembl protein: ENSP00000429018
  ensembl transcript: ENST00000522605
  gene symbol: PCDHGB2
  hgvsc: ENST00000522605.1:c.2421+59078A>G
  variant of: http://identifiers.org/hgnc/8709
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253953
  ensembl protein: ENSP00000428288
  ensembl transcript: ENST00000519479
  gene symbol: PCDHGB4
  hgvsc: ENST00000519479.1:c.2397+31353A>G
  variant of: http://identifiers.org/hgnc/8711
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253731
  ensembl protein: ENSP00000429601
  ensembl transcript: ENST00000517434
  gene symbol: PCDHGA6
  hgvsc: ENST00000517434.1:c.2424+45127A>G
  variant of: http://identifiers.org/hgnc/8704
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262209
  ensembl protein: ENSP00000461862
  ensembl transcript: ENST00000576222
  gene symbol: PCDHGB3
  hgvsc: ENST00000576222.1:c.2415+48825A>G
  variant of: http://identifiers.org/hgnc/8710
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000428333
  ensembl transcript: ENST00000518882
  gene symbol: PCDHGA11
  hgvsc: ENST00000518882.1:c.407A>G
  hgvsp: ENSP00000428333.1:p.Glu136Gly
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000381589
  ensembl transcript: ENST00000398587
  gene symbol: PCDHGA11
  hgvsc: ENST00000398587.2:c.407A>G
  hgvsp: ENSP00000381589.2:p.Glu136Gly
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254122
  ensembl protein: ENSP00000381594
  ensembl transcript: ENST00000398594
  gene symbol: PCDHGB7
  hgvsc: ENST00000398594.2:c.2415+1360A>G
  variant of: http://identifiers.org/hgnc/8714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253537
  ensembl protein: ENSP00000430024
  ensembl transcript: ENST00000518325
  gene symbol: PCDHGA7
  hgvsc: ENST00000518325.1:c.2424+36311A>G
  variant of: http://identifiers.org/hgnc/8705
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204956
  ensembl protein: ENSP00000431083
  ensembl transcript: ENST00000517417
  gene symbol: PCDHGA1
  hgvsc: ENST00000517417.1:c.2422-73173A>G
  variant of: http://identifiers.org/hgnc/8696
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254245
  ensembl protein: ENSP00000253812
  ensembl transcript: ENST00000253812
  gene symbol: PCDHGA3
  hgvsc: ENST00000253812.6:c.2425-73173A>G
  variant of: http://identifiers.org/hgnc/8701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253485
  ensembl protein: ENSP00000429834
  ensembl transcript: ENST00000518069
  gene symbol: PCDHGA5
  hgvsc: ENST00000518069.1:c.2421+54883A>G
  variant of: http://identifiers.org/hgnc/8703
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253305
  ensembl protein: ENSP00000428603
  ensembl transcript: ENST00000520790
  gene symbol: PCDHGB6
  hgvsc: ENST00000520790.1:c.2418+11014A>G
  variant of: http://identifiers.org/hgnc/8713
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081853
  ensembl protein: ENSP00000378077
  ensembl transcript: ENST00000394576
  gene symbol: PCDHGA2
  hgvsc: ENST00000394576.2:c.2425-73173A>G
  variant of: http://identifiers.org/hgnc/8700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253846
  ensembl protein: ENSP00000381611
  ensembl transcript: ENST00000398610
  gene symbol: PCDHGA10
  hgvsc: ENST00000398610.2:c.2436+6023A>G
  variant of: http://identifiers.org/hgnc/8697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254221
  ensembl protein: ENSP00000429273
  ensembl transcript: ENST00000523390
  gene symbol: PCDHGB1
  hgvsc: ENST00000523390.1:c.2409+68965A>G
  variant of: http://identifiers.org/hgnc/8708
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1037
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14362
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu136Gly
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: East Asian
reference allele: A
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ

5-140801205-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140801205
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140801205
    reference: chr 5
allele count: 1
allele frequency: 8.40463263350759e-6
allele num: 118982
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253953
  ensembl protein: ENSP00000428288
  ensembl transcript: ENST00000519479
  gene symbol: PCDHGB4
  hgvsc: ENST00000519479.1:c.2397+31357C>G
  variant of: http://identifiers.org/hgnc/8711
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253305
  ensembl protein: ENSP00000428603
  ensembl transcript: ENST00000520790
  gene symbol: PCDHGB6
  hgvsc: ENST00000520790.1:c.2418+11018C>G
  variant of: http://identifiers.org/hgnc/8713
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254122
  ensembl protein: ENSP00000381594
  ensembl transcript: ENST00000398594
  gene symbol: PCDHGB7
  hgvsc: ENST00000398594.2:c.2415+1364C>G
  variant of: http://identifiers.org/hgnc/8714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253910
  ensembl protein: ENSP00000429018
  ensembl transcript: ENST00000522605
  gene symbol: PCDHGB2
  hgvsc: ENST00000522605.1:c.2421+59082C>G
  variant of: http://identifiers.org/hgnc/8709
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253846
  ensembl protein: ENSP00000381611
  ensembl transcript: ENST00000398610
  gene symbol: PCDHGA10
  hgvsc: ENST00000398610.2:c.2436+6027C>G
  variant of: http://identifiers.org/hgnc/8697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261934
  ensembl protein: ENSP00000460274
  ensembl transcript: ENST00000573521
  gene symbol: PCDHGA9
  hgvsc: ENST00000573521.1:c.2424+16262C>G
  variant of: http://identifiers.org/hgnc/8707
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254221
  ensembl protein: ENSP00000429273
  ensembl transcript: ENST00000523390
  gene symbol: PCDHGB1
  hgvsc: ENST00000523390.1:c.2409+68969C>G
  variant of: http://identifiers.org/hgnc/8708
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253767
  ensembl protein: ENSP00000381605
  ensembl transcript: ENST00000398604
  gene symbol: PCDHGA8
  hgvsc: ENST00000398604.2:c.2424+26401C>G
  variant of: http://identifiers.org/hgnc/8706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204956
  ensembl protein: ENSP00000431083
  ensembl transcript: ENST00000517417
  gene symbol: PCDHGA1
  hgvsc: ENST00000517417.1:c.2422-73169C>G
  variant of: http://identifiers.org/hgnc/8696
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000381589
  ensembl transcript: ENST00000398587
  gene symbol: PCDHGA11
  hgvsc: ENST00000398587.2:c.411C>G
  hgvsp: ENSP00000381589.2:p.Asp137Glu
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253537
  ensembl protein: ENSP00000430024
  ensembl transcript: ENST00000518325
  gene symbol: PCDHGA7
  hgvsc: ENST00000518325.1:c.2424+36315C>G
  variant of: http://identifiers.org/hgnc/8705
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000428333
  ensembl transcript: ENST00000518882
  gene symbol: PCDHGA11
  hgvsc: ENST00000518882.1:c.411C>G
  hgvsp: ENSP00000428333.1:p.Asp137Glu
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262576
  ensembl protein: ENSP00000458570
  ensembl transcript: ENST00000571252
  gene symbol: PCDHGA4
  hgvsc: ENST00000571252.1:c.2421+64017C>G
  variant of: http://identifiers.org/hgnc/8702
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254245
  ensembl protein: ENSP00000253812
  ensembl transcript: ENST00000253812
  gene symbol: PCDHGA3
  hgvsc: ENST00000253812.6:c.2425-73169C>G
  variant of: http://identifiers.org/hgnc/8701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253731
  ensembl protein: ENSP00000429601
  ensembl transcript: ENST00000517434
  gene symbol: PCDHGA6
  hgvsc: ENST00000517434.1:c.2424+45131C>G
  variant of: http://identifiers.org/hgnc/8704
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253485
  ensembl protein: ENSP00000429834
  ensembl transcript: ENST00000518069
  gene symbol: PCDHGA5
  hgvsc: ENST00000518069.1:c.2421+54887C>G
  variant of: http://identifiers.org/hgnc/8703
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081853
  ensembl protein: ENSP00000378077
  ensembl transcript: ENST00000394576
  gene symbol: PCDHGA2
  hgvsc: ENST00000394576.2:c.2425-73169C>G
  variant of: http://identifiers.org/hgnc/8700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262209
  ensembl protein: ENSP00000461862
  ensembl transcript: ENST00000576222
  gene symbol: PCDHGB3
  hgvsc: ENST00000576222.1:c.2415+48829C>G
  variant of: http://identifiers.org/hgnc/8710
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5231
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 784
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp137Glu
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
population: European (Finnish)
population: South Asian
reference allele: C
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum

5-140801207-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140801207
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140801207
    reference: chr 5
allele count: 1
allele frequency: 8.398844319021702e-6
allele num: 119064
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081853
  ensembl protein: ENSP00000378077
  ensembl transcript: ENST00000394576
  gene symbol: PCDHGA2
  hgvsc: ENST00000394576.2:c.2425-73167A>T
  variant of: http://identifiers.org/hgnc/8700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261934
  ensembl protein: ENSP00000460274
  ensembl transcript: ENST00000573521
  gene symbol: PCDHGA9
  hgvsc: ENST00000573521.1:c.2424+16264A>T
  variant of: http://identifiers.org/hgnc/8707
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253485
  ensembl protein: ENSP00000429834
  ensembl transcript: ENST00000518069
  gene symbol: PCDHGA5
  hgvsc: ENST00000518069.1:c.2421+54889A>T
  variant of: http://identifiers.org/hgnc/8703
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253767
  ensembl protein: ENSP00000381605
  ensembl transcript: ENST00000398604
  gene symbol: PCDHGA8
  hgvsc: ENST00000398604.2:c.2424+26403A>T
  variant of: http://identifiers.org/hgnc/8706
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000381589
  ensembl transcript: ENST00000398587
  gene symbol: PCDHGA11
  hgvsc: ENST00000398587.2:c.413A>T
  hgvsp: ENSP00000381589.2:p.Glu138Val
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204956
  ensembl protein: ENSP00000431083
  ensembl transcript: ENST00000517417
  gene symbol: PCDHGA1
  hgvsc: ENST00000517417.1:c.2422-73167A>T
  variant of: http://identifiers.org/hgnc/8696
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253731
  ensembl protein: ENSP00000429601
  ensembl transcript: ENST00000517434
  gene symbol: PCDHGA6
  hgvsc: ENST00000517434.1:c.2424+45133A>T
  variant of: http://identifiers.org/hgnc/8704
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262209
  ensembl protein: ENSP00000461862
  ensembl transcript: ENST00000576222
  gene symbol: PCDHGB3
  hgvsc: ENST00000576222.1:c.2415+48831A>T
  variant of: http://identifiers.org/hgnc/8710
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254122
  ensembl protein: ENSP00000381594
  ensembl transcript: ENST00000398594
  gene symbol: PCDHGB7
  hgvsc: ENST00000398594.2:c.2415+1366A>T
  variant of: http://identifiers.org/hgnc/8714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253305
  ensembl protein: ENSP00000428603
  ensembl transcript: ENST00000520790
  gene symbol: PCDHGB6
  hgvsc: ENST00000520790.1:c.2418+11020A>T
  variant of: http://identifiers.org/hgnc/8713
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262576
  ensembl protein: ENSP00000458570
  ensembl transcript: ENST00000571252
  gene symbol: PCDHGA4
  hgvsc: ENST00000571252.1:c.2421+64019A>T
  variant of: http://identifiers.org/hgnc/8702
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253846
  ensembl protein: ENSP00000381611
  ensembl transcript: ENST00000398610
  gene symbol: PCDHGA10
  hgvsc: ENST00000398610.2:c.2436+6029A>T
  variant of: http://identifiers.org/hgnc/8697
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000428333
  ensembl transcript: ENST00000518882
  gene symbol: PCDHGA11
  hgvsc: ENST00000518882.1:c.413A>T
  hgvsp: ENSP00000428333.1:p.Glu138Val
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253537
  ensembl protein: ENSP00000430024
  ensembl transcript: ENST00000518325
  gene symbol: PCDHGA7
  hgvsc: ENST00000518325.1:c.2424+36317A>T
  variant of: http://identifiers.org/hgnc/8705
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254221
  ensembl protein: ENSP00000429273
  ensembl transcript: ENST00000523390
  gene symbol: PCDHGB1
  hgvsc: ENST00000523390.1:c.2409+68971A>T
  variant of: http://identifiers.org/hgnc/8708
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253910
  ensembl protein: ENSP00000429018
  ensembl transcript: ENST00000522605
  gene symbol: PCDHGB2
  hgvsc: ENST00000522605.1:c.2421+59084A>T
  variant of: http://identifiers.org/hgnc/8709
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253953
  ensembl protein: ENSP00000428288
  ensembl transcript: ENST00000519479
  gene symbol: PCDHGB4
  hgvsc: ENST00000519479.1:c.2397+31359A>T
  variant of: http://identifiers.org/hgnc/8711
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254245
  ensembl protein: ENSP00000253812
  ensembl transcript: ENST00000253812
  gene symbol: PCDHGA3
  hgvsc: ENST00000253812.6:c.2425-73167A>T
  variant of: http://identifiers.org/hgnc/8701
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu138Val
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: A
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD

5-140801221-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140801221
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140801221
    reference: chr 5
allele count: 6
allele frequency: 5.034739703957305e-5
allele num: 119172
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254122
  ensembl protein: ENSP00000381594
  ensembl transcript: ENST00000398594
  gene symbol: PCDHGB7
  hgvsc: ENST00000398594.2:c.2415+1380G>A
  variant of: http://identifiers.org/hgnc/8714
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000381589
  ensembl transcript: ENST00000398587
  gene symbol: PCDHGA11
  hgvsc: ENST00000398587.2:c.427G>A
  hgvsp: ENSP00000381589.2:p.Val143Ile
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000428333
  ensembl transcript: ENST00000518882
  gene symbol: PCDHGA11
  hgvsc: ENST00000518882.1:c.427G>A
  hgvsp: ENSP00000428333.1:p.Val143Ile
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254245
  ensembl protein: ENSP00000253812
  ensembl transcript: ENST00000253812
  gene symbol: PCDHGA3
  hgvsc: ENST00000253812.6:c.2425-73153G>A
  variant of: http://identifiers.org/hgnc/8701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253910
  ensembl protein: ENSP00000429018
  ensembl transcript: ENST00000522605
  gene symbol: PCDHGB2
  hgvsc: ENST00000522605.1:c.2421+59098G>A
  variant of: http://identifiers.org/hgnc/8709
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262576
  ensembl protein: ENSP00000458570
  ensembl transcript: ENST00000571252
  gene symbol: PCDHGA4
  hgvsc: ENST00000571252.1:c.2421+64033G>A
  variant of: http://identifiers.org/hgnc/8702
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253485
  ensembl protein: ENSP00000429834
  ensembl transcript: ENST00000518069
  gene symbol: PCDHGA5
  hgvsc: ENST00000518069.1:c.2421+54903G>A
  variant of: http://identifiers.org/hgnc/8703
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204956
  ensembl protein: ENSP00000431083
  ensembl transcript: ENST00000517417
  gene symbol: PCDHGA1
  hgvsc: ENST00000517417.1:c.2422-73153G>A
  variant of: http://identifiers.org/hgnc/8696
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253537
  ensembl protein: ENSP00000430024
  ensembl transcript: ENST00000518325
  gene symbol: PCDHGA7
  hgvsc: ENST00000518325.1:c.2424+36331G>A
  variant of: http://identifiers.org/hgnc/8705
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254221
  ensembl protein: ENSP00000429273
  ensembl transcript: ENST00000523390
  gene symbol: PCDHGB1
  hgvsc: ENST00000523390.1:c.2409+68985G>A
  variant of: http://identifiers.org/hgnc/8708
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253767
  ensembl protein: ENSP00000381605
  ensembl transcript: ENST00000398604
  gene symbol: PCDHGA8
  hgvsc: ENST00000398604.2:c.2424+26417G>A
  variant of: http://identifiers.org/hgnc/8706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253953
  ensembl protein: ENSP00000428288
  ensembl transcript: ENST00000519479
  gene symbol: PCDHGB4
  hgvsc: ENST00000519479.1:c.2397+31373G>A
  variant of: http://identifiers.org/hgnc/8711
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262209
  ensembl protein: ENSP00000461862
  ensembl transcript: ENST00000576222
  gene symbol: PCDHGB3
  hgvsc: ENST00000576222.1:c.2415+48845G>A
  variant of: http://identifiers.org/hgnc/8710
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253305
  ensembl protein: ENSP00000428603
  ensembl transcript: ENST00000520790
  gene symbol: PCDHGB6
  hgvsc: ENST00000520790.1:c.2418+11034G>A
  variant of: http://identifiers.org/hgnc/8713
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253846
  ensembl protein: ENSP00000381611
  ensembl transcript: ENST00000398610
  gene symbol: PCDHGA10
  hgvsc: ENST00000398610.2:c.2436+6043G>A
  variant of: http://identifiers.org/hgnc/8697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253731
  ensembl protein: ENSP00000429601
  ensembl transcript: ENST00000517434
  gene symbol: PCDHGA6
  hgvsc: ENST00000517434.1:c.2424+45147G>A
  variant of: http://identifiers.org/hgnc/8704
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081853
  ensembl protein: ENSP00000378077
  ensembl transcript: ENST00000394576
  gene symbol: PCDHGA2
  hgvsc: ENST00000394576.2:c.2425-73153G>A
  variant of: http://identifiers.org/hgnc/8700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261934
  ensembl protein: ENSP00000460274
  ensembl transcript: ENST00000573521
  gene symbol: PCDHGA9
  hgvsc: ENST00000573521.1:c.2424+16278G>A
  variant of: http://identifiers.org/hgnc/8707
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 738
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5232
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val143Ile
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
population: East Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff

5-140801224-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140801224
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140801224
    reference: chr 5
allele count: 1
allele frequency: 8.389543273264204e-6
allele num: 119196
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261934
  ensembl protein: ENSP00000460274
  ensembl transcript: ENST00000573521
  gene symbol: PCDHGA9
  hgvsc: ENST00000573521.1:c.2424+16281A>G
  variant of: http://identifiers.org/hgnc/8707
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253731
  ensembl protein: ENSP00000429601
  ensembl transcript: ENST00000517434
  gene symbol: PCDHGA6
  hgvsc: ENST00000517434.1:c.2424+45150A>G
  variant of: http://identifiers.org/hgnc/8704
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253846
  ensembl protein: ENSP00000381611
  ensembl transcript: ENST00000398610
  gene symbol: PCDHGA10
  hgvsc: ENST00000398610.2:c.2436+6046A>G
  variant of: http://identifiers.org/hgnc/8697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262209
  ensembl protein: ENSP00000461862
  ensembl transcript: ENST00000576222
  gene symbol: PCDHGB3
  hgvsc: ENST00000576222.1:c.2415+48848A>G
  variant of: http://identifiers.org/hgnc/8710
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253537
  ensembl protein: ENSP00000430024
  ensembl transcript: ENST00000518325
  gene symbol: PCDHGA7
  hgvsc: ENST00000518325.1:c.2424+36334A>G
  variant of: http://identifiers.org/hgnc/8705
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262576
  ensembl protein: ENSP00000458570
  ensembl transcript: ENST00000571252
  gene symbol: PCDHGA4
  hgvsc: ENST00000571252.1:c.2421+64036A>G
  variant of: http://identifiers.org/hgnc/8702
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253305
  ensembl protein: ENSP00000428603
  ensembl transcript: ENST00000520790
  gene symbol: PCDHGB6
  hgvsc: ENST00000520790.1:c.2418+11037A>G
  variant of: http://identifiers.org/hgnc/8713
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253767
  ensembl protein: ENSP00000381605
  ensembl transcript: ENST00000398604
  gene symbol: PCDHGA8
  hgvsc: ENST00000398604.2:c.2424+26420A>G
  variant of: http://identifiers.org/hgnc/8706
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000381589
  ensembl transcript: ENST00000398587
  gene symbol: PCDHGA11
  hgvsc: ENST00000398587.2:c.430A>G
  hgvsp: ENSP00000381589.2:p.Ser144Gly
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253910
  ensembl protein: ENSP00000429018
  ensembl transcript: ENST00000522605
  gene symbol: PCDHGB2
  hgvsc: ENST00000522605.1:c.2421+59101A>G
  variant of: http://identifiers.org/hgnc/8709
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254221
  ensembl protein: ENSP00000429273
  ensembl transcript: ENST00000523390
  gene symbol: PCDHGB1
  hgvsc: ENST00000523390.1:c.2409+68988A>G
  variant of: http://identifiers.org/hgnc/8708
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000428333
  ensembl transcript: ENST00000518882
  gene symbol: PCDHGA11
  hgvsc: ENST00000518882.1:c.430A>G
  hgvsp: ENSP00000428333.1:p.Ser144Gly
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204956
  ensembl protein: ENSP00000431083
  ensembl transcript: ENST00000517417
  gene symbol: PCDHGA1
  hgvsc: ENST00000517417.1:c.2422-73150A>G
  variant of: http://identifiers.org/hgnc/8696
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254122
  ensembl protein: ENSP00000381594
  ensembl transcript: ENST00000398594
  gene symbol: PCDHGB7
  hgvsc: ENST00000398594.2:c.2415+1383A>G
  variant of: http://identifiers.org/hgnc/8714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253953
  ensembl protein: ENSP00000428288
  ensembl transcript: ENST00000519479
  gene symbol: PCDHGB4
  hgvsc: ENST00000519479.1:c.2397+31376A>G
  variant of: http://identifiers.org/hgnc/8711
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081853
  ensembl protein: ENSP00000378077
  ensembl transcript: ENST00000394576
  gene symbol: PCDHGA2
  hgvsc: ENST00000394576.2:c.2425-73150A>G
  variant of: http://identifiers.org/hgnc/8700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253485
  ensembl protein: ENSP00000429834
  ensembl transcript: ENST00000518069
  gene symbol: PCDHGA5
  hgvsc: ENST00000518069.1:c.2421+54906A>G
  variant of: http://identifiers.org/hgnc/8703
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254245
  ensembl protein: ENSP00000253812
  ensembl transcript: ENST00000253812
  gene symbol: PCDHGA3
  hgvsc: ENST00000253812.6:c.2425-73150A>G
  variant of: http://identifiers.org/hgnc/8701
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30668
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3233
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser144Gly
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum

5-140801226-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140801226
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140801226
    reference: chr 5
allele count: 1
allele frequency: 8.389261744966442e-6
allele num: 119200
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081853
  ensembl protein: ENSP00000378077
  ensembl transcript: ENST00000394576
  gene symbol: PCDHGA2
  hgvsc: ENST00000394576.2:c.2425-73148T>C
  variant of: http://identifiers.org/hgnc/8700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253846
  ensembl protein: ENSP00000381611
  ensembl transcript: ENST00000398610
  gene symbol: PCDHGA10
  hgvsc: ENST00000398610.2:c.2436+6048T>C
  variant of: http://identifiers.org/hgnc/8697
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000428333
  ensembl transcript: ENST00000518882
  gene symbol: PCDHGA11
  hgvsc: ENST00000518882.1:c.432T>C
  hgvsp: ENST00000518882.1:c.432T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000381589
  ensembl transcript: ENST00000398587
  gene symbol: PCDHGA11
  hgvsc: ENST00000398587.2:c.432T>C
  hgvsp: ENST00000398587.2:c.432T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253767
  ensembl protein: ENSP00000381605
  ensembl transcript: ENST00000398604
  gene symbol: PCDHGA8
  hgvsc: ENST00000398604.2:c.2424+26422T>C
  variant of: http://identifiers.org/hgnc/8706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253731
  ensembl protein: ENSP00000429601
  ensembl transcript: ENST00000517434
  gene symbol: PCDHGA6
  hgvsc: ENST00000517434.1:c.2424+45152T>C
  variant of: http://identifiers.org/hgnc/8704
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254122
  ensembl protein: ENSP00000381594
  ensembl transcript: ENST00000398594
  gene symbol: PCDHGB7
  hgvsc: ENST00000398594.2:c.2415+1385T>C
  variant of: http://identifiers.org/hgnc/8714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204956
  ensembl protein: ENSP00000431083
  ensembl transcript: ENST00000517417
  gene symbol: PCDHGA1
  hgvsc: ENST00000517417.1:c.2422-73148T>C
  variant of: http://identifiers.org/hgnc/8696
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253305
  ensembl protein: ENSP00000428603
  ensembl transcript: ENST00000520790
  gene symbol: PCDHGB6
  hgvsc: ENST00000520790.1:c.2418+11039T>C
  variant of: http://identifiers.org/hgnc/8713
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253537
  ensembl protein: ENSP00000430024
  ensembl transcript: ENST00000518325
  gene symbol: PCDHGA7
  hgvsc: ENST00000518325.1:c.2424+36336T>C
  variant of: http://identifiers.org/hgnc/8705
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253953
  ensembl protein: ENSP00000428288
  ensembl transcript: ENST00000519479
  gene symbol: PCDHGB4
  hgvsc: ENST00000519479.1:c.2397+31378T>C
  variant of: http://identifiers.org/hgnc/8711
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254221
  ensembl protein: ENSP00000429273
  ensembl transcript: ENST00000523390
  gene symbol: PCDHGB1
  hgvsc: ENST00000523390.1:c.2409+68990T>C
  variant of: http://identifiers.org/hgnc/8708
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253485
  ensembl protein: ENSP00000429834
  ensembl transcript: ENST00000518069
  gene symbol: PCDHGA5
  hgvsc: ENST00000518069.1:c.2421+54908T>C
  variant of: http://identifiers.org/hgnc/8703
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262209
  ensembl protein: ENSP00000461862
  ensembl transcript: ENST00000576222
  gene symbol: PCDHGB3
  hgvsc: ENST00000576222.1:c.2415+48850T>C
  variant of: http://identifiers.org/hgnc/8710
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254245
  ensembl protein: ENSP00000253812
  ensembl transcript: ENST00000253812
  gene symbol: PCDHGA3
  hgvsc: ENST00000253812.6:c.2425-73148T>C
  variant of: http://identifiers.org/hgnc/8701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262576
  ensembl protein: ENSP00000458570
  ensembl transcript: ENST00000571252
  gene symbol: PCDHGA4
  hgvsc: ENST00000571252.1:c.2421+64038T>C
  variant of: http://identifiers.org/hgnc/8702
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261934
  ensembl protein: ENSP00000460274
  ensembl transcript: ENST00000573521
  gene symbol: PCDHGA9
  hgvsc: ENST00000573521.1:c.2424+16283T>C
  variant of: http://identifiers.org/hgnc/8707
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253910
  ensembl protein: ENSP00000429018
  ensembl transcript: ENST00000522605
  gene symbol: PCDHGB2
  hgvsc: ENST00000522605.1:c.2421+59103T>C
  variant of: http://identifiers.org/hgnc/8709
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 14566
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser144Ser
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum

5-140801227-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140801227
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140801227
    reference: chr 5
allele count: 1
allele frequency: 8.393063971933595e-6
allele num: 119146
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253485
  ensembl protein: ENSP00000429834
  ensembl transcript: ENST00000518069
  gene symbol: PCDHGA5
  hgvsc: ENST00000518069.1:c.2421+54909G>A
  variant of: http://identifiers.org/hgnc/8703
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253910
  ensembl protein: ENSP00000429018
  ensembl transcript: ENST00000522605
  gene symbol: PCDHGB2
  hgvsc: ENST00000522605.1:c.2421+59104G>A
  variant of: http://identifiers.org/hgnc/8709
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000381589
  ensembl transcript: ENST00000398587
  gene symbol: PCDHGA11
  hgvsc: ENST00000398587.2:c.433G>A
  hgvsp: ENSP00000381589.2:p.Glu145Lys
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254221
  ensembl protein: ENSP00000429273
  ensembl transcript: ENST00000523390
  gene symbol: PCDHGB1
  hgvsc: ENST00000523390.1:c.2409+68991G>A
  variant of: http://identifiers.org/hgnc/8708
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204956
  ensembl protein: ENSP00000431083
  ensembl transcript: ENST00000517417
  gene symbol: PCDHGA1
  hgvsc: ENST00000517417.1:c.2422-73147G>A
  variant of: http://identifiers.org/hgnc/8696
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253953
  ensembl protein: ENSP00000428288
  ensembl transcript: ENST00000519479
  gene symbol: PCDHGB4
  hgvsc: ENST00000519479.1:c.2397+31379G>A
  variant of: http://identifiers.org/hgnc/8711
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000428333
  ensembl transcript: ENST00000518882
  gene symbol: PCDHGA11
  hgvsc: ENST00000518882.1:c.433G>A
  hgvsp: ENSP00000428333.1:p.Glu145Lys
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261934
  ensembl protein: ENSP00000460274
  ensembl transcript: ENST00000573521
  gene symbol: PCDHGA9
  hgvsc: ENST00000573521.1:c.2424+16284G>A
  variant of: http://identifiers.org/hgnc/8707
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253731
  ensembl protein: ENSP00000429601
  ensembl transcript: ENST00000517434
  gene symbol: PCDHGA6
  hgvsc: ENST00000517434.1:c.2424+45153G>A
  variant of: http://identifiers.org/hgnc/8704
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262209
  ensembl protein: ENSP00000461862
  ensembl transcript: ENST00000576222
  gene symbol: PCDHGB3
  hgvsc: ENST00000576222.1:c.2415+48851G>A
  variant of: http://identifiers.org/hgnc/8710
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081853
  ensembl protein: ENSP00000378077
  ensembl transcript: ENST00000394576
  gene symbol: PCDHGA2
  hgvsc: ENST00000394576.2:c.2425-73147G>A
  variant of: http://identifiers.org/hgnc/8700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253767
  ensembl protein: ENSP00000381605
  ensembl transcript: ENST00000398604
  gene symbol: PCDHGA8
  hgvsc: ENST00000398604.2:c.2424+26423G>A
  variant of: http://identifiers.org/hgnc/8706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253537
  ensembl protein: ENSP00000430024
  ensembl transcript: ENST00000518325
  gene symbol: PCDHGA7
  hgvsc: ENST00000518325.1:c.2424+36337G>A
  variant of: http://identifiers.org/hgnc/8705
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253305
  ensembl protein: ENSP00000428603
  ensembl transcript: ENST00000520790
  gene symbol: PCDHGB6
  hgvsc: ENST00000520790.1:c.2418+11040G>A
  variant of: http://identifiers.org/hgnc/8713
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254122
  ensembl protein: ENSP00000381594
  ensembl transcript: ENST00000398594
  gene symbol: PCDHGB7
  hgvsc: ENST00000398594.2:c.2415+1386G>A
  variant of: http://identifiers.org/hgnc/8714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262576
  ensembl protein: ENSP00000458570
  ensembl transcript: ENST00000571252
  gene symbol: PCDHGA4
  hgvsc: ENST00000571252.1:c.2421+64039G>A
  variant of: http://identifiers.org/hgnc/8702
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253846
  ensembl protein: ENSP00000381611
  ensembl transcript: ENST00000398610
  gene symbol: PCDHGA10
  hgvsc: ENST00000398610.2:c.2436+6049G>A
  variant of: http://identifiers.org/hgnc/8697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254245
  ensembl protein: ENSP00000253812
  ensembl transcript: ENST00000253812
  gene symbol: PCDHGA3
  hgvsc: ENST00000253812.6:c.2425-73147G>A
  variant of: http://identifiers.org/hgnc/8701
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 14586
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5255
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1031
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu145Lys
num of homozygotes: 0
population: Latino
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ

5-140801248-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140801248
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140801248
    reference: chr 5
allele count: 1
allele frequency: 8.380403265005112e-6
allele num: 119326
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253485
  ensembl protein: ENSP00000429834
  ensembl transcript: ENST00000518069
  gene symbol: PCDHGA5
  hgvsc: ENST00000518069.1:c.2421+54930C>T
  variant of: http://identifiers.org/hgnc/8703
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000381589
  ensembl transcript: ENST00000398587
  gene symbol: PCDHGA11
  hgvsc: ENST00000398587.2:c.454C>T
  hgvsp: ENSP00000381589.2:p.Arg152Ter
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254221
  ensembl protein: ENSP00000429273
  ensembl transcript: ENST00000523390
  gene symbol: PCDHGB1
  hgvsc: ENST00000523390.1:c.2409+69012C>T
  variant of: http://identifiers.org/hgnc/8708
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261934
  ensembl protein: ENSP00000460274
  ensembl transcript: ENST00000573521
  gene symbol: PCDHGA9
  hgvsc: ENST00000573521.1:c.2424+16305C>T
  variant of: http://identifiers.org/hgnc/8707
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253305
  ensembl protein: ENSP00000428603
  ensembl transcript: ENST00000520790
  gene symbol: PCDHGB6
  hgvsc: ENST00000520790.1:c.2418+11061C>T
  variant of: http://identifiers.org/hgnc/8713
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253910
  ensembl protein: ENSP00000429018
  ensembl transcript: ENST00000522605
  gene symbol: PCDHGB2
  hgvsc: ENST00000522605.1:c.2421+59125C>T
  variant of: http://identifiers.org/hgnc/8709
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253731
  ensembl protein: ENSP00000429601
  ensembl transcript: ENST00000517434
  gene symbol: PCDHGA6
  hgvsc: ENST00000517434.1:c.2424+45174C>T
  variant of: http://identifiers.org/hgnc/8704
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253767
  ensembl protein: ENSP00000381605
  ensembl transcript: ENST00000398604
  gene symbol: PCDHGA8
  hgvsc: ENST00000398604.2:c.2424+26444C>T
  variant of: http://identifiers.org/hgnc/8706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254245
  ensembl protein: ENSP00000253812
  ensembl transcript: ENST00000253812
  gene symbol: PCDHGA3
  hgvsc: ENST00000253812.6:c.2425-73126C>T
  variant of: http://identifiers.org/hgnc/8701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262209
  ensembl protein: ENSP00000461862
  ensembl transcript: ENST00000576222
  gene symbol: PCDHGB3
  hgvsc: ENST00000576222.1:c.2415+48872C>T
  variant of: http://identifiers.org/hgnc/8710
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254122
  ensembl protein: ENSP00000381594
  ensembl transcript: ENST00000398594
  gene symbol: PCDHGB7
  hgvsc: ENST00000398594.2:c.2415+1407C>T
  variant of: http://identifiers.org/hgnc/8714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253537
  ensembl protein: ENSP00000430024
  ensembl transcript: ENST00000518325
  gene symbol: PCDHGA7
  hgvsc: ENST00000518325.1:c.2424+36358C>T
  variant of: http://identifiers.org/hgnc/8705
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204956
  ensembl protein: ENSP00000431083
  ensembl transcript: ENST00000517417
  gene symbol: PCDHGA1
  hgvsc: ENST00000517417.1:c.2422-73126C>T
  variant of: http://identifiers.org/hgnc/8696
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253846
  ensembl protein: ENSP00000381611
  ensembl transcript: ENST00000398610
  gene symbol: PCDHGA10
  hgvsc: ENST00000398610.2:c.2436+6070C>T
  variant of: http://identifiers.org/hgnc/8697
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000428333
  ensembl transcript: ENST00000518882
  gene symbol: PCDHGA11
  hgvsc: ENST00000518882.1:c.454C>T
  hgvsp: ENSP00000428333.1:p.Arg152Ter
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253953
  ensembl protein: ENSP00000428288
  ensembl transcript: ENST00000519479
  gene symbol: PCDHGB4
  hgvsc: ENST00000519479.1:c.2397+31400C>T
  variant of: http://identifiers.org/hgnc/8711
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262576
  ensembl protein: ENSP00000458570
  ensembl transcript: ENST00000571252
  gene symbol: PCDHGA4
  hgvsc: ENST00000571252.1:c.2421+64060C>T
  variant of: http://identifiers.org/hgnc/8702
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081853
  ensembl protein: ENSP00000378077
  ensembl transcript: ENST00000394576
  gene symbol: PCDHGA2
  hgvsc: ENST00000394576.2:c.2425-73126C>T
  variant of: http://identifiers.org/hgnc/8700
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2764
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3948
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31330
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Arg152Ter
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: QD

5-140801254-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140801254
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140801254
    reference: chr 5
allele count: 2
allele frequency: 1.674396798553321e-5
allele num: 119446
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081853
  ensembl protein: ENSP00000378077
  ensembl transcript: ENST00000394576
  gene symbol: PCDHGA2
  hgvsc: ENST00000394576.2:c.2425-73120G>C
  variant of: http://identifiers.org/hgnc/8700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253731
  ensembl protein: ENSP00000429601
  ensembl transcript: ENST00000517434
  gene symbol: PCDHGA6
  hgvsc: ENST00000517434.1:c.2424+45180G>C
  variant of: http://identifiers.org/hgnc/8704
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262209
  ensembl protein: ENSP00000461862
  ensembl transcript: ENST00000576222
  gene symbol: PCDHGB3
  hgvsc: ENST00000576222.1:c.2415+48878G>C
  variant of: http://identifiers.org/hgnc/8710
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254221
  ensembl protein: ENSP00000429273
  ensembl transcript: ENST00000523390
  gene symbol: PCDHGB1
  hgvsc: ENST00000523390.1:c.2409+69018G>C
  variant of: http://identifiers.org/hgnc/8708
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261934
  ensembl protein: ENSP00000460274
  ensembl transcript: ENST00000573521
  gene symbol: PCDHGA9
  hgvsc: ENST00000573521.1:c.2424+16311G>C
  variant of: http://identifiers.org/hgnc/8707
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253305
  ensembl protein: ENSP00000428603
  ensembl transcript: ENST00000520790
  gene symbol: PCDHGB6
  hgvsc: ENST00000520790.1:c.2418+11067G>C
  variant of: http://identifiers.org/hgnc/8713
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253767
  ensembl protein: ENSP00000381605
  ensembl transcript: ENST00000398604
  gene symbol: PCDHGA8
  hgvsc: ENST00000398604.2:c.2424+26450G>C
  variant of: http://identifiers.org/hgnc/8706
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000381589
  ensembl transcript: ENST00000398587
  gene symbol: PCDHGA11
  hgvsc: ENST00000398587.2:c.460G>C
  hgvsp: ENSP00000381589.2:p.Ala154Pro
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262576
  ensembl protein: ENSP00000458570
  ensembl transcript: ENST00000571252
  gene symbol: PCDHGA4
  hgvsc: ENST00000571252.1:c.2421+64066G>C
  variant of: http://identifiers.org/hgnc/8702
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253953
  ensembl protein: ENSP00000428288
  ensembl transcript: ENST00000519479
  gene symbol: PCDHGB4
  hgvsc: ENST00000519479.1:c.2397+31406G>C
  variant of: http://identifiers.org/hgnc/8711
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000428333
  ensembl transcript: ENST00000518882
  gene symbol: PCDHGA11
  hgvsc: ENST00000518882.1:c.460G>C
  hgvsp: ENSP00000428333.1:p.Ala154Pro
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253910
  ensembl protein: ENSP00000429018
  ensembl transcript: ENST00000522605
  gene symbol: PCDHGB2
  hgvsc: ENST00000522605.1:c.2421+59131G>C
  variant of: http://identifiers.org/hgnc/8709
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253537
  ensembl protein: ENSP00000430024
  ensembl transcript: ENST00000518325
  gene symbol: PCDHGA7
  hgvsc: ENST00000518325.1:c.2424+36364G>C
  variant of: http://identifiers.org/hgnc/8705
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204956
  ensembl protein: ENSP00000431083
  ensembl transcript: ENST00000517417
  gene symbol: PCDHGA1
  hgvsc: ENST00000517417.1:c.2422-73120G>C
  variant of: http://identifiers.org/hgnc/8696
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254245
  ensembl protein: ENSP00000253812
  ensembl transcript: ENST00000253812
  gene symbol: PCDHGA3
  hgvsc: ENST00000253812.6:c.2425-73120G>C
  variant of: http://identifiers.org/hgnc/8701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253846
  ensembl protein: ENSP00000381611
  ensembl transcript: ENST00000398610
  gene symbol: PCDHGA10
  hgvsc: ENST00000398610.2:c.2436+6076G>C
  variant of: http://identifiers.org/hgnc/8697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253485
  ensembl protein: ENSP00000429834
  ensembl transcript: ENST00000518069
  gene symbol: PCDHGA5
  hgvsc: ENST00000518069.1:c.2421+54936G>C
  variant of: http://identifiers.org/hgnc/8703
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254122
  ensembl protein: ENSP00000381594
  ensembl transcript: ENST00000398594
  gene symbol: PCDHGB7
  hgvsc: ENST00000398594.2:c.2415+1413G>C
  variant of: http://identifiers.org/hgnc/8714
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2547
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala154Pro
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum

5-140801262-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140801262
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140801262
    reference: chr 5
allele count: 3
allele frequency: 2.508780732563974e-5
allele num: 119580
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261934
  ensembl protein: ENSP00000460274
  ensembl transcript: ENST00000573521
  gene symbol: PCDHGA9
  hgvsc: ENST00000573521.1:c.2424+16319T>C
  variant of: http://identifiers.org/hgnc/8707
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253731
  ensembl protein: ENSP00000429601
  ensembl transcript: ENST00000517434
  gene symbol: PCDHGA6
  hgvsc: ENST00000517434.1:c.2424+45188T>C
  variant of: http://identifiers.org/hgnc/8704
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204956
  ensembl protein: ENSP00000431083
  ensembl transcript: ENST00000517417
  gene symbol: PCDHGA1
  hgvsc: ENST00000517417.1:c.2422-73112T>C
  variant of: http://identifiers.org/hgnc/8696
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253953
  ensembl protein: ENSP00000428288
  ensembl transcript: ENST00000519479
  gene symbol: PCDHGB4
  hgvsc: ENST00000519479.1:c.2397+31414T>C
  variant of: http://identifiers.org/hgnc/8711
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253846
  ensembl protein: ENSP00000381611
  ensembl transcript: ENST00000398610
  gene symbol: PCDHGA10
  hgvsc: ENST00000398610.2:c.2436+6084T>C
  variant of: http://identifiers.org/hgnc/8697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254245
  ensembl protein: ENSP00000253812
  ensembl transcript: ENST00000253812
  gene symbol: PCDHGA3
  hgvsc: ENST00000253812.6:c.2425-73112T>C
  variant of: http://identifiers.org/hgnc/8701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253485
  ensembl protein: ENSP00000429834
  ensembl transcript: ENST00000518069
  gene symbol: PCDHGA5
  hgvsc: ENST00000518069.1:c.2421+54944T>C
  variant of: http://identifiers.org/hgnc/8703
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000428333
  ensembl transcript: ENST00000518882
  gene symbol: PCDHGA11
  hgvsc: ENST00000518882.1:c.468T>C
  hgvsp: ENST00000518882.1:c.468T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262576
  ensembl protein: ENSP00000458570
  ensembl transcript: ENST00000571252
  gene symbol: PCDHGA4
  hgvsc: ENST00000571252.1:c.2421+64074T>C
  variant of: http://identifiers.org/hgnc/8702
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253537
  ensembl protein: ENSP00000430024
  ensembl transcript: ENST00000518325
  gene symbol: PCDHGA7
  hgvsc: ENST00000518325.1:c.2424+36372T>C
  variant of: http://identifiers.org/hgnc/8705
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253767
  ensembl protein: ENSP00000381605
  ensembl transcript: ENST00000398604
  gene symbol: PCDHGA8
  hgvsc: ENST00000398604.2:c.2424+26458T>C
  variant of: http://identifiers.org/hgnc/8706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262209
  ensembl protein: ENSP00000461862
  ensembl transcript: ENST00000576222
  gene symbol: PCDHGB3
  hgvsc: ENST00000576222.1:c.2415+48886T>C
  variant of: http://identifiers.org/hgnc/8710
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254221
  ensembl protein: ENSP00000429273
  ensembl transcript: ENST00000523390
  gene symbol: PCDHGB1
  hgvsc: ENST00000523390.1:c.2409+69026T>C
  variant of: http://identifiers.org/hgnc/8708
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253910
  ensembl protein: ENSP00000429018
  ensembl transcript: ENST00000522605
  gene symbol: PCDHGB2
  hgvsc: ENST00000522605.1:c.2421+59139T>C
  variant of: http://identifiers.org/hgnc/8709
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081853
  ensembl protein: ENSP00000378077
  ensembl transcript: ENST00000394576
  gene symbol: PCDHGA2
  hgvsc: ENST00000394576.2:c.2425-73112T>C
  variant of: http://identifiers.org/hgnc/8700
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000381589
  ensembl transcript: ENST00000398587
  gene symbol: PCDHGA11
  hgvsc: ENST00000398587.2:c.468T>C
  hgvsp: ENST00000398587.2:c.468T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253305
  ensembl protein: ENSP00000428603
  ensembl transcript: ENST00000520790
  gene symbol: PCDHGB6
  hgvsc: ENST00000520790.1:c.2418+11075T>C
  variant of: http://identifiers.org/hgnc/8713
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254122
  ensembl protein: ENSP00000381594
  ensembl transcript: ENST00000398594
  gene symbol: PCDHGB7
  hgvsc: ENST00000398594.2:c.2415+1421T>C
  variant of: http://identifiers.org/hgnc/8714
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3093
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16486
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro156Pro
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
reference allele: T
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

5-140801266-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140801266
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140801266
    reference: chr 5
allele count: 2
allele frequency: 1.671569938486226e-5
allele num: 119648
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254245
  ensembl protein: ENSP00000253812
  ensembl transcript: ENST00000253812
  gene symbol: PCDHGA3
  hgvsc: ENST00000253812.6:c.2425-73108G>T
  variant of: http://identifiers.org/hgnc/8701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253910
  ensembl protein: ENSP00000429018
  ensembl transcript: ENST00000522605
  gene symbol: PCDHGB2
  hgvsc: ENST00000522605.1:c.2421+59143G>T
  variant of: http://identifiers.org/hgnc/8709
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262576
  ensembl protein: ENSP00000458570
  ensembl transcript: ENST00000571252
  gene symbol: PCDHGA4
  hgvsc: ENST00000571252.1:c.2421+64078G>T
  variant of: http://identifiers.org/hgnc/8702
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253731
  ensembl protein: ENSP00000429601
  ensembl transcript: ENST00000517434
  gene symbol: PCDHGA6
  hgvsc: ENST00000517434.1:c.2424+45192G>T
  variant of: http://identifiers.org/hgnc/8704
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253767
  ensembl protein: ENSP00000381605
  ensembl transcript: ENST00000398604
  gene symbol: PCDHGA8
  hgvsc: ENST00000398604.2:c.2424+26462G>T
  variant of: http://identifiers.org/hgnc/8706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262209
  ensembl protein: ENSP00000461862
  ensembl transcript: ENST00000576222
  gene symbol: PCDHGB3
  hgvsc: ENST00000576222.1:c.2415+48890G>T
  variant of: http://identifiers.org/hgnc/8710
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254122
  ensembl protein: ENSP00000381594
  ensembl transcript: ENST00000398594
  gene symbol: PCDHGB7
  hgvsc: ENST00000398594.2:c.2415+1425G>T
  variant of: http://identifiers.org/hgnc/8714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204956
  ensembl protein: ENSP00000431083
  ensembl transcript: ENST00000517417
  gene symbol: PCDHGA1
  hgvsc: ENST00000517417.1:c.2422-73108G>T
  variant of: http://identifiers.org/hgnc/8696
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253537
  ensembl protein: ENSP00000430024
  ensembl transcript: ENST00000518325
  gene symbol: PCDHGA7
  hgvsc: ENST00000518325.1:c.2424+36376G>T
  variant of: http://identifiers.org/hgnc/8705
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000428333
  ensembl transcript: ENST00000518882
  gene symbol: PCDHGA11
  hgvsc: ENST00000518882.1:c.472G>T
  hgvsp: ENSP00000428333.1:p.Ala158Ser
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253485
  ensembl protein: ENSP00000429834
  ensembl transcript: ENST00000518069
  gene symbol: PCDHGA5
  hgvsc: ENST00000518069.1:c.2421+54948G>T
  variant of: http://identifiers.org/hgnc/8703
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261934
  ensembl protein: ENSP00000460274
  ensembl transcript: ENST00000573521
  gene symbol: PCDHGA9
  hgvsc: ENST00000573521.1:c.2424+16323G>T
  variant of: http://identifiers.org/hgnc/8707
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081853
  ensembl protein: ENSP00000378077
  ensembl transcript: ENST00000394576
  gene symbol: PCDHGA2
  hgvsc: ENST00000394576.2:c.2425-73108G>T
  variant of: http://identifiers.org/hgnc/8700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253305
  ensembl protein: ENSP00000428603
  ensembl transcript: ENST00000520790
  gene symbol: PCDHGB6
  hgvsc: ENST00000520790.1:c.2418+11079G>T
  variant of: http://identifiers.org/hgnc/8713
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254221
  ensembl protein: ENSP00000429273
  ensembl transcript: ENST00000523390
  gene symbol: PCDHGB1
  hgvsc: ENST00000523390.1:c.2409+69030G>T
  variant of: http://identifiers.org/hgnc/8708
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000381589
  ensembl transcript: ENST00000398587
  gene symbol: PCDHGA11
  hgvsc: ENST00000398587.2:c.472G>T
  hgvsp: ENSP00000381589.2:p.Ala158Ser
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253953
  ensembl protein: ENSP00000428288
  ensembl transcript: ENST00000519479
  gene symbol: PCDHGB4
  hgvsc: ENST00000519479.1:c.2397+31418G>T
  variant of: http://identifiers.org/hgnc/8711
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253846
  ensembl protein: ENSP00000381611
  ensembl transcript: ENST00000398610
  gene symbol: PCDHGA10
  hgvsc: ENST00000398610.2:c.2436+6088G>T
  variant of: http://identifiers.org/hgnc/8697
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32192
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2793
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2078
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala158Ser
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum

5-140801267-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140801267
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140801267
    reference: chr 5
allele count: 1
allele frequency: 8.356871855726965e-6
allele num: 119662
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254221
  ensembl protein: ENSP00000429273
  ensembl transcript: ENST00000523390
  gene symbol: PCDHGB1
  hgvsc: ENST00000523390.1:c.2409+69031C>T
  variant of: http://identifiers.org/hgnc/8708
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253846
  ensembl protein: ENSP00000381611
  ensembl transcript: ENST00000398610
  gene symbol: PCDHGA10
  hgvsc: ENST00000398610.2:c.2436+6089C>T
  variant of: http://identifiers.org/hgnc/8697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081853
  ensembl protein: ENSP00000378077
  ensembl transcript: ENST00000394576
  gene symbol: PCDHGA2
  hgvsc: ENST00000394576.2:c.2425-73107C>T
  variant of: http://identifiers.org/hgnc/8700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254122
  ensembl protein: ENSP00000381594
  ensembl transcript: ENST00000398594
  gene symbol: PCDHGB7
  hgvsc: ENST00000398594.2:c.2415+1426C>T
  variant of: http://identifiers.org/hgnc/8714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253731
  ensembl protein: ENSP00000429601
  ensembl transcript: ENST00000517434
  gene symbol: PCDHGA6
  hgvsc: ENST00000517434.1:c.2424+45193C>T
  variant of: http://identifiers.org/hgnc/8704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000428333
  ensembl transcript: ENST00000518882
  gene symbol: PCDHGA11
  hgvsc: ENST00000518882.1:c.473C>T
  hgvsp: ENSP00000428333.1:p.Ala158Val
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204956
  ensembl protein: ENSP00000431083
  ensembl transcript: ENST00000517417
  gene symbol: PCDHGA1
  hgvsc: ENST00000517417.1:c.2422-73107C>T
  variant of: http://identifiers.org/hgnc/8696
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254245
  ensembl protein: ENSP00000253812
  ensembl transcript: ENST00000253812
  gene symbol: PCDHGA3
  hgvsc: ENST00000253812.6:c.2425-73107C>T
  variant of: http://identifiers.org/hgnc/8701
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000381589
  ensembl transcript: ENST00000398587
  gene symbol: PCDHGA11
  hgvsc: ENST00000398587.2:c.473C>T
  hgvsp: ENSP00000381589.2:p.Ala158Val
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253537
  ensembl protein: ENSP00000430024
  ensembl transcript: ENST00000518325
  gene symbol: PCDHGA7
  hgvsc: ENST00000518325.1:c.2424+36377C>T
  variant of: http://identifiers.org/hgnc/8705
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253767
  ensembl protein: ENSP00000381605
  ensembl transcript: ENST00000398604
  gene symbol: PCDHGA8
  hgvsc: ENST00000398604.2:c.2424+26463C>T
  variant of: http://identifiers.org/hgnc/8706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253953
  ensembl protein: ENSP00000428288
  ensembl transcript: ENST00000519479
  gene symbol: PCDHGB4
  hgvsc: ENST00000519479.1:c.2397+31419C>T
  variant of: http://identifiers.org/hgnc/8711
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262209
  ensembl protein: ENSP00000461862
  ensembl transcript: ENST00000576222
  gene symbol: PCDHGB3
  hgvsc: ENST00000576222.1:c.2415+48891C>T
  variant of: http://identifiers.org/hgnc/8710
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253485
  ensembl protein: ENSP00000429834
  ensembl transcript: ENST00000518069
  gene symbol: PCDHGA5
  hgvsc: ENST00000518069.1:c.2421+54949C>T
  variant of: http://identifiers.org/hgnc/8703
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253305
  ensembl protein: ENSP00000428603
  ensembl transcript: ENST00000520790
  gene symbol: PCDHGB6
  hgvsc: ENST00000520790.1:c.2418+11080C>T
  variant of: http://identifiers.org/hgnc/8713
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261934
  ensembl protein: ENSP00000460274
  ensembl transcript: ENST00000573521
  gene symbol: PCDHGA9
  hgvsc: ENST00000573521.1:c.2424+16324C>T
  variant of: http://identifiers.org/hgnc/8707
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262576
  ensembl protein: ENSP00000458570
  ensembl transcript: ENST00000571252
  gene symbol: PCDHGA4
  hgvsc: ENST00000571252.1:c.2421+64079C>T
  variant of: http://identifiers.org/hgnc/8702
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253910
  ensembl protein: ENSP00000429018
  ensembl transcript: ENST00000522605
  gene symbol: PCDHGB2
  hgvsc: ENST00000522605.1:c.2421+59144C>T
  variant of: http://identifiers.org/hgnc/8709
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2680
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala158Val
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: African
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum

5-140801277-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140801277
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140801277
    reference: chr 5
allele count: 1
allele frequency: 8.348081610845828e-6
allele num: 119788
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262209
  ensembl protein: ENSP00000461862
  ensembl transcript: ENST00000576222
  gene symbol: PCDHGB3
  hgvsc: ENST00000576222.1:c.2415+48901A>G
  variant of: http://identifiers.org/hgnc/8710
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081853
  ensembl protein: ENSP00000378077
  ensembl transcript: ENST00000394576
  gene symbol: PCDHGA2
  hgvsc: ENST00000394576.2:c.2425-73097A>G
  variant of: http://identifiers.org/hgnc/8700
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000428333
  ensembl transcript: ENST00000518882
  gene symbol: PCDHGA11
  hgvsc: ENST00000518882.1:c.483A>G
  hgvsp: ENST00000518882.1:c.483A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254122
  ensembl protein: ENSP00000381594
  ensembl transcript: ENST00000398594
  gene symbol: PCDHGB7
  hgvsc: ENST00000398594.2:c.2415+1436A>G
  variant of: http://identifiers.org/hgnc/8714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253846
  ensembl protein: ENSP00000381611
  ensembl transcript: ENST00000398610
  gene symbol: PCDHGA10
  hgvsc: ENST00000398610.2:c.2436+6099A>G
  variant of: http://identifiers.org/hgnc/8697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253537
  ensembl protein: ENSP00000430024
  ensembl transcript: ENST00000518325
  gene symbol: PCDHGA7
  hgvsc: ENST00000518325.1:c.2424+36387A>G
  variant of: http://identifiers.org/hgnc/8705
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262576
  ensembl protein: ENSP00000458570
  ensembl transcript: ENST00000571252
  gene symbol: PCDHGA4
  hgvsc: ENST00000571252.1:c.2421+64089A>G
  variant of: http://identifiers.org/hgnc/8702
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253731
  ensembl protein: ENSP00000429601
  ensembl transcript: ENST00000517434
  gene symbol: PCDHGA6
  hgvsc: ENST00000517434.1:c.2424+45203A>G
  variant of: http://identifiers.org/hgnc/8704
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253910
  ensembl protein: ENSP00000429018
  ensembl transcript: ENST00000522605
  gene symbol: PCDHGB2
  hgvsc: ENST00000522605.1:c.2421+59154A>G
  variant of: http://identifiers.org/hgnc/8709
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254221
  ensembl protein: ENSP00000429273
  ensembl transcript: ENST00000523390
  gene symbol: PCDHGB1
  hgvsc: ENST00000523390.1:c.2409+69041A>G
  variant of: http://identifiers.org/hgnc/8708
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253953
  ensembl protein: ENSP00000428288
  ensembl transcript: ENST00000519479
  gene symbol: PCDHGB4
  hgvsc: ENST00000519479.1:c.2397+31429A>G
  variant of: http://identifiers.org/hgnc/8711
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000381589
  ensembl transcript: ENST00000398587
  gene symbol: PCDHGA11
  hgvsc: ENST00000398587.2:c.483A>G
  hgvsp: ENST00000398587.2:c.483A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261934
  ensembl protein: ENSP00000460274
  ensembl transcript: ENST00000573521
  gene symbol: PCDHGA9
  hgvsc: ENST00000573521.1:c.2424+16334A>G
  variant of: http://identifiers.org/hgnc/8707
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204956
  ensembl protein: ENSP00000431083
  ensembl transcript: ENST00000517417
  gene symbol: PCDHGA1
  hgvsc: ENST00000517417.1:c.2422-73097A>G
  variant of: http://identifiers.org/hgnc/8696
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254245
  ensembl protein: ENSP00000253812
  ensembl transcript: ENST00000253812
  gene symbol: PCDHGA3
  hgvsc: ENST00000253812.6:c.2425-73097A>G
  variant of: http://identifiers.org/hgnc/8701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253767
  ensembl protein: ENSP00000381605
  ensembl transcript: ENST00000398604
  gene symbol: PCDHGA8
  hgvsc: ENST00000398604.2:c.2424+26473A>G
  variant of: http://identifiers.org/hgnc/8706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253485
  ensembl protein: ENSP00000429834
  ensembl transcript: ENST00000518069
  gene symbol: PCDHGA5
  hgvsc: ENST00000518069.1:c.2421+54959A>G
  variant of: http://identifiers.org/hgnc/8703
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253305
  ensembl protein: ENSP00000428603
  ensembl transcript: ENST00000520790
  gene symbol: PCDHGB6
  hgvsc: ENST00000520790.1:c.2418+11090A>G
  variant of: http://identifiers.org/hgnc/8713
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1088
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1633
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro161Pro
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD

5-140801281-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140801281
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140801281
    reference: chr 5
allele count: 1
allele frequency: 8.346548702111677e-6
allele num: 119810
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081853
  ensembl protein: ENSP00000378077
  ensembl transcript: ENST00000394576
  gene symbol: PCDHGA2
  hgvsc: ENST00000394576.2:c.2425-73093G>A
  variant of: http://identifiers.org/hgnc/8700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000428333
  ensembl transcript: ENST00000518882
  gene symbol: PCDHGA11
  hgvsc: ENST00000518882.1:c.487G>A
  hgvsp: ENSP00000428333.1:p.Val163Met
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000381589
  ensembl transcript: ENST00000398587
  gene symbol: PCDHGA11
  hgvsc: ENST00000398587.2:c.487G>A
  hgvsp: ENSP00000381589.2:p.Val163Met
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253731
  ensembl protein: ENSP00000429601
  ensembl transcript: ENST00000517434
  gene symbol: PCDHGA6
  hgvsc: ENST00000517434.1:c.2424+45207G>A
  variant of: http://identifiers.org/hgnc/8704
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253537
  ensembl protein: ENSP00000430024
  ensembl transcript: ENST00000518325
  gene symbol: PCDHGA7
  hgvsc: ENST00000518325.1:c.2424+36391G>A
  variant of: http://identifiers.org/hgnc/8705
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261934
  ensembl protein: ENSP00000460274
  ensembl transcript: ENST00000573521
  gene symbol: PCDHGA9
  hgvsc: ENST00000573521.1:c.2424+16338G>A
  variant of: http://identifiers.org/hgnc/8707
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253846
  ensembl protein: ENSP00000381611
  ensembl transcript: ENST00000398610
  gene symbol: PCDHGA10
  hgvsc: ENST00000398610.2:c.2436+6103G>A
  variant of: http://identifiers.org/hgnc/8697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254122
  ensembl protein: ENSP00000381594
  ensembl transcript: ENST00000398594
  gene symbol: PCDHGB7
  hgvsc: ENST00000398594.2:c.2415+1440G>A
  variant of: http://identifiers.org/hgnc/8714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253767
  ensembl protein: ENSP00000381605
  ensembl transcript: ENST00000398604
  gene symbol: PCDHGA8
  hgvsc: ENST00000398604.2:c.2424+26477G>A
  variant of: http://identifiers.org/hgnc/8706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262209
  ensembl protein: ENSP00000461862
  ensembl transcript: ENST00000576222
  gene symbol: PCDHGB3
  hgvsc: ENST00000576222.1:c.2415+48905G>A
  variant of: http://identifiers.org/hgnc/8710
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253305
  ensembl protein: ENSP00000428603
  ensembl transcript: ENST00000520790
  gene symbol: PCDHGB6
  hgvsc: ENST00000520790.1:c.2418+11094G>A
  variant of: http://identifiers.org/hgnc/8713
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262576
  ensembl protein: ENSP00000458570
  ensembl transcript: ENST00000571252
  gene symbol: PCDHGA4
  hgvsc: ENST00000571252.1:c.2421+64093G>A
  variant of: http://identifiers.org/hgnc/8702
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204956
  ensembl protein: ENSP00000431083
  ensembl transcript: ENST00000517417
  gene symbol: PCDHGA1
  hgvsc: ENST00000517417.1:c.2422-73093G>A
  variant of: http://identifiers.org/hgnc/8696
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253485
  ensembl protein: ENSP00000429834
  ensembl transcript: ENST00000518069
  gene symbol: PCDHGA5
  hgvsc: ENST00000518069.1:c.2421+54963G>A
  variant of: http://identifiers.org/hgnc/8703
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253910
  ensembl protein: ENSP00000429018
  ensembl transcript: ENST00000522605
  gene symbol: PCDHGB2
  hgvsc: ENST00000522605.1:c.2421+59158G>A
  variant of: http://identifiers.org/hgnc/8709
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253953
  ensembl protein: ENSP00000428288
  ensembl transcript: ENST00000519479
  gene symbol: PCDHGB4
  hgvsc: ENST00000519479.1:c.2397+31433G>A
  variant of: http://identifiers.org/hgnc/8711
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254221
  ensembl protein: ENSP00000429273
  ensembl transcript: ENST00000523390
  gene symbol: PCDHGB1
  hgvsc: ENST00000523390.1:c.2409+69045G>A
  variant of: http://identifiers.org/hgnc/8708
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254245
  ensembl protein: ENSP00000253812
  ensembl transcript: ENST00000253812
  gene symbol: PCDHGA3
  hgvsc: ENST00000253812.6:c.2425-73093G>A
  variant of: http://identifiers.org/hgnc/8701
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val163Met
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
population: Other
population: Latino
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: DP

5-140801282-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140801282
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140801282
    reference: chr 5
allele count: 1
allele frequency: 8.346130733791815e-6
allele num: 119816
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081853
  ensembl protein: ENSP00000378077
  ensembl transcript: ENST00000394576
  gene symbol: PCDHGA2
  hgvsc: ENST00000394576.2:c.2425-73092T>G
  variant of: http://identifiers.org/hgnc/8700
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000381589
  ensembl transcript: ENST00000398587
  gene symbol: PCDHGA11
  hgvsc: ENST00000398587.2:c.488T>G
  hgvsp: ENSP00000381589.2:p.Val163Gly
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261934
  ensembl protein: ENSP00000460274
  ensembl transcript: ENST00000573521
  gene symbol: PCDHGA9
  hgvsc: ENST00000573521.1:c.2424+16339T>G
  variant of: http://identifiers.org/hgnc/8707
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253846
  ensembl protein: ENSP00000381611
  ensembl transcript: ENST00000398610
  gene symbol: PCDHGA10
  hgvsc: ENST00000398610.2:c.2436+6104T>G
  variant of: http://identifiers.org/hgnc/8697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253953
  ensembl protein: ENSP00000428288
  ensembl transcript: ENST00000519479
  gene symbol: PCDHGB4
  hgvsc: ENST00000519479.1:c.2397+31434T>G
  variant of: http://identifiers.org/hgnc/8711
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253485
  ensembl protein: ENSP00000429834
  ensembl transcript: ENST00000518069
  gene symbol: PCDHGA5
  hgvsc: ENST00000518069.1:c.2421+54964T>G
  variant of: http://identifiers.org/hgnc/8703
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262209
  ensembl protein: ENSP00000461862
  ensembl transcript: ENST00000576222
  gene symbol: PCDHGB3
  hgvsc: ENST00000576222.1:c.2415+48906T>G
  variant of: http://identifiers.org/hgnc/8710
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204956
  ensembl protein: ENSP00000431083
  ensembl transcript: ENST00000517417
  gene symbol: PCDHGA1
  hgvsc: ENST00000517417.1:c.2422-73092T>G
  variant of: http://identifiers.org/hgnc/8696
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000428333
  ensembl transcript: ENST00000518882
  gene symbol: PCDHGA11
  hgvsc: ENST00000518882.1:c.488T>G
  hgvsp: ENSP00000428333.1:p.Val163Gly
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253767
  ensembl protein: ENSP00000381605
  ensembl transcript: ENST00000398604
  gene symbol: PCDHGA8
  hgvsc: ENST00000398604.2:c.2424+26478T>G
  variant of: http://identifiers.org/hgnc/8706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253731
  ensembl protein: ENSP00000429601
  ensembl transcript: ENST00000517434
  gene symbol: PCDHGA6
  hgvsc: ENST00000517434.1:c.2424+45208T>G
  variant of: http://identifiers.org/hgnc/8704
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253305
  ensembl protein: ENSP00000428603
  ensembl transcript: ENST00000520790
  gene symbol: PCDHGB6
  hgvsc: ENST00000520790.1:c.2418+11095T>G
  variant of: http://identifiers.org/hgnc/8713
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254221
  ensembl protein: ENSP00000429273
  ensembl transcript: ENST00000523390
  gene symbol: PCDHGB1
  hgvsc: ENST00000523390.1:c.2409+69046T>G
  variant of: http://identifiers.org/hgnc/8708
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253537
  ensembl protein: ENSP00000430024
  ensembl transcript: ENST00000518325
  gene symbol: PCDHGA7
  hgvsc: ENST00000518325.1:c.2424+36392T>G
  variant of: http://identifiers.org/hgnc/8705
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254245
  ensembl protein: ENSP00000253812
  ensembl transcript: ENST00000253812
  gene symbol: PCDHGA3
  hgvsc: ENST00000253812.6:c.2425-73092T>G
  variant of: http://identifiers.org/hgnc/8701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262576
  ensembl protein: ENSP00000458570
  ensembl transcript: ENST00000571252
  gene symbol: PCDHGA4
  hgvsc: ENST00000571252.1:c.2421+64094T>G
  variant of: http://identifiers.org/hgnc/8702
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253910
  ensembl protein: ENSP00000429018
  ensembl transcript: ENST00000522605
  gene symbol: PCDHGB2
  hgvsc: ENST00000522605.1:c.2421+59159T>G
  variant of: http://identifiers.org/hgnc/8709
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254122
  ensembl protein: ENSP00000381594
  ensembl transcript: ENST00000398594
  gene symbol: PCDHGB7
  hgvsc: ENST00000398594.2:c.2415+1441T>G
  variant of: http://identifiers.org/hgnc/8714
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 32629
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1507
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2039
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4012
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val163Gly
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: T
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: FS
site quality: MQRankSum

5-140801285-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140801285
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140801285
    reference: chr 5
allele count: 1
allele frequency: 8.345016356232058e-6
allele num: 119832
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254221
  ensembl protein: ENSP00000429273
  ensembl transcript: ENST00000523390
  gene symbol: PCDHGB1
  hgvsc: ENST00000523390.1:c.2409+69049G>C
  variant of: http://identifiers.org/hgnc/8708
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253910
  ensembl protein: ENSP00000429018
  ensembl transcript: ENST00000522605
  gene symbol: PCDHGB2
  hgvsc: ENST00000522605.1:c.2421+59162G>C
  variant of: http://identifiers.org/hgnc/8709
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253731
  ensembl protein: ENSP00000429601
  ensembl transcript: ENST00000517434
  gene symbol: PCDHGA6
  hgvsc: ENST00000517434.1:c.2424+45211G>C
  variant of: http://identifiers.org/hgnc/8704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000428333
  ensembl transcript: ENST00000518882
  gene symbol: PCDHGA11
  hgvsc: ENST00000518882.1:c.491G>C
  hgvsp: ENSP00000428333.1:p.Gly164Ala
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253846
  ensembl protein: ENSP00000381611
  ensembl transcript: ENST00000398610
  gene symbol: PCDHGA10
  hgvsc: ENST00000398610.2:c.2436+6107G>C
  variant of: http://identifiers.org/hgnc/8697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253953
  ensembl protein: ENSP00000428288
  ensembl transcript: ENST00000519479
  gene symbol: PCDHGB4
  hgvsc: ENST00000519479.1:c.2397+31437G>C
  variant of: http://identifiers.org/hgnc/8711
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204956
  ensembl protein: ENSP00000431083
  ensembl transcript: ENST00000517417
  gene symbol: PCDHGA1
  hgvsc: ENST00000517417.1:c.2422-73089G>C
  variant of: http://identifiers.org/hgnc/8696
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253305
  ensembl protein: ENSP00000428603
  ensembl transcript: ENST00000520790
  gene symbol: PCDHGB6
  hgvsc: ENST00000520790.1:c.2418+11098G>C
  variant of: http://identifiers.org/hgnc/8713
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253767
  ensembl protein: ENSP00000381605
  ensembl transcript: ENST00000398604
  gene symbol: PCDHGA8
  hgvsc: ENST00000398604.2:c.2424+26481G>C
  variant of: http://identifiers.org/hgnc/8706
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000381589
  ensembl transcript: ENST00000398587
  gene symbol: PCDHGA11
  hgvsc: ENST00000398587.2:c.491G>C
  hgvsp: ENSP00000381589.2:p.Gly164Ala
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253537
  ensembl protein: ENSP00000430024
  ensembl transcript: ENST00000518325
  gene symbol: PCDHGA7
  hgvsc: ENST00000518325.1:c.2424+36395G>C
  variant of: http://identifiers.org/hgnc/8705
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261934
  ensembl protein: ENSP00000460274
  ensembl transcript: ENST00000573521
  gene symbol: PCDHGA9
  hgvsc: ENST00000573521.1:c.2424+16342G>C
  variant of: http://identifiers.org/hgnc/8707
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254122
  ensembl protein: ENSP00000381594
  ensembl transcript: ENST00000398594
  gene symbol: PCDHGB7
  hgvsc: ENST00000398594.2:c.2415+1444G>C
  variant of: http://identifiers.org/hgnc/8714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254245
  ensembl protein: ENSP00000253812
  ensembl transcript: ENST00000253812
  gene symbol: PCDHGA3
  hgvsc: ENST00000253812.6:c.2425-73089G>C
  variant of: http://identifiers.org/hgnc/8701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081853
  ensembl protein: ENSP00000378077
  ensembl transcript: ENST00000394576
  gene symbol: PCDHGA2
  hgvsc: ENST00000394576.2:c.2425-73089G>C
  variant of: http://identifiers.org/hgnc/8700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262576
  ensembl protein: ENSP00000458570
  ensembl transcript: ENST00000571252
  gene symbol: PCDHGA4
  hgvsc: ENST00000571252.1:c.2421+64097G>C
  variant of: http://identifiers.org/hgnc/8702
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262209
  ensembl protein: ENSP00000461862
  ensembl transcript: ENST00000576222
  gene symbol: PCDHGB3
  hgvsc: ENST00000576222.1:c.2415+48909G>C
  variant of: http://identifiers.org/hgnc/8710
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253485
  ensembl protein: ENSP00000429834
  ensembl transcript: ENST00000518069
  gene symbol: PCDHGA5
  hgvsc: ENST00000518069.1:c.2421+54967G>C
  variant of: http://identifiers.org/hgnc/8703
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly164Ala
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP

5-140801287-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140801287
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140801287
    reference: chr 5
allele count: 1
allele frequency: 8.352125615969264e-6
allele num: 119730
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254245
  ensembl protein: ENSP00000253812
  ensembl transcript: ENST00000253812
  gene symbol: PCDHGA3
  hgvsc: ENST00000253812.6:c.2425-73087G>A
  variant of: http://identifiers.org/hgnc/8701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204956
  ensembl protein: ENSP00000431083
  ensembl transcript: ENST00000517417
  gene symbol: PCDHGA1
  hgvsc: ENST00000517417.1:c.2422-73087G>A
  variant of: http://identifiers.org/hgnc/8696
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254122
  ensembl protein: ENSP00000381594
  ensembl transcript: ENST00000398594
  gene symbol: PCDHGB7
  hgvsc: ENST00000398594.2:c.2415+1446G>A
  variant of: http://identifiers.org/hgnc/8714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253537
  ensembl protein: ENSP00000430024
  ensembl transcript: ENST00000518325
  gene symbol: PCDHGA7
  hgvsc: ENST00000518325.1:c.2424+36397G>A
  variant of: http://identifiers.org/hgnc/8705
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081853
  ensembl protein: ENSP00000378077
  ensembl transcript: ENST00000394576
  gene symbol: PCDHGA2
  hgvsc: ENST00000394576.2:c.2425-73087G>A
  variant of: http://identifiers.org/hgnc/8700
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000381589
  ensembl transcript: ENST00000398587
  gene symbol: PCDHGA11
  hgvsc: ENST00000398587.2:c.493G>A
  hgvsp: ENSP00000381589.2:p.Val165Met
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261934
  ensembl protein: ENSP00000460274
  ensembl transcript: ENST00000573521
  gene symbol: PCDHGA9
  hgvsc: ENST00000573521.1:c.2424+16344G>A
  variant of: http://identifiers.org/hgnc/8707
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253846
  ensembl protein: ENSP00000381611
  ensembl transcript: ENST00000398610
  gene symbol: PCDHGA10
  hgvsc: ENST00000398610.2:c.2436+6109G>A
  variant of: http://identifiers.org/hgnc/8697
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000428333
  ensembl transcript: ENST00000518882
  gene symbol: PCDHGA11
  hgvsc: ENST00000518882.1:c.493G>A
  hgvsp: ENSP00000428333.1:p.Val165Met
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253953
  ensembl protein: ENSP00000428288
  ensembl transcript: ENST00000519479
  gene symbol: PCDHGB4
  hgvsc: ENST00000519479.1:c.2397+31439G>A
  variant of: http://identifiers.org/hgnc/8711
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254221
  ensembl protein: ENSP00000429273
  ensembl transcript: ENST00000523390
  gene symbol: PCDHGB1
  hgvsc: ENST00000523390.1:c.2409+69051G>A
  variant of: http://identifiers.org/hgnc/8708
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253485
  ensembl protein: ENSP00000429834
  ensembl transcript: ENST00000518069
  gene symbol: PCDHGA5
  hgvsc: ENST00000518069.1:c.2421+54969G>A
  variant of: http://identifiers.org/hgnc/8703
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253731
  ensembl protein: ENSP00000429601
  ensembl transcript: ENST00000517434
  gene symbol: PCDHGA6
  hgvsc: ENST00000517434.1:c.2424+45213G>A
  variant of: http://identifiers.org/hgnc/8704
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253910
  ensembl protein: ENSP00000429018
  ensembl transcript: ENST00000522605
  gene symbol: PCDHGB2
  hgvsc: ENST00000522605.1:c.2421+59164G>A
  variant of: http://identifiers.org/hgnc/8709
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253305
  ensembl protein: ENSP00000428603
  ensembl transcript: ENST00000520790
  gene symbol: PCDHGB6
  hgvsc: ENST00000520790.1:c.2418+11100G>A
  variant of: http://identifiers.org/hgnc/8713
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262209
  ensembl protein: ENSP00000461862
  ensembl transcript: ENST00000576222
  gene symbol: PCDHGB3
  hgvsc: ENST00000576222.1:c.2415+48911G>A
  variant of: http://identifiers.org/hgnc/8710
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262576
  ensembl protein: ENSP00000458570
  ensembl transcript: ENST00000571252
  gene symbol: PCDHGA4
  hgvsc: ENST00000571252.1:c.2421+64099G>A
  variant of: http://identifiers.org/hgnc/8702
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253767
  ensembl protein: ENSP00000381605
  ensembl transcript: ENST00000398604
  gene symbol: PCDHGA8
  hgvsc: ENST00000398604.2:c.2424+26483G>A
  variant of: http://identifiers.org/hgnc/8706
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4244
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1934
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val165Met
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
population: African
reference allele: G
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: FS

5-140801291-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140801291
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140801291
    reference: chr 5
allele count: 54
allele frequency: 4.504053648283455e-4
allele num: 119892
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262576
  ensembl protein: ENSP00000458570
  ensembl transcript: ENST00000571252
  gene symbol: PCDHGA4
  hgvsc: ENST00000571252.1:c.2421+64103A>G
  variant of: http://identifiers.org/hgnc/8702
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000381589
  ensembl transcript: ENST00000398587
  gene symbol: PCDHGA11
  hgvsc: ENST00000398587.2:c.497A>G
  hgvsp: ENSP00000381589.2:p.Asn166Ser
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204956
  ensembl protein: ENSP00000431083
  ensembl transcript: ENST00000517417
  gene symbol: PCDHGA1
  hgvsc: ENST00000517417.1:c.2422-73083A>G
  variant of: http://identifiers.org/hgnc/8696
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254221
  ensembl protein: ENSP00000429273
  ensembl transcript: ENST00000523390
  gene symbol: PCDHGB1
  hgvsc: ENST00000523390.1:c.2409+69055A>G
  variant of: http://identifiers.org/hgnc/8708
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253731
  ensembl protein: ENSP00000429601
  ensembl transcript: ENST00000517434
  gene symbol: PCDHGA6
  hgvsc: ENST00000517434.1:c.2424+45217A>G
  variant of: http://identifiers.org/hgnc/8704
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254122
  ensembl protein: ENSP00000381594
  ensembl transcript: ENST00000398594
  gene symbol: PCDHGB7
  hgvsc: ENST00000398594.2:c.2415+1450A>G
  variant of: http://identifiers.org/hgnc/8714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253537
  ensembl protein: ENSP00000430024
  ensembl transcript: ENST00000518325
  gene symbol: PCDHGA7
  hgvsc: ENST00000518325.1:c.2424+36401A>G
  variant of: http://identifiers.org/hgnc/8705
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253485
  ensembl protein: ENSP00000429834
  ensembl transcript: ENST00000518069
  gene symbol: PCDHGA5
  hgvsc: ENST00000518069.1:c.2421+54973A>G
  variant of: http://identifiers.org/hgnc/8703
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253953
  ensembl protein: ENSP00000428288
  ensembl transcript: ENST00000519479
  gene symbol: PCDHGB4
  hgvsc: ENST00000519479.1:c.2397+31443A>G
  variant of: http://identifiers.org/hgnc/8711
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253846
  ensembl protein: ENSP00000381611
  ensembl transcript: ENST00000398610
  gene symbol: PCDHGA10
  hgvsc: ENST00000398610.2:c.2436+6113A>G
  variant of: http://identifiers.org/hgnc/8697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253305
  ensembl protein: ENSP00000428603
  ensembl transcript: ENST00000520790
  gene symbol: PCDHGB6
  hgvsc: ENST00000520790.1:c.2418+11104A>G
  variant of: http://identifiers.org/hgnc/8713
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262209
  ensembl protein: ENSP00000461862
  ensembl transcript: ENST00000576222
  gene symbol: PCDHGB3
  hgvsc: ENST00000576222.1:c.2415+48915A>G
  variant of: http://identifiers.org/hgnc/8710
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253767
  ensembl protein: ENSP00000381605
  ensembl transcript: ENST00000398604
  gene symbol: PCDHGA8
  hgvsc: ENST00000398604.2:c.2424+26487A>G
  variant of: http://identifiers.org/hgnc/8706
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000428333
  ensembl transcript: ENST00000518882
  gene symbol: PCDHGA11
  hgvsc: ENST00000518882.1:c.497A>G
  hgvsp: ENSP00000428333.1:p.Asn166Ser
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081853
  ensembl protein: ENSP00000378077
  ensembl transcript: ENST00000394576
  gene symbol: PCDHGA2
  hgvsc: ENST00000394576.2:c.2425-73083A>G
  variant of: http://identifiers.org/hgnc/8700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254245
  ensembl protein: ENSP00000253812
  ensembl transcript: ENST00000253812
  gene symbol: PCDHGA3
  hgvsc: ENST00000253812.6:c.2425-73083A>G
  variant of: http://identifiers.org/hgnc/8701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253910
  ensembl protein: ENSP00000429018
  ensembl transcript: ENST00000522605
  gene symbol: PCDHGB2
  hgvsc: ENST00000522605.1:c.2421+59168A>G
  variant of: http://identifiers.org/hgnc/8709
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261934
  ensembl protein: ENSP00000460274
  ensembl transcript: ENST00000573521
  gene symbol: PCDHGA9
  hgvsc: ENST00000573521.1:c.2424+16348A>G
  variant of: http://identifiers.org/hgnc/8707
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 32299
  bin: 2.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 4201
  bin: 3.25e1
  variant carriers: 8
genotype quality: GenotypeQuality
hgvs: p.Asn166Ser
num of homozygotes: 1
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
reference allele: A
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: QD

5-140801294-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140801294
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140801294
    reference: chr 5
allele count: 1
allele frequency: 8.343484572897024e-6
allele num: 119854
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253910
  ensembl protein: ENSP00000429018
  ensembl transcript: ENST00000522605
  gene symbol: PCDHGB2
  hgvsc: ENST00000522605.1:c.2421+59171C>G
  variant of: http://identifiers.org/hgnc/8709
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262209
  ensembl protein: ENSP00000461862
  ensembl transcript: ENST00000576222
  gene symbol: PCDHGB3
  hgvsc: ENST00000576222.1:c.2415+48918C>G
  variant of: http://identifiers.org/hgnc/8710
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204956
  ensembl protein: ENSP00000431083
  ensembl transcript: ENST00000517417
  gene symbol: PCDHGA1
  hgvsc: ENST00000517417.1:c.2422-73080C>G
  variant of: http://identifiers.org/hgnc/8696
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253731
  ensembl protein: ENSP00000429601
  ensembl transcript: ENST00000517434
  gene symbol: PCDHGA6
  hgvsc: ENST00000517434.1:c.2424+45220C>G
  variant of: http://identifiers.org/hgnc/8704
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261934
  ensembl protein: ENSP00000460274
  ensembl transcript: ENST00000573521
  gene symbol: PCDHGA9
  hgvsc: ENST00000573521.1:c.2424+16351C>G
  variant of: http://identifiers.org/hgnc/8707
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000381589
  ensembl transcript: ENST00000398587
  gene symbol: PCDHGA11
  hgvsc: ENST00000398587.2:c.500C>G
  hgvsp: ENSP00000381589.2:p.Ser167Cys
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253846
  ensembl protein: ENSP00000381611
  ensembl transcript: ENST00000398610
  gene symbol: PCDHGA10
  hgvsc: ENST00000398610.2:c.2436+6116C>G
  variant of: http://identifiers.org/hgnc/8697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254221
  ensembl protein: ENSP00000429273
  ensembl transcript: ENST00000523390
  gene symbol: PCDHGB1
  hgvsc: ENST00000523390.1:c.2409+69058C>G
  variant of: http://identifiers.org/hgnc/8708
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000428333
  ensembl transcript: ENST00000518882
  gene symbol: PCDHGA11
  hgvsc: ENST00000518882.1:c.500C>G
  hgvsp: ENSP00000428333.1:p.Ser167Cys
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253767
  ensembl protein: ENSP00000381605
  ensembl transcript: ENST00000398604
  gene symbol: PCDHGA8
  hgvsc: ENST00000398604.2:c.2424+26490C>G
  variant of: http://identifiers.org/hgnc/8706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081853
  ensembl protein: ENSP00000378077
  ensembl transcript: ENST00000394576
  gene symbol: PCDHGA2
  hgvsc: ENST00000394576.2:c.2425-73080C>G
  variant of: http://identifiers.org/hgnc/8700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254245
  ensembl protein: ENSP00000253812
  ensembl transcript: ENST00000253812
  gene symbol: PCDHGA3
  hgvsc: ENST00000253812.6:c.2425-73080C>G
  variant of: http://identifiers.org/hgnc/8701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253537
  ensembl protein: ENSP00000430024
  ensembl transcript: ENST00000518325
  gene symbol: PCDHGA7
  hgvsc: ENST00000518325.1:c.2424+36404C>G
  variant of: http://identifiers.org/hgnc/8705
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253485
  ensembl protein: ENSP00000429834
  ensembl transcript: ENST00000518069
  gene symbol: PCDHGA5
  hgvsc: ENST00000518069.1:c.2421+54976C>G
  variant of: http://identifiers.org/hgnc/8703
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253953
  ensembl protein: ENSP00000428288
  ensembl transcript: ENST00000519479
  gene symbol: PCDHGB4
  hgvsc: ENST00000519479.1:c.2397+31446C>G
  variant of: http://identifiers.org/hgnc/8711
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253305
  ensembl protein: ENSP00000428603
  ensembl transcript: ENST00000520790
  gene symbol: PCDHGB6
  hgvsc: ENST00000520790.1:c.2418+11107C>G
  variant of: http://identifiers.org/hgnc/8713
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254122
  ensembl protein: ENSP00000381594
  ensembl transcript: ENST00000398594
  gene symbol: PCDHGB7
  hgvsc: ENST00000398594.2:c.2415+1453C>G
  variant of: http://identifiers.org/hgnc/8714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262576
  ensembl protein: ENSP00000458570
  ensembl transcript: ENST00000571252
  gene symbol: PCDHGA4
  hgvsc: ENST00000571252.1:c.2421+64106C>G
  variant of: http://identifiers.org/hgnc/8702
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18005
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser167Cys
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

5-140801294-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140801294
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140801294
    reference: chr 5
allele count: 2
allele frequency: 1.668696914579405e-5
allele num: 119854
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254245
  ensembl protein: ENSP00000253812
  ensembl transcript: ENST00000253812
  gene symbol: PCDHGA3
  hgvsc: ENST00000253812.6:c.2425-73080C>T
  variant of: http://identifiers.org/hgnc/8701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253537
  ensembl protein: ENSP00000430024
  ensembl transcript: ENST00000518325
  gene symbol: PCDHGA7
  hgvsc: ENST00000518325.1:c.2424+36404C>T
  variant of: http://identifiers.org/hgnc/8705
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000381589
  ensembl transcript: ENST00000398587
  gene symbol: PCDHGA11
  hgvsc: ENST00000398587.2:c.500C>T
  hgvsp: ENSP00000381589.2:p.Ser167Phe
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204956
  ensembl protein: ENSP00000431083
  ensembl transcript: ENST00000517417
  gene symbol: PCDHGA1
  hgvsc: ENST00000517417.1:c.2422-73080C>T
  variant of: http://identifiers.org/hgnc/8696
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253485
  ensembl protein: ENSP00000429834
  ensembl transcript: ENST00000518069
  gene symbol: PCDHGA5
  hgvsc: ENST00000518069.1:c.2421+54976C>T
  variant of: http://identifiers.org/hgnc/8703
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253846
  ensembl protein: ENSP00000381611
  ensembl transcript: ENST00000398610
  gene symbol: PCDHGA10
  hgvsc: ENST00000398610.2:c.2436+6116C>T
  variant of: http://identifiers.org/hgnc/8697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253910
  ensembl protein: ENSP00000429018
  ensembl transcript: ENST00000522605
  gene symbol: PCDHGB2
  hgvsc: ENST00000522605.1:c.2421+59171C>T
  variant of: http://identifiers.org/hgnc/8709
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254221
  ensembl protein: ENSP00000429273
  ensembl transcript: ENST00000523390
  gene symbol: PCDHGB1
  hgvsc: ENST00000523390.1:c.2409+69058C>T
  variant of: http://identifiers.org/hgnc/8708
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000428333
  ensembl transcript: ENST00000518882
  gene symbol: PCDHGA11
  hgvsc: ENST00000518882.1:c.500C>T
  hgvsp: ENSP00000428333.1:p.Ser167Phe
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254122
  ensembl protein: ENSP00000381594
  ensembl transcript: ENST00000398594
  gene symbol: PCDHGB7
  hgvsc: ENST00000398594.2:c.2415+1453C>T
  variant of: http://identifiers.org/hgnc/8714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262209
  ensembl protein: ENSP00000461862
  ensembl transcript: ENST00000576222
  gene symbol: PCDHGB3
  hgvsc: ENST00000576222.1:c.2415+48918C>T
  variant of: http://identifiers.org/hgnc/8710
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253305
  ensembl protein: ENSP00000428603
  ensembl transcript: ENST00000520790
  gene symbol: PCDHGB6
  hgvsc: ENST00000520790.1:c.2418+11107C>T
  variant of: http://identifiers.org/hgnc/8713
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253731
  ensembl protein: ENSP00000429601
  ensembl transcript: ENST00000517434
  gene symbol: PCDHGA6
  hgvsc: ENST00000517434.1:c.2424+45220C>T
  variant of: http://identifiers.org/hgnc/8704
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253953
  ensembl protein: ENSP00000428288
  ensembl transcript: ENST00000519479
  gene symbol: PCDHGB4
  hgvsc: ENST00000519479.1:c.2397+31446C>T
  variant of: http://identifiers.org/hgnc/8711
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081853
  ensembl protein: ENSP00000378077
  ensembl transcript: ENST00000394576
  gene symbol: PCDHGA2
  hgvsc: ENST00000394576.2:c.2425-73080C>T
  variant of: http://identifiers.org/hgnc/8700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253767
  ensembl protein: ENSP00000381605
  ensembl transcript: ENST00000398604
  gene symbol: PCDHGA8
  hgvsc: ENST00000398604.2:c.2424+26490C>T
  variant of: http://identifiers.org/hgnc/8706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261934
  ensembl protein: ENSP00000460274
  ensembl transcript: ENST00000573521
  gene symbol: PCDHGA9
  hgvsc: ENST00000573521.1:c.2424+16351C>T
  variant of: http://identifiers.org/hgnc/8707
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262576
  ensembl protein: ENSP00000458570
  ensembl transcript: ENST00000571252
  gene symbol: PCDHGA4
  hgvsc: ENST00000571252.1:c.2421+64106C>T
  variant of: http://identifiers.org/hgnc/8702
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1666
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18005
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser167Phe
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum

5-140801295-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140801295
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140801295
    reference: chr 5
allele count: 1
allele frequency: 8.342370901810295e-6
allele num: 119870
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253537
  ensembl protein: ENSP00000430024
  ensembl transcript: ENST00000518325
  gene symbol: PCDHGA7
  hgvsc: ENST00000518325.1:c.2424+36405C>G
  variant of: http://identifiers.org/hgnc/8705
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262576
  ensembl protein: ENSP00000458570
  ensembl transcript: ENST00000571252
  gene symbol: PCDHGA4
  hgvsc: ENST00000571252.1:c.2421+64107C>G
  variant of: http://identifiers.org/hgnc/8702
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253953
  ensembl protein: ENSP00000428288
  ensembl transcript: ENST00000519479
  gene symbol: PCDHGB4
  hgvsc: ENST00000519479.1:c.2397+31447C>G
  variant of: http://identifiers.org/hgnc/8711
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000381589
  ensembl transcript: ENST00000398587
  gene symbol: PCDHGA11
  hgvsc: ENST00000398587.2:c.501C>G
  hgvsp: ENST00000398587.2:c.501C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254245
  ensembl protein: ENSP00000253812
  ensembl transcript: ENST00000253812
  gene symbol: PCDHGA3
  hgvsc: ENST00000253812.6:c.2425-73079C>G
  variant of: http://identifiers.org/hgnc/8701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262209
  ensembl protein: ENSP00000461862
  ensembl transcript: ENST00000576222
  gene symbol: PCDHGB3
  hgvsc: ENST00000576222.1:c.2415+48919C>G
  variant of: http://identifiers.org/hgnc/8710
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204956
  ensembl protein: ENSP00000431083
  ensembl transcript: ENST00000517417
  gene symbol: PCDHGA1
  hgvsc: ENST00000517417.1:c.2422-73079C>G
  variant of: http://identifiers.org/hgnc/8696
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253846
  ensembl protein: ENSP00000381611
  ensembl transcript: ENST00000398610
  gene symbol: PCDHGA10
  hgvsc: ENST00000398610.2:c.2436+6117C>G
  variant of: http://identifiers.org/hgnc/8697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081853
  ensembl protein: ENSP00000378077
  ensembl transcript: ENST00000394576
  gene symbol: PCDHGA2
  hgvsc: ENST00000394576.2:c.2425-73079C>G
  variant of: http://identifiers.org/hgnc/8700
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000428333
  ensembl transcript: ENST00000518882
  gene symbol: PCDHGA11
  hgvsc: ENST00000518882.1:c.501C>G
  hgvsp: ENST00000518882.1:c.501C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254122
  ensembl protein: ENSP00000381594
  ensembl transcript: ENST00000398594
  gene symbol: PCDHGB7
  hgvsc: ENST00000398594.2:c.2415+1454C>G
  variant of: http://identifiers.org/hgnc/8714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253767
  ensembl protein: ENSP00000381605
  ensembl transcript: ENST00000398604
  gene symbol: PCDHGA8
  hgvsc: ENST00000398604.2:c.2424+26491C>G
  variant of: http://identifiers.org/hgnc/8706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254221
  ensembl protein: ENSP00000429273
  ensembl transcript: ENST00000523390
  gene symbol: PCDHGB1
  hgvsc: ENST00000523390.1:c.2409+69059C>G
  variant of: http://identifiers.org/hgnc/8708
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253910
  ensembl protein: ENSP00000429018
  ensembl transcript: ENST00000522605
  gene symbol: PCDHGB2
  hgvsc: ENST00000522605.1:c.2421+59172C>G
  variant of: http://identifiers.org/hgnc/8709
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261934
  ensembl protein: ENSP00000460274
  ensembl transcript: ENST00000573521
  gene symbol: PCDHGA9
  hgvsc: ENST00000573521.1:c.2424+16352C>G
  variant of: http://identifiers.org/hgnc/8707
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253731
  ensembl protein: ENSP00000429601
  ensembl transcript: ENST00000517434
  gene symbol: PCDHGA6
  hgvsc: ENST00000517434.1:c.2424+45221C>G
  variant of: http://identifiers.org/hgnc/8704
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253485
  ensembl protein: ENSP00000429834
  ensembl transcript: ENST00000518069
  gene symbol: PCDHGA5
  hgvsc: ENST00000518069.1:c.2421+54977C>G
  variant of: http://identifiers.org/hgnc/8703
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253305
  ensembl protein: ENSP00000428603
  ensembl transcript: ENST00000520790
  gene symbol: PCDHGB6
  hgvsc: ENST00000520790.1:c.2418+11108C>G
  variant of: http://identifiers.org/hgnc/8713
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser167Ser
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: African
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ

http://identifiers.org/exac.variant/5-140801298-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140801298
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140801298
    reference: chr 5
allele count: 11936
allele frequency: 9.956789402559268e-2
allele num: 119878
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254245
  ensembl protein: ENSP00000253812
  ensembl transcript: ENST00000253812
  gene symbol: PCDHGA3
  hgvsc: ENST00000253812.6:c.2425-73076C>A
  variant of: http://identifiers.org/hgnc/8701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253767
  ensembl protein: ENSP00000381605
  ensembl transcript: ENST00000398604
  gene symbol: PCDHGA8
  hgvsc: ENST00000398604.2:c.2424+26494C>A
  variant of: http://identifiers.org/hgnc/8706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081853
  ensembl protein: ENSP00000378077
  ensembl transcript: ENST00000394576
  gene symbol: PCDHGA2
  hgvsc: ENST00000394576.2:c.2425-73076C>A
  variant of: http://identifiers.org/hgnc/8700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253731
  ensembl protein: ENSP00000429601
  ensembl transcript: ENST00000517434
  gene symbol: PCDHGA6
  hgvsc: ENST00000517434.1:c.2424+45224C>A
  variant of: http://identifiers.org/hgnc/8704
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204956
  ensembl protein: ENSP00000431083
  ensembl transcript: ENST00000517417
  gene symbol: PCDHGA1
  hgvsc: ENST00000517417.1:c.2422-73076C>A
  variant of: http://identifiers.org/hgnc/8696
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000428333
  ensembl transcript: ENST00000518882
  gene symbol: PCDHGA11
  hgvsc: ENST00000518882.1:c.504C>A
  hgvsp: ENST00000518882.1:c.504C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000381589
  ensembl transcript: ENST00000398587
  gene symbol: PCDHGA11
  hgvsc: ENST00000398587.2:c.504C>A
  hgvsp: ENST00000398587.2:c.504C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262209
  ensembl protein: ENSP00000461862
  ensembl transcript: ENST00000576222
  gene symbol: PCDHGB3
  hgvsc: ENST00000576222.1:c.2415+48922C>A
  variant of: http://identifiers.org/hgnc/8710
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262576
  ensembl protein: ENSP00000458570
  ensembl transcript: ENST00000571252
  gene symbol: PCDHGA4
  hgvsc: ENST00000571252.1:c.2421+64110C>A
  variant of: http://identifiers.org/hgnc/8702
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253846
  ensembl protein: ENSP00000381611
  ensembl transcript: ENST00000398610
  gene symbol: PCDHGA10
  hgvsc: ENST00000398610.2:c.2436+6120C>A
  variant of: http://identifiers.org/hgnc/8697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253953
  ensembl protein: ENSP00000428288
  ensembl transcript: ENST00000519479
  gene symbol: PCDHGB4
  hgvsc: ENST00000519479.1:c.2397+31450C>A
  variant of: http://identifiers.org/hgnc/8711
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254122
  ensembl protein: ENSP00000381594
  ensembl transcript: ENST00000398594
  gene symbol: PCDHGB7
  hgvsc: ENST00000398594.2:c.2415+1457C>A
  variant of: http://identifiers.org/hgnc/8714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253305
  ensembl protein: ENSP00000428603
  ensembl transcript: ENST00000520790
  gene symbol: PCDHGB6
  hgvsc: ENST00000520790.1:c.2418+11111C>A
  variant of: http://identifiers.org/hgnc/8713
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254221
  ensembl protein: ENSP00000429273
  ensembl transcript: ENST00000523390
  gene symbol: PCDHGB1
  hgvsc: ENST00000523390.1:c.2409+69062C>A
  variant of: http://identifiers.org/hgnc/8708
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261934
  ensembl protein: ENSP00000460274
  ensembl transcript: ENST00000573521
  gene symbol: PCDHGA9
  hgvsc: ENST00000573521.1:c.2424+16355C>A
  variant of: http://identifiers.org/hgnc/8707
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253485
  ensembl protein: ENSP00000429834
  ensembl transcript: ENST00000518069
  gene symbol: PCDHGA5
  hgvsc: ENST00000518069.1:c.2421+54980C>A
  variant of: http://identifiers.org/hgnc/8703
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253537
  ensembl protein: ENSP00000430024
  ensembl transcript: ENST00000518325
  gene symbol: PCDHGA7
  hgvsc: ENST00000518325.1:c.2424+36408C>A
  variant of: http://identifiers.org/hgnc/8705
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253910
  ensembl protein: ENSP00000429018
  ensembl transcript: ENST00000522605
  gene symbol: PCDHGB2
  hgvsc: ENST00000522605.1:c.2421+59175C>A
  variant of: http://identifiers.org/hgnc/8709
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1048
  bin: 1.25e1
  variant carriers: 132
genotype depth: GenotypeDepth
  all individuals: 29023
  bin: 2.25e1
  variant carriers: 1171
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 6.75e1
  variant carriers: 165
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.75e1
  variant carriers: 65
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 8.25e1
  variant carriers: 47
genotype quality: GenotypeQuality
hgvs: p.Leu168Leu
num of homozygotes: 671
population: African
population: Latino
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: ReadPosRankSum

5-140801301-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140801301
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140801301
    reference: chr 5
allele count: 1
allele frequency: 8.334444592612349e-6
allele num: 119984
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253485
  ensembl protein: ENSP00000429834
  ensembl transcript: ENST00000518069
  gene symbol: PCDHGA5
  hgvsc: ENST00000518069.1:c.2421+54983G>A
  variant of: http://identifiers.org/hgnc/8703
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253537
  ensembl protein: ENSP00000430024
  ensembl transcript: ENST00000518325
  gene symbol: PCDHGA7
  hgvsc: ENST00000518325.1:c.2424+36411G>A
  variant of: http://identifiers.org/hgnc/8705
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000381589
  ensembl transcript: ENST00000398587
  gene symbol: PCDHGA11
  hgvsc: ENST00000398587.2:c.507G>A
  hgvsp: ENST00000398587.2:c.507G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253910
  ensembl protein: ENSP00000429018
  ensembl transcript: ENST00000522605
  gene symbol: PCDHGB2
  hgvsc: ENST00000522605.1:c.2421+59178G>A
  variant of: http://identifiers.org/hgnc/8709
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262576
  ensembl protein: ENSP00000458570
  ensembl transcript: ENST00000571252
  gene symbol: PCDHGA4
  hgvsc: ENST00000571252.1:c.2421+64113G>A
  variant of: http://identifiers.org/hgnc/8702
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253953
  ensembl protein: ENSP00000428288
  ensembl transcript: ENST00000519479
  gene symbol: PCDHGB4
  hgvsc: ENST00000519479.1:c.2397+31453G>A
  variant of: http://identifiers.org/hgnc/8711
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081853
  ensembl protein: ENSP00000378077
  ensembl transcript: ENST00000394576
  gene symbol: PCDHGA2
  hgvsc: ENST00000394576.2:c.2425-73073G>A
  variant of: http://identifiers.org/hgnc/8700
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000428333
  ensembl transcript: ENST00000518882
  gene symbol: PCDHGA11
  hgvsc: ENST00000518882.1:c.507G>A
  hgvsp: ENST00000518882.1:c.507G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253767
  ensembl protein: ENSP00000381605
  ensembl transcript: ENST00000398604
  gene symbol: PCDHGA8
  hgvsc: ENST00000398604.2:c.2424+26497G>A
  variant of: http://identifiers.org/hgnc/8706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262209
  ensembl protein: ENSP00000461862
  ensembl transcript: ENST00000576222
  gene symbol: PCDHGB3
  hgvsc: ENST00000576222.1:c.2415+48925G>A
  variant of: http://identifiers.org/hgnc/8710
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253846
  ensembl protein: ENSP00000381611
  ensembl transcript: ENST00000398610
  gene symbol: PCDHGA10
  hgvsc: ENST00000398610.2:c.2436+6123G>A
  variant of: http://identifiers.org/hgnc/8697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204956
  ensembl protein: ENSP00000431083
  ensembl transcript: ENST00000517417
  gene symbol: PCDHGA1
  hgvsc: ENST00000517417.1:c.2422-73073G>A
  variant of: http://identifiers.org/hgnc/8696
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253305
  ensembl protein: ENSP00000428603
  ensembl transcript: ENST00000520790
  gene symbol: PCDHGB6
  hgvsc: ENST00000520790.1:c.2418+11114G>A
  variant of: http://identifiers.org/hgnc/8713
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254245
  ensembl protein: ENSP00000253812
  ensembl transcript: ENST00000253812
  gene symbol: PCDHGA3
  hgvsc: ENST00000253812.6:c.2425-73073G>A
  variant of: http://identifiers.org/hgnc/8701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261934
  ensembl protein: ENSP00000460274
  ensembl transcript: ENST00000573521
  gene symbol: PCDHGA9
  hgvsc: ENST00000573521.1:c.2424+16358G>A
  variant of: http://identifiers.org/hgnc/8707
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254122
  ensembl protein: ENSP00000381594
  ensembl transcript: ENST00000398594
  gene symbol: PCDHGB7
  hgvsc: ENST00000398594.2:c.2415+1460G>A
  variant of: http://identifiers.org/hgnc/8714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254221
  ensembl protein: ENSP00000429273
  ensembl transcript: ENST00000523390
  gene symbol: PCDHGB1
  hgvsc: ENST00000523390.1:c.2409+69065G>A
  variant of: http://identifiers.org/hgnc/8708
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253731
  ensembl protein: ENSP00000429601
  ensembl transcript: ENST00000517434
  gene symbol: PCDHGA6
  hgvsc: ENST00000517434.1:c.2424+45227G>A
  variant of: http://identifiers.org/hgnc/8704
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29914
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln169Gln
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: G
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum

5-140801303-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140801303
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140801303
    reference: chr 5
allele count: 7
allele frequency: 5.835181140694553e-5
allele num: 119962
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253953
  ensembl protein: ENSP00000428288
  ensembl transcript: ENST00000519479
  gene symbol: PCDHGB4
  hgvsc: ENST00000519479.1:c.2397+31455G>A
  variant of: http://identifiers.org/hgnc/8711
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253846
  ensembl protein: ENSP00000381611
  ensembl transcript: ENST00000398610
  gene symbol: PCDHGA10
  hgvsc: ENST00000398610.2:c.2436+6125G>A
  variant of: http://identifiers.org/hgnc/8697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254221
  ensembl protein: ENSP00000429273
  ensembl transcript: ENST00000523390
  gene symbol: PCDHGB1
  hgvsc: ENST00000523390.1:c.2409+69067G>A
  variant of: http://identifiers.org/hgnc/8708
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253485
  ensembl protein: ENSP00000429834
  ensembl transcript: ENST00000518069
  gene symbol: PCDHGA5
  hgvsc: ENST00000518069.1:c.2421+54985G>A
  variant of: http://identifiers.org/hgnc/8703
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081853
  ensembl protein: ENSP00000378077
  ensembl transcript: ENST00000394576
  gene symbol: PCDHGA2
  hgvsc: ENST00000394576.2:c.2425-73071G>A
  variant of: http://identifiers.org/hgnc/8700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253767
  ensembl protein: ENSP00000381605
  ensembl transcript: ENST00000398604
  gene symbol: PCDHGA8
  hgvsc: ENST00000398604.2:c.2424+26499G>A
  variant of: http://identifiers.org/hgnc/8706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253537
  ensembl protein: ENSP00000430024
  ensembl transcript: ENST00000518325
  gene symbol: PCDHGA7
  hgvsc: ENST00000518325.1:c.2424+36413G>A
  variant of: http://identifiers.org/hgnc/8705
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254122
  ensembl protein: ENSP00000381594
  ensembl transcript: ENST00000398594
  gene symbol: PCDHGB7
  hgvsc: ENST00000398594.2:c.2415+1462G>A
  variant of: http://identifiers.org/hgnc/8714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262209
  ensembl protein: ENSP00000461862
  ensembl transcript: ENST00000576222
  gene symbol: PCDHGB3
  hgvsc: ENST00000576222.1:c.2415+48927G>A
  variant of: http://identifiers.org/hgnc/8710
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262576
  ensembl protein: ENSP00000458570
  ensembl transcript: ENST00000571252
  gene symbol: PCDHGA4
  hgvsc: ENST00000571252.1:c.2421+64115G>A
  variant of: http://identifiers.org/hgnc/8702
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253305
  ensembl protein: ENSP00000428603
  ensembl transcript: ENST00000520790
  gene symbol: PCDHGB6
  hgvsc: ENST00000520790.1:c.2418+11116G>A
  variant of: http://identifiers.org/hgnc/8713
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000381589
  ensembl transcript: ENST00000398587
  gene symbol: PCDHGA11
  hgvsc: ENST00000398587.2:c.509G>A
  hgvsp: ENSP00000381589.2:p.Ser170Asn
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253910
  ensembl protein: ENSP00000429018
  ensembl transcript: ENST00000522605
  gene symbol: PCDHGB2
  hgvsc: ENST00000522605.1:c.2421+59180G>A
  variant of: http://identifiers.org/hgnc/8709
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261934
  ensembl protein: ENSP00000460274
  ensembl transcript: ENST00000573521
  gene symbol: PCDHGA9
  hgvsc: ENST00000573521.1:c.2424+16360G>A
  variant of: http://identifiers.org/hgnc/8707
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000428333
  ensembl transcript: ENST00000518882
  gene symbol: PCDHGA11
  hgvsc: ENST00000518882.1:c.509G>A
  hgvsp: ENSP00000428333.1:p.Ser170Asn
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253731
  ensembl protein: ENSP00000429601
  ensembl transcript: ENST00000517434
  gene symbol: PCDHGA6
  hgvsc: ENST00000517434.1:c.2424+45229G>A
  variant of: http://identifiers.org/hgnc/8704
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254245
  ensembl protein: ENSP00000253812
  ensembl transcript: ENST00000253812
  gene symbol: PCDHGA3
  hgvsc: ENST00000253812.6:c.2425-73071G>A
  variant of: http://identifiers.org/hgnc/8701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204956
  ensembl protein: ENSP00000431083
  ensembl transcript: ENST00000517417
  gene symbol: PCDHGA1
  hgvsc: ENST00000517417.1:c.2422-73071G>A
  variant of: http://identifiers.org/hgnc/8696
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19802
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Ser170Asn
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum

5-140801309-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140801309
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140801309
    reference: chr 5
allele count: 2
allele frequency: 1.666694444907415e-5
allele num: 119998
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253537
  ensembl protein: ENSP00000430024
  ensembl transcript: ENST00000518325
  gene symbol: PCDHGA7
  hgvsc: ENST00000518325.1:c.2424+36419A>G
  variant of: http://identifiers.org/hgnc/8705
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262576
  ensembl protein: ENSP00000458570
  ensembl transcript: ENST00000571252
  gene symbol: PCDHGA4
  hgvsc: ENST00000571252.1:c.2421+64121A>G
  variant of: http://identifiers.org/hgnc/8702
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000428333
  ensembl transcript: ENST00000518882
  gene symbol: PCDHGA11
  hgvsc: ENST00000518882.1:c.515A>G
  hgvsp: ENSP00000428333.1:p.Gln172Arg
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254221
  ensembl protein: ENSP00000429273
  ensembl transcript: ENST00000523390
  gene symbol: PCDHGB1
  hgvsc: ENST00000523390.1:c.2409+69073A>G
  variant of: http://identifiers.org/hgnc/8708
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262209
  ensembl protein: ENSP00000461862
  ensembl transcript: ENST00000576222
  gene symbol: PCDHGB3
  hgvsc: ENST00000576222.1:c.2415+48933A>G
  variant of: http://identifiers.org/hgnc/8710
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253767
  ensembl protein: ENSP00000381605
  ensembl transcript: ENST00000398604
  gene symbol: PCDHGA8
  hgvsc: ENST00000398604.2:c.2424+26505A>G
  variant of: http://identifiers.org/hgnc/8706
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000381589
  ensembl transcript: ENST00000398587
  gene symbol: PCDHGA11
  hgvsc: ENST00000398587.2:c.515A>G
  hgvsp: ENSP00000381589.2:p.Gln172Arg
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081853
  ensembl protein: ENSP00000378077
  ensembl transcript: ENST00000394576
  gene symbol: PCDHGA2
  hgvsc: ENST00000394576.2:c.2425-73065A>G
  variant of: http://identifiers.org/hgnc/8700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253846
  ensembl protein: ENSP00000381611
  ensembl transcript: ENST00000398610
  gene symbol: PCDHGA10
  hgvsc: ENST00000398610.2:c.2436+6131A>G
  variant of: http://identifiers.org/hgnc/8697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253485
  ensembl protein: ENSP00000429834
  ensembl transcript: ENST00000518069
  gene symbol: PCDHGA5
  hgvsc: ENST00000518069.1:c.2421+54991A>G
  variant of: http://identifiers.org/hgnc/8703
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253731
  ensembl protein: ENSP00000429601
  ensembl transcript: ENST00000517434
  gene symbol: PCDHGA6
  hgvsc: ENST00000517434.1:c.2424+45235A>G
  variant of: http://identifiers.org/hgnc/8704
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204956
  ensembl protein: ENSP00000431083
  ensembl transcript: ENST00000517417
  gene symbol: PCDHGA1
  hgvsc: ENST00000517417.1:c.2422-73065A>G
  variant of: http://identifiers.org/hgnc/8696
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253910
  ensembl protein: ENSP00000429018
  ensembl transcript: ENST00000522605
  gene symbol: PCDHGB2
  hgvsc: ENST00000522605.1:c.2421+59186A>G
  variant of: http://identifiers.org/hgnc/8709
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253953
  ensembl protein: ENSP00000428288
  ensembl transcript: ENST00000519479
  gene symbol: PCDHGB4
  hgvsc: ENST00000519479.1:c.2397+31461A>G
  variant of: http://identifiers.org/hgnc/8711
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254245
  ensembl protein: ENSP00000253812
  ensembl transcript: ENST00000253812
  gene symbol: PCDHGA3
  hgvsc: ENST00000253812.6:c.2425-73065A>G
  variant of: http://identifiers.org/hgnc/8701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254122
  ensembl protein: ENSP00000381594
  ensembl transcript: ENST00000398594
  gene symbol: PCDHGB7
  hgvsc: ENST00000398594.2:c.2415+1468A>G
  variant of: http://identifiers.org/hgnc/8714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261934
  ensembl protein: ENSP00000460274
  ensembl transcript: ENST00000573521
  gene symbol: PCDHGA9
  hgvsc: ENST00000573521.1:c.2424+16366A>G
  variant of: http://identifiers.org/hgnc/8707
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253305
  ensembl protein: ENSP00000428603
  ensembl transcript: ENST00000520790
  gene symbol: PCDHGB6
  hgvsc: ENST00000520790.1:c.2418+11122A>G
  variant of: http://identifiers.org/hgnc/8713
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1054
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4988
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 19976
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln172Arg
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: European (Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum

5-140801315-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140801315
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140801315
    reference: chr 5
allele count: 1
allele frequency: 8.337085021593051e-6
allele num: 119946
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000428333
  ensembl transcript: ENST00000518882
  gene symbol: PCDHGA11
  hgvsc: ENST00000518882.1:c.521G>A
  hgvsp: ENSP00000428333.1:p.Ser174Asn
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253537
  ensembl protein: ENSP00000430024
  ensembl transcript: ENST00000518325
  gene symbol: PCDHGA7
  hgvsc: ENST00000518325.1:c.2424+36425G>A
  variant of: http://identifiers.org/hgnc/8705
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081853
  ensembl protein: ENSP00000378077
  ensembl transcript: ENST00000394576
  gene symbol: PCDHGA2
  hgvsc: ENST00000394576.2:c.2425-73059G>A
  variant of: http://identifiers.org/hgnc/8700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253731
  ensembl protein: ENSP00000429601
  ensembl transcript: ENST00000517434
  gene symbol: PCDHGA6
  hgvsc: ENST00000517434.1:c.2424+45241G>A
  variant of: http://identifiers.org/hgnc/8704
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261934
  ensembl protein: ENSP00000460274
  ensembl transcript: ENST00000573521
  gene symbol: PCDHGA9
  hgvsc: ENST00000573521.1:c.2424+16372G>A
  variant of: http://identifiers.org/hgnc/8707
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254122
  ensembl protein: ENSP00000381594
  ensembl transcript: ENST00000398594
  gene symbol: PCDHGB7
  hgvsc: ENST00000398594.2:c.2415+1474G>A
  variant of: http://identifiers.org/hgnc/8714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262209
  ensembl protein: ENSP00000461862
  ensembl transcript: ENST00000576222
  gene symbol: PCDHGB3
  hgvsc: ENST00000576222.1:c.2415+48939G>A
  variant of: http://identifiers.org/hgnc/8710
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253910
  ensembl protein: ENSP00000429018
  ensembl transcript: ENST00000522605
  gene symbol: PCDHGB2
  hgvsc: ENST00000522605.1:c.2421+59192G>A
  variant of: http://identifiers.org/hgnc/8709
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254221
  ensembl protein: ENSP00000429273
  ensembl transcript: ENST00000523390
  gene symbol: PCDHGB1
  hgvsc: ENST00000523390.1:c.2409+69079G>A
  variant of: http://identifiers.org/hgnc/8708
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204956
  ensembl protein: ENSP00000431083
  ensembl transcript: ENST00000517417
  gene symbol: PCDHGA1
  hgvsc: ENST00000517417.1:c.2422-73059G>A
  variant of: http://identifiers.org/hgnc/8696
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253767
  ensembl protein: ENSP00000381605
  ensembl transcript: ENST00000398604
  gene symbol: PCDHGA8
  hgvsc: ENST00000398604.2:c.2424+26511G>A
  variant of: http://identifiers.org/hgnc/8706
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000381589
  ensembl transcript: ENST00000398587
  gene symbol: PCDHGA11
  hgvsc: ENST00000398587.2:c.521G>A
  hgvsp: ENSP00000381589.2:p.Ser174Asn
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253953
  ensembl protein: ENSP00000428288
  ensembl transcript: ENST00000519479
  gene symbol: PCDHGB4
  hgvsc: ENST00000519479.1:c.2397+31467G>A
  variant of: http://identifiers.org/hgnc/8711
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254245
  ensembl protein: ENSP00000253812
  ensembl transcript: ENST00000253812
  gene symbol: PCDHGA3
  hgvsc: ENST00000253812.6:c.2425-73059G>A
  variant of: http://identifiers.org/hgnc/8701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253485
  ensembl protein: ENSP00000429834
  ensembl transcript: ENST00000518069
  gene symbol: PCDHGA5
  hgvsc: ENST00000518069.1:c.2421+54997G>A
  variant of: http://identifiers.org/hgnc/8703
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253305
  ensembl protein: ENSP00000428603
  ensembl transcript: ENST00000520790
  gene symbol: PCDHGB6
  hgvsc: ENST00000520790.1:c.2418+11128G>A
  variant of: http://identifiers.org/hgnc/8713
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253846
  ensembl protein: ENSP00000381611
  ensembl transcript: ENST00000398610
  gene symbol: PCDHGA10
  hgvsc: ENST00000398610.2:c.2436+6137G>A
  variant of: http://identifiers.org/hgnc/8697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262576
  ensembl protein: ENSP00000458570
  ensembl transcript: ENST00000571252
  gene symbol: PCDHGA4
  hgvsc: ENST00000571252.1:c.2421+64127G>A
  variant of: http://identifiers.org/hgnc/8702
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1505
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1032
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser174Asn
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
population: Latino
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD

http://identifiers.org/exac.variant/5-140801317-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140801317
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140801317
    reference: chr 5
allele count: 1
allele frequency: 8.335000333400014e-6
allele num: 119976
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253767
  ensembl protein: ENSP00000381605
  ensembl transcript: ENST00000398604
  gene symbol: PCDHGA8
  hgvsc: ENST00000398604.2:c.2424+26513C>A
  variant of: http://identifiers.org/hgnc/8706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253485
  ensembl protein: ENSP00000429834
  ensembl transcript: ENST00000518069
  gene symbol: PCDHGA5
  hgvsc: ENST00000518069.1:c.2421+54999C>A
  variant of: http://identifiers.org/hgnc/8703
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253305
  ensembl protein: ENSP00000428603
  ensembl transcript: ENST00000520790
  gene symbol: PCDHGB6
  hgvsc: ENST00000520790.1:c.2418+11130C>A
  variant of: http://identifiers.org/hgnc/8713
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262576
  ensembl protein: ENSP00000458570
  ensembl transcript: ENST00000571252
  gene symbol: PCDHGA4
  hgvsc: ENST00000571252.1:c.2421+64129C>A
  variant of: http://identifiers.org/hgnc/8702
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000428333
  ensembl transcript: ENST00000518882
  gene symbol: PCDHGA11
  hgvsc: ENST00000518882.1:c.523C>A
  hgvsp: ENSP00000428333.1:p.Pro175Thr
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262209
  ensembl protein: ENSP00000461862
  ensembl transcript: ENST00000576222
  gene symbol: PCDHGB3
  hgvsc: ENST00000576222.1:c.2415+48941C>A
  variant of: http://identifiers.org/hgnc/8710
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253537
  ensembl protein: ENSP00000430024
  ensembl transcript: ENST00000518325
  gene symbol: PCDHGA7
  hgvsc: ENST00000518325.1:c.2424+36427C>A
  variant of: http://identifiers.org/hgnc/8705
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253953
  ensembl protein: ENSP00000428288
  ensembl transcript: ENST00000519479
  gene symbol: PCDHGB4
  hgvsc: ENST00000519479.1:c.2397+31469C>A
  variant of: http://identifiers.org/hgnc/8711
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254122
  ensembl protein: ENSP00000381594
  ensembl transcript: ENST00000398594
  gene symbol: PCDHGB7
  hgvsc: ENST00000398594.2:c.2415+1476C>A
  variant of: http://identifiers.org/hgnc/8714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254221
  ensembl protein: ENSP00000429273
  ensembl transcript: ENST00000523390
  gene symbol: PCDHGB1
  hgvsc: ENST00000523390.1:c.2409+69081C>A
  variant of: http://identifiers.org/hgnc/8708
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204956
  ensembl protein: ENSP00000431083
  ensembl transcript: ENST00000517417
  gene symbol: PCDHGA1
  hgvsc: ENST00000517417.1:c.2422-73057C>A
  variant of: http://identifiers.org/hgnc/8696
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253846
  ensembl protein: ENSP00000381611
  ensembl transcript: ENST00000398610
  gene symbol: PCDHGA10
  hgvsc: ENST00000398610.2:c.2436+6139C>A
  variant of: http://identifiers.org/hgnc/8697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254245
  ensembl protein: ENSP00000253812
  ensembl transcript: ENST00000253812
  gene symbol: PCDHGA3
  hgvsc: ENST00000253812.6:c.2425-73057C>A
  variant of: http://identifiers.org/hgnc/8701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261934
  ensembl protein: ENSP00000460274
  ensembl transcript: ENST00000573521
  gene symbol: PCDHGA9
  hgvsc: ENST00000573521.1:c.2424+16374C>A
  variant of: http://identifiers.org/hgnc/8707
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000381589
  ensembl transcript: ENST00000398587
  gene symbol: PCDHGA11
  hgvsc: ENST00000398587.2:c.523C>A
  hgvsp: ENSP00000381589.2:p.Pro175Thr
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253731
  ensembl protein: ENSP00000429601
  ensembl transcript: ENST00000517434
  gene symbol: PCDHGA6
  hgvsc: ENST00000517434.1:c.2424+45243C>A
  variant of: http://identifiers.org/hgnc/8704
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081853
  ensembl protein: ENSP00000378077
  ensembl transcript: ENST00000394576
  gene symbol: PCDHGA2
  hgvsc: ENST00000394576.2:c.2425-73057C>A
  variant of: http://identifiers.org/hgnc/8700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253910
  ensembl protein: ENSP00000429018
  ensembl transcript: ENST00000522605
  gene symbol: PCDHGB2
  hgvsc: ENST00000522605.1:c.2421+59194C>A
  variant of: http://identifiers.org/hgnc/8709
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20254
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29680
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro175Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: Other
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD

5-140801318-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140801318
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140801318
    reference: chr 5
allele count: 1
allele frequency: 8.336807002917883e-6
allele num: 119950
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081853
  ensembl protein: ENSP00000378077
  ensembl transcript: ENST00000394576
  gene symbol: PCDHGA2
  hgvsc: ENST00000394576.2:c.2425-73056C>T
  variant of: http://identifiers.org/hgnc/8700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253910
  ensembl protein: ENSP00000429018
  ensembl transcript: ENST00000522605
  gene symbol: PCDHGB2
  hgvsc: ENST00000522605.1:c.2421+59195C>T
  variant of: http://identifiers.org/hgnc/8709
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000428333
  ensembl transcript: ENST00000518882
  gene symbol: PCDHGA11
  hgvsc: ENST00000518882.1:c.524C>T
  hgvsp: ENSP00000428333.1:p.Pro175Leu
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254245
  ensembl protein: ENSP00000253812
  ensembl transcript: ENST00000253812
  gene symbol: PCDHGA3
  hgvsc: ENST00000253812.6:c.2425-73056C>T
  variant of: http://identifiers.org/hgnc/8701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253537
  ensembl protein: ENSP00000430024
  ensembl transcript: ENST00000518325
  gene symbol: PCDHGA7
  hgvsc: ENST00000518325.1:c.2424+36428C>T
  variant of: http://identifiers.org/hgnc/8705
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253485
  ensembl protein: ENSP00000429834
  ensembl transcript: ENST00000518069
  gene symbol: PCDHGA5
  hgvsc: ENST00000518069.1:c.2421+55000C>T
  variant of: http://identifiers.org/hgnc/8703
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253731
  ensembl protein: ENSP00000429601
  ensembl transcript: ENST00000517434
  gene symbol: PCDHGA6
  hgvsc: ENST00000517434.1:c.2424+45244C>T
  variant of: http://identifiers.org/hgnc/8704
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254221
  ensembl protein: ENSP00000429273
  ensembl transcript: ENST00000523390
  gene symbol: PCDHGB1
  hgvsc: ENST00000523390.1:c.2409+69082C>T
  variant of: http://identifiers.org/hgnc/8708
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204956
  ensembl protein: ENSP00000431083
  ensembl transcript: ENST00000517417
  gene symbol: PCDHGA1
  hgvsc: ENST00000517417.1:c.2422-73056C>T
  variant of: http://identifiers.org/hgnc/8696
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253767
  ensembl protein: ENSP00000381605
  ensembl transcript: ENST00000398604
  gene symbol: PCDHGA8
  hgvsc: ENST00000398604.2:c.2424+26514C>T
  variant of: http://identifiers.org/hgnc/8706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254122
  ensembl protein: ENSP00000381594
  ensembl transcript: ENST00000398594
  gene symbol: PCDHGB7
  hgvsc: ENST00000398594.2:c.2415+1477C>T
  variant of: http://identifiers.org/hgnc/8714
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000381589
  ensembl transcript: ENST00000398587
  gene symbol: PCDHGA11
  hgvsc: ENST00000398587.2:c.524C>T
  hgvsp: ENSP00000381589.2:p.Pro175Leu
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262209
  ensembl protein: ENSP00000461862
  ensembl transcript: ENST00000576222
  gene symbol: PCDHGB3
  hgvsc: ENST00000576222.1:c.2415+48942C>T
  variant of: http://identifiers.org/hgnc/8710
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253953
  ensembl protein: ENSP00000428288
  ensembl transcript: ENST00000519479
  gene symbol: PCDHGB4
  hgvsc: ENST00000519479.1:c.2397+31470C>T
  variant of: http://identifiers.org/hgnc/8711
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261934
  ensembl protein: ENSP00000460274
  ensembl transcript: ENST00000573521
  gene symbol: PCDHGA9
  hgvsc: ENST00000573521.1:c.2424+16375C>T
  variant of: http://identifiers.org/hgnc/8707
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253846
  ensembl protein: ENSP00000381611
  ensembl transcript: ENST00000398610
  gene symbol: PCDHGA10
  hgvsc: ENST00000398610.2:c.2436+6140C>T
  variant of: http://identifiers.org/hgnc/8697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262576
  ensembl protein: ENSP00000458570
  ensembl transcript: ENST00000571252
  gene symbol: PCDHGA4
  hgvsc: ENST00000571252.1:c.2421+64130C>T
  variant of: http://identifiers.org/hgnc/8702
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253305
  ensembl protein: ENSP00000428603
  ensembl transcript: ENST00000520790
  gene symbol: PCDHGB6
  hgvsc: ENST00000520790.1:c.2418+11131C>T
  variant of: http://identifiers.org/hgnc/8713
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29585
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1011
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro175Leu
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: QD

5-140801331-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140801331
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140801331
    reference: chr 5
allele count: 2
allele frequency: 1.667111229661243e-5
allele num: 119968
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253846
  ensembl protein: ENSP00000381611
  ensembl transcript: ENST00000398610
  gene symbol: PCDHGA10
  hgvsc: ENST00000398610.2:c.2436+6153T>C
  variant of: http://identifiers.org/hgnc/8697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081853
  ensembl protein: ENSP00000378077
  ensembl transcript: ENST00000394576
  gene symbol: PCDHGA2
  hgvsc: ENST00000394576.2:c.2425-73043T>C
  variant of: http://identifiers.org/hgnc/8700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253537
  ensembl protein: ENSP00000430024
  ensembl transcript: ENST00000518325
  gene symbol: PCDHGA7
  hgvsc: ENST00000518325.1:c.2424+36441T>C
  variant of: http://identifiers.org/hgnc/8705
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253305
  ensembl protein: ENSP00000428603
  ensembl transcript: ENST00000520790
  gene symbol: PCDHGB6
  hgvsc: ENST00000520790.1:c.2418+11144T>C
  variant of: http://identifiers.org/hgnc/8713
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204956
  ensembl protein: ENSP00000431083
  ensembl transcript: ENST00000517417
  gene symbol: PCDHGA1
  hgvsc: ENST00000517417.1:c.2422-73043T>C
  variant of: http://identifiers.org/hgnc/8696
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000381589
  ensembl transcript: ENST00000398587
  gene symbol: PCDHGA11
  hgvsc: ENST00000398587.2:c.537T>C
  hgvsp: ENST00000398587.2:c.537T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253910
  ensembl protein: ENSP00000429018
  ensembl transcript: ENST00000522605
  gene symbol: PCDHGB2
  hgvsc: ENST00000522605.1:c.2421+59208T>C
  variant of: http://identifiers.org/hgnc/8709
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000428333
  ensembl transcript: ENST00000518882
  gene symbol: PCDHGA11
  hgvsc: ENST00000518882.1:c.537T>C
  hgvsp: ENST00000518882.1:c.537T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262576
  ensembl protein: ENSP00000458570
  ensembl transcript: ENST00000571252
  gene symbol: PCDHGA4
  hgvsc: ENST00000571252.1:c.2421+64143T>C
  variant of: http://identifiers.org/hgnc/8702
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253485
  ensembl protein: ENSP00000429834
  ensembl transcript: ENST00000518069
  gene symbol: PCDHGA5
  hgvsc: ENST00000518069.1:c.2421+55013T>C
  variant of: http://identifiers.org/hgnc/8703
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254221
  ensembl protein: ENSP00000429273
  ensembl transcript: ENST00000523390
  gene symbol: PCDHGB1
  hgvsc: ENST00000523390.1:c.2409+69095T>C
  variant of: http://identifiers.org/hgnc/8708
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253731
  ensembl protein: ENSP00000429601
  ensembl transcript: ENST00000517434
  gene symbol: PCDHGA6
  hgvsc: ENST00000517434.1:c.2424+45257T>C
  variant of: http://identifiers.org/hgnc/8704
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262209
  ensembl protein: ENSP00000461862
  ensembl transcript: ENST00000576222
  gene symbol: PCDHGB3
  hgvsc: ENST00000576222.1:c.2415+48955T>C
  variant of: http://identifiers.org/hgnc/8710
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253767
  ensembl protein: ENSP00000381605
  ensembl transcript: ENST00000398604
  gene symbol: PCDHGA8
  hgvsc: ENST00000398604.2:c.2424+26527T>C
  variant of: http://identifiers.org/hgnc/8706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254245
  ensembl protein: ENSP00000253812
  ensembl transcript: ENST00000253812
  gene symbol: PCDHGA3
  hgvsc: ENST00000253812.6:c.2425-73043T>C
  variant of: http://identifiers.org/hgnc/8701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254122
  ensembl protein: ENSP00000381594
  ensembl transcript: ENST00000398594
  gene symbol: PCDHGB7
  hgvsc: ENST00000398594.2:c.2415+1490T>C
  variant of: http://identifiers.org/hgnc/8714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261934
  ensembl protein: ENSP00000460274
  ensembl transcript: ENST00000573521
  gene symbol: PCDHGA9
  hgvsc: ENST00000573521.1:c.2424+16388T>C
  variant of: http://identifiers.org/hgnc/8707
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253953
  ensembl protein: ENSP00000428288
  ensembl transcript: ENST00000519479
  gene symbol: PCDHGB4
  hgvsc: ENST00000519479.1:c.2397+31483T>C
  variant of: http://identifiers.org/hgnc/8711
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29693
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Phe179Phe
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: South Asian
population: African
reference allele: T
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS

5-140801341-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140801341
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140801341
    reference: chr 5
allele count: 2
allele frequency: 1.667361400583577e-5
allele num: 119950
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204956
  ensembl protein: ENSP00000431083
  ensembl transcript: ENST00000517417
  gene symbol: PCDHGA1
  hgvsc: ENST00000517417.1:c.2422-73033C>G
  variant of: http://identifiers.org/hgnc/8696
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254221
  ensembl protein: ENSP00000429273
  ensembl transcript: ENST00000523390
  gene symbol: PCDHGB1
  hgvsc: ENST00000523390.1:c.2409+69105C>G
  variant of: http://identifiers.org/hgnc/8708
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262209
  ensembl protein: ENSP00000461862
  ensembl transcript: ENST00000576222
  gene symbol: PCDHGB3
  hgvsc: ENST00000576222.1:c.2415+48965C>G
  variant of: http://identifiers.org/hgnc/8710
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000428333
  ensembl transcript: ENST00000518882
  gene symbol: PCDHGA11
  hgvsc: ENST00000518882.1:c.547C>G
  hgvsp: ENSP00000428333.1:p.Leu183Val
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081853
  ensembl protein: ENSP00000378077
  ensembl transcript: ENST00000394576
  gene symbol: PCDHGA2
  hgvsc: ENST00000394576.2:c.2425-73033C>G
  variant of: http://identifiers.org/hgnc/8700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262576
  ensembl protein: ENSP00000458570
  ensembl transcript: ENST00000571252
  gene symbol: PCDHGA4
  hgvsc: ENST00000571252.1:c.2421+64153C>G
  variant of: http://identifiers.org/hgnc/8702
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253846
  ensembl protein: ENSP00000381611
  ensembl transcript: ENST00000398610
  gene symbol: PCDHGA10
  hgvsc: ENST00000398610.2:c.2436+6163C>G
  variant of: http://identifiers.org/hgnc/8697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253305
  ensembl protein: ENSP00000428603
  ensembl transcript: ENST00000520790
  gene symbol: PCDHGB6
  hgvsc: ENST00000520790.1:c.2418+11154C>G
  variant of: http://identifiers.org/hgnc/8713
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000381589
  ensembl transcript: ENST00000398587
  gene symbol: PCDHGA11
  hgvsc: ENST00000398587.2:c.547C>G
  hgvsp: ENSP00000381589.2:p.Leu183Val
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253537
  ensembl protein: ENSP00000430024
  ensembl transcript: ENST00000518325
  gene symbol: PCDHGA7
  hgvsc: ENST00000518325.1:c.2424+36451C>G
  variant of: http://identifiers.org/hgnc/8705
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253953
  ensembl protein: ENSP00000428288
  ensembl transcript: ENST00000519479
  gene symbol: PCDHGB4
  hgvsc: ENST00000519479.1:c.2397+31493C>G
  variant of: http://identifiers.org/hgnc/8711
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253485
  ensembl protein: ENSP00000429834
  ensembl transcript: ENST00000518069
  gene symbol: PCDHGA5
  hgvsc: ENST00000518069.1:c.2421+55023C>G
  variant of: http://identifiers.org/hgnc/8703
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261934
  ensembl protein: ENSP00000460274
  ensembl transcript: ENST00000573521
  gene symbol: PCDHGA9
  hgvsc: ENST00000573521.1:c.2424+16398C>G
  variant of: http://identifiers.org/hgnc/8707
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254122
  ensembl protein: ENSP00000381594
  ensembl transcript: ENST00000398594
  gene symbol: PCDHGB7
  hgvsc: ENST00000398594.2:c.2415+1500C>G
  variant of: http://identifiers.org/hgnc/8714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253731
  ensembl protein: ENSP00000429601
  ensembl transcript: ENST00000517434
  gene symbol: PCDHGA6
  hgvsc: ENST00000517434.1:c.2424+45267C>G
  variant of: http://identifiers.org/hgnc/8704
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253910
  ensembl protein: ENSP00000429018
  ensembl transcript: ENST00000522605
  gene symbol: PCDHGB2
  hgvsc: ENST00000522605.1:c.2421+59218C>G
  variant of: http://identifiers.org/hgnc/8709
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254245
  ensembl protein: ENSP00000253812
  ensembl transcript: ENST00000253812
  gene symbol: PCDHGA3
  hgvsc: ENST00000253812.6:c.2425-73033C>G
  variant of: http://identifiers.org/hgnc/8701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253767
  ensembl protein: ENSP00000381605
  ensembl transcript: ENST00000398604
  gene symbol: PCDHGA8
  hgvsc: ENST00000398604.2:c.2424+26537C>G
  variant of: http://identifiers.org/hgnc/8706
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5152
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 794
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29654
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Leu183Val
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum

5-140801344-CG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140801344
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140801343
    reference: chr 5
allele count: 2
allele frequency: 1.66814019050161e-5
allele num: 119894
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253953
  ensembl protein: ENSP00000428288
  ensembl transcript: ENST00000519479
  gene symbol: PCDHGB4
  hgvsc: ENST00000519479.1:c.2397+31500delG
  variant of: http://identifiers.org/hgnc/8711
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000428333
  ensembl transcript: ENST00000518882
  gene symbol: PCDHGA11
  hgvsc: ENST00000518882.1:c.554delG
  hgvsp: ENSP00000428333.1:p.Gly185AlafsTer11
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081853
  ensembl protein: ENSP00000378077
  ensembl transcript: ENST00000394576
  gene symbol: PCDHGA2
  hgvsc: ENST00000394576.2:c.2425-73026delG
  variant of: http://identifiers.org/hgnc/8700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204956
  ensembl protein: ENSP00000431083
  ensembl transcript: ENST00000517417
  gene symbol: PCDHGA1
  hgvsc: ENST00000517417.1:c.2422-73026delG
  variant of: http://identifiers.org/hgnc/8696
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000381589
  ensembl transcript: ENST00000398587
  gene symbol: PCDHGA11
  hgvsc: ENST00000398587.2:c.554delG
  hgvsp: ENSP00000381589.2:p.Gly185AlafsTer11
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253731
  ensembl protein: ENSP00000429601
  ensembl transcript: ENST00000517434
  gene symbol: PCDHGA6
  hgvsc: ENST00000517434.1:c.2424+45274delG
  variant of: http://identifiers.org/hgnc/8704
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254122
  ensembl protein: ENSP00000381594
  ensembl transcript: ENST00000398594
  gene symbol: PCDHGB7
  hgvsc: ENST00000398594.2:c.2415+1507delG
  variant of: http://identifiers.org/hgnc/8714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253537
  ensembl protein: ENSP00000430024
  ensembl transcript: ENST00000518325
  gene symbol: PCDHGA7
  hgvsc: ENST00000518325.1:c.2424+36458delG
  variant of: http://identifiers.org/hgnc/8705
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262576
  ensembl protein: ENSP00000458570
  ensembl transcript: ENST00000571252
  gene symbol: PCDHGA4
  hgvsc: ENST00000571252.1:c.2421+64160delG
  variant of: http://identifiers.org/hgnc/8702
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253305
  ensembl protein: ENSP00000428603
  ensembl transcript: ENST00000520790
  gene symbol: PCDHGB6
  hgvsc: ENST00000520790.1:c.2418+11161delG
  variant of: http://identifiers.org/hgnc/8713
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262209
  ensembl protein: ENSP00000461862
  ensembl transcript: ENST00000576222
  gene symbol: PCDHGB3
  hgvsc: ENST00000576222.1:c.2415+48972delG
  variant of: http://identifiers.org/hgnc/8710
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253767
  ensembl protein: ENSP00000381605
  ensembl transcript: ENST00000398604
  gene symbol: PCDHGA8
  hgvsc: ENST00000398604.2:c.2424+26544delG
  variant of: http://identifiers.org/hgnc/8706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253846
  ensembl protein: ENSP00000381611
  ensembl transcript: ENST00000398610
  gene symbol: PCDHGA10
  hgvsc: ENST00000398610.2:c.2436+6170delG
  variant of: http://identifiers.org/hgnc/8697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261934
  ensembl protein: ENSP00000460274
  ensembl transcript: ENST00000573521
  gene symbol: PCDHGA9
  hgvsc: ENST00000573521.1:c.2424+16405delG
  variant of: http://identifiers.org/hgnc/8707
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253485
  ensembl protein: ENSP00000429834
  ensembl transcript: ENST00000518069
  gene symbol: PCDHGA5
  hgvsc: ENST00000518069.1:c.2421+55030delG
  variant of: http://identifiers.org/hgnc/8703
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253910
  ensembl protein: ENSP00000429018
  ensembl transcript: ENST00000522605
  gene symbol: PCDHGB2
  hgvsc: ENST00000522605.1:c.2421+59225delG
  variant of: http://identifiers.org/hgnc/8709
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254221
  ensembl protein: ENSP00000429273
  ensembl transcript: ENST00000523390
  gene symbol: PCDHGB1
  hgvsc: ENST00000523390.1:c.2409+69112delG
  variant of: http://identifiers.org/hgnc/8708
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254245
  ensembl protein: ENSP00000253812
  ensembl transcript: ENST00000253812
  gene symbol: PCDHGA3
  hgvsc: ENST00000253812.6:c.2425-73026delG
  variant of: http://identifiers.org/hgnc/8701
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly185AlafsTer11
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: CG
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff

5-140801354-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140801354
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140801354
    reference: chr 5
allele count: 1
allele frequency: 8.338197281747686e-6
allele num: 119930
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253953
  ensembl protein: ENSP00000428288
  ensembl transcript: ENST00000519479
  gene symbol: PCDHGB4
  hgvsc: ENST00000519479.1:c.2397+31506C>T
  variant of: http://identifiers.org/hgnc/8711
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262209
  ensembl protein: ENSP00000461862
  ensembl transcript: ENST00000576222
  gene symbol: PCDHGB3
  hgvsc: ENST00000576222.1:c.2415+48978C>T
  variant of: http://identifiers.org/hgnc/8710
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253485
  ensembl protein: ENSP00000429834
  ensembl transcript: ENST00000518069
  gene symbol: PCDHGA5
  hgvsc: ENST00000518069.1:c.2421+55036C>T
  variant of: http://identifiers.org/hgnc/8703
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253767
  ensembl protein: ENSP00000381605
  ensembl transcript: ENST00000398604
  gene symbol: PCDHGA8
  hgvsc: ENST00000398604.2:c.2424+26550C>T
  variant of: http://identifiers.org/hgnc/8706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262576
  ensembl protein: ENSP00000458570
  ensembl transcript: ENST00000571252
  gene symbol: PCDHGA4
  hgvsc: ENST00000571252.1:c.2421+64166C>T
  variant of: http://identifiers.org/hgnc/8702
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261934
  ensembl protein: ENSP00000460274
  ensembl transcript: ENST00000573521
  gene symbol: PCDHGA9
  hgvsc: ENST00000573521.1:c.2424+16411C>T
  variant of: http://identifiers.org/hgnc/8707
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254122
  ensembl protein: ENSP00000381594
  ensembl transcript: ENST00000398594
  gene symbol: PCDHGB7
  hgvsc: ENST00000398594.2:c.2415+1513C>T
  variant of: http://identifiers.org/hgnc/8714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204956
  ensembl protein: ENSP00000431083
  ensembl transcript: ENST00000517417
  gene symbol: PCDHGA1
  hgvsc: ENST00000517417.1:c.2422-73020C>T
  variant of: http://identifiers.org/hgnc/8696
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254221
  ensembl protein: ENSP00000429273
  ensembl transcript: ENST00000523390
  gene symbol: PCDHGB1
  hgvsc: ENST00000523390.1:c.2409+69118C>T
  variant of: http://identifiers.org/hgnc/8708
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081853
  ensembl protein: ENSP00000378077
  ensembl transcript: ENST00000394576
  gene symbol: PCDHGA2
  hgvsc: ENST00000394576.2:c.2425-73020C>T
  variant of: http://identifiers.org/hgnc/8700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000428333
  ensembl transcript: ENST00000518882
  gene symbol: PCDHGA11
  hgvsc: ENST00000518882.1:c.560C>T
  hgvsp: ENSP00000428333.1:p.Thr187Met
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253537
  ensembl protein: ENSP00000430024
  ensembl transcript: ENST00000518325
  gene symbol: PCDHGA7
  hgvsc: ENST00000518325.1:c.2424+36464C>T
  variant of: http://identifiers.org/hgnc/8705
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000381589
  ensembl transcript: ENST00000398587
  gene symbol: PCDHGA11
  hgvsc: ENST00000398587.2:c.560C>T
  hgvsp: ENSP00000381589.2:p.Thr187Met
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253910
  ensembl protein: ENSP00000429018
  ensembl transcript: ENST00000522605
  gene symbol: PCDHGB2
  hgvsc: ENST00000522605.1:c.2421+59231C>T
  variant of: http://identifiers.org/hgnc/8709
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253731
  ensembl protein: ENSP00000429601
  ensembl transcript: ENST00000517434
  gene symbol: PCDHGA6
  hgvsc: ENST00000517434.1:c.2424+45280C>T
  variant of: http://identifiers.org/hgnc/8704
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254245
  ensembl protein: ENSP00000253812
  ensembl transcript: ENST00000253812
  gene symbol: PCDHGA3
  hgvsc: ENST00000253812.6:c.2425-73020C>T
  variant of: http://identifiers.org/hgnc/8701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253846
  ensembl protein: ENSP00000381611
  ensembl transcript: ENST00000398610
  gene symbol: PCDHGA10
  hgvsc: ENST00000398610.2:c.2436+6176C>T
  variant of: http://identifiers.org/hgnc/8697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253305
  ensembl protein: ENSP00000428603
  ensembl transcript: ENST00000520790
  gene symbol: PCDHGB6
  hgvsc: ENST00000520790.1:c.2418+11167C>T
  variant of: http://identifiers.org/hgnc/8713
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Thr187Met
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: Latino
population: South Asian
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP

5-140801356-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140801356
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140801356
    reference: chr 5
allele count: 1
allele frequency: 8.337502084375522e-6
allele num: 119940
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000381589
  ensembl transcript: ENST00000398587
  gene symbol: PCDHGA11
  hgvsc: ENST00000398587.2:c.562G>A
  hgvsp: ENSP00000381589.2:p.Asp188Asn
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253910
  ensembl protein: ENSP00000429018
  ensembl transcript: ENST00000522605
  gene symbol: PCDHGB2
  hgvsc: ENST00000522605.1:c.2421+59233G>A
  variant of: http://identifiers.org/hgnc/8709
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253767
  ensembl protein: ENSP00000381605
  ensembl transcript: ENST00000398604
  gene symbol: PCDHGA8
  hgvsc: ENST00000398604.2:c.2424+26552G>A
  variant of: http://identifiers.org/hgnc/8706
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000428333
  ensembl transcript: ENST00000518882
  gene symbol: PCDHGA11
  hgvsc: ENST00000518882.1:c.562G>A
  hgvsp: ENSP00000428333.1:p.Asp188Asn
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253846
  ensembl protein: ENSP00000381611
  ensembl transcript: ENST00000398610
  gene symbol: PCDHGA10
  hgvsc: ENST00000398610.2:c.2436+6178G>A
  variant of: http://identifiers.org/hgnc/8697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254245
  ensembl protein: ENSP00000253812
  ensembl transcript: ENST00000253812
  gene symbol: PCDHGA3
  hgvsc: ENST00000253812.6:c.2425-73018G>A
  variant of: http://identifiers.org/hgnc/8701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253731
  ensembl protein: ENSP00000429601
  ensembl transcript: ENST00000517434
  gene symbol: PCDHGA6
  hgvsc: ENST00000517434.1:c.2424+45282G>A
  variant of: http://identifiers.org/hgnc/8704
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254122
  ensembl protein: ENSP00000381594
  ensembl transcript: ENST00000398594
  gene symbol: PCDHGB7
  hgvsc: ENST00000398594.2:c.2415+1515G>A
  variant of: http://identifiers.org/hgnc/8714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261934
  ensembl protein: ENSP00000460274
  ensembl transcript: ENST00000573521
  gene symbol: PCDHGA9
  hgvsc: ENST00000573521.1:c.2424+16413G>A
  variant of: http://identifiers.org/hgnc/8707
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081853
  ensembl protein: ENSP00000378077
  ensembl transcript: ENST00000394576
  gene symbol: PCDHGA2
  hgvsc: ENST00000394576.2:c.2425-73018G>A
  variant of: http://identifiers.org/hgnc/8700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253537
  ensembl protein: ENSP00000430024
  ensembl transcript: ENST00000518325
  gene symbol: PCDHGA7
  hgvsc: ENST00000518325.1:c.2424+36466G>A
  variant of: http://identifiers.org/hgnc/8705
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253485
  ensembl protein: ENSP00000429834
  ensembl transcript: ENST00000518069
  gene symbol: PCDHGA5
  hgvsc: ENST00000518069.1:c.2421+55038G>A
  variant of: http://identifiers.org/hgnc/8703
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253953
  ensembl protein: ENSP00000428288
  ensembl transcript: ENST00000519479
  gene symbol: PCDHGB4
  hgvsc: ENST00000519479.1:c.2397+31508G>A
  variant of: http://identifiers.org/hgnc/8711
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204956
  ensembl protein: ENSP00000431083
  ensembl transcript: ENST00000517417
  gene symbol: PCDHGA1
  hgvsc: ENST00000517417.1:c.2422-73018G>A
  variant of: http://identifiers.org/hgnc/8696
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262576
  ensembl protein: ENSP00000458570
  ensembl transcript: ENST00000571252
  gene symbol: PCDHGA4
  hgvsc: ENST00000571252.1:c.2421+64168G>A
  variant of: http://identifiers.org/hgnc/8702
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253305
  ensembl protein: ENSP00000428603
  ensembl transcript: ENST00000520790
  gene symbol: PCDHGB6
  hgvsc: ENST00000520790.1:c.2418+11169G>A
  variant of: http://identifiers.org/hgnc/8713
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254221
  ensembl protein: ENSP00000429273
  ensembl transcript: ENST00000523390
  gene symbol: PCDHGB1
  hgvsc: ENST00000523390.1:c.2409+69120G>A
  variant of: http://identifiers.org/hgnc/8708
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262209
  ensembl protein: ENSP00000461862
  ensembl transcript: ENST00000576222
  gene symbol: PCDHGB3
  hgvsc: ENST00000576222.1:c.2415+48980G>A
  variant of: http://identifiers.org/hgnc/8710
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5271
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 636
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1365
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp188Asn
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: MQ

5-140801366-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140801366
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140801366
    reference: chr 5
allele count: 1
allele frequency: 8.338753523123364e-6
allele num: 119922
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253537
  ensembl protein: ENSP00000430024
  ensembl transcript: ENST00000518325
  gene symbol: PCDHGA7
  hgvsc: ENST00000518325.1:c.2424+36476A>G
  variant of: http://identifiers.org/hgnc/8705
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000381589
  ensembl transcript: ENST00000398587
  gene symbol: PCDHGA11
  hgvsc: ENST00000398587.2:c.572A>G
  hgvsp: ENSP00000381589.2:p.Lys191Arg
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081853
  ensembl protein: ENSP00000378077
  ensembl transcript: ENST00000394576
  gene symbol: PCDHGA2
  hgvsc: ENST00000394576.2:c.2425-73008A>G
  variant of: http://identifiers.org/hgnc/8700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204956
  ensembl protein: ENSP00000431083
  ensembl transcript: ENST00000517417
  gene symbol: PCDHGA1
  hgvsc: ENST00000517417.1:c.2422-73008A>G
  variant of: http://identifiers.org/hgnc/8696
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000428333
  ensembl transcript: ENST00000518882
  gene symbol: PCDHGA11
  hgvsc: ENST00000518882.1:c.572A>G
  hgvsp: ENSP00000428333.1:p.Lys191Arg
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253767
  ensembl protein: ENSP00000381605
  ensembl transcript: ENST00000398604
  gene symbol: PCDHGA8
  hgvsc: ENST00000398604.2:c.2424+26562A>G
  variant of: http://identifiers.org/hgnc/8706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254245
  ensembl protein: ENSP00000253812
  ensembl transcript: ENST00000253812
  gene symbol: PCDHGA3
  hgvsc: ENST00000253812.6:c.2425-73008A>G
  variant of: http://identifiers.org/hgnc/8701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254221
  ensembl protein: ENSP00000429273
  ensembl transcript: ENST00000523390
  gene symbol: PCDHGB1
  hgvsc: ENST00000523390.1:c.2409+69130A>G
  variant of: http://identifiers.org/hgnc/8708
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253910
  ensembl protein: ENSP00000429018
  ensembl transcript: ENST00000522605
  gene symbol: PCDHGB2
  hgvsc: ENST00000522605.1:c.2421+59243A>G
  variant of: http://identifiers.org/hgnc/8709
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261934
  ensembl protein: ENSP00000460274
  ensembl transcript: ENST00000573521
  gene symbol: PCDHGA9
  hgvsc: ENST00000573521.1:c.2424+16423A>G
  variant of: http://identifiers.org/hgnc/8707
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253846
  ensembl protein: ENSP00000381611
  ensembl transcript: ENST00000398610
  gene symbol: PCDHGA10
  hgvsc: ENST00000398610.2:c.2436+6188A>G
  variant of: http://identifiers.org/hgnc/8697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262576
  ensembl protein: ENSP00000458570
  ensembl transcript: ENST00000571252
  gene symbol: PCDHGA4
  hgvsc: ENST00000571252.1:c.2421+64178A>G
  variant of: http://identifiers.org/hgnc/8702
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253953
  ensembl protein: ENSP00000428288
  ensembl transcript: ENST00000519479
  gene symbol: PCDHGB4
  hgvsc: ENST00000519479.1:c.2397+31518A>G
  variant of: http://identifiers.org/hgnc/8711
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253305
  ensembl protein: ENSP00000428603
  ensembl transcript: ENST00000520790
  gene symbol: PCDHGB6
  hgvsc: ENST00000520790.1:c.2418+11179A>G
  variant of: http://identifiers.org/hgnc/8713
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253731
  ensembl protein: ENSP00000429601
  ensembl transcript: ENST00000517434
  gene symbol: PCDHGA6
  hgvsc: ENST00000517434.1:c.2424+45292A>G
  variant of: http://identifiers.org/hgnc/8704
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254122
  ensembl protein: ENSP00000381594
  ensembl transcript: ENST00000398594
  gene symbol: PCDHGB7
  hgvsc: ENST00000398594.2:c.2415+1525A>G
  variant of: http://identifiers.org/hgnc/8714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262209
  ensembl protein: ENSP00000461862
  ensembl transcript: ENST00000576222
  gene symbol: PCDHGB3
  hgvsc: ENST00000576222.1:c.2415+48990A>G
  variant of: http://identifiers.org/hgnc/8710
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253485
  ensembl protein: ENSP00000429834
  ensembl transcript: ENST00000518069
  gene symbol: PCDHGA5
  hgvsc: ENST00000518069.1:c.2421+55048A>G
  variant of: http://identifiers.org/hgnc/8703
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5320
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Lys191Arg
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
population: African
reference allele: A
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ

5-140801368-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140801368
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140801368
    reference: chr 5
allele count: 1
allele frequency: 8.338197281747686e-6
allele num: 119930
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204956
  ensembl protein: ENSP00000431083
  ensembl transcript: ENST00000517417
  gene symbol: PCDHGA1
  hgvsc: ENST00000517417.1:c.2422-73006A>G
  variant of: http://identifiers.org/hgnc/8696
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262209
  ensembl protein: ENSP00000461862
  ensembl transcript: ENST00000576222
  gene symbol: PCDHGB3
  hgvsc: ENST00000576222.1:c.2415+48992A>G
  variant of: http://identifiers.org/hgnc/8710
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000428333
  ensembl transcript: ENST00000518882
  gene symbol: PCDHGA11
  hgvsc: ENST00000518882.1:c.574A>G
  hgvsp: ENSP00000428333.1:p.Asn192Asp
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253767
  ensembl protein: ENSP00000381605
  ensembl transcript: ENST00000398604
  gene symbol: PCDHGA8
  hgvsc: ENST00000398604.2:c.2424+26564A>G
  variant of: http://identifiers.org/hgnc/8706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261934
  ensembl protein: ENSP00000460274
  ensembl transcript: ENST00000573521
  gene symbol: PCDHGA9
  hgvsc: ENST00000573521.1:c.2424+16425A>G
  variant of: http://identifiers.org/hgnc/8707
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253305
  ensembl protein: ENSP00000428603
  ensembl transcript: ENST00000520790
  gene symbol: PCDHGB6
  hgvsc: ENST00000520790.1:c.2418+11181A>G
  variant of: http://identifiers.org/hgnc/8713
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262576
  ensembl protein: ENSP00000458570
  ensembl transcript: ENST00000571252
  gene symbol: PCDHGA4
  hgvsc: ENST00000571252.1:c.2421+64180A>G
  variant of: http://identifiers.org/hgnc/8702
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253846
  ensembl protein: ENSP00000381611
  ensembl transcript: ENST00000398610
  gene symbol: PCDHGA10
  hgvsc: ENST00000398610.2:c.2436+6190A>G
  variant of: http://identifiers.org/hgnc/8697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081853
  ensembl protein: ENSP00000378077
  ensembl transcript: ENST00000394576
  gene symbol: PCDHGA2
  hgvsc: ENST00000394576.2:c.2425-73006A>G
  variant of: http://identifiers.org/hgnc/8700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254122
  ensembl protein: ENSP00000381594
  ensembl transcript: ENST00000398594
  gene symbol: PCDHGB7
  hgvsc: ENST00000398594.2:c.2415+1527A>G
  variant of: http://identifiers.org/hgnc/8714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254221
  ensembl protein: ENSP00000429273
  ensembl transcript: ENST00000523390
  gene symbol: PCDHGB1
  hgvsc: ENST00000523390.1:c.2409+69132A>G
  variant of: http://identifiers.org/hgnc/8708
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000381589
  ensembl transcript: ENST00000398587
  gene symbol: PCDHGA11
  hgvsc: ENST00000398587.2:c.574A>G
  hgvsp: ENSP00000381589.2:p.Asn192Asp
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253537
  ensembl protein: ENSP00000430024
  ensembl transcript: ENST00000518325
  gene symbol: PCDHGA7
  hgvsc: ENST00000518325.1:c.2424+36478A>G
  variant of: http://identifiers.org/hgnc/8705
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253731
  ensembl protein: ENSP00000429601
  ensembl transcript: ENST00000517434
  gene symbol: PCDHGA6
  hgvsc: ENST00000517434.1:c.2424+45294A>G
  variant of: http://identifiers.org/hgnc/8704
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253485
  ensembl protein: ENSP00000429834
  ensembl transcript: ENST00000518069
  gene symbol: PCDHGA5
  hgvsc: ENST00000518069.1:c.2421+55050A>G
  variant of: http://identifiers.org/hgnc/8703
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253910
  ensembl protein: ENSP00000429018
  ensembl transcript: ENST00000522605
  gene symbol: PCDHGB2
  hgvsc: ENST00000522605.1:c.2421+59245A>G
  variant of: http://identifiers.org/hgnc/8709
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254245
  ensembl protein: ENSP00000253812
  ensembl transcript: ENST00000253812
  gene symbol: PCDHGA3
  hgvsc: ENST00000253812.6:c.2425-73006A>G
  variant of: http://identifiers.org/hgnc/8701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253953
  ensembl protein: ENSP00000428288
  ensembl transcript: ENST00000519479
  gene symbol: PCDHGB4
  hgvsc: ENST00000519479.1:c.2397+31520A>G
  variant of: http://identifiers.org/hgnc/8711
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asn192Asp
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
population: African
reference allele: A
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD

5-140801375-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140801375
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140801375
    reference: chr 5
allele count: 1
allele frequency: 8.336807002917883e-6
allele num: 119950
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000428333
  ensembl transcript: ENST00000518882
  gene symbol: PCDHGA11
  hgvsc: ENST00000518882.1:c.581A>G
  hgvsp: ENSP00000428333.1:p.Glu194Gly
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253537
  ensembl protein: ENSP00000430024
  ensembl transcript: ENST00000518325
  gene symbol: PCDHGA7
  hgvsc: ENST00000518325.1:c.2424+36485A>G
  variant of: http://identifiers.org/hgnc/8705
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081853
  ensembl protein: ENSP00000378077
  ensembl transcript: ENST00000394576
  gene symbol: PCDHGA2
  hgvsc: ENST00000394576.2:c.2425-72999A>G
  variant of: http://identifiers.org/hgnc/8700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253846
  ensembl protein: ENSP00000381611
  ensembl transcript: ENST00000398610
  gene symbol: PCDHGA10
  hgvsc: ENST00000398610.2:c.2436+6197A>G
  variant of: http://identifiers.org/hgnc/8697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254221
  ensembl protein: ENSP00000429273
  ensembl transcript: ENST00000523390
  gene symbol: PCDHGB1
  hgvsc: ENST00000523390.1:c.2409+69139A>G
  variant of: http://identifiers.org/hgnc/8708
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253485
  ensembl protein: ENSP00000429834
  ensembl transcript: ENST00000518069
  gene symbol: PCDHGA5
  hgvsc: ENST00000518069.1:c.2421+55057A>G
  variant of: http://identifiers.org/hgnc/8703
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204956
  ensembl protein: ENSP00000431083
  ensembl transcript: ENST00000517417
  gene symbol: PCDHGA1
  hgvsc: ENST00000517417.1:c.2422-72999A>G
  variant of: http://identifiers.org/hgnc/8696
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253731
  ensembl protein: ENSP00000429601
  ensembl transcript: ENST00000517434
  gene symbol: PCDHGA6
  hgvsc: ENST00000517434.1:c.2424+45301A>G
  variant of: http://identifiers.org/hgnc/8704
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000381589
  ensembl transcript: ENST00000398587
  gene symbol: PCDHGA11
  hgvsc: ENST00000398587.2:c.581A>G
  hgvsp: ENSP00000381589.2:p.Glu194Gly
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262576
  ensembl protein: ENSP00000458570
  ensembl transcript: ENST00000571252
  gene symbol: PCDHGA4
  hgvsc: ENST00000571252.1:c.2421+64187A>G
  variant of: http://identifiers.org/hgnc/8702
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262209
  ensembl protein: ENSP00000461862
  ensembl transcript: ENST00000576222
  gene symbol: PCDHGB3
  hgvsc: ENST00000576222.1:c.2415+48999A>G
  variant of: http://identifiers.org/hgnc/8710
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253910
  ensembl protein: ENSP00000429018
  ensembl transcript: ENST00000522605
  gene symbol: PCDHGB2
  hgvsc: ENST00000522605.1:c.2421+59252A>G
  variant of: http://identifiers.org/hgnc/8709
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253767
  ensembl protein: ENSP00000381605
  ensembl transcript: ENST00000398604
  gene symbol: PCDHGA8
  hgvsc: ENST00000398604.2:c.2424+26571A>G
  variant of: http://identifiers.org/hgnc/8706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254122
  ensembl protein: ENSP00000381594
  ensembl transcript: ENST00000398594
  gene symbol: PCDHGB7
  hgvsc: ENST00000398594.2:c.2415+1534A>G
  variant of: http://identifiers.org/hgnc/8714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253305
  ensembl protein: ENSP00000428603
  ensembl transcript: ENST00000520790
  gene symbol: PCDHGB6
  hgvsc: ENST00000520790.1:c.2418+11188A>G
  variant of: http://identifiers.org/hgnc/8713
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254245
  ensembl protein: ENSP00000253812
  ensembl transcript: ENST00000253812
  gene symbol: PCDHGA3
  hgvsc: ENST00000253812.6:c.2425-72999A>G
  variant of: http://identifiers.org/hgnc/8701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261934
  ensembl protein: ENSP00000460274
  ensembl transcript: ENST00000573521
  gene symbol: PCDHGA9
  hgvsc: ENST00000573521.1:c.2424+16432A>G
  variant of: http://identifiers.org/hgnc/8707
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253953
  ensembl protein: ENSP00000428288
  ensembl transcript: ENST00000519479
  gene symbol: PCDHGB4
  hgvsc: ENST00000519479.1:c.2397+31527A>G
  variant of: http://identifiers.org/hgnc/8711
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29372
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21612
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5357
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Glu194Gly
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: African
reference allele: A
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum

5-140801379-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140801379
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140801379
    reference: chr 5
allele count: 2
allele frequency: 1.667556029882604e-5
allele num: 119936
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253537
  ensembl protein: ENSP00000430024
  ensembl transcript: ENST00000518325
  gene symbol: PCDHGA7
  hgvsc: ENST00000518325.1:c.2424+36489A>G
  variant of: http://identifiers.org/hgnc/8705
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254221
  ensembl protein: ENSP00000429273
  ensembl transcript: ENST00000523390
  gene symbol: PCDHGB1
  hgvsc: ENST00000523390.1:c.2409+69143A>G
  variant of: http://identifiers.org/hgnc/8708
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000381589
  ensembl transcript: ENST00000398587
  gene symbol: PCDHGA11
  hgvsc: ENST00000398587.2:c.585A>G
  hgvsp: ENST00000398587.2:c.585A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253910
  ensembl protein: ENSP00000429018
  ensembl transcript: ENST00000522605
  gene symbol: PCDHGB2
  hgvsc: ENST00000522605.1:c.2421+59256A>G
  variant of: http://identifiers.org/hgnc/8709
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254245
  ensembl protein: ENSP00000253812
  ensembl transcript: ENST00000253812
  gene symbol: PCDHGA3
  hgvsc: ENST00000253812.6:c.2425-72995A>G
  variant of: http://identifiers.org/hgnc/8701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253767
  ensembl protein: ENSP00000381605
  ensembl transcript: ENST00000398604
  gene symbol: PCDHGA8
  hgvsc: ENST00000398604.2:c.2424+26575A>G
  variant of: http://identifiers.org/hgnc/8706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081853
  ensembl protein: ENSP00000378077
  ensembl transcript: ENST00000394576
  gene symbol: PCDHGA2
  hgvsc: ENST00000394576.2:c.2425-72995A>G
  variant of: http://identifiers.org/hgnc/8700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262209
  ensembl protein: ENSP00000461862
  ensembl transcript: ENST00000576222
  gene symbol: PCDHGB3
  hgvsc: ENST00000576222.1:c.2415+49003A>G
  variant of: http://identifiers.org/hgnc/8710
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204956
  ensembl protein: ENSP00000431083
  ensembl transcript: ENST00000517417
  gene symbol: PCDHGA1
  hgvsc: ENST00000517417.1:c.2422-72995A>G
  variant of: http://identifiers.org/hgnc/8696
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253846
  ensembl protein: ENSP00000381611
  ensembl transcript: ENST00000398610
  gene symbol: PCDHGA10
  hgvsc: ENST00000398610.2:c.2436+6201A>G
  variant of: http://identifiers.org/hgnc/8697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253485
  ensembl protein: ENSP00000429834
  ensembl transcript: ENST00000518069
  gene symbol: PCDHGA5
  hgvsc: ENST00000518069.1:c.2421+55061A>G
  variant of: http://identifiers.org/hgnc/8703
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253953
  ensembl protein: ENSP00000428288
  ensembl transcript: ENST00000519479
  gene symbol: PCDHGB4
  hgvsc: ENST00000519479.1:c.2397+31531A>G
  variant of: http://identifiers.org/hgnc/8711
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000428333
  ensembl transcript: ENST00000518882
  gene symbol: PCDHGA11
  hgvsc: ENST00000518882.1:c.585A>G
  hgvsp: ENST00000518882.1:c.585A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253731
  ensembl protein: ENSP00000429601
  ensembl transcript: ENST00000517434
  gene symbol: PCDHGA6
  hgvsc: ENST00000517434.1:c.2424+45305A>G
  variant of: http://identifiers.org/hgnc/8704
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262576
  ensembl protein: ENSP00000458570
  ensembl transcript: ENST00000571252
  gene symbol: PCDHGA4
  hgvsc: ENST00000571252.1:c.2421+64191A>G
  variant of: http://identifiers.org/hgnc/8702
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253305
  ensembl protein: ENSP00000428603
  ensembl transcript: ENST00000520790
  gene symbol: PCDHGB6
  hgvsc: ENST00000520790.1:c.2418+11192A>G
  variant of: http://identifiers.org/hgnc/8713
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261934
  ensembl protein: ENSP00000460274
  ensembl transcript: ENST00000573521
  gene symbol: PCDHGA9
  hgvsc: ENST00000573521.1:c.2424+16436A>G
  variant of: http://identifiers.org/hgnc/8707
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254122
  ensembl protein: ENSP00000381594
  ensembl transcript: ENST00000398594
  gene symbol: PCDHGB7
  hgvsc: ENST00000398594.2:c.2415+1538A>G
  variant of: http://identifiers.org/hgnc/8714
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu195Leu
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/5-140801382-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140801382
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140801382
    reference: chr 5
allele count: 1
allele frequency: 8.337502084375522e-6
allele num: 119940
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262576
  ensembl protein: ENSP00000458570
  ensembl transcript: ENST00000571252
  gene symbol: PCDHGA4
  hgvsc: ENST00000571252.1:c.2421+64194A>C
  variant of: http://identifiers.org/hgnc/8702
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253731
  ensembl protein: ENSP00000429601
  ensembl transcript: ENST00000517434
  gene symbol: PCDHGA6
  hgvsc: ENST00000517434.1:c.2424+45308A>C
  variant of: http://identifiers.org/hgnc/8704
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204956
  ensembl protein: ENSP00000431083
  ensembl transcript: ENST00000517417
  gene symbol: PCDHGA1
  hgvsc: ENST00000517417.1:c.2422-72992A>C
  variant of: http://identifiers.org/hgnc/8696
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261934
  ensembl protein: ENSP00000460274
  ensembl transcript: ENST00000573521
  gene symbol: PCDHGA9
  hgvsc: ENST00000573521.1:c.2424+16439A>C
  variant of: http://identifiers.org/hgnc/8707
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000428333
  ensembl transcript: ENST00000518882
  gene symbol: PCDHGA11
  hgvsc: ENST00000518882.1:c.588A>C
  hgvsp: ENST00000518882.1:c.588A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253485
  ensembl protein: ENSP00000429834
  ensembl transcript: ENST00000518069
  gene symbol: PCDHGA5
  hgvsc: ENST00000518069.1:c.2421+55064A>C
  variant of: http://identifiers.org/hgnc/8703
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253846
  ensembl protein: ENSP00000381611
  ensembl transcript: ENST00000398610
  gene symbol: PCDHGA10
  hgvsc: ENST00000398610.2:c.2436+6204A>C
  variant of: http://identifiers.org/hgnc/8697
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000381589
  ensembl transcript: ENST00000398587
  gene symbol: PCDHGA11
  hgvsc: ENST00000398587.2:c.588A>C
  hgvsp: ENST00000398587.2:c.588A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253910
  ensembl protein: ENSP00000429018
  ensembl transcript: ENST00000522605
  gene symbol: PCDHGB2
  hgvsc: ENST00000522605.1:c.2421+59259A>C
  variant of: http://identifiers.org/hgnc/8709
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262209
  ensembl protein: ENSP00000461862
  ensembl transcript: ENST00000576222
  gene symbol: PCDHGB3
  hgvsc: ENST00000576222.1:c.2415+49006A>C
  variant of: http://identifiers.org/hgnc/8710
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253537
  ensembl protein: ENSP00000430024
  ensembl transcript: ENST00000518325
  gene symbol: PCDHGA7
  hgvsc: ENST00000518325.1:c.2424+36492A>C
  variant of: http://identifiers.org/hgnc/8705
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254122
  ensembl protein: ENSP00000381594
  ensembl transcript: ENST00000398594
  gene symbol: PCDHGB7
  hgvsc: ENST00000398594.2:c.2415+1541A>C
  variant of: http://identifiers.org/hgnc/8714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253767
  ensembl protein: ENSP00000381605
  ensembl transcript: ENST00000398604
  gene symbol: PCDHGA8
  hgvsc: ENST00000398604.2:c.2424+26578A>C
  variant of: http://identifiers.org/hgnc/8706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254245
  ensembl protein: ENSP00000253812
  ensembl transcript: ENST00000253812
  gene symbol: PCDHGA3
  hgvsc: ENST00000253812.6:c.2425-72992A>C
  variant of: http://identifiers.org/hgnc/8701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253305
  ensembl protein: ENSP00000428603
  ensembl transcript: ENST00000520790
  gene symbol: PCDHGB6
  hgvsc: ENST00000520790.1:c.2418+11195A>C
  variant of: http://identifiers.org/hgnc/8713
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081853
  ensembl protein: ENSP00000378077
  ensembl transcript: ENST00000394576
  gene symbol: PCDHGA2
  hgvsc: ENST00000394576.2:c.2425-72992A>C
  variant of: http://identifiers.org/hgnc/8700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253953
  ensembl protein: ENSP00000428288
  ensembl transcript: ENST00000519479
  gene symbol: PCDHGB4
  hgvsc: ENST00000519479.1:c.2397+31534A>C
  variant of: http://identifiers.org/hgnc/8711
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254221
  ensembl protein: ENSP00000429273
  ensembl transcript: ENST00000523390
  gene symbol: PCDHGB1
  hgvsc: ENST00000523390.1:c.2409+69146A>C
  variant of: http://identifiers.org/hgnc/8708
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 574
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21727
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val196Val
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: Other
population: Latino
population: European (Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: QD

5-140801386-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140801386
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140801386
    reference: chr 5
allele count: 5
allele frequency: 4.16902911649935e-5
allele num: 119932
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253767
  ensembl protein: ENSP00000381605
  ensembl transcript: ENST00000398604
  gene symbol: PCDHGA8
  hgvsc: ENST00000398604.2:c.2424+26582G>C
  variant of: http://identifiers.org/hgnc/8706
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000381589
  ensembl transcript: ENST00000398587
  gene symbol: PCDHGA11
  hgvsc: ENST00000398587.2:c.592G>C
  hgvsp: ENSP00000381589.2:p.Glu198Gln
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204956
  ensembl protein: ENSP00000431083
  ensembl transcript: ENST00000517417
  gene symbol: PCDHGA1
  hgvsc: ENST00000517417.1:c.2422-72988G>C
  variant of: http://identifiers.org/hgnc/8696
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254221
  ensembl protein: ENSP00000429273
  ensembl transcript: ENST00000523390
  gene symbol: PCDHGB1
  hgvsc: ENST00000523390.1:c.2409+69150G>C
  variant of: http://identifiers.org/hgnc/8708
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254122
  ensembl protein: ENSP00000381594
  ensembl transcript: ENST00000398594
  gene symbol: PCDHGB7
  hgvsc: ENST00000398594.2:c.2415+1545G>C
  variant of: http://identifiers.org/hgnc/8714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253305
  ensembl protein: ENSP00000428603
  ensembl transcript: ENST00000520790
  gene symbol: PCDHGB6
  hgvsc: ENST00000520790.1:c.2418+11199G>C
  variant of: http://identifiers.org/hgnc/8713
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253953
  ensembl protein: ENSP00000428288
  ensembl transcript: ENST00000519479
  gene symbol: PCDHGB4
  hgvsc: ENST00000519479.1:c.2397+31538G>C
  variant of: http://identifiers.org/hgnc/8711
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253731
  ensembl protein: ENSP00000429601
  ensembl transcript: ENST00000517434
  gene symbol: PCDHGA6
  hgvsc: ENST00000517434.1:c.2424+45312G>C
  variant of: http://identifiers.org/hgnc/8704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000428333
  ensembl transcript: ENST00000518882
  gene symbol: PCDHGA11
  hgvsc: ENST00000518882.1:c.592G>C
  hgvsp: ENSP00000428333.1:p.Glu198Gln
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262576
  ensembl protein: ENSP00000458570
  ensembl transcript: ENST00000571252
  gene symbol: PCDHGA4
  hgvsc: ENST00000571252.1:c.2421+64198G>C
  variant of: http://identifiers.org/hgnc/8702
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253846
  ensembl protein: ENSP00000381611
  ensembl transcript: ENST00000398610
  gene symbol: PCDHGA10
  hgvsc: ENST00000398610.2:c.2436+6208G>C
  variant of: http://identifiers.org/hgnc/8697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262209
  ensembl protein: ENSP00000461862
  ensembl transcript: ENST00000576222
  gene symbol: PCDHGB3
  hgvsc: ENST00000576222.1:c.2415+49010G>C
  variant of: http://identifiers.org/hgnc/8710
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253537
  ensembl protein: ENSP00000430024
  ensembl transcript: ENST00000518325
  gene symbol: PCDHGA7
  hgvsc: ENST00000518325.1:c.2424+36496G>C
  variant of: http://identifiers.org/hgnc/8705
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253485
  ensembl protein: ENSP00000429834
  ensembl transcript: ENST00000518069
  gene symbol: PCDHGA5
  hgvsc: ENST00000518069.1:c.2421+55068G>C
  variant of: http://identifiers.org/hgnc/8703
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081853
  ensembl protein: ENSP00000378077
  ensembl transcript: ENST00000394576
  gene symbol: PCDHGA2
  hgvsc: ENST00000394576.2:c.2425-72988G>C
  variant of: http://identifiers.org/hgnc/8700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254245
  ensembl protein: ENSP00000253812
  ensembl transcript: ENST00000253812
  gene symbol: PCDHGA3
  hgvsc: ENST00000253812.6:c.2425-72988G>C
  variant of: http://identifiers.org/hgnc/8701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253910
  ensembl protein: ENSP00000429018
  ensembl transcript: ENST00000522605
  gene symbol: PCDHGB2
  hgvsc: ENST00000522605.1:c.2421+59263G>C
  variant of: http://identifiers.org/hgnc/8709
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261934
  ensembl protein: ENSP00000460274
  ensembl transcript: ENST00000573521
  gene symbol: PCDHGA9
  hgvsc: ENST00000573521.1:c.2424+16443G>C
  variant of: http://identifiers.org/hgnc/8707
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21782
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29309
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu198Gln
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS

5-140801398-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140801398
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140801398
    reference: chr 5
allele count: 15
allele frequency: 1.251042535446205e-4
allele num: 119900
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253953
  ensembl protein: ENSP00000428288
  ensembl transcript: ENST00000519479
  gene symbol: PCDHGB4
  hgvsc: ENST00000519479.1:c.2397+31550G>C
  variant of: http://identifiers.org/hgnc/8711
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253305
  ensembl protein: ENSP00000428603
  ensembl transcript: ENST00000520790
  gene symbol: PCDHGB6
  hgvsc: ENST00000520790.1:c.2418+11211G>C
  variant of: http://identifiers.org/hgnc/8713
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253846
  ensembl protein: ENSP00000381611
  ensembl transcript: ENST00000398610
  gene symbol: PCDHGA10
  hgvsc: ENST00000398610.2:c.2436+6220G>C
  variant of: http://identifiers.org/hgnc/8697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254221
  ensembl protein: ENSP00000429273
  ensembl transcript: ENST00000523390
  gene symbol: PCDHGB1
  hgvsc: ENST00000523390.1:c.2409+69162G>C
  variant of: http://identifiers.org/hgnc/8708
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261934
  ensembl protein: ENSP00000460274
  ensembl transcript: ENST00000573521
  gene symbol: PCDHGA9
  hgvsc: ENST00000573521.1:c.2424+16455G>C
  variant of: http://identifiers.org/hgnc/8707
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253731
  ensembl protein: ENSP00000429601
  ensembl transcript: ENST00000517434
  gene symbol: PCDHGA6
  hgvsc: ENST00000517434.1:c.2424+45324G>C
  variant of: http://identifiers.org/hgnc/8704
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000428333
  ensembl transcript: ENST00000518882
  gene symbol: PCDHGA11
  hgvsc: ENST00000518882.1:c.604G>C
  hgvsp: ENSP00000428333.1:p.Asp202His
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253485
  ensembl protein: ENSP00000429834
  ensembl transcript: ENST00000518069
  gene symbol: PCDHGA5
  hgvsc: ENST00000518069.1:c.2421+55080G>C
  variant of: http://identifiers.org/hgnc/8703
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000381589
  ensembl transcript: ENST00000398587
  gene symbol: PCDHGA11
  hgvsc: ENST00000398587.2:c.604G>C
  hgvsp: ENSP00000381589.2:p.Asp202His
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204956
  ensembl protein: ENSP00000431083
  ensembl transcript: ENST00000517417
  gene symbol: PCDHGA1
  hgvsc: ENST00000517417.1:c.2422-72976G>C
  variant of: http://identifiers.org/hgnc/8696
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254245
  ensembl protein: ENSP00000253812
  ensembl transcript: ENST00000253812
  gene symbol: PCDHGA3
  hgvsc: ENST00000253812.6:c.2425-72976G>C
  variant of: http://identifiers.org/hgnc/8701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253910
  ensembl protein: ENSP00000429018
  ensembl transcript: ENST00000522605
  gene symbol: PCDHGB2
  hgvsc: ENST00000522605.1:c.2421+59275G>C
  variant of: http://identifiers.org/hgnc/8709
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081853
  ensembl protein: ENSP00000378077
  ensembl transcript: ENST00000394576
  gene symbol: PCDHGA2
  hgvsc: ENST00000394576.2:c.2425-72976G>C
  variant of: http://identifiers.org/hgnc/8700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262576
  ensembl protein: ENSP00000458570
  ensembl transcript: ENST00000571252
  gene symbol: PCDHGA4
  hgvsc: ENST00000571252.1:c.2421+64210G>C
  variant of: http://identifiers.org/hgnc/8702
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253767
  ensembl protein: ENSP00000381605
  ensembl transcript: ENST00000398604
  gene symbol: PCDHGA8
  hgvsc: ENST00000398604.2:c.2424+26594G>C
  variant of: http://identifiers.org/hgnc/8706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262209
  ensembl protein: ENSP00000461862
  ensembl transcript: ENST00000576222
  gene symbol: PCDHGB3
  hgvsc: ENST00000576222.1:c.2415+49022G>C
  variant of: http://identifiers.org/hgnc/8710
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253537
  ensembl protein: ENSP00000430024
  ensembl transcript: ENST00000518325
  gene symbol: PCDHGA7
  hgvsc: ENST00000518325.1:c.2424+36508G>C
  variant of: http://identifiers.org/hgnc/8705
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254122
  ensembl protein: ENSP00000381594
  ensembl transcript: ENST00000398594
  gene symbol: PCDHGB7
  hgvsc: ENST00000398594.2:c.2415+1557G>C
  variant of: http://identifiers.org/hgnc/8714
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5399
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 5.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
hgvs: p.Asp202His
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ

5-140801401-CGA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140801401
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140801399
    reference: chr 5
allele count: 2
allele frequency: 1.668307168715904e-5
allele num: 119882
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253953
  ensembl protein: ENSP00000428288
  ensembl transcript: ENST00000519479
  gene symbol: PCDHGB4
  hgvsc: ENST00000519479.1:c.2397+31558_2397+31559delGA
  variant of: http://identifiers.org/hgnc/8711
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262576
  ensembl protein: ENSP00000458570
  ensembl transcript: ENST00000571252
  gene symbol: PCDHGA4
  hgvsc: ENST00000571252.1:c.2421+64218_2421+64219delGA
  variant of: http://identifiers.org/hgnc/8702
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204956
  ensembl protein: ENSP00000431083
  ensembl transcript: ENST00000517417
  gene symbol: PCDHGA1
  hgvsc: ENST00000517417.1:c.2422-72968_2422-72967delGA
  variant of: http://identifiers.org/hgnc/8696
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000428333
  ensembl transcript: ENST00000518882
  gene symbol: PCDHGA11
  hgvsc: ENST00000518882.1:c.612_613delGA
  hgvsp: ENSP00000428333.1:p.Lys205ArgfsTer33
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262209
  ensembl protein: ENSP00000461862
  ensembl transcript: ENST00000576222
  gene symbol: PCDHGB3
  hgvsc: ENST00000576222.1:c.2415+49030_2415+49031delGA
  variant of: http://identifiers.org/hgnc/8710
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253731
  ensembl protein: ENSP00000429601
  ensembl transcript: ENST00000517434
  gene symbol: PCDHGA6
  hgvsc: ENST00000517434.1:c.2424+45332_2424+45333delGA
  variant of: http://identifiers.org/hgnc/8704
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253767
  ensembl protein: ENSP00000381605
  ensembl transcript: ENST00000398604
  gene symbol: PCDHGA8
  hgvsc: ENST00000398604.2:c.2424+26602_2424+26603delGA
  variant of: http://identifiers.org/hgnc/8706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261934
  ensembl protein: ENSP00000460274
  ensembl transcript: ENST00000573521
  gene symbol: PCDHGA9
  hgvsc: ENST00000573521.1:c.2424+16463_2424+16464delGA
  variant of: http://identifiers.org/hgnc/8707
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253846
  ensembl protein: ENSP00000381611
  ensembl transcript: ENST00000398610
  gene symbol: PCDHGA10
  hgvsc: ENST00000398610.2:c.2436+6228_2436+6229delGA
  variant of: http://identifiers.org/hgnc/8697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253537
  ensembl protein: ENSP00000430024
  ensembl transcript: ENST00000518325
  gene symbol: PCDHGA7
  hgvsc: ENST00000518325.1:c.2424+36516_2424+36517delGA
  variant of: http://identifiers.org/hgnc/8705
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254122
  ensembl protein: ENSP00000381594
  ensembl transcript: ENST00000398594
  gene symbol: PCDHGB7
  hgvsc: ENST00000398594.2:c.2415+1565_2415+1566delGA
  variant of: http://identifiers.org/hgnc/8714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253305
  ensembl protein: ENSP00000428603
  ensembl transcript: ENST00000520790
  gene symbol: PCDHGB6
  hgvsc: ENST00000520790.1:c.2418+11219_2418+11220delGA
  variant of: http://identifiers.org/hgnc/8713
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000381589
  ensembl transcript: ENST00000398587
  gene symbol: PCDHGA11
  hgvsc: ENST00000398587.2:c.612_613delGA
  hgvsp: ENSP00000381589.2:p.Lys205ArgfsTer33
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253910
  ensembl protein: ENSP00000429018
  ensembl transcript: ENST00000522605
  gene symbol: PCDHGB2
  hgvsc: ENST00000522605.1:c.2421+59283_2421+59284delGA
  variant of: http://identifiers.org/hgnc/8709
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081853
  ensembl protein: ENSP00000378077
  ensembl transcript: ENST00000394576
  gene symbol: PCDHGA2
  hgvsc: ENST00000394576.2:c.2425-72968_2425-72967delGA
  variant of: http://identifiers.org/hgnc/8700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254221
  ensembl protein: ENSP00000429273
  ensembl transcript: ENST00000523390
  gene symbol: PCDHGB1
  hgvsc: ENST00000523390.1:c.2409+69170_2409+69171delGA
  variant of: http://identifiers.org/hgnc/8708
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253485
  ensembl protein: ENSP00000429834
  ensembl transcript: ENST00000518069
  gene symbol: PCDHGA5
  hgvsc: ENST00000518069.1:c.2421+55088_2421+55089delGA
  variant of: http://identifiers.org/hgnc/8703
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254245
  ensembl protein: ENSP00000253812
  ensembl transcript: ENST00000253812
  gene symbol: PCDHGA3
  hgvsc: ENST00000253812.6:c.2425-72968_2425-72967delGA
  variant of: http://identifiers.org/hgnc/8701
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Lys205ArgfsTer33
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: CGA
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS

5-140801402-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140801402
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140801402
    reference: chr 5
allele count: 1
allele frequency: 8.34125752798492e-6
allele num: 119886
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262209
  ensembl protein: ENSP00000461862
  ensembl transcript: ENST00000576222
  gene symbol: PCDHGB3
  hgvsc: ENST00000576222.1:c.2415+49026G>A
  variant of: http://identifiers.org/hgnc/8710
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253846
  ensembl protein: ENSP00000381611
  ensembl transcript: ENST00000398610
  gene symbol: PCDHGA10
  hgvsc: ENST00000398610.2:c.2436+6224G>A
  variant of: http://identifiers.org/hgnc/8697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253537
  ensembl protein: ENSP00000430024
  ensembl transcript: ENST00000518325
  gene symbol: PCDHGA7
  hgvsc: ENST00000518325.1:c.2424+36512G>A
  variant of: http://identifiers.org/hgnc/8705
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081853
  ensembl protein: ENSP00000378077
  ensembl transcript: ENST00000394576
  gene symbol: PCDHGA2
  hgvsc: ENST00000394576.2:c.2425-72972G>A
  variant of: http://identifiers.org/hgnc/8700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253305
  ensembl protein: ENSP00000428603
  ensembl transcript: ENST00000520790
  gene symbol: PCDHGB6
  hgvsc: ENST00000520790.1:c.2418+11215G>A
  variant of: http://identifiers.org/hgnc/8713
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254122
  ensembl protein: ENSP00000381594
  ensembl transcript: ENST00000398594
  gene symbol: PCDHGB7
  hgvsc: ENST00000398594.2:c.2415+1561G>A
  variant of: http://identifiers.org/hgnc/8714
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000428333
  ensembl transcript: ENST00000518882
  gene symbol: PCDHGA11
  hgvsc: ENST00000518882.1:c.608G>A
  hgvsp: ENSP00000428333.1:p.Arg203Gln
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000381589
  ensembl transcript: ENST00000398587
  gene symbol: PCDHGA11
  hgvsc: ENST00000398587.2:c.608G>A
  hgvsp: ENSP00000381589.2:p.Arg203Gln
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253485
  ensembl protein: ENSP00000429834
  ensembl transcript: ENST00000518069
  gene symbol: PCDHGA5
  hgvsc: ENST00000518069.1:c.2421+55084G>A
  variant of: http://identifiers.org/hgnc/8703
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253731
  ensembl protein: ENSP00000429601
  ensembl transcript: ENST00000517434
  gene symbol: PCDHGA6
  hgvsc: ENST00000517434.1:c.2424+45328G>A
  variant of: http://identifiers.org/hgnc/8704
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253767
  ensembl protein: ENSP00000381605
  ensembl transcript: ENST00000398604
  gene symbol: PCDHGA8
  hgvsc: ENST00000398604.2:c.2424+26598G>A
  variant of: http://identifiers.org/hgnc/8706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254221
  ensembl protein: ENSP00000429273
  ensembl transcript: ENST00000523390
  gene symbol: PCDHGB1
  hgvsc: ENST00000523390.1:c.2409+69166G>A
  variant of: http://identifiers.org/hgnc/8708
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204956
  ensembl protein: ENSP00000431083
  ensembl transcript: ENST00000517417
  gene symbol: PCDHGA1
  hgvsc: ENST00000517417.1:c.2422-72972G>A
  variant of: http://identifiers.org/hgnc/8696
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254245
  ensembl protein: ENSP00000253812
  ensembl transcript: ENST00000253812
  gene symbol: PCDHGA3
  hgvsc: ENST00000253812.6:c.2425-72972G>A
  variant of: http://identifiers.org/hgnc/8701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253910
  ensembl protein: ENSP00000429018
  ensembl transcript: ENST00000522605
  gene symbol: PCDHGB2
  hgvsc: ENST00000522605.1:c.2421+59279G>A
  variant of: http://identifiers.org/hgnc/8709
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253953
  ensembl protein: ENSP00000428288
  ensembl transcript: ENST00000519479
  gene symbol: PCDHGB4
  hgvsc: ENST00000519479.1:c.2397+31554G>A
  variant of: http://identifiers.org/hgnc/8711
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261934
  ensembl protein: ENSP00000460274
  ensembl transcript: ENST00000573521
  gene symbol: PCDHGA9
  hgvsc: ENST00000573521.1:c.2424+16459G>A
  variant of: http://identifiers.org/hgnc/8707
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262576
  ensembl protein: ENSP00000458570
  ensembl transcript: ENST00000571252
  gene symbol: PCDHGA4
  hgvsc: ENST00000571252.1:c.2421+64214G>A
  variant of: http://identifiers.org/hgnc/8702
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21930
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1402
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg203Gln
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: South Asian
reference allele: G
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum

5-140801404-GAGAA-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140801404
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140801400
    reference: chr 5
allele count: 1
allele frequency: 8.340422692622062e-6
allele num: 119898
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253537
  ensembl protein: ENSP00000430024
  ensembl transcript: ENST00000518325
  gene symbol: PCDHGA7
  hgvsc: ENST00000518325.1:c.2424+36518_2424+36521delAAGA
  variant of: http://identifiers.org/hgnc/8705
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254221
  ensembl protein: ENSP00000429273
  ensembl transcript: ENST00000523390
  gene symbol: PCDHGB1
  hgvsc: ENST00000523390.1:c.2409+69172_2409+69175delAAGA
  variant of: http://identifiers.org/hgnc/8708
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253767
  ensembl protein: ENSP00000381605
  ensembl transcript: ENST00000398604
  gene symbol: PCDHGA8
  hgvsc: ENST00000398604.2:c.2424+26604_2424+26607delAAGA
  variant of: http://identifiers.org/hgnc/8706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253485
  ensembl protein: ENSP00000429834
  ensembl transcript: ENST00000518069
  gene symbol: PCDHGA5
  hgvsc: ENST00000518069.1:c.2421+55090_2421+55093delAAGA
  variant of: http://identifiers.org/hgnc/8703
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253846
  ensembl protein: ENSP00000381611
  ensembl transcript: ENST00000398610
  gene symbol: PCDHGA10
  hgvsc: ENST00000398610.2:c.2436+6230_2436+6233delAAGA
  variant of: http://identifiers.org/hgnc/8697
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000428333
  ensembl transcript: ENST00000518882
  gene symbol: PCDHGA11
  hgvsc: ENST00000518882.1:c.614_617delAAGA
  hgvsp: ENSP00000428333.1:p.Lys205ArgfsTer11
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262209
  ensembl protein: ENSP00000461862
  ensembl transcript: ENST00000576222
  gene symbol: PCDHGB3
  hgvsc: ENST00000576222.1:c.2415+49032_2415+49035delAAGA
  variant of: http://identifiers.org/hgnc/8710
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000381589
  ensembl transcript: ENST00000398587
  gene symbol: PCDHGA11
  hgvsc: ENST00000398587.2:c.614_617delAAGA
  hgvsp: ENSP00000381589.2:p.Lys205ArgfsTer11
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253910
  ensembl protein: ENSP00000429018
  ensembl transcript: ENST00000522605
  gene symbol: PCDHGB2
  hgvsc: ENST00000522605.1:c.2421+59285_2421+59288delAAGA
  variant of: http://identifiers.org/hgnc/8709
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253305
  ensembl protein: ENSP00000428603
  ensembl transcript: ENST00000520790
  gene symbol: PCDHGB6
  hgvsc: ENST00000520790.1:c.2418+11221_2418+11224delAAGA
  variant of: http://identifiers.org/hgnc/8713
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262576
  ensembl protein: ENSP00000458570
  ensembl transcript: ENST00000571252
  gene symbol: PCDHGA4
  hgvsc: ENST00000571252.1:c.2421+64220_2421+64223delAAGA
  variant of: http://identifiers.org/hgnc/8702
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204956
  ensembl protein: ENSP00000431083
  ensembl transcript: ENST00000517417
  gene symbol: PCDHGA1
  hgvsc: ENST00000517417.1:c.2422-72966_2422-72963delAAGA
  variant of: http://identifiers.org/hgnc/8696
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253731
  ensembl protein: ENSP00000429601
  ensembl transcript: ENST00000517434
  gene symbol: PCDHGA6
  hgvsc: ENST00000517434.1:c.2424+45334_2424+45337delAAGA
  variant of: http://identifiers.org/hgnc/8704
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081853
  ensembl protein: ENSP00000378077
  ensembl transcript: ENST00000394576
  gene symbol: PCDHGA2
  hgvsc: ENST00000394576.2:c.2425-72966_2425-72963delAAGA
  variant of: http://identifiers.org/hgnc/8700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253953
  ensembl protein: ENSP00000428288
  ensembl transcript: ENST00000519479
  gene symbol: PCDHGB4
  hgvsc: ENST00000519479.1:c.2397+31560_2397+31563delAAGA
  variant of: http://identifiers.org/hgnc/8711
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254245
  ensembl protein: ENSP00000253812
  ensembl transcript: ENST00000253812
  gene symbol: PCDHGA3
  hgvsc: ENST00000253812.6:c.2425-72966_2425-72963delAAGA
  variant of: http://identifiers.org/hgnc/8701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254122
  ensembl protein: ENSP00000381594
  ensembl transcript: ENST00000398594
  gene symbol: PCDHGB7
  hgvsc: ENST00000398594.2:c.2415+1567_2415+1570delAAGA
  variant of: http://identifiers.org/hgnc/8714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261934
  ensembl protein: ENSP00000460274
  ensembl transcript: ENST00000573521
  gene symbol: PCDHGA9
  hgvsc: ENST00000573521.1:c.2424+16465_2424+16468delAAGA
  variant of: http://identifiers.org/hgnc/8707
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 29143
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Lys205ArgfsTer11
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Other
population: Latino
population: African
population: East Asian
population: European (Finnish)
reference allele: GAGAA
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: DP

5-140801410-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140801410
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140801410
    reference: chr 5
allele count: 1
allele frequency: 8.341675008341675e-6
allele num: 119880
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253846
  ensembl protein: ENSP00000381611
  ensembl transcript: ENST00000398610
  gene symbol: PCDHGA10
  hgvsc: ENST00000398610.2:c.2436+6232G>C
  variant of: http://identifiers.org/hgnc/8697
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000381589
  ensembl transcript: ENST00000398587
  gene symbol: PCDHGA11
  hgvsc: ENST00000398587.2:c.616G>C
  hgvsp: ENSP00000381589.2:p.Glu206Gln
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254122
  ensembl protein: ENSP00000381594
  ensembl transcript: ENST00000398594
  gene symbol: PCDHGB7
  hgvsc: ENST00000398594.2:c.2415+1569G>C
  variant of: http://identifiers.org/hgnc/8714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204956
  ensembl protein: ENSP00000431083
  ensembl transcript: ENST00000517417
  gene symbol: PCDHGA1
  hgvsc: ENST00000517417.1:c.2422-72964G>C
  variant of: http://identifiers.org/hgnc/8696
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253910
  ensembl protein: ENSP00000429018
  ensembl transcript: ENST00000522605
  gene symbol: PCDHGB2
  hgvsc: ENST00000522605.1:c.2421+59287G>C
  variant of: http://identifiers.org/hgnc/8709
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000428333
  ensembl transcript: ENST00000518882
  gene symbol: PCDHGA11
  hgvsc: ENST00000518882.1:c.616G>C
  hgvsp: ENSP00000428333.1:p.Glu206Gln
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253537
  ensembl protein: ENSP00000430024
  ensembl transcript: ENST00000518325
  gene symbol: PCDHGA7
  hgvsc: ENST00000518325.1:c.2424+36520G>C
  variant of: http://identifiers.org/hgnc/8705
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253731
  ensembl protein: ENSP00000429601
  ensembl transcript: ENST00000517434
  gene symbol: PCDHGA6
  hgvsc: ENST00000517434.1:c.2424+45336G>C
  variant of: http://identifiers.org/hgnc/8704
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262576
  ensembl protein: ENSP00000458570
  ensembl transcript: ENST00000571252
  gene symbol: PCDHGA4
  hgvsc: ENST00000571252.1:c.2421+64222G>C
  variant of: http://identifiers.org/hgnc/8702
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253485
  ensembl protein: ENSP00000429834
  ensembl transcript: ENST00000518069
  gene symbol: PCDHGA5
  hgvsc: ENST00000518069.1:c.2421+55092G>C
  variant of: http://identifiers.org/hgnc/8703
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262209
  ensembl protein: ENSP00000461862
  ensembl transcript: ENST00000576222
  gene symbol: PCDHGB3
  hgvsc: ENST00000576222.1:c.2415+49034G>C
  variant of: http://identifiers.org/hgnc/8710
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261934
  ensembl protein: ENSP00000460274
  ensembl transcript: ENST00000573521
  gene symbol: PCDHGA9
  hgvsc: ENST00000573521.1:c.2424+16467G>C
  variant of: http://identifiers.org/hgnc/8707
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254221
  ensembl protein: ENSP00000429273
  ensembl transcript: ENST00000523390
  gene symbol: PCDHGB1
  hgvsc: ENST00000523390.1:c.2409+69174G>C
  variant of: http://identifiers.org/hgnc/8708
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081853
  ensembl protein: ENSP00000378077
  ensembl transcript: ENST00000394576
  gene symbol: PCDHGA2
  hgvsc: ENST00000394576.2:c.2425-72964G>C
  variant of: http://identifiers.org/hgnc/8700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254245
  ensembl protein: ENSP00000253812
  ensembl transcript: ENST00000253812
  gene symbol: PCDHGA3
  hgvsc: ENST00000253812.6:c.2425-72964G>C
  variant of: http://identifiers.org/hgnc/8701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253953
  ensembl protein: ENSP00000428288
  ensembl transcript: ENST00000519479
  gene symbol: PCDHGB4
  hgvsc: ENST00000519479.1:c.2397+31562G>C
  variant of: http://identifiers.org/hgnc/8711
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253767
  ensembl protein: ENSP00000381605
  ensembl transcript: ENST00000398604
  gene symbol: PCDHGA8
  hgvsc: ENST00000398604.2:c.2424+26606G>C
  variant of: http://identifiers.org/hgnc/8706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253305
  ensembl protein: ENSP00000428603
  ensembl transcript: ENST00000520790
  gene symbol: PCDHGB6
  hgvsc: ENST00000520790.1:c.2418+11223G>C
  variant of: http://identifiers.org/hgnc/8713
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29068
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu206Gln
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum

5-140801412-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140801412
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140801412
    reference: chr 5
allele count: 3
allele frequency: 2.502460753073856e-5
allele num: 119882
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254221
  ensembl protein: ENSP00000429273
  ensembl transcript: ENST00000523390
  gene symbol: PCDHGB1
  hgvsc: ENST00000523390.1:c.2409+69176G>C
  variant of: http://identifiers.org/hgnc/8708
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081853
  ensembl protein: ENSP00000378077
  ensembl transcript: ENST00000394576
  gene symbol: PCDHGA2
  hgvsc: ENST00000394576.2:c.2425-72962G>C
  variant of: http://identifiers.org/hgnc/8700
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000428333
  ensembl transcript: ENST00000518882
  gene symbol: PCDHGA11
  hgvsc: ENST00000518882.1:c.618G>C
  hgvsp: ENSP00000428333.1:p.Glu206Asp
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253537
  ensembl protein: ENSP00000430024
  ensembl transcript: ENST00000518325
  gene symbol: PCDHGA7
  hgvsc: ENST00000518325.1:c.2424+36522G>C
  variant of: http://identifiers.org/hgnc/8705
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253846
  ensembl protein: ENSP00000381611
  ensembl transcript: ENST00000398610
  gene symbol: PCDHGA10
  hgvsc: ENST00000398610.2:c.2436+6234G>C
  variant of: http://identifiers.org/hgnc/8697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253767
  ensembl protein: ENSP00000381605
  ensembl transcript: ENST00000398604
  gene symbol: PCDHGA8
  hgvsc: ENST00000398604.2:c.2424+26608G>C
  variant of: http://identifiers.org/hgnc/8706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204956
  ensembl protein: ENSP00000431083
  ensembl transcript: ENST00000517417
  gene symbol: PCDHGA1
  hgvsc: ENST00000517417.1:c.2422-72962G>C
  variant of: http://identifiers.org/hgnc/8696
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253910
  ensembl protein: ENSP00000429018
  ensembl transcript: ENST00000522605
  gene symbol: PCDHGB2
  hgvsc: ENST00000522605.1:c.2421+59289G>C
  variant of: http://identifiers.org/hgnc/8709
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262209
  ensembl protein: ENSP00000461862
  ensembl transcript: ENST00000576222
  gene symbol: PCDHGB3
  hgvsc: ENST00000576222.1:c.2415+49036G>C
  variant of: http://identifiers.org/hgnc/8710
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000381589
  ensembl transcript: ENST00000398587
  gene symbol: PCDHGA11
  hgvsc: ENST00000398587.2:c.618G>C
  hgvsp: ENSP00000381589.2:p.Glu206Asp
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253485
  ensembl protein: ENSP00000429834
  ensembl transcript: ENST00000518069
  gene symbol: PCDHGA5
  hgvsc: ENST00000518069.1:c.2421+55094G>C
  variant of: http://identifiers.org/hgnc/8703
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253305
  ensembl protein: ENSP00000428603
  ensembl transcript: ENST00000520790
  gene symbol: PCDHGB6
  hgvsc: ENST00000520790.1:c.2418+11225G>C
  variant of: http://identifiers.org/hgnc/8713
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253731
  ensembl protein: ENSP00000429601
  ensembl transcript: ENST00000517434
  gene symbol: PCDHGA6
  hgvsc: ENST00000517434.1:c.2424+45338G>C
  variant of: http://identifiers.org/hgnc/8704
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254122
  ensembl protein: ENSP00000381594
  ensembl transcript: ENST00000398594
  gene symbol: PCDHGB7
  hgvsc: ENST00000398594.2:c.2415+1571G>C
  variant of: http://identifiers.org/hgnc/8714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261934
  ensembl protein: ENSP00000460274
  ensembl transcript: ENST00000573521
  gene symbol: PCDHGA9
  hgvsc: ENST00000573521.1:c.2424+16469G>C
  variant of: http://identifiers.org/hgnc/8707
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254245
  ensembl protein: ENSP00000253812
  ensembl transcript: ENST00000253812
  gene symbol: PCDHGA3
  hgvsc: ENST00000253812.6:c.2425-72962G>C
  variant of: http://identifiers.org/hgnc/8701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253953
  ensembl protein: ENSP00000428288
  ensembl transcript: ENST00000519479
  gene symbol: PCDHGB4
  hgvsc: ENST00000519479.1:c.2397+31564G>C
  variant of: http://identifiers.org/hgnc/8711
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262576
  ensembl protein: ENSP00000458570
  ensembl transcript: ENST00000571252
  gene symbol: PCDHGA4
  hgvsc: ENST00000571252.1:c.2421+64224G>C
  variant of: http://identifiers.org/hgnc/8702
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1400
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 576
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu206Asp
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum

5-140801415-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140801415
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140801415
    reference: chr 5
allele count: 2
allele frequency: 1.668641225450116e-5
allele num: 119858
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254221
  ensembl protein: ENSP00000429273
  ensembl transcript: ENST00000523390
  gene symbol: PCDHGB1
  hgvsc: ENST00000523390.1:c.2409+69179T>C
  variant of: http://identifiers.org/hgnc/8708
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253846
  ensembl protein: ENSP00000381611
  ensembl transcript: ENST00000398610
  gene symbol: PCDHGA10
  hgvsc: ENST00000398610.2:c.2436+6237T>C
  variant of: http://identifiers.org/hgnc/8697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254245
  ensembl protein: ENSP00000253812
  ensembl transcript: ENST00000253812
  gene symbol: PCDHGA3
  hgvsc: ENST00000253812.6:c.2425-72959T>C
  variant of: http://identifiers.org/hgnc/8701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254122
  ensembl protein: ENSP00000381594
  ensembl transcript: ENST00000398594
  gene symbol: PCDHGB7
  hgvsc: ENST00000398594.2:c.2415+1574T>C
  variant of: http://identifiers.org/hgnc/8714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253537
  ensembl protein: ENSP00000430024
  ensembl transcript: ENST00000518325
  gene symbol: PCDHGA7
  hgvsc: ENST00000518325.1:c.2424+36525T>C
  variant of: http://identifiers.org/hgnc/8705
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261934
  ensembl protein: ENSP00000460274
  ensembl transcript: ENST00000573521
  gene symbol: PCDHGA9
  hgvsc: ENST00000573521.1:c.2424+16472T>C
  variant of: http://identifiers.org/hgnc/8707
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253731
  ensembl protein: ENSP00000429601
  ensembl transcript: ENST00000517434
  gene symbol: PCDHGA6
  hgvsc: ENST00000517434.1:c.2424+45341T>C
  variant of: http://identifiers.org/hgnc/8704
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262209
  ensembl protein: ENSP00000461862
  ensembl transcript: ENST00000576222
  gene symbol: PCDHGB3
  hgvsc: ENST00000576222.1:c.2415+49039T>C
  variant of: http://identifiers.org/hgnc/8710
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081853
  ensembl protein: ENSP00000378077
  ensembl transcript: ENST00000394576
  gene symbol: PCDHGA2
  hgvsc: ENST00000394576.2:c.2425-72959T>C
  variant of: http://identifiers.org/hgnc/8700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204956
  ensembl protein: ENSP00000431083
  ensembl transcript: ENST00000517417
  gene symbol: PCDHGA1
  hgvsc: ENST00000517417.1:c.2422-72959T>C
  variant of: http://identifiers.org/hgnc/8696
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000381589
  ensembl transcript: ENST00000398587
  gene symbol: PCDHGA11
  hgvsc: ENST00000398587.2:c.621T>C
  hgvsp: ENST00000398587.2:c.621T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253305
  ensembl protein: ENSP00000428603
  ensembl transcript: ENST00000520790
  gene symbol: PCDHGB6
  hgvsc: ENST00000520790.1:c.2418+11228T>C
  variant of: http://identifiers.org/hgnc/8713
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262576
  ensembl protein: ENSP00000458570
  ensembl transcript: ENST00000571252
  gene symbol: PCDHGA4
  hgvsc: ENST00000571252.1:c.2421+64227T>C
  variant of: http://identifiers.org/hgnc/8702
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000428333
  ensembl transcript: ENST00000518882
  gene symbol: PCDHGA11
  hgvsc: ENST00000518882.1:c.621T>C
  hgvsp: ENST00000518882.1:c.621T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253485
  ensembl protein: ENSP00000429834
  ensembl transcript: ENST00000518069
  gene symbol: PCDHGA5
  hgvsc: ENST00000518069.1:c.2421+55097T>C
  variant of: http://identifiers.org/hgnc/8703
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253767
  ensembl protein: ENSP00000381605
  ensembl transcript: ENST00000398604
  gene symbol: PCDHGA8
  hgvsc: ENST00000398604.2:c.2424+26611T>C
  variant of: http://identifiers.org/hgnc/8706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253910
  ensembl protein: ENSP00000429018
  ensembl transcript: ENST00000522605
  gene symbol: PCDHGB2
  hgvsc: ENST00000522605.1:c.2421+59292T>C
  variant of: http://identifiers.org/hgnc/8709
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253953
  ensembl protein: ENSP00000428288
  ensembl transcript: ENST00000519479
  gene symbol: PCDHGB4
  hgvsc: ENST00000519479.1:c.2397+31567T>C
  variant of: http://identifiers.org/hgnc/8711
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 577
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 547
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29049
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala207Ala
num of homozygotes: 0
population: Latino
population: African
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD

5-140801418-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 140801418
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 140801418
    reference: chr 5
allele count: 1
allele frequency: 8.342231713828083e-6
allele num: 119872
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253537
  ensembl protein: ENSP00000430024
  ensembl transcript: ENST00000518325
  gene symbol: PCDHGA7
  hgvsc: ENST00000518325.1:c.2424+36528T>A
  variant of: http://identifiers.org/hgnc/8705
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000381589
  ensembl transcript: ENST00000398587
  gene symbol: PCDHGA11
  hgvsc: ENST00000398587.2:c.624T>A
  hgvsp: ENST00000398587.2:c.624T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253846
  ensembl protein: ENSP00000381611
  ensembl transcript: ENST00000398610
  gene symbol: PCDHGA10
  hgvsc: ENST00000398610.2:c.2436+6240T>A
  variant of: http://identifiers.org/hgnc/8697
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254245
  ensembl protein: ENSP00000253812
  ensembl transcript: ENST00000253812
  gene symbol: PCDHGA3
  hgvsc: ENST00000253812.6:c.2425-72956T>A
  variant of: http://identifiers.org/hgnc/8701
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000204956
  ensembl protein: ENSP00000431083
  ensembl transcript: ENST00000517417
  gene symbol: PCDHGA1
  hgvsc: ENST00000517417.1:c.2422-72956T>A
  variant of: http://identifiers.org/hgnc/8696
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000081853
  ensembl protein: ENSP00000378077
  ensembl transcript: ENST00000394576
  gene symbol: PCDHGA2
  hgvsc: ENST00000394576.2:c.2425-72956T>A
  variant of: http://identifiers.org/hgnc/8700
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253485
  ensembl protein: ENSP00000429834
  ensembl transcript: ENST00000518069
  gene symbol: PCDHGA5
  hgvsc: ENST00000518069.1:c.2421+55100T>A
  variant of: http://identifiers.org/hgnc/8703
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262209
  ensembl protein: ENSP00000461862
  ensembl transcript: ENST00000576222
  gene symbol: PCDHGB3
  hgvsc: ENST00000576222.1:c.2415+49042T>A
  variant of: http://identifiers.org/hgnc/8710
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254122
  ensembl protein: ENSP00000381594
  ensembl transcript: ENST00000398594
  gene symbol: PCDHGB7
  hgvsc: ENST00000398594.2:c.2415+1577T>A
  variant of: http://identifiers.org/hgnc/8714
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253731
  ensembl protein: ENSP00000429601
  ensembl transcript: ENST00000517434
  gene symbol: PCDHGA6
  hgvsc: ENST00000517434.1:c.2424+45344T>A
  variant of: http://identifiers.org/hgnc/8704
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253953
  ensembl protein: ENSP00000428288
  ensembl transcript: ENST00000519479
  gene symbol: PCDHGB4
  hgvsc: ENST00000519479.1:c.2397+31570T>A
  variant of: http://identifiers.org/hgnc/8711
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000261934
  ensembl protein: ENSP00000460274
  ensembl transcript: ENST00000573521
  gene symbol: PCDHGA9
  hgvsc: ENST00000573521.1:c.2424+16475T>A
  variant of: http://identifiers.org/hgnc/8707
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253910
  ensembl protein: ENSP00000429018
  ensembl transcript: ENST00000522605
  gene symbol: PCDHGB2
  hgvsc: ENST00000522605.1:c.2421+59295T>A
  variant of: http://identifiers.org/hgnc/8709
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000262576
  ensembl protein: ENSP00000458570
  ensembl transcript: ENST00000571252
  gene symbol: PCDHGA4
  hgvsc: ENST00000571252.1:c.2421+64230T>A
  variant of: http://identifiers.org/hgnc/8702
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000253873
  ensembl protein: ENSP00000428333
  ensembl transcript: ENST00000518882
  gene symbol: PCDHGA11
  hgvsc: ENST00000518882.1:c.624T>A
  hgvsp: ENST00000518882.1:c.624T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/8698
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000254221
  ensembl protein: ENSP00000429273
  ensembl transcript: ENST00000523390
  gene symbol: PCDHGB1
  hgvsc: ENST00000523390.1:c.2409+69182T>A
  variant of: http://identifiers.org/hgnc/8708
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253767
  ensembl protein: ENSP00000381605
  ensembl transcript: ENST00000398604
  gene symbol: PCDHGA8
  hgvsc: ENST00000398604.2:c.2424+26614T>A
  variant of: http://identifiers.org/hgnc/8706
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000253305
  ensembl protein: ENSP00000428603
  ensembl transcript: ENST00000520790
  gene symbol: PCDHGB6
  hgvsc: ENST00000520790.1:c.2418+11231T>A
  variant of: http://identifiers.org/hgnc/8713
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5420
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala208Ala
num of homozygotes: 0
reference allele: T

GenotypeDepth
all individuals: 33284
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 100
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 13
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 42
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 515
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 17823
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 289
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1031
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1082
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 432
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1299
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 188
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 43
bin: 9.75e1
variant carriers: 1

GenotypeDepth
all individuals: 30
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4094
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 553
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 298
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1408
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 368
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 191
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 435
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1719
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45434
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5681
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1044
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 414
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 692
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1252
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 337
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 198
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 340
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11520
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.512447442451375e-5
allele num: 66118
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9718
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8566
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 9.0742e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.901e0

MQ
type: SiteQuality
SIO_000300: 3.645e1

MQRankSum
type: SiteQuality
SIO_000300: -8.439e0

DP
type: SiteQuality
SIO_000300: 1.485595e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -4.672e1

QD
type: SiteQuality
SIO_000300: 3.28e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.004e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.58e0

GenotypeDepth
all individuals: 1192
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 30
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4092
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 290
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 33069
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 108
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 42
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1432
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 460
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 50
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 12
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 521
bin: 4.25e1
variant carriers: 1

GenotypeDepth
all individuals: 188
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 42
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 13
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 252
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 326
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1253
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 463
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 685
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 507
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 367
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 622
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44879
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 334
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1135
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 464
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 336
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1693
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5629
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1395
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66064
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11506
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.058403004967891e-5
allele num: 16506
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8556
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9710
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.496e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.16e0

QD
type: SiteQuality
SIO_000300: 1.231e1

MQRankSum
type: SiteQuality
SIO_000300: 8.500000000000001e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 9.2e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.34e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.3e-2

DP
type: SiteQuality
SIO_000300: 1.482838e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
all individuals: 507
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2802
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 42
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 59
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 89
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 189
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 50
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2593
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1048
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 16966
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3788
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 31213
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 31
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 42
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 13
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 917
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5306
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1841
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 327
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 725
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1142
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 356
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1303
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1296
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 700
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1248
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 521
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42024
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1605
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 326
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 654
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9666
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6592
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11454
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8518
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.518602885345482e-5
allele num: 65850
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.78e0

QD
type: SiteQuality
SIO_000300: 1.278e1

MQ
type: SiteQuality
SIO_000300: 5.871e1

FS
type: SiteQuality
SIO_000300: 1.615e0

DP
type: SiteQuality
SIO_000300: 1.453262e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.01e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.51e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.684e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.48e-1

GenotypeDepth
all individuals: 13
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2918
bin: 1.75e1
variant carriers: 1

GenotypeDepth
all individuals: 189
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 90
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 42
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 59
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 17
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 625
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1050
bin: 3.75e1
variant carriers: 2

GenotypeDepth
all individuals: 2652
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 16896
bin: 2.75e1
variant carriers: 1

GenotypeDepth
all individuals: 42
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 50
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 100
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 289
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 32
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1871
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1288
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 326
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 783
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1356
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41766
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1199
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 944
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1248
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 1592
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 363
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 653
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 733
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 558
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5274
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 328
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.037574800279457e-5
allele num: 65842
num of homozygotes: 1

East Asian
type: Population
allele count: 4
allele frequency: 4.699248120300752e-4
allele num: 8512
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11444
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9664
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.4e-3

VQSLOD
type: SiteQuality
SIO_000300: 6.36e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.81e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.919e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.34e-1

DP
type: SiteQuality
SIO_000300: 1.451772e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.7e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 2.69e0

GenotypeDepth
all individuals: 3707
bin: 3.25e1
variant carriers: 1

GenotypeDepth
all individuals: 188
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 504
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 650
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 30473
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 2944
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 16678
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 12
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1049
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 91
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 31
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 17
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 42
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 42
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 13
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1025
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40357
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 983
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1246
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5166
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 635
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1530
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 646
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1419
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 324
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 728
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2022
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1547
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 324
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1235
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1067
bin: 2.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65812
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.738203425375742e-5
allele num: 11444
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8494
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9652
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16484
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.913e0

ClippingRankSum
type: SiteQuality
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MQ
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ReadPosRankSum
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BaseQRankSum
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FS
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InbreedingCoeff
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SIO_000300: -1.2e-3

QD
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VQSLOD
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DP
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SIO_000300: 1.443634e6

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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Other
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European (Finnish)
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South Asian
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European (Non-Finnish)
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African
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InbreedingCoeff
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BaseQRankSum
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ReadPosRankSum
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DP
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MQRankSum
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VQSLOD
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FS
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MQ
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ClippingRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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European (Non-Finnish)
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South Asian
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Latino
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European (Finnish)
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Other
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VQSLOD
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FS
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MQ
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MQRankSum
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QD
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InbreedingCoeff
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BaseQRankSum
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DP
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ClippingRankSum
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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South Asian
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East Asian
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Latino
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European (Finnish)
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Other
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European (Non-Finnish)
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BaseQRankSum
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MQRankSum
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ReadPosRankSum
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MQ
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FS
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QD
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DP
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VQSLOD
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ClippingRankSum
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InbreedingCoeff
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Finnish)
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Other
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East Asian
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Latino
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European (Non-Finnish)
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MQRankSum
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FS
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BaseQRankSum
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ClippingRankSum
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InbreedingCoeff
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MQ
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VQSLOD
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DP
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ReadPosRankSum
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QD
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GenotypeQuality
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East Asian
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Latino
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European (Non-Finnish)
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African
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European (Finnish)
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South Asian
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MQRankSum
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ClippingRankSum
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MQ
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VQSLOD
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DP
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ReadPosRankSum
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FS
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InbreedingCoeff
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BaseQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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African
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East Asian
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South Asian
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European (Non-Finnish)
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Other
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VQSLOD
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InbreedingCoeff
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MQRankSum
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BaseQRankSum
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FS
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QD
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MQ
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ReadPosRankSum
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ClippingRankSum
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Non-Finnish)
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European (Finnish)
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African
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South Asian
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Other
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Latino
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FS
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ClippingRankSum
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BaseQRankSum
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ReadPosRankSum
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MQRankSum
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InbreedingCoeff
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QD
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DP
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MQ
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VQSLOD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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num of homozygotes: 0

Other
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European (Finnish)
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European (Non-Finnish)
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African
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South Asian
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Latino
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BaseQRankSum
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SIO_000300: -1.55e-1

ReadPosRankSum
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InbreedingCoeff
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VQSLOD
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MQRankSum
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MQ
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ClippingRankSum
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FS
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QD
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Latino
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Other
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European (Finnish)
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South Asian
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European (Non-Finnish)
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East Asian
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FS
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ClippingRankSum
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MQ
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InbreedingCoeff
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MQRankSum
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VQSLOD
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QD
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ReadPosRankSum
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BaseQRankSum
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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European (Finnish)
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European (Non-Finnish)
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Latino
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South Asian
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Other
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FS
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BaseQRankSum
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ReadPosRankSum
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QD
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VQSLOD
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DP
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MQ
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MQRankSum
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ClippingRankSum
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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Latino
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European (Finnish)
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African
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East Asian
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BaseQRankSum
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ClippingRankSum
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MQRankSum
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DP
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QD
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FS
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InbreedingCoeff
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VQSLOD
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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East Asian
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African
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European (Finnish)
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South Asian
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MQ
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DP
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InbreedingCoeff
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QD
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BaseQRankSum
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ClippingRankSum
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MQRankSum
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FS
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VQSLOD
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ReadPosRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Finnish)
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European (Non-Finnish)
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South Asian
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East Asian
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DP
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ReadPosRankSum
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FS
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ClippingRankSum
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MQ
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MQRankSum
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VQSLOD
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BaseQRankSum
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InbreedingCoeff
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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South Asian
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African
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East Asian
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Other
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European (Finnish)
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DP
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ClippingRankSum
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MQ
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VQSLOD
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FS
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MQRankSum
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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European (Finnish)
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European (Non-Finnish)
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VQSLOD
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FS
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DP
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MQ
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South Asian
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European (Finnish)
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Latino
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East Asian
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European (Non-Finnish)
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VQSLOD
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QD
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DP
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MQRankSum
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FS
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Other
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European (Non-Finnish)
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South Asian
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European (Finnish)
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East Asian
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InbreedingCoeff
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FS
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BaseQRankSum
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DP
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QD
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VQSLOD
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ClippingRankSum
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MQRankSum
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ReadPosRankSum
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Non-Finnish)
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European (Finnish)
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Other
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African
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South Asian
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VQSLOD
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MQ
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BaseQRankSum
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MQRankSum
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InbreedingCoeff
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ClippingRankSum
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DP
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ReadPosRankSum
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FS
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Latino
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South Asian
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Other
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European (Non-Finnish)
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East Asian
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European (Finnish)
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InbreedingCoeff
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ReadPosRankSum
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FS
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MQ
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VQSLOD
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MQRankSum
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DP
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QD
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BaseQRankSum
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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European (Non-Finnish)
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Latino
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European (Finnish)
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South Asian
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ReadPosRankSum
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QD
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MQRankSum
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VQSLOD
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DP
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FS
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MQ
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ClippingRankSum
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InbreedingCoeff
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BaseQRankSum
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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South Asian
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African
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European (Non-Finnish)
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European (Finnish)
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Latino
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VQSLOD
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MQRankSum
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FS
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DP
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QD
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ClippingRankSum
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InbreedingCoeff
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MQ
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ReadPosRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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East Asian
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African
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South Asian
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VQSLOD
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BaseQRankSum
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ClippingRankSum
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DP
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InbreedingCoeff
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QD
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FS
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MQRankSum
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MQ
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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South Asian
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East Asian
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European (Finnish)
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Latino
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European (Non-Finnish)
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InbreedingCoeff
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MQRankSum
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VQSLOD
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FS
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DP
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ReadPosRankSum
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ClippingRankSum
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MQ
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BaseQRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Non-Finnish)
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African
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South Asian
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European (Finnish)
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Other
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Latino
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MQRankSum
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VQSLOD
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ReadPosRankSum
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ClippingRankSum
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InbreedingCoeff
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BaseQRankSum
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MQ
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FS
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QD
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Non-Finnish)
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European (Finnish)
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East Asian
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Latino
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South Asian
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VQSLOD
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ReadPosRankSum
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BaseQRankSum
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ClippingRankSum
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DP
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InbreedingCoeff
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MQ
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QD
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FS
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Latino
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East Asian
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South Asian
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European (Finnish)
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European (Non-Finnish)
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QD
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ReadPosRankSum
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FS
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MQRankSum
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ClippingRankSum
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MQ
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VQSLOD
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InbreedingCoeff
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BaseQRankSum
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DP
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European (Finnish)
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European (Non-Finnish)
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South Asian
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Latino
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East Asian
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African
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InbreedingCoeff
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QD
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BaseQRankSum
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ReadPosRankSum
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MQ
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MQRankSum
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ClippingRankSum
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DP
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VQSLOD
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FS
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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variant carriers: 5

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 49

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 1042
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variant carriers: 0

GenotypeQuality
all individuals: 591
bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 53
allele frequency: 3.223452134776791e-3
allele num: 16442
num of homozygotes: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9670
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66236
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11464
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.164958061509786e-4
allele num: 8584
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.97e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.71e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.52e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.33e-2

ReadPosRankSum
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FS
type: SiteQuality
SIO_000300: 1.144e0

VQSLOD
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SIO_000300: 2.24e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.488674e6

QD
type: SiteQuality
SIO_000300: 1.105e1

GenotypeDepth
all individuals: 50
bin: 6.75e1
variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 13
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 905
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16438
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11468
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.165229550221394e-4
allele num: 8582
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9666
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66206
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.2e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -7.92e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.9e-1

VQSLOD
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SIO_000300: 3.65e0

DP
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SIO_000300: 1.491022e6

MQ
type: SiteQuality
SIO_000300: 5.936e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.73e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.2e-2

QD
type: SiteQuality
SIO_000300: 1.214e1

GenotypeDepth
all individuals: 4265
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variant carriers: 0

GenotypeDepth
all individuals: 1280
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1289
bin: 9.75e1
variant carriers: 2

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8582
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16438
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11468
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.069108214359611e-4
allele num: 9666
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66206
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.936e1

VQSLOD
type: SiteQuality
SIO_000300: 3.65e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.2e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 3.2e-2

QD
type: SiteQuality
SIO_000300: 1.214e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.73e-1

DP
type: SiteQuality
SIO_000300: 1.491022e6

BaseQRankSum
type: SiteQuality
SIO_000300: -7.92e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.9e-1

GenotypeDepth
all individuals: 294
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variant carriers: 0

GenotypeDepth
all individuals: 12
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variant carriers: 0

GenotypeDepth
all individuals: 42
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variant carriers: 0

GenotypeDepth
all individuals: 30
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
all individuals: 1151
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeQuality
all individuals: 13
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variant carriers: 0

GenotypeQuality
all individuals: 43261
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 534
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variant carriers: 0

GenotypeQuality
all individuals: 1992
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16444
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8584
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11470
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9662
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.510254628930438e-5
allele num: 66214
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -5.375e-1

QD
type: SiteQuality
SIO_000300: 1.367e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.826e0

MQRankSum
type: SiteQuality
SIO_000300: 1.42e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.83e-1

FS
type: SiteQuality
SIO_000300: 8.852e0

ReadPosRankSum
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SIO_000300: 1.48e0

DP
type: SiteQuality
SIO_000300: 1.492485e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
all individuals: 51
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variant carriers: 2

GenotypeDepth
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variant carriers: 9

GenotypeDepth
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variant carriers: 1277

GenotypeDepth
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variant carriers: 360

GenotypeDepth
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variant carriers: 1789

GenotypeDepth
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variant carriers: 33

GenotypeDepth
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variant carriers: 2025

GenotypeDepth
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variant carriers: 550

GenotypeDepth
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variant carriers: 1787

GenotypeDepth
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variant carriers: 254

GenotypeDepth
all individuals: 75
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variant carriers: 74

GenotypeDepth
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GenotypeDepth
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variant carriers: 877

GenotypeDepth
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variant carriers: 89

GenotypeDepth
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variant carriers: 578

GenotypeQuality
all individuals: 4407
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variant carriers: 41

GenotypeQuality
all individuals: 31
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variant carriers: 7

GenotypeQuality
all individuals: 432
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variant carriers: 57

GenotypeQuality
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GenotypeQuality
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variant carriers: 36

GenotypeQuality
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variant carriers: 40

GenotypeQuality
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variant carriers: 11

GenotypeQuality
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variant carriers: 15

GenotypeQuality
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GenotypeQuality
all individuals: 930
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variant carriers: 43

GenotypeQuality
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variant carriers: 37

GenotypeQuality
all individuals: 487
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variant carriers: 17

GenotypeQuality
all individuals: 754
bin: 5.25e1
variant carriers: 34

GenotypeQuality
all individuals: 343
bin: 4.25e1
variant carriers: 16

GenotypeQuality
all individuals: 687
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GenotypeQuality
all individuals: 11009
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variant carriers: 10796

GenotypeQuality
all individuals: 167
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variant carriers: 62

GenotypeQuality
all individuals: 499
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variant carriers: 9

GenotypeQuality
all individuals: 424
bin: 2.75e1
variant carriers: 11

GenotypeQuality
all individuals: 544
bin: 4.75e1
variant carriers: 36

African
type: Population
allele count: 1695
allele frequency: 1.749948379103861e-1
allele num: 9686
num of homozygotes: 146

Latino
type: Population
allele count: 1693
allele frequency: 1.478602620087336e-1
allele num: 11450
num of homozygotes: 134

Other
type: Population
allele count: 87
allele frequency: 9.775280898876404e-2
allele num: 890
num of homozygotes: 4

South Asian
type: Population
allele count: 1900
allele frequency: 1.155155642023346e-1
allele num: 16448
num of homozygotes: 111

East Asian
type: Population
allele count: 948
allele frequency: 1.104122990915444e-1
allele num: 8586
num of homozygotes: 52

European (Non-Finnish)
type: Population
allele count: 5226
allele frequency: 7.892829094423971e-2
allele num: 66212
num of homozygotes: 218

European (Finnish)
type: Population
allele count: 387
allele frequency: 5.858310626702997e-2
allele num: 6606
num of homozygotes: 6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.89e-1

DP
type: SiteQuality
SIO_000300: 1.591969e6

MQRankSum
type: SiteQuality
SIO_000300: 1.06e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.69e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.493e0

MQ
type: SiteQuality
SIO_000300: 5.964e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.8e-2

FS
type: SiteQuality
SIO_000300: 5.22e-1

QD
type: SiteQuality
SIO_000300: 1.322e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.01e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
all individuals: 537
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GenotypeQuality
all individuals: 63
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GenotypeQuality
all individuals: 675
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GenotypeQuality
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GenotypeQuality
all individuals: 43341
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GenotypeQuality
all individuals: 600
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GenotypeQuality
all individuals: 11
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GenotypeQuality
all individuals: 5
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GenotypeQuality
all individuals: 249
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GenotypeQuality
all individuals: 351
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GenotypeQuality
all individuals: 22
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GenotypeQuality
all individuals: 889
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GenotypeQuality
all individuals: 1708
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GenotypeQuality
all individuals: 419
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GenotypeQuality
all individuals: 437
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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European (Finnish)
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South Asian
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European (Non-Finnish)
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Latino
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East Asian
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ReadPosRankSum
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VQSLOD
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MQRankSum
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MQ
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FS
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DP
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InbreedingCoeff
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SIO_000300: 2.2e-3

QD
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ClippingRankSum
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BaseQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
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Other
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South Asian
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African
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European (Non-Finnish)
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East Asian
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Latino
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DP
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VQSLOD
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InbreedingCoeff
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ReadPosRankSum
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MQRankSum
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QD
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FS
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MQ
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SIO_000300: 5.942e1

ClippingRankSum
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SIO_000300: -2.3e-1

BaseQRankSum
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SIO_000300: -1.618e0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

East Asian
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allele num: 8590
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European (Non-Finnish)
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Other
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
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DP
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ReadPosRankSum
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MQ
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QD
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BaseQRankSum
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ClippingRankSum
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VQSLOD
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FS
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MQRankSum
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SIO_000300: -9.74e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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East Asian
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European (Finnish)
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South Asian
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allele num: 16446
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Other
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Latino
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ClippingRankSum
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BaseQRankSum
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InbreedingCoeff
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DP
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FS
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MQ
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MQRankSum
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VQSLOD
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ReadPosRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 1
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allele num: 66264
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European (Finnish)
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African
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Latino
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East Asian
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Other
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South Asian
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MQRankSum
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BaseQRankSum
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FS
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VQSLOD
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InbreedingCoeff
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MQ
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ClippingRankSum
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ReadPosRankSum
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DP
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QD
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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South Asian
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Other
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East Asian
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European (Non-Finnish)
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allele count: 0
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European (Finnish)
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InbreedingCoeff
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FS
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ReadPosRankSum
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DP
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MQRankSum
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BaseQRankSum
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VQSLOD
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ClippingRankSum
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MQ
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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Latino
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Other
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European (Finnish)
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South Asian
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African
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ClippingRankSum
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VQSLOD
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ReadPosRankSum
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QD
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DP
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MQ
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MQRankSum
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BaseQRankSum
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InbreedingCoeff
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FS
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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South Asian
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Latino
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European (Finnish)
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Other
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European (Non-Finnish)
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InbreedingCoeff
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FS
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MQRankSum
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MQ
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VQSLOD
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QD
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DP
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BaseQRankSum
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ReadPosRankSum
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ClippingRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Finnish)
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African
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Latino
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Other
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European (Non-Finnish)
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FS
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BaseQRankSum
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MQRankSum
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QD
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ClippingRankSum
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ReadPosRankSum
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MQ
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DP
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VQSLOD
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InbreedingCoeff
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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Other
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African
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Latino
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South Asian
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East Asian
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InbreedingCoeff
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MQ
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QD
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VQSLOD
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BaseQRankSum
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ReadPosRankSum
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FS
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MQRankSum
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ClippingRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Finnish)
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East Asian
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Other
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European (Non-Finnish)
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South Asian
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DP
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BaseQRankSum
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VQSLOD
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MQRankSum
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ReadPosRankSum
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FS
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InbreedingCoeff
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QD
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ClippingRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

South Asian
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allele frequency: 6.075334143377886e-5
allele num: 16460
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

FS
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SIO_000300: 4.364e0

MQRankSum
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BaseQRankSum
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SIO_000300: 3.31e0

VQSLOD
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SIO_000300: -1.157e0

QD
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InbreedingCoeff
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SIO_000300: 1.2e-3

DP
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SIO_000300: 1.528495e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.66e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.445e0

MQ
type: SiteQuality
SIO_000300: 5.737e1

GenotypeDepth
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bin: 6.25e1
variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66256
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 1
allele frequency: 1.126126126126126e-3
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South Asian
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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InbreedingCoeff
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MQ
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MQRankSum
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DP
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VQSLOD
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BaseQRankSum
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ReadPosRankSum
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FS
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SIO_000300: 7.82e-1

ClippingRankSum
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SIO_000300: 9.48e-1

QD
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SIO_000300: 1.29e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.508932882665379e-5
allele num: 66272
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11508
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.530414e6

BaseQRankSum
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SIO_000300: 3.05e0

InbreedingCoeff
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SIO_000300: 1.2e-3

VQSLOD
type: SiteQuality
SIO_000300: 7.41e-1

FS
type: SiteQuality
SIO_000300: 9.54e-1

QD
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SIO_000300: 1.244e1

MQRankSum
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SIO_000300: -5.9e-1

MQ
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SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.4e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.77e0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 2
allele frequency: 1.215214485356665e-4
allele num: 16458
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66262
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9614
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11506
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 888
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BaseQRankSum
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SIO_000300: 1.84e0

VQSLOD
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SIO_000300: 3.4e-2

MQRankSum
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QD
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MQ
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FS
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DP
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InbreedingCoeff
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ClippingRankSum
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66264
num of homozygotes: 0

South Asian
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allele frequency: 6.076072426783327e-5
allele num: 16458
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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African
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11506
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ReadPosRankSum
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SIO_000300: -4.04e-1

VQSLOD
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MQ
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DP
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BaseQRankSum
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MQRankSum
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InbreedingCoeff
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FS
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ClippingRankSum
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QD
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 5
allele frequency: 7.546258565003471e-5
allele num: 66258
num of homozygotes: 0

African
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allele count: 0
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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num of homozygotes: 0

Latino
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East Asian
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VQSLOD
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DP
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ClippingRankSum
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ReadPosRankSum
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MQ
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BaseQRankSum
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MQRankSum
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InbreedingCoeff
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QD
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FS
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SIO_000300: 1.949e0

GenotypeDepth
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variant carriers: 2

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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Latino
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East Asian
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European (Finnish)
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Other
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European (Non-Finnish)
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DP
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FS
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InbreedingCoeff
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ClippingRankSum
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MQRankSum
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QD
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BaseQRankSum
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VQSLOD
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ReadPosRankSum
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MQ
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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South Asian
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European (Non-Finnish)
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East Asian
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European (Finnish)
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Latino
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Other
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QD
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ClippingRankSum
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InbreedingCoeff
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MQ
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DP
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MQRankSum
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ReadPosRankSum
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VQSLOD
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BaseQRankSum
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FS
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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num of homozygotes: 0

Latino
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European (Non-Finnish)
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European (Finnish)
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African
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Other
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South Asian
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FS
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ClippingRankSum
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InbreedingCoeff
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DP
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VQSLOD
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BaseQRankSum
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QD
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MQRankSum
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MQ
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ReadPosRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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num of homozygotes: 0

South Asian
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Other
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Latino
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African
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East Asian
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European (Finnish)
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InbreedingCoeff
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QD
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VQSLOD
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ClippingRankSum
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ReadPosRankSum
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MQRankSum
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FS
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BaseQRankSum
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MQ
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

Latino
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East Asian
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European (Finnish)
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African
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Other
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European (Non-Finnish)
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ClippingRankSum
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MQ
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MQRankSum
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InbreedingCoeff
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DP
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VQSLOD
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FS
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ReadPosRankSum
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QD
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BaseQRankSum
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 424
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 969
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 21
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1695
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 180
bin: 3.25e1
variant carriers: 0

African
type: Population
allele count: 3
allele frequency: 3.126302626094206e-4
allele num: 9596
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66224
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16454
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.32e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.5e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.22e0

VQSLOD
type: SiteQuality
SIO_000300: 1.83e0

DP
type: SiteQuality
SIO_000300: 1.534538e6

QD
type: SiteQuality
SIO_000300: 1.265e1

MQ
type: SiteQuality
SIO_000300: 5.959e1

MQRankSum
type: SiteQuality
SIO_000300: 8.36e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.038e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.88e-1

GenotypeDepth
all individuals: 21955
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 37
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 88
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 133
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 5433
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1398
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 8
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 24
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 419
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 25
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 283
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 56
bin: 6.25e1
variant carriers: 1

GenotypeDepth
all individuals: 17
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 968
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 75
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45898
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 183
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 201
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6533
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 424
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 389
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 889
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2032
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 143
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1693
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 604
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11504
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9596
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8598
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.020600495378481e-5
allele num: 66212
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16450
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.62e0

FS
type: SiteQuality
SIO_000300: 1.528e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.544e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.4e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

MQ
type: SiteQuality
SIO_000300: 5.96e1

DP
type: SiteQuality
SIO_000300: 1.533813e6

MQRankSum
type: SiteQuality
SIO_000300: 4.44e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.32e-1

QD
type: SiteQuality
SIO_000300: 1.278e1

GenotypeDepth
all individuals: 574
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 5
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 420
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 283
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 29070
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 553
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 21981
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 133
bin: 2.5e0
variant carriers: 0

GenotypeDepth
all individuals: 1394
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 37
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 25
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 139
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 259
bin: 1.75e1
variant carriers: 0

GenotypeDepth
all individuals: 17
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 183
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 185
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1694
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 617
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2032
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46020
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 391
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6541
bin: 6.75e1
variant carriers: 0