8-21562669-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21562669
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 21562669
    reference: chr 8
allele count: 32
allele frequency: 3.448275862068965e-4
allele num: 92800
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428518
  ensembl transcript: ENST00000524240
  gene symbol: GFRA2
  hgvsc: ENST00000524240.1:c.905-32C>G
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429206
  ensembl transcript: ENST00000518077
  gene symbol: GFRA2
  hgvsc: ENST00000518077.1:c.506-32C>G
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429979
  ensembl transcript: ENST00000517892
  gene symbol: GFRA2
  hgvsc: ENST00000517892.1:c.590-32C>G
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000306654
  ensembl transcript: ENST00000306793
  gene symbol: GFRA2
  hgvsc: ENST00000306793.4:c.*959-32C>G
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429445
  ensembl transcript: ENST00000517328
  gene symbol: GFRA2
  hgvsc: ENST00000517328.1:c.905-32C>G
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000383592
  ensembl transcript: ENST00000400782
  gene symbol: GFRA2
  hgvsc: ENST00000400782.4:c.590-32C>G
  variant of: http://identifiers.org/hgnc/4244
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10971
  bin: 7.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 10790
  bin: 1.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9950
  bin: 2.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 989
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 18791
  bin: 1.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 2629
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5670
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18858
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 663
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5195
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6992
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4417
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 290
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1263
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 354
  bin: 9.75e1
  variant carriers: 30
genotype quality: GenotypeQuality
  all individuals: 12856
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1235
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 256
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 1
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: African
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum

8-21562674-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21562674
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 21562674
    reference: chr 8
allele count: 1
allele frequency: 1.098345891088021e-5
allele num: 91046
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428518
  ensembl transcript: ENST00000524240
  gene symbol: GFRA2
  hgvsc: ENST00000524240.1:c.905-37T>C
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429979
  ensembl transcript: ENST00000517892
  gene symbol: GFRA2
  hgvsc: ENST00000517892.1:c.590-37T>C
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000383592
  ensembl transcript: ENST00000400782
  gene symbol: GFRA2
  hgvsc: ENST00000400782.4:c.590-37T>C
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429445
  ensembl transcript: ENST00000517328
  gene symbol: GFRA2
  hgvsc: ENST00000517328.1:c.905-37T>C
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000306654
  ensembl transcript: ENST00000306793
  gene symbol: GFRA2
  hgvsc: ENST00000306793.4:c.*959-37T>C
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429206
  ensembl transcript: ENST00000518077
  gene symbol: GFRA2
  hgvsc: ENST00000518077.1:c.506-37T>C
  variant of: http://identifiers.org/hgnc/4244
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8782
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2822
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18289
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12743
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11604
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 857
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4677
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10764
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1075
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 604
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5285
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3401
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 268
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7525
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1556
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5220
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1569
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18223
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: QD

8-21562675-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21562675
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 21562675
    reference: chr 8
allele count: 6
allele frequency: 6.652917304237908e-5
allele num: 90186
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428518
  ensembl transcript: ENST00000524240
  gene symbol: GFRA2
  hgvsc: ENST00000524240.1:c.905-38G>A
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000306654
  ensembl transcript: ENST00000306793
  gene symbol: GFRA2
  hgvsc: ENST00000306793.4:c.*959-38G>A
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429445
  ensembl transcript: ENST00000517328
  gene symbol: GFRA2
  hgvsc: ENST00000517328.1:c.905-38G>A
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000383592
  ensembl transcript: ENST00000400782
  gene symbol: GFRA2
  hgvsc: ENST00000400782.4:c.590-38G>A
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429206
  ensembl transcript: ENST00000518077
  gene symbol: GFRA2
  hgvsc: ENST00000518077.1:c.506-38G>A
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429979
  ensembl transcript: ENST00000517892
  gene symbol: GFRA2
  hgvsc: ENST00000517892.1:c.590-38G>A
  variant of: http://identifiers.org/hgnc/4244
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18149
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 849
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8589
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11748
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13119
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2832
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4479
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 372
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5316
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10129
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1758
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 520
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 620
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 266
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1668
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7564
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1692
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3493
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum

8-21562676-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21562676
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 21562676
    reference: chr 8
allele count: 4
allele frequency: 4.453251987263699e-5
allele num: 89822
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428518
  ensembl transcript: ENST00000524240
  gene symbol: GFRA2
  hgvsc: ENST00000524240.1:c.905-39C>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000306654
  ensembl transcript: ENST00000306793
  gene symbol: GFRA2
  hgvsc: ENST00000306793.4:c.*959-39C>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429445
  ensembl transcript: ENST00000517328
  gene symbol: GFRA2
  hgvsc: ENST00000517328.1:c.905-39C>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429979
  ensembl transcript: ENST00000517892
  gene symbol: GFRA2
  hgvsc: ENST00000517892.1:c.590-39C>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000383592
  ensembl transcript: ENST00000400782
  gene symbol: GFRA2
  hgvsc: ENST00000400782.4:c.590-39C>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429206
  ensembl transcript: ENST00000518077
  gene symbol: GFRA2
  hgvsc: ENST00000518077.1:c.506-39C>T
  variant of: http://identifiers.org/hgnc/4244
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 818
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18037
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2867
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4268
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11934
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8475
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13362
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5296
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 642
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 326
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1811
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 349
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5465
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 307
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3571
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9587
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum

8-21562679-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21562679
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 21562679
    reference: chr 8
allele count: 13
allele frequency: 1.46119953241615e-4
allele num: 88968
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000306654
  ensembl transcript: ENST00000306793
  gene symbol: GFRA2
  hgvsc: ENST00000306793.4:c.*959-42C>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429979
  ensembl transcript: ENST00000517892
  gene symbol: GFRA2
  hgvsc: ENST00000517892.1:c.590-42C>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429445
  ensembl transcript: ENST00000517328
  gene symbol: GFRA2
  hgvsc: ENST00000517328.1:c.905-42C>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000383592
  ensembl transcript: ENST00000400782
  gene symbol: GFRA2
  hgvsc: ENST00000400782.4:c.590-42C>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429206
  ensembl transcript: ENST00000518077
  gene symbol: GFRA2
  hgvsc: ENST00000518077.1:c.506-42C>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428518
  ensembl transcript: ENST00000524240
  gene symbol: GFRA2
  hgvsc: ENST00000524240.1:c.905-42C>T
  variant of: http://identifiers.org/hgnc/4244
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17698
  bin: 1.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13535
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 8787
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12433
  bin: 7.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 768
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2892
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3648
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 257
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5891
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 473
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 983
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 331
  bin: 9.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 302
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 271
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2075
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2156
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 697
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 17121
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2086
  bin: 1.75e1
  variant carriers: 1
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: East Asian
reference allele: G
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: MQRankSum

8-21562681-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21562681
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 21562681
    reference: chr 8
allele count: 1011
allele frequency: 1.146414478160294e-2
allele num: 88188
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429979
  ensembl transcript: ENST00000517892
  gene symbol: GFRA2
  hgvsc: ENST00000517892.1:c.590-44C>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000383592
  ensembl transcript: ENST00000400782
  gene symbol: GFRA2
  hgvsc: ENST00000400782.4:c.590-44C>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428518
  ensembl transcript: ENST00000524240
  gene symbol: GFRA2
  hgvsc: ENST00000524240.1:c.905-44C>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000306654
  ensembl transcript: ENST00000306793
  gene symbol: GFRA2
  hgvsc: ENST00000306793.4:c.*959-44C>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429445
  ensembl transcript: ENST00000517328
  gene symbol: GFRA2
  hgvsc: ENST00000517328.1:c.905-44C>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429206
  ensembl transcript: ENST00000518077
  gene symbol: GFRA2
  hgvsc: ENST00000518077.1:c.506-44C>T
  variant of: http://identifiers.org/hgnc/4244
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 4.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 3.25e1
  variant carriers: 46
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12717
  bin: 7.5e0
  variant carriers: 103
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9079
  bin: 2.25e1
  variant carriers: 216
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 4.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 2895
  bin: 2.5e0
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 17536
  bin: 1.25e1
  variant carriers: 289
genotype depth: GenotypeDepth
  all individuals: 13461
  bin: 1.75e1
  variant carriers: 297
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3283
  bin: 2.75e1
  variant carriers: 101
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 3.75e1
  variant carriers: 18
genotype quality: GenotypeQuality
  all individuals: 581
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 8.75e1
  variant carriers: 24
genotype quality: GenotypeQuality
  all individuals: 268
  bin: 7.75e1
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 304
  bin: 7.25e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 2470
  bin: 1.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 5.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 3738
  bin: 7.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 9.25e1
  variant carriers: 22
genotype quality: GenotypeQuality
  all individuals: 793
  bin: 5.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 5264
  bin: 2.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 16405
  bin: 2.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 7733
  bin: 3.25e1
  variant carriers: 5
num of homozygotes: 11
population: African
population: Other
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: QD

http://identifiers.org/exac.variant/8-21562683-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21562683
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 21562683
    reference: chr 8
allele count: 16
allele frequency: 1.844720640118062e-4
allele num: 86734
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000306654
  ensembl transcript: ENST00000306793
  gene symbol: GFRA2
  hgvsc: ENST00000306793.4:c.*959-46G>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428518
  ensembl transcript: ENST00000524240
  gene symbol: GFRA2
  hgvsc: ENST00000524240.1:c.905-46G>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429206
  ensembl transcript: ENST00000518077
  gene symbol: GFRA2
  hgvsc: ENST00000518077.1:c.506-46G>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429445
  ensembl transcript: ENST00000517328
  gene symbol: GFRA2
  hgvsc: ENST00000517328.1:c.905-46G>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000383592
  ensembl transcript: ENST00000400782
  gene symbol: GFRA2
  hgvsc: ENST00000400782.4:c.590-46G>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429979
  ensembl transcript: ENST00000517892
  gene symbol: GFRA2
  hgvsc: ENST00000517892.1:c.590-46G>T
  variant of: http://identifiers.org/hgnc/4244
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2959
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 17327
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13128
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9298
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2916
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13388
  bin: 1.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 698
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 922
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 291
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2481
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15445
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5336
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2509
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7911
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3302
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 349
  bin: 9.75e1
  variant carriers: 16
genotype quality: GenotypeQuality
  all individuals: 3377
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: Other
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: QD

8-21563396-TG-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21563396
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 21563395
    reference: chr 8
allele count: 1
allele frequency: 5.199126546740148e-5
allele num: 19234
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000383592
  ensembl transcript: ENST00000400782
  gene symbol: GFRA2
  hgvsc: ENST00000400782.4:c.589+47delC
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429979
  ensembl transcript: ENST00000517892
  gene symbol: GFRA2
  hgvsc: ENST00000517892.1:c.589+47delC
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429445
  ensembl transcript: ENST00000517328
  gene symbol: GFRA2
  hgvsc: ENST00000517328.1:c.904+47delC
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000306654
  ensembl transcript: ENST00000306793
  gene symbol: GFRA2
  hgvsc: ENST00000306793.4:c.*958+47delC
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428518
  ensembl transcript: ENST00000524240
  gene symbol: GFRA2
  hgvsc: ENST00000524240.1:c.904+47delC
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429206
  ensembl transcript: ENST00000518077
  gene symbol: GFRA2
  hgvsc: ENST00000518077.1:c.505+47delC
  variant of: http://identifiers.org/hgnc/4244
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 5513
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1787
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1519
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2314
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36625
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1458
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 948
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 931
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3731
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 424
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 278
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 414
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2400
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 623
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2255
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 720
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2327
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: TG
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum

8-21563401-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21563401
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 21563401
    reference: chr 8
allele count: 0
allele frequency: 0.0e0
allele num: 19264
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429445
  ensembl transcript: ENST00000517328
  gene symbol: GFRA2
  hgvsc: ENST00000517328.1:c.904+43C>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000383592
  ensembl transcript: ENST00000400782
  gene symbol: GFRA2
  hgvsc: ENST00000400782.4:c.589+43C>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428518
  ensembl transcript: ENST00000524240
  gene symbol: GFRA2
  hgvsc: ENST00000524240.1:c.904+43C>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429979
  ensembl transcript: ENST00000517892
  gene symbol: GFRA2
  hgvsc: ENST00000517892.1:c.589+43C>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429206
  ensembl transcript: ENST00000518077
  gene symbol: GFRA2
  hgvsc: ENST00000518077.1:c.505+43C>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000306654
  ensembl transcript: ENST00000306793
  gene symbol: GFRA2
  hgvsc: ENST00000306793.4:c.*958+43C>T
  variant of: http://identifiers.org/hgnc/4244
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 1662
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5511
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36644
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2268
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1601
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1546
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 291
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 632
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 403
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3714
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26443
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 709
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2485
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7826
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 907
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2580
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 539
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2154
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQ

8-21563423-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21563423
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 21563423
    reference: chr 8
allele count: 2
allele frequency: 9.982032341784787e-5
allele num: 20036
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000306654
  ensembl transcript: ENST00000306793
  gene symbol: GFRA2
  hgvsc: ENST00000306793.4:c.*958+21T>A
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000383592
  ensembl transcript: ENST00000400782
  gene symbol: GFRA2
  hgvsc: ENST00000400782.4:c.589+21T>A
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429206
  ensembl transcript: ENST00000518077
  gene symbol: GFRA2
  hgvsc: ENST00000518077.1:c.505+21T>A
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429979
  ensembl transcript: ENST00000517892
  gene symbol: GFRA2
  hgvsc: ENST00000517892.1:c.589+21T>A
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429445
  ensembl transcript: ENST00000517328
  gene symbol: GFRA2
  hgvsc: ENST00000517328.1:c.904+21T>A
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428518
  ensembl transcript: ENST00000524240
  gene symbol: GFRA2
  hgvsc: ENST00000524240.1:c.904+21T>A
  variant of: http://identifiers.org/hgnc/4244
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3520
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1314
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1002
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9204
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2070
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35981
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7068
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 508
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 377
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 288
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2353
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 312
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2457
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 458
  bin: 2.75e1
  variant carriers: 1
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: QD

8-21563427-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21563427
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 21563427
    reference: chr 8
allele count: 1
allele frequency: 4.936808846761453e-5
allele num: 20256
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000306654
  ensembl transcript: ENST00000306793
  gene symbol: GFRA2
  hgvsc: ENST00000306793.4:c.*958+17C>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429206
  ensembl transcript: ENST00000518077
  gene symbol: GFRA2
  hgvsc: ENST00000518077.1:c.505+17C>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000383592
  ensembl transcript: ENST00000400782
  gene symbol: GFRA2
  hgvsc: ENST00000400782.4:c.589+17C>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429979
  ensembl transcript: ENST00000517892
  gene symbol: GFRA2
  hgvsc: ENST00000517892.1:c.589+17C>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429445
  ensembl transcript: ENST00000517328
  gene symbol: GFRA2
  hgvsc: ENST00000517328.1:c.904+17C>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428518
  ensembl transcript: ENST00000524240
  gene symbol: GFRA2
  hgvsc: ENST00000524240.1:c.904+17C>T
  variant of: http://identifiers.org/hgnc/4244
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1012
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35101
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2143
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1207
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10504
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3757
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 342
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31581
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 298
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2224
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 422
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2476
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7765
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 450
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1088
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 259
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum

8-21563432-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21563432
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 21563432
    reference: chr 8
allele count: 3
allele frequency: 1.453206742879287e-4
allele num: 20644
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429206
  ensembl transcript: ENST00000518077
  gene symbol: GFRA2
  hgvsc: ENST00000518077.1:c.505+12C>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428518
  ensembl transcript: ENST00000524240
  gene symbol: GFRA2
  hgvsc: ENST00000524240.1:c.904+12C>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000383592
  ensembl transcript: ENST00000400782
  gene symbol: GFRA2
  hgvsc: ENST00000400782.4:c.589+12C>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429979
  ensembl transcript: ENST00000517892
  gene symbol: GFRA2
  hgvsc: ENST00000517892.1:c.589+12C>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429445
  ensembl transcript: ENST00000517328
  gene symbol: GFRA2
  hgvsc: ENST00000517328.1:c.904+12C>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000306654
  ensembl transcript: ENST00000306793
  gene symbol: GFRA2
  hgvsc: ENST00000306793.4:c.*958+12C>T
  variant of: http://identifiers.org/hgnc/4244
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1010
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2317
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4070
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33656
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1038
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12663
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 341
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10341
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 360
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31211
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1924
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 301
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1090
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 380
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum

8-21563433-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21563433
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 21563433
    reference: chr 8
allele count: 1
allele frequency: 4.828585224529213e-5
allele num: 20710
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000383592
  ensembl transcript: ENST00000400782
  gene symbol: GFRA2
  hgvsc: ENST00000400782.4:c.589+11C>G
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429206
  ensembl transcript: ENST00000518077
  gene symbol: GFRA2
  hgvsc: ENST00000518077.1:c.505+11C>G
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000306654
  ensembl transcript: ENST00000306793
  gene symbol: GFRA2
  hgvsc: ENST00000306793.4:c.*958+11C>G
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429445
  ensembl transcript: ENST00000517328
  gene symbol: GFRA2
  hgvsc: ENST00000517328.1:c.904+11C>G
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429979
  ensembl transcript: ENST00000517892
  gene symbol: GFRA2
  hgvsc: ENST00000517892.1:c.589+11C>G
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428518
  ensembl transcript: ENST00000524240
  gene symbol: GFRA2
  hgvsc: ENST00000524240.1:c.904+11C>G
  variant of: http://identifiers.org/hgnc/4244
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 33389
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2339
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13022
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4112
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 980
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 600
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1041
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 358
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1506
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 380
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 298
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 330
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1890
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10679
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31043
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
reference allele: G
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: DP

8-21563436-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21563436
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 21563436
    reference: chr 8
allele count: 0
allele frequency: 0.0e0
allele num: 20946
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429445
  ensembl transcript: ENST00000517328
  gene symbol: GFRA2
  hgvsc: ENST00000517328.1:c.904+8C>A
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428518
  ensembl transcript: ENST00000524240
  gene symbol: GFRA2
  hgvsc: ENST00000524240.1:c.904+8C>A
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000383592
  ensembl transcript: ENST00000400782
  gene symbol: GFRA2
  hgvsc: ENST00000400782.4:c.589+8C>A
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000306654
  ensembl transcript: ENST00000306793
  gene symbol: GFRA2
  hgvsc: ENST00000306793.4:c.*958+8C>A
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429206
  ensembl transcript: ENST00000518077
  gene symbol: GFRA2
  hgvsc: ENST00000518077.1:c.505+8C>A
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429979
  ensembl transcript: ENST00000517892
  gene symbol: GFRA2
  hgvsc: ENST00000517892.1:c.589+8C>A
  variant of: http://identifiers.org/hgnc/4244
canonical: true
consequence: splice region
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32361
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4300
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2389
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 915
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14324
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1044
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1087
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 301
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 343
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 379
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1569
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 900
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30264
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 9.25e1
  variant carriers: 0
hgvs: c.904+8C>A
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: Latino
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: ClippingRankSum

8-21563440-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21563440
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 21563440
    reference: chr 8
allele count: 0
allele frequency: 0.0e0
allele num: 21252
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429445
  ensembl transcript: ENST00000517328
  gene symbol: GFRA2
  hgvsc: ENST00000517328.1:c.904+4A>G
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000306654
  ensembl transcript: ENST00000306793
  gene symbol: GFRA2
  hgvsc: ENST00000306793.4:c.*958+4A>G
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429979
  ensembl transcript: ENST00000517892
  gene symbol: GFRA2
  hgvsc: ENST00000517892.1:c.589+4A>G
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428518
  ensembl transcript: ENST00000524240
  gene symbol: GFRA2
  hgvsc: ENST00000524240.1:c.904+4A>G
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000383592
  ensembl transcript: ENST00000400782
  gene symbol: GFRA2
  hgvsc: ENST00000400782.4:c.589+4A>G
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429206
  ensembl transcript: ENST00000518077
  gene symbol: GFRA2
  hgvsc: ENST00000518077.1:c.505+4A>G
  variant of: http://identifiers.org/hgnc/4244
canonical: true
consequence: splice region
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 16355
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30647
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4423
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2511
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 600
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 832
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1063
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 329
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6248
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1089
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28881
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 299
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1748
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 302
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 379
  bin: 7.75e1
  variant carriers: 0
hgvs: c.904+4A>G
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
reference allele: T
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: QD

8-21563463-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21563463
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 21563463
    reference: chr 8
allele count: 1
allele frequency: 4.246284501061571e-5
allele num: 23550
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429206
  ensembl transcript: ENST00000518077
  gene symbol: GFRA2
  hgvsc: ENST00000518077.1:c.486C>T
  hgvsp: ENST00000518077.1:c.486C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429445
  ensembl transcript: ENST00000517328
  gene symbol: GFRA2
  hgvsc: ENST00000517328.1:c.885C>T
  hgvsp: ENST00000517328.1:c.885C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000306654
  ensembl transcript: ENST00000306793
  gene symbol: GFRA2
  hgvsc: ENST00000306793.4:c.*939C>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428518
  ensembl transcript: ENST00000524240
  gene symbol: GFRA2
  hgvsc: ENST00000524240.1:c.885C>T
  hgvsp: ENST00000524240.1:c.885C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000383592
  ensembl transcript: ENST00000400782
  gene symbol: GFRA2
  hgvsc: ENST00000400782.4:c.570C>T
  hgvsp: ENST00000400782.4:c.570C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429979
  ensembl transcript: ENST00000517892
  gene symbol: GFRA2
  hgvsc: ENST00000517892.1:c.570C>T
  hgvsp: ENST00000517892.1:c.570C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4244
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20422
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26842
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1225
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2859
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1112
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4848
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 372
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 844
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23411
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 388
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 289
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Gly295Gly
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ

8-21563463-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21563463
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 21563463
    reference: chr 8
allele count: 1
allele frequency: 4.246284501061571e-5
allele num: 23550
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000306654
  ensembl transcript: ENST00000306793
  gene symbol: GFRA2
  hgvsc: ENST00000306793.4:c.*939C>A
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429206
  ensembl transcript: ENST00000518077
  gene symbol: GFRA2
  hgvsc: ENST00000518077.1:c.486C>A
  hgvsp: ENST00000518077.1:c.486C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428518
  ensembl transcript: ENST00000524240
  gene symbol: GFRA2
  hgvsc: ENST00000524240.1:c.885C>A
  hgvsp: ENST00000524240.1:c.885C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429979
  ensembl transcript: ENST00000517892
  gene symbol: GFRA2
  hgvsc: ENST00000517892.1:c.570C>A
  hgvsp: ENST00000517892.1:c.570C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000383592
  ensembl transcript: ENST00000400782
  gene symbol: GFRA2
  hgvsc: ENST00000400782.4:c.570C>A
  hgvsp: ENST00000400782.4:c.570C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429445
  ensembl transcript: ENST00000517328
  gene symbol: GFRA2
  hgvsc: ENST00000517328.1:c.885C>A
  hgvsp: ENST00000517328.1:c.885C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4244
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4848
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26842
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20422
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1112
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1225
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2859
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1249
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1090
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23411
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2785
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 844
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 388
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 277
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Gly295Gly
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP

8-21563466-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21563466
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 21563466
    reference: chr 8
allele count: 0
allele frequency: 0.0e0
allele num: 24118
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429979
  ensembl transcript: ENST00000517892
  gene symbol: GFRA2
  hgvsc: ENST00000517892.1:c.567G>A
  hgvsp: ENST00000517892.1:c.567G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428518
  ensembl transcript: ENST00000524240
  gene symbol: GFRA2
  hgvsc: ENST00000524240.1:c.882G>A
  hgvsp: ENST00000524240.1:c.882G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429445
  ensembl transcript: ENST00000517328
  gene symbol: GFRA2
  hgvsc: ENST00000517328.1:c.882G>A
  hgvsp: ENST00000517328.1:c.882G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000383592
  ensembl transcript: ENST00000400782
  gene symbol: GFRA2
  hgvsc: ENST00000400782.4:c.567G>A
  hgvsp: ENST00000400782.4:c.567G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000306654
  ensembl transcript: ENST00000306793
  gene symbol: GFRA2
  hgvsc: ENST00000306793.4:c.*936G>A
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429206
  ensembl transcript: ENST00000518077
  gene symbol: GFRA2
  hgvsc: ENST00000518077.1:c.483G>A
  hgvsp: ENST00000518077.1:c.483G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4244
canonical: true
consequence: synonymous
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1115
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2892
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28542
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 18592
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4985
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1352
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 315
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1089
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 981
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7247
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1046
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 380
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17985
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1573
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 651
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Leu294Leu
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: East Asian
reference allele: C
site quality: FS
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP

8-21563472-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21563472
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 21563472
    reference: chr 8
allele count: 3
allele frequency: 1.201634222542658e-4
allele num: 24966
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000306654
  ensembl transcript: ENST00000306793
  gene symbol: GFRA2
  hgvsc: ENST00000306793.4:c.*930G>A
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428518
  ensembl transcript: ENST00000524240
  gene symbol: GFRA2
  hgvsc: ENST00000524240.1:c.876G>A
  hgvsp: ENST00000524240.1:c.876G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429206
  ensembl transcript: ENST00000518077
  gene symbol: GFRA2
  hgvsc: ENST00000518077.1:c.477G>A
  hgvsp: ENST00000518077.1:c.477G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429445
  ensembl transcript: ENST00000517328
  gene symbol: GFRA2
  hgvsc: ENST00000517328.1:c.876G>A
  hgvsp: ENST00000517328.1:c.876G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429979
  ensembl transcript: ENST00000517892
  gene symbol: GFRA2
  hgvsc: ENST00000517892.1:c.561G>A
  hgvsp: ENST00000517892.1:c.561G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000383592
  ensembl transcript: ENST00000400782
  gene symbol: GFRA2
  hgvsc: ENST00000400782.4:c.561G>A
  hgvsp: ENST00000400782.4:c.561G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4244
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1548
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 30124
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16738
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2917
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5189
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1120
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7424
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16164
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 314
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 997
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27660
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2187
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 286
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 292
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 417
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ala292Ala
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum

8-21563482-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21563482
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 21563482
    reference: chr 8
allele count: 0
allele frequency: 0.0e0
allele num: 26586
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429979
  ensembl transcript: ENST00000517892
  gene symbol: GFRA2
  hgvsc: ENST00000517892.1:c.551A>G
  hgvsp: ENSP00000429979.1:p.Asn184Ser
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000383592
  ensembl transcript: ENST00000400782
  gene symbol: GFRA2
  hgvsc: ENST00000400782.4:c.551A>G
  hgvsp: ENSP00000383592.4:p.Asn184Ser
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000306654
  ensembl transcript: ENST00000306793
  gene symbol: GFRA2
  hgvsc: ENST00000306793.4:c.*920A>G
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429445
  ensembl transcript: ENST00000517328
  gene symbol: GFRA2
  hgvsc: ENST00000517328.1:c.866A>G
  hgvsp: ENSP00000429445.1:p.Asn289Ser
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428518
  ensembl transcript: ENST00000524240
  gene symbol: GFRA2
  hgvsc: ENST00000524240.1:c.866A>G
  hgvsp: ENSP00000428518.1:p.Asn289Ser
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429206
  ensembl transcript: ENST00000518077
  gene symbol: GFRA2
  hgvsc: ENST00000518077.1:c.467A>G
  hgvsp: ENSP00000429206.1:p.Asn156Ser
  variant of: http://identifiers.org/hgnc/4244
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14240
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5605
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32052
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1812
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2939
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 449
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 293
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 329
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 394
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 858
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1089
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29978
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 436
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Asn289Ser
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: Other
reference allele: T
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum

8-21563484-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21563484
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 21563484
    reference: chr 8
allele count: 3
allele frequency: 1.120657452372058e-4
allele num: 26770
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000306654
  ensembl transcript: ENST00000306793
  gene symbol: GFRA2
  hgvsc: ENST00000306793.4:c.*918C>G
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429206
  ensembl transcript: ENST00000518077
  gene symbol: GFRA2
  hgvsc: ENST00000518077.1:c.465C>G
  hgvsp: ENSP00000429206.1:p.Asp155Glu
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429979
  ensembl transcript: ENST00000517892
  gene symbol: GFRA2
  hgvsc: ENST00000517892.1:c.549C>G
  hgvsp: ENSP00000429979.1:p.Asp183Glu
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429445
  ensembl transcript: ENST00000517328
  gene symbol: GFRA2
  hgvsc: ENST00000517328.1:c.864C>G
  hgvsp: ENSP00000429445.1:p.Asp288Glu
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000383592
  ensembl transcript: ENST00000400782
  gene symbol: GFRA2
  hgvsc: ENST00000400782.4:c.549C>G
  hgvsp: ENSP00000383592.4:p.Asp183Glu
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428518
  ensembl transcript: ENST00000524240
  gene symbol: GFRA2
  hgvsc: ENST00000524240.1:c.864C>G
  hgvsp: ENSP00000428518.1:p.Asp288Glu
  variant of: http://identifiers.org/hgnc/4244
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5644
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13930
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32241
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2946
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1885
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1126
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 446
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 322
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 865
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2084
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 486
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13574
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 988
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Asp288Glu
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum

8-21563485-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21563485
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 21563485
    reference: chr 8
allele count: 1
allele frequency: 3.720514919264826e-5
allele num: 26878
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000383592
  ensembl transcript: ENST00000400782
  gene symbol: GFRA2
  hgvsc: ENST00000400782.4:c.548A>G
  hgvsp: ENSP00000383592.4:p.Asp183Gly
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429206
  ensembl transcript: ENST00000518077
  gene symbol: GFRA2
  hgvsc: ENST00000518077.1:c.464A>G
  hgvsp: ENSP00000429206.1:p.Asp155Gly
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000306654
  ensembl transcript: ENST00000306793
  gene symbol: GFRA2
  hgvsc: ENST00000306793.4:c.*917A>G
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429979
  ensembl transcript: ENST00000517892
  gene symbol: GFRA2
  hgvsc: ENST00000517892.1:c.548A>G
  hgvsp: ENSP00000429979.1:p.Asp183Gly
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429445
  ensembl transcript: ENST00000517328
  gene symbol: GFRA2
  hgvsc: ENST00000517328.1:c.863A>G
  hgvsp: ENSP00000429445.1:p.Asp288Gly
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428518
  ensembl transcript: ENST00000524240
  gene symbol: GFRA2
  hgvsc: ENST00000524240.1:c.863A>G
  hgvsp: ENSP00000428518.1:p.Asp288Gly
  variant of: http://identifiers.org/hgnc/4244
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2946
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13820
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1914
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32326
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5653
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30284
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 476
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13478
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 455
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 397
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 881
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 330
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 293
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Asp288Gly
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
population: Latino
population: African
population: European (Finnish)
reference allele: T
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD

8-21563488-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21563488
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 21563488
    reference: chr 8
allele count: 1
allele frequency: 3.670802437412819e-5
allele num: 27242
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428518
  ensembl transcript: ENST00000524240
  gene symbol: GFRA2
  hgvsc: ENST00000524240.1:c.860C>A
  hgvsp: ENSP00000428518.1:p.Ala287Glu
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429979
  ensembl transcript: ENST00000517892
  gene symbol: GFRA2
  hgvsc: ENST00000517892.1:c.545C>A
  hgvsp: ENSP00000429979.1:p.Ala182Glu
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000383592
  ensembl transcript: ENST00000400782
  gene symbol: GFRA2
  hgvsc: ENST00000400782.4:c.545C>A
  hgvsp: ENSP00000383592.4:p.Ala182Glu
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429445
  ensembl transcript: ENST00000517328
  gene symbol: GFRA2
  hgvsc: ENST00000517328.1:c.860C>A
  hgvsp: ENSP00000429445.1:p.Ala287Glu
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429206
  ensembl transcript: ENST00000518077
  gene symbol: GFRA2
  hgvsc: ENST00000518077.1:c.461C>A
  hgvsp: ENSP00000429206.1:p.Ala154Glu
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000306654
  ensembl transcript: ENST00000306793
  gene symbol: GFRA2
  hgvsc: ENST00000306793.4:c.*914C>A
  variant of: http://identifiers.org/hgnc/4244
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5712
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2119
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1138
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2967
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32429
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13375
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13062
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30368
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 395
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7927
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 709
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 876
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 992
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 452
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 316
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ala287Glu
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
population: African
population: East Asian
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: QD

8-21563497-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21563497
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 21563497
    reference: chr 8
allele count: 1
allele frequency: 3.531073446327684e-5
allele num: 28320
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429445
  ensembl transcript: ENST00000517328
  gene symbol: GFRA2
  hgvsc: ENST00000517328.1:c.851G>C
  hgvsp: ENSP00000429445.1:p.Ser284Thr
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428518
  ensembl transcript: ENST00000524240
  gene symbol: GFRA2
  hgvsc: ENST00000524240.1:c.851G>C
  hgvsp: ENSP00000428518.1:p.Ser284Thr
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000306654
  ensembl transcript: ENST00000306793
  gene symbol: GFRA2
  hgvsc: ENST00000306793.4:c.*905G>C
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000383592
  ensembl transcript: ENST00000400782
  gene symbol: GFRA2
  hgvsc: ENST00000400782.4:c.536G>C
  hgvsp: ENSP00000383592.4:p.Ser179Thr
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429206
  ensembl transcript: ENST00000518077
  gene symbol: GFRA2
  hgvsc: ENST00000518077.1:c.452G>C
  hgvsp: ENSP00000429206.1:p.Ser151Thr
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429979
  ensembl transcript: ENST00000517892
  gene symbol: GFRA2
  hgvsc: ENST00000517892.1:c.536G>C
  hgvsp: ENSP00000429979.1:p.Ser179Thr
  variant of: http://identifiers.org/hgnc/4244
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1134
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2368
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2993
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5826
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32606
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12846
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 461
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8083
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 452
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12620
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31082
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2035
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ser284Thr
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum

8-21563498-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21563498
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 21563498
    reference: chr 8
allele count: 1
allele frequency: 3.518648838845883e-5
allele num: 28420
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000306654
  ensembl transcript: ENST00000306793
  gene symbol: GFRA2
  hgvsc: ENST00000306793.4:c.*904A>G
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429206
  ensembl transcript: ENST00000518077
  gene symbol: GFRA2
  hgvsc: ENST00000518077.1:c.451A>G
  hgvsp: ENSP00000429206.1:p.Ser151Gly
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428518
  ensembl transcript: ENST00000524240
  gene symbol: GFRA2
  hgvsc: ENST00000524240.1:c.850A>G
  hgvsp: ENSP00000428518.1:p.Ser284Gly
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000383592
  ensembl transcript: ENST00000400782
  gene symbol: GFRA2
  hgvsc: ENST00000400782.4:c.535A>G
  hgvsp: ENSP00000383592.4:p.Ser179Gly
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429445
  ensembl transcript: ENST00000517328
  gene symbol: GFRA2
  hgvsc: ENST00000517328.1:c.850A>G
  hgvsp: ENSP00000429445.1:p.Ser284Gly
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429979
  ensembl transcript: ENST00000517892
  gene symbol: GFRA2
  hgvsc: ENST00000517892.1:c.535A>G
  hgvsp: ENSP00000429979.1:p.Ser179Gly
  variant of: http://identifiers.org/hgnc/4244
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1132
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32644
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5826
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2380
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12811
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2993
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12597
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 846
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1947
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 997
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 315
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 478
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31249
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1089
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Ser284Gly
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
reference allele: T
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum

8-21563499-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21563499
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 21563499
    reference: chr 8
allele count: 2
allele frequency: 7.02543206407194e-5
allele num: 28468
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000306654
  ensembl transcript: ENST00000306793
  gene symbol: GFRA2
  hgvsc: ENST00000306793.4:c.*903C>G
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429206
  ensembl transcript: ENST00000518077
  gene symbol: GFRA2
  hgvsc: ENST00000518077.1:c.450C>G
  hgvsp: ENST00000518077.1:c.450C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000383592
  ensembl transcript: ENST00000400782
  gene symbol: GFRA2
  hgvsc: ENST00000400782.4:c.534C>G
  hgvsp: ENST00000400782.4:c.534C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429979
  ensembl transcript: ENST00000517892
  gene symbol: GFRA2
  hgvsc: ENST00000517892.1:c.534C>G
  hgvsp: ENST00000517892.1:c.534C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428518
  ensembl transcript: ENST00000524240
  gene symbol: GFRA2
  hgvsc: ENST00000524240.1:c.849C>G
  hgvsp: ENST00000524240.1:c.849C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429445
  ensembl transcript: ENST00000517328
  gene symbol: GFRA2
  hgvsc: ENST00000517328.1:c.849C>G
  hgvsp: ENST00000517328.1:c.849C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4244
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2998
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2422
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12809
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32596
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5816
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1134
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 315
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 348
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 396
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 424
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8085
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1913
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Thr283Thr
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/8-21563505-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21563505
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 21563505
    reference: chr 8
allele count: 8
allele frequency: 2.791736460078169e-4
allele num: 28656
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429979
  ensembl transcript: ENST00000517892
  gene symbol: GFRA2
  hgvsc: ENST00000517892.1:c.528G>T
  hgvsp: ENST00000517892.1:c.528G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000306654
  ensembl transcript: ENST00000306793
  gene symbol: GFRA2
  hgvsc: ENST00000306793.4:c.*897G>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000383592
  ensembl transcript: ENST00000400782
  gene symbol: GFRA2
  hgvsc: ENST00000400782.4:c.528G>T
  hgvsp: ENST00000400782.4:c.528G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429445
  ensembl transcript: ENST00000517328
  gene symbol: GFRA2
  hgvsc: ENST00000517328.1:c.843G>T
  hgvsp: ENST00000517328.1:c.843G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428518
  ensembl transcript: ENST00000524240
  gene symbol: GFRA2
  hgvsc: ENST00000524240.1:c.843G>T
  hgvsp: ENST00000524240.1:c.843G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429206
  ensembl transcript: ENST00000518077
  gene symbol: GFRA2
  hgvsc: ENST00000518077.1:c.444G>T
  hgvsp: ENST00000518077.1:c.444G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4244
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32141
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 5717
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2699
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 3000
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13052
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1132
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 992
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 482
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 882
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 563
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2060
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1094
  bin: 9.75e1
  variant carriers: 7
hgvs: p.Thr281Thr
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP

8-21563505-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21563505
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 21563505
    reference: chr 8
allele count: 1
allele frequency: 3.489670575097711e-5
allele num: 28656
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429979
  ensembl transcript: ENST00000517892
  gene symbol: GFRA2
  hgvsc: ENST00000517892.1:c.528G>A
  hgvsp: ENST00000517892.1:c.528G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000383592
  ensembl transcript: ENST00000400782
  gene symbol: GFRA2
  hgvsc: ENST00000400782.4:c.528G>A
  hgvsp: ENST00000400782.4:c.528G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429445
  ensembl transcript: ENST00000517328
  gene symbol: GFRA2
  hgvsc: ENST00000517328.1:c.843G>A
  hgvsp: ENST00000517328.1:c.843G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000306654
  ensembl transcript: ENST00000306793
  gene symbol: GFRA2
  hgvsc: ENST00000306793.4:c.*897G>A
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428518
  ensembl transcript: ENST00000524240
  gene symbol: GFRA2
  hgvsc: ENST00000524240.1:c.843G>A
  hgvsp: ENST00000524240.1:c.843G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429206
  ensembl transcript: ENST00000518077
  gene symbol: GFRA2
  hgvsc: ENST00000518077.1:c.444G>A
  hgvsp: ENST00000518077.1:c.444G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4244
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1132
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3000
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2699
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5717
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13052
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32141
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 563
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 992
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 325
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 395
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 482
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Thr281Thr
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: European (Finnish)
population: African
population: South Asian
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP

8-21563506-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21563506
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 21563506
    reference: chr 8
allele count: 1
allele frequency: 3.479229002852968e-5
allele num: 28742
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429979
  ensembl transcript: ENST00000517892
  gene symbol: GFRA2
  hgvsc: ENST00000517892.1:c.527C>T
  hgvsp: ENSP00000429979.1:p.Thr176Met
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429206
  ensembl transcript: ENST00000518077
  gene symbol: GFRA2
  hgvsc: ENST00000518077.1:c.443C>T
  hgvsp: ENSP00000429206.1:p.Thr148Met
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429445
  ensembl transcript: ENST00000517328
  gene symbol: GFRA2
  hgvsc: ENST00000517328.1:c.842C>T
  hgvsp: ENSP00000429445.1:p.Thr281Met
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000383592
  ensembl transcript: ENST00000400782
  gene symbol: GFRA2
  hgvsc: ENST00000400782.4:c.527C>T
  hgvsp: ENSP00000383592.4:p.Thr176Met
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000306654
  ensembl transcript: ENST00000306793
  gene symbol: GFRA2
  hgvsc: ENST00000306793.4:c.*896C>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428518
  ensembl transcript: ENST00000524240
  gene symbol: GFRA2
  hgvsc: ENST00000524240.1:c.842C>T
  hgvsp: ENSP00000428518.1:p.Thr281Met
  variant of: http://identifiers.org/hgnc/4244
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1133
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31979
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5714
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2724
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3000
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13176
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 295
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 394
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 901
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 494
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30690
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2042
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 481
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Thr281Met
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff

8-21563512-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21563512
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 21563512
    reference: chr 8
allele count: 1
allele frequency: 3.482621717629031e-5
allele num: 28714
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429206
  ensembl transcript: ENST00000518077
  gene symbol: GFRA2
  hgvsc: ENST00000518077.1:c.437A>G
  hgvsp: ENSP00000429206.1:p.Tyr146Cys
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428518
  ensembl transcript: ENST00000524240
  gene symbol: GFRA2
  hgvsc: ENST00000524240.1:c.836A>G
  hgvsp: ENSP00000428518.1:p.Tyr279Cys
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429445
  ensembl transcript: ENST00000517328
  gene symbol: GFRA2
  hgvsc: ENST00000517328.1:c.836A>G
  hgvsp: ENSP00000429445.1:p.Tyr279Cys
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000383592
  ensembl transcript: ENST00000400782
  gene symbol: GFRA2
  hgvsc: ENST00000400782.4:c.521A>G
  hgvsp: ENSP00000383592.4:p.Tyr174Cys
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000306654
  ensembl transcript: ENST00000306793
  gene symbol: GFRA2
  hgvsc: ENST00000306793.4:c.*890A>G
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429979
  ensembl transcript: ENST00000517892
  gene symbol: GFRA2
  hgvsc: ENST00000517892.1:c.521A>G
  hgvsp: ENSP00000429979.1:p.Tyr174Cys
  variant of: http://identifiers.org/hgnc/4244
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5441
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3008
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31095
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3037
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13985
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 392
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29610
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 983
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 583
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7738
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 312
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 465
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Tyr279Cys
num of homozygotes: 0
population: Latino
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: T
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: QD

http://identifiers.org/exac.variant/8-21563516-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21563516
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 21563516
    reference: chr 8
allele count: 3
allele frequency: 1.04704732653916e-4
allele num: 28652
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000306654
  ensembl transcript: ENST00000306793
  gene symbol: GFRA2
  hgvsc: ENST00000306793.4:c.*886T>G
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000383592
  ensembl transcript: ENST00000400782
  gene symbol: GFRA2
  hgvsc: ENST00000400782.4:c.517T>G
  hgvsp: ENSP00000383592.4:p.Ser173Ala
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428518
  ensembl transcript: ENST00000524240
  gene symbol: GFRA2
  hgvsc: ENST00000524240.1:c.832T>G
  hgvsp: ENSP00000428518.1:p.Ser278Ala
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429445
  ensembl transcript: ENST00000517328
  gene symbol: GFRA2
  hgvsc: ENST00000517328.1:c.832T>G
  hgvsp: ENSP00000429445.1:p.Ser278Ala
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429979
  ensembl transcript: ENST00000517892
  gene symbol: GFRA2
  hgvsc: ENST00000517892.1:c.517T>G
  hgvsp: ENSP00000429979.1:p.Ser173Ala
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429206
  ensembl transcript: ENST00000518077
  gene symbol: GFRA2
  hgvsc: ENST00000518077.1:c.433T>G
  hgvsp: ENSP00000429206.1:p.Ser145Ala
  variant of: http://identifiers.org/hgnc/4244
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1124
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5315
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14721
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3098
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30373
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2993
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 513
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 475
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14619
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2468
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 956
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 977
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ser278Ala
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
reference allele: A
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: DP

8-21563522-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21563522
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 21563522
    reference: chr 8
allele count: 2
allele frequency: 7.020992768377449e-5
allele num: 28486
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429979
  ensembl transcript: ENST00000517892
  gene symbol: GFRA2
  hgvsc: ENST00000517892.1:c.511C>T
  hgvsp: ENSP00000429979.1:p.Arg171Ter
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000383592
  ensembl transcript: ENST00000400782
  gene symbol: GFRA2
  hgvsc: ENST00000400782.4:c.511C>T
  hgvsp: ENSP00000383592.4:p.Arg171Ter
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: true
  consequence: stop_gained
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428518
  ensembl transcript: ENST00000524240
  gene symbol: GFRA2
  hgvsc: ENST00000524240.1:c.826C>T
  hgvsp: ENSP00000428518.1:p.Arg276Ter
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000306654
  ensembl transcript: ENST00000306793
  gene symbol: GFRA2
  hgvsc: ENST00000306793.4:c.*880C>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429445
  ensembl transcript: ENST00000517328
  gene symbol: GFRA2
  hgvsc: ENST00000517328.1:c.826C>T
  hgvsp: ENSP00000429445.1:p.Arg276Ter
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429206
  ensembl transcript: ENST00000518077
  gene symbol: GFRA2
  hgvsc: ENST00000518077.1:c.427C>T
  hgvsp: ENSP00000429206.1:p.Arg143Ter
  variant of: http://identifiers.org/hgnc/4244
canonical: true
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29315
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5120
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15655
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1120
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3320
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3009
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 290
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15681
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 654
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 980
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 120
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 434
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2000
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1087
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 7470
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28358
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Arg276Ter
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum

8-21563527-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21563527
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 21563527
    reference: chr 8
allele count: 5
allele frequency: 1.759695924544239e-4
allele num: 28414
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429206
  ensembl transcript: ENST00000518077
  gene symbol: GFRA2
  hgvsc: ENST00000518077.1:c.422A>G
  hgvsp: ENSP00000429206.1:p.Asn141Ser
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000383592
  ensembl transcript: ENST00000400782
  gene symbol: GFRA2
  hgvsc: ENST00000400782.4:c.506A>G
  hgvsp: ENSP00000383592.4:p.Asn169Ser
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429445
  ensembl transcript: ENST00000517328
  gene symbol: GFRA2
  hgvsc: ENST00000517328.1:c.821A>G
  hgvsp: ENSP00000429445.1:p.Asn274Ser
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429979
  ensembl transcript: ENST00000517892
  gene symbol: GFRA2
  hgvsc: ENST00000517892.1:c.506A>G
  hgvsp: ENSP00000429979.1:p.Asn169Ser
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428518
  ensembl transcript: ENST00000524240
  gene symbol: GFRA2
  hgvsc: ENST00000524240.1:c.821A>G
  hgvsp: ENSP00000428518.1:p.Asn274Ser
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000306654
  ensembl transcript: ENST00000306793
  gene symbol: GFRA2
  hgvsc: ENST00000306793.4:c.*875A>G
  variant of: http://identifiers.org/hgnc/4244
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28020
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1118
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3372
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2990
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17070
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4913
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 958
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17178
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 476
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27574
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 273
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 436
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 393
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Asn274Ser
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ

8-21563533-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21563533
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 21563533
    reference: chr 8
allele count: 0
allele frequency: 0.0e0
allele num: 27578
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429206
  ensembl transcript: ENST00000518077
  gene symbol: GFRA2
  hgvsc: ENST00000518077.1:c.416A>G
  hgvsp: ENSP00000429206.1:p.His139Arg
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000306654
  ensembl transcript: ENST00000306793
  gene symbol: GFRA2
  hgvsc: ENST00000306793.4:c.*869A>G
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428518
  ensembl transcript: ENST00000524240
  gene symbol: GFRA2
  hgvsc: ENST00000524240.1:c.815A>G
  hgvsp: ENSP00000428518.1:p.His272Arg
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000383592
  ensembl transcript: ENST00000400782
  gene symbol: GFRA2
  hgvsc: ENST00000400782.4:c.500A>G
  hgvsp: ENSP00000383592.4:p.His167Arg
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429979
  ensembl transcript: ENST00000517892
  gene symbol: GFRA2
  hgvsc: ENST00000517892.1:c.500A>G
  hgvsp: ENSP00000429979.1:p.His167Arg
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429445
  ensembl transcript: ENST00000517328
  gene symbol: GFRA2
  hgvsc: ENST00000517328.1:c.815A>G
  hgvsp: ENSP00000429445.1:p.His272Arg
  variant of: http://identifiers.org/hgnc/4244
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2948
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1117
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4589
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20189
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3407
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24916
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1101
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 719
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1087
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 253
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 949
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20358
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 401
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23735
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2039
  bin: 1.75e1
  variant carriers: 0
hgvs: p.His272Arg
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
reference allele: T
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD

8-21563541-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21563541
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 21563541
    reference: chr 8
allele count: 1
allele frequency: 3.840245775729647e-5
allele num: 26040
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429979
  ensembl transcript: ENST00000517892
  gene symbol: GFRA2
  hgvsc: ENST00000517892.1:c.492C>T
  hgvsp: ENST00000517892.1:c.492C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428518
  ensembl transcript: ENST00000524240
  gene symbol: GFRA2
  hgvsc: ENST00000524240.1:c.807C>T
  hgvsp: ENST00000524240.1:c.807C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429445
  ensembl transcript: ENST00000517328
  gene symbol: GFRA2
  hgvsc: ENST00000517328.1:c.807C>T
  hgvsp: ENST00000517328.1:c.807C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000383592
  ensembl transcript: ENST00000400782
  gene symbol: GFRA2
  hgvsc: ENST00000400782.4:c.492C>T
  hgvsp: ENST00000400782.4:c.492C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000306654
  ensembl transcript: ENST00000306793
  gene symbol: GFRA2
  hgvsc: ENST00000306793.4:c.*861C>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429206
  ensembl transcript: ENST00000518077
  gene symbol: GFRA2
  hgvsc: ENST00000518077.1:c.408C>T
  hgvsp: ENST00000518077.1:c.408C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4244
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2879
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1108
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20815
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3135
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24428
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4226
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24473
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18664
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1108
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1086
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 288
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 296
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Ala269Ala
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: QD
site quality: ReadPosRankSum

8-21563544-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21563544
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 21563544
    reference: chr 8
allele count: 1
allele frequency: 3.884400248601616e-5
allele num: 25744
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000383592
  ensembl transcript: ENST00000400782
  gene symbol: GFRA2
  hgvsc: ENST00000400782.4:c.489G>A
  hgvsp: ENST00000400782.4:c.489G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428518
  ensembl transcript: ENST00000524240
  gene symbol: GFRA2
  hgvsc: ENST00000524240.1:c.804G>A
  hgvsp: ENST00000524240.1:c.804G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000306654
  ensembl transcript: ENST00000306793
  gene symbol: GFRA2
  hgvsc: ENST00000306793.4:c.*858G>A
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429979
  ensembl transcript: ENST00000517892
  gene symbol: GFRA2
  hgvsc: ENST00000517892.1:c.489G>A
  hgvsp: ENST00000517892.1:c.489G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429206
  ensembl transcript: ENST00000518077
  gene symbol: GFRA2
  hgvsc: ENST00000518077.1:c.405G>A
  hgvsp: ENST00000518077.1:c.405G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429445
  ensembl transcript: ENST00000517328
  gene symbol: GFRA2
  hgvsc: ENST00000517328.1:c.804G>A
  hgvsp: ENST00000517328.1:c.804G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4244
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19799
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1119
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4114
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25577
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2997
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2889
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1085
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 18047
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 902
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 928
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1169
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2028
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25717
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Leu268Leu
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: BaseQRankSum

8-21563550-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21563550
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 21563550
    reference: chr 8
allele count: 0
allele frequency: 0.0e0
allele num: 24576
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428518
  ensembl transcript: ENST00000524240
  gene symbol: GFRA2
  hgvsc: ENST00000524240.1:c.798C>A
  hgvsp: ENST00000524240.1:c.798C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429445
  ensembl transcript: ENST00000517328
  gene symbol: GFRA2
  hgvsc: ENST00000517328.1:c.798C>A
  hgvsp: ENST00000517328.1:c.798C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429979
  ensembl transcript: ENST00000517892
  gene symbol: GFRA2
  hgvsc: ENST00000517892.1:c.483C>A
  hgvsp: ENST00000517892.1:c.483C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429206
  ensembl transcript: ENST00000518077
  gene symbol: GFRA2
  hgvsc: ENST00000518077.1:c.399C>A
  hgvsp: ENST00000518077.1:c.399C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000383592
  ensembl transcript: ENST00000400782
  gene symbol: GFRA2
  hgvsc: ENST00000400782.4:c.483C>A
  hgvsp: ENST00000400782.4:c.483C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000306654
  ensembl transcript: ENST00000306793
  gene symbol: GFRA2
  hgvsc: ENST00000306793.4:c.*852C>A
  variant of: http://identifiers.org/hgnc/4244
canonical: true
consequence: synonymous
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28488
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1067
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2735
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3895
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2823
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16899
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 303
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 280
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1109
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6125
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 363
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1083
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ser266Ser
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: DP

8-21563553-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21563553
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 21563553
    reference: chr 8
allele count: 1
allele frequency: 4.111842105263158e-5
allele num: 24320
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000383592
  ensembl transcript: ENST00000400782
  gene symbol: GFRA2
  hgvsc: ENST00000400782.4:c.480G>A
  hgvsp: ENST00000400782.4:c.480G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429979
  ensembl transcript: ENST00000517892
  gene symbol: GFRA2
  hgvsc: ENST00000517892.1:c.480G>A
  hgvsp: ENST00000517892.1:c.480G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000306654
  ensembl transcript: ENST00000306793
  gene symbol: GFRA2
  hgvsc: ENST00000306793.4:c.*849G>A
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428518
  ensembl transcript: ENST00000524240
  gene symbol: GFRA2
  hgvsc: ENST00000524240.1:c.795G>A
  hgvsp: ENST00000524240.1:c.795G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429206
  ensembl transcript: ENST00000518077
  gene symbol: GFRA2
  hgvsc: ENST00000518077.1:c.396G>A
  hgvsp: ENST00000518077.1:c.396G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428721
  ensembl transcript: ENST00000522071
  gene symbol: GFRA2
  hgvsc: ENST00000522071.1:c.795G>A
  hgvsp: ENST00000522071.1:c.795G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429445
  ensembl transcript: ENST00000517328
  gene symbol: GFRA2
  hgvsc: ENST00000517328.1:c.795G>A
  hgvsp: ENST00000517328.1:c.795G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4244
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29463
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2792
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3781
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15857
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2695
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1062
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1036
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6005
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1094
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 274
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 4.75e1
  variant carriers: 0
hgvs: c.795G>A
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
population: East Asian
population: Latino
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum

8-21563559-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21563559
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 21563559
    reference: chr 8
allele count: 1
allele frequency: 4.330879168471199e-5
allele num: 23090
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429206
  ensembl transcript: ENST00000518077
  gene symbol: GFRA2
  hgvsc: ENST00000518077.1:c.396-6C>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428721
  ensembl transcript: ENST00000522071
  gene symbol: GFRA2
  hgvsc: ENST00000522071.1:c.795-6C>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429979
  ensembl transcript: ENST00000517892
  gene symbol: GFRA2
  hgvsc: ENST00000517892.1:c.480-6C>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428518
  ensembl transcript: ENST00000524240
  gene symbol: GFRA2
  hgvsc: ENST00000524240.1:c.795-6C>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000383592
  ensembl transcript: ENST00000400782
  gene symbol: GFRA2
  hgvsc: ENST00000400782.4:c.480-6C>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429445
  ensembl transcript: ENST00000517328
  gene symbol: GFRA2
  hgvsc: ENST00000517328.1:c.795-6C>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000306654
  ensembl transcript: ENST00000306793
  gene symbol: GFRA2
  hgvsc: ENST00000306793.4:c.*849-6C>T
  variant of: http://identifiers.org/hgnc/4244
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1033
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3366
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2657
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31956
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2635
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12979
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1124
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32057
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1206
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1429
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11333
  bin: 2.25e1
  variant carriers: 0
hgvs: c.795-6C>T
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum

8-21563559-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21563559
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 21563559
    reference: chr 8
allele count: 1
allele frequency: 4.330879168471199e-5
allele num: 23090
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000306654
  ensembl transcript: ENST00000306793
  gene symbol: GFRA2
  hgvsc: ENST00000306793.4:c.*849-6C>A
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428721
  ensembl transcript: ENST00000522071
  gene symbol: GFRA2
  hgvsc: ENST00000522071.1:c.795-6C>A
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428518
  ensembl transcript: ENST00000524240
  gene symbol: GFRA2
  hgvsc: ENST00000524240.1:c.795-6C>A
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429445
  ensembl transcript: ENST00000517328
  gene symbol: GFRA2
  hgvsc: ENST00000517328.1:c.795-6C>A
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000383592
  ensembl transcript: ENST00000400782
  gene symbol: GFRA2
  hgvsc: ENST00000400782.4:c.480-6C>A
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429206
  ensembl transcript: ENST00000518077
  gene symbol: GFRA2
  hgvsc: ENST00000518077.1:c.396-6C>A
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429979
  ensembl transcript: ENST00000517892
  gene symbol: GFRA2
  hgvsc: ENST00000517892.1:c.480-6C>A
  variant of: http://identifiers.org/hgnc/4244
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 596
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1033
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 417
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12979
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2635
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31956
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2657
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3366
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1206
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1429
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 273
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 347
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11333
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 263
  bin: 7.25e1
  variant carriers: 0
hgvs: c.795-6C>A
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum

8-21563564-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21563564
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 21563564
    reference: chr 8
allele count: 2
allele frequency: 9.107468123861566e-5
allele num: 21960
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000306654
  ensembl transcript: ENST00000306793
  gene symbol: GFRA2
  hgvsc: ENST00000306793.4:c.*849-11C>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429979
  ensembl transcript: ENST00000517892
  gene symbol: GFRA2
  hgvsc: ENST00000517892.1:c.480-11C>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428721
  ensembl transcript: ENST00000522071
  gene symbol: GFRA2
  hgvsc: ENST00000522071.1:c.795-11C>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429445
  ensembl transcript: ENST00000517328
  gene symbol: GFRA2
  hgvsc: ENST00000517328.1:c.795-11C>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000383592
  ensembl transcript: ENST00000400782
  gene symbol: GFRA2
  hgvsc: ENST00000400782.4:c.480-11C>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428518
  ensembl transcript: ENST00000524240
  gene symbol: GFRA2
  hgvsc: ENST00000524240.1:c.795-11C>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429206
  ensembl transcript: ENST00000518077
  gene symbol: GFRA2
  hgvsc: ENST00000518077.1:c.396-11C>T
  variant of: http://identifiers.org/hgnc/4244
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 33946
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2683
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10397
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 418
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1002
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2401
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2910
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1197
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8651
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 729
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 362
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD

8-21563572-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21563572
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 21563572
    reference: chr 8
allele count: 19
allele frequency: 9.306426332288401e-4
allele num: 20416
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429445
  ensembl transcript: ENST00000517328
  gene symbol: GFRA2
  hgvsc: ENST00000517328.1:c.795-19G>A
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429206
  ensembl transcript: ENST00000518077
  gene symbol: GFRA2
  hgvsc: ENST00000518077.1:c.396-19G>A
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428518
  ensembl transcript: ENST00000524240
  gene symbol: GFRA2
  hgvsc: ENST00000524240.1:c.795-19G>A
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428721
  ensembl transcript: ENST00000522071
  gene symbol: GFRA2
  hgvsc: ENST00000522071.1:c.795-19G>A
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000306654
  ensembl transcript: ENST00000306793
  gene symbol: GFRA2
  hgvsc: ENST00000306793.4:c.*849-19G>A
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429979
  ensembl transcript: ENST00000517892
  gene symbol: GFRA2
  hgvsc: ENST00000517892.1:c.480-19G>A
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000383592
  ensembl transcript: ENST00000400782
  gene symbol: GFRA2
  hgvsc: ENST00000400782.4:c.480-19G>A
  variant of: http://identifiers.org/hgnc/4244
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 673
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 595
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7710
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2813
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35283
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2169
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 949
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2026
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 275
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 234
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3660
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33831
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1380
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 309
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 504
  bin: 2.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: African
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum

8-21563579-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21563579
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 21563579
    reference: chr 8
allele count: 5
allele frequency: 2.542717656631408e-4
allele num: 19664
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429445
  ensembl transcript: ENST00000517328
  gene symbol: GFRA2
  hgvsc: ENST00000517328.1:c.795-26C>G
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428518
  ensembl transcript: ENST00000524240
  gene symbol: GFRA2
  hgvsc: ENST00000524240.1:c.795-26C>G
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429979
  ensembl transcript: ENST00000517892
  gene symbol: GFRA2
  hgvsc: ENST00000517892.1:c.480-26C>G
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428721
  ensembl transcript: ENST00000522071
  gene symbol: GFRA2
  hgvsc: ENST00000522071.1:c.795-26C>G
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000306654
  ensembl transcript: ENST00000306793
  gene symbol: GFRA2
  hgvsc: ENST00000306793.4:c.*849-26C>G
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429206
  ensembl transcript: ENST00000518077
  gene symbol: GFRA2
  hgvsc: ENST00000518077.1:c.396-26C>G
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000383592
  ensembl transcript: ENST00000400782
  gene symbol: GFRA2
  hgvsc: ENST00000400782.4:c.480-26C>G
  variant of: http://identifiers.org/hgnc/4244
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3027
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1649
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35270
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6123
  bin: 7.5e0
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1067
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1574
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 900
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 324
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 699
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 270
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1565
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 474
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3778
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: QD

8-21563586-CAG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21563586
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 21563584
    reference: chr 8
allele count: 0
allele frequency: 0.0e0
allele num: 19006
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000306654
  ensembl transcript: ENST00000306793
  gene symbol: GFRA2
  hgvsc: ENST00000306793.4:c.*849-35_*849-34delCT
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429979
  ensembl transcript: ENST00000517892
  gene symbol: GFRA2
  hgvsc: ENST00000517892.1:c.480-35_480-34delCT
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428721
  ensembl transcript: ENST00000522071
  gene symbol: GFRA2
  hgvsc: ENST00000522071.1:c.795-35_795-34delCT
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429206
  ensembl transcript: ENST00000518077
  gene symbol: GFRA2
  hgvsc: ENST00000518077.1:c.396-35_396-34delCT
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428518
  ensembl transcript: ENST00000524240
  gene symbol: GFRA2
  hgvsc: ENST00000524240.1:c.795-35_795-34delCT
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429445
  ensembl transcript: ENST00000517328
  gene symbol: GFRA2
  hgvsc: ENST00000517328.1:c.795-35_795-34delCT
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000383592
  ensembl transcript: ENST00000400782
  gene symbol: GFRA2
  hgvsc: ENST00000400782.4:c.480-35_480-34delCT
  variant of: http://identifiers.org/hgnc/4244
canonical: true
consequence: intron
filter: VQSRTrancheINDEL96.00to97.00
genotype depth: GenotypeDepth
  all individuals: 34324
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 848
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5247
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1296
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1004
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1732
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3067
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1889
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29627
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3512
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 488
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 758
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 270
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 714
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5697
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
reference allele: CAG
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: QD

8-21563589-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21563589
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 21563589
    reference: chr 8
allele count: 0
allele frequency: 0.0e0
allele num: 18934
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000306654
  ensembl transcript: ENST00000306793
  gene symbol: GFRA2
  hgvsc: ENST00000306793.4:c.*849-36C>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429979
  ensembl transcript: ENST00000517892
  gene symbol: GFRA2
  hgvsc: ENST00000517892.1:c.480-36C>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428518
  ensembl transcript: ENST00000524240
  gene symbol: GFRA2
  hgvsc: ENST00000524240.1:c.795-36C>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429206
  ensembl transcript: ENST00000518077
  gene symbol: GFRA2
  hgvsc: ENST00000518077.1:c.396-36C>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428721
  ensembl transcript: ENST00000522071
  gene symbol: GFRA2
  hgvsc: ENST00000522071.1:c.795-36C>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429445
  ensembl transcript: ENST00000517328
  gene symbol: GFRA2
  hgvsc: ENST00000517328.1:c.795-36C>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000383592
  ensembl transcript: ENST00000400782
  gene symbol: GFRA2
  hgvsc: ENST00000400782.4:c.480-36C>T
  variant of: http://identifiers.org/hgnc/4244
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 834
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34050
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1195
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1887
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5118
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3043
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 779
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1187
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 242
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1978
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 321
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 713
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 483
  bin: 6.75e1
  variant carriers: 1
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
reference allele: G
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD

8-21563865-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21563865
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 21563865
    reference: chr 8
allele count: 1
allele frequency: 8.116883116883117e-5
allele num: 12320
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428721
  ensembl transcript: ENST00000522071
  gene symbol: GFRA2
  hgvsc: ENST00000522071.1:c.795-312G>A
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428518
  ensembl transcript: ENST00000524240
  gene symbol: GFRA2
  hgvsc: ENST00000524240.1:c.795-312G>A
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000306654
  ensembl transcript: ENST00000306793
  gene symbol: GFRA2
  hgvsc: ENST00000306793.4:c.*849-312G>A
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429979
  ensembl transcript: ENST00000517892
  gene symbol: GFRA2
  hgvsc: ENST00000517892.1:c.480-312G>A
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429206
  ensembl transcript: ENST00000518077
  gene symbol: GFRA2
  hgvsc: ENST00000518077.1:c.396-312G>A
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000383592
  ensembl transcript: ENST00000400782
  gene symbol: GFRA2
  hgvsc: ENST00000400782.4:c.480-312G>A
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429445
  ensembl transcript: ENST00000517328
  gene symbol: GFRA2
  hgvsc: ENST00000517328.1:c.795-312G>A
  variant of: http://identifiers.org/hgnc/4244
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2818
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 858
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 787
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 710
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3941
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 154
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
population: European (Finnish)
population: African
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: MQ

8-21563894-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21563894
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 21563894
    reference: chr 8
allele count: 25
allele frequency: 2.030539311241066e-3
allele num: 12312
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000383592
  ensembl transcript: ENST00000400782
  gene symbol: GFRA2
  hgvsc: ENST00000400782.4:c.480-341G>A
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429979
  ensembl transcript: ENST00000517892
  gene symbol: GFRA2
  hgvsc: ENST00000517892.1:c.480-341G>A
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429206
  ensembl transcript: ENST00000518077
  gene symbol: GFRA2
  hgvsc: ENST00000518077.1:c.396-341G>A
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428518
  ensembl transcript: ENST00000524240
  gene symbol: GFRA2
  hgvsc: ENST00000524240.1:c.795-341G>A
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428721
  ensembl transcript: ENST00000522071
  gene symbol: GFRA2
  hgvsc: ENST00000522071.1:c.795-341G>A
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000306654
  ensembl transcript: ENST00000306793
  gene symbol: GFRA2
  hgvsc: ENST00000306793.4:c.*849-341G>A
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429445
  ensembl transcript: ENST00000517328
  gene symbol: GFRA2
  hgvsc: ENST00000517328.1:c.795-341G>A
  variant of: http://identifiers.org/hgnc/4244
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 507
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2607
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 284
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 263
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2232
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3948
  bin: 9.75e1
  variant carriers: 25
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 216
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: African
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum

8-21563906-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21563906
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 21563906
    reference: chr 8
allele count: 1
allele frequency: 8.130081300813008e-5
allele num: 12300
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429445
  ensembl transcript: ENST00000517328
  gene symbol: GFRA2
  hgvsc: ENST00000517328.1:c.795-353C>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428721
  ensembl transcript: ENST00000522071
  gene symbol: GFRA2
  hgvsc: ENST00000522071.1:c.795-353C>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000383592
  ensembl transcript: ENST00000400782
  gene symbol: GFRA2
  hgvsc: ENST00000400782.4:c.480-353C>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429206
  ensembl transcript: ENST00000518077
  gene symbol: GFRA2
  hgvsc: ENST00000518077.1:c.396-353C>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428518
  ensembl transcript: ENST00000524240
  gene symbol: GFRA2
  hgvsc: ENST00000524240.1:c.795-353C>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000306654
  ensembl transcript: ENST00000306793
  gene symbol: GFRA2
  hgvsc: ENST00000306793.4:c.*849-353C>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429979
  ensembl transcript: ENST00000517892
  gene symbol: GFRA2
  hgvsc: ENST00000517892.1:c.480-353C>T
  variant of: http://identifiers.org/hgnc/4244
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2663
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3945
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 216
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 284
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 311
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
reference allele: G
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum

8-21563906-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21563906
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 21563906
    reference: chr 8
allele count: 15
allele frequency: 1.219512195121951e-3
allele num: 12300
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429445
  ensembl transcript: ENST00000517328
  gene symbol: GFRA2
  hgvsc: ENST00000517328.1:c.795-353C>G
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000306654
  ensembl transcript: ENST00000306793
  gene symbol: GFRA2
  hgvsc: ENST00000306793.4:c.*849-353C>G
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428721
  ensembl transcript: ENST00000522071
  gene symbol: GFRA2
  hgvsc: ENST00000522071.1:c.795-353C>G
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000383592
  ensembl transcript: ENST00000400782
  gene symbol: GFRA2
  hgvsc: ENST00000400782.4:c.480-353C>G
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429979
  ensembl transcript: ENST00000517892
  gene symbol: GFRA2
  hgvsc: ENST00000517892.1:c.480-353C>G
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429206
  ensembl transcript: ENST00000518077
  gene symbol: GFRA2
  hgvsc: ENST00000518077.1:c.396-353C>G
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428518
  ensembl transcript: ENST00000524240
  gene symbol: GFRA2
  hgvsc: ENST00000524240.1:c.795-353C>G
  variant of: http://identifiers.org/hgnc/4244
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2663
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 712
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2354
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 754
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 261
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 276
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 311
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: Latino
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum

8-21563966-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21563966
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 21563966
    reference: chr 8
allele count: 1
allele frequency: 8.155276463872126e-5
allele num: 12262
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000306654
  ensembl transcript: ENST00000306793
  gene symbol: GFRA2
  hgvsc: ENST00000306793.4:c.*849-413C>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429445
  ensembl transcript: ENST00000517328
  gene symbol: GFRA2
  hgvsc: ENST00000517328.1:c.795-413C>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428721
  ensembl transcript: ENST00000522071
  gene symbol: GFRA2
  hgvsc: ENST00000522071.1:c.795-413C>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429979
  ensembl transcript: ENST00000517892
  gene symbol: GFRA2
  hgvsc: ENST00000517892.1:c.480-413C>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000383592
  ensembl transcript: ENST00000400782
  gene symbol: GFRA2
  hgvsc: ENST00000400782.4:c.480-413C>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429206
  ensembl transcript: ENST00000518077
  gene symbol: GFRA2
  hgvsc: ENST00000518077.1:c.396-413C>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428518
  ensembl transcript: ENST00000524240
  gene symbol: GFRA2
  hgvsc: ENST00000524240.1:c.795-413C>T
  variant of: http://identifiers.org/hgnc/4244
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 450
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 782
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3554
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 560
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 422
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 856
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 208
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3931
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 264
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: African
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD

8-21608059-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21608059
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 21608059
    reference: chr 8
allele count: 2
allele frequency: 1.05241001894338e-4
allele num: 19004
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428518
  ensembl transcript: ENST00000524240
  gene symbol: GFRA2
  hgvsc: ENST00000524240.1:c.794+41G>A
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000383592
  ensembl transcript: ENST00000400782
  gene symbol: GFRA2
  hgvsc: ENST00000400782.4:c.479+41G>A
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000306654
  ensembl transcript: ENST00000306793
  gene symbol: GFRA2
  hgvsc: ENST00000306793.4:c.*848+41G>A
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429206
  ensembl transcript: ENST00000518077
  gene symbol: GFRA2
  hgvsc: ENST00000518077.1:c.395+41G>A
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429979
  ensembl transcript: ENST00000517892
  gene symbol: GFRA2
  hgvsc: ENST00000517892.1:c.479+41G>A
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429445
  ensembl transcript: ENST00000517328
  gene symbol: GFRA2
  hgvsc: ENST00000517328.1:c.794+41G>A
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428721
  ensembl transcript: ENST00000522071
  gene symbol: GFRA2
  hgvsc: ENST00000522071.1:c.794+41G>A
  variant of: http://identifiers.org/hgnc/4244
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26552
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1255
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 696
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1584
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21104
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5678
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5250
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20281
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1316
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 390
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 331
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: C
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: DP

8-21608060-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21608060
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 21608060
    reference: chr 8
allele count: 1
allele frequency: 5.11561285041948e-5
allele num: 19548
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428518
  ensembl transcript: ENST00000524240
  gene symbol: GFRA2
  hgvsc: ENST00000524240.1:c.794+40C>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429206
  ensembl transcript: ENST00000518077
  gene symbol: GFRA2
  hgvsc: ENST00000518077.1:c.395+40C>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428721
  ensembl transcript: ENST00000522071
  gene symbol: GFRA2
  hgvsc: ENST00000522071.1:c.794+40C>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000306654
  ensembl transcript: ENST00000306793
  gene symbol: GFRA2
  hgvsc: ENST00000306793.4:c.*848+40C>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000383592
  ensembl transcript: ENST00000400782
  gene symbol: GFRA2
  hgvsc: ENST00000400782.4:c.479+40C>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429445
  ensembl transcript: ENST00000517328
  gene symbol: GFRA2
  hgvsc: ENST00000517328.1:c.794+40C>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429979
  ensembl transcript: ENST00000517892
  gene symbol: GFRA2
  hgvsc: ENST00000517892.1:c.479+40C>T
  variant of: http://identifiers.org/hgnc/4244
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5722
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1489
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26052
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1428
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21637
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5854
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 417
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15342
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 20617
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2213
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP

8-21608066-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21608066
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 21608066
    reference: chr 8
allele count: 1
allele frequency: 4.863813229571985e-5
allele num: 20560
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429206
  ensembl transcript: ENST00000518077
  gene symbol: GFRA2
  hgvsc: ENST00000518077.1:c.395+34G>A
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428721
  ensembl transcript: ENST00000522071
  gene symbol: GFRA2
  hgvsc: ENST00000522071.1:c.794+34G>A
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429445
  ensembl transcript: ENST00000517328
  gene symbol: GFRA2
  hgvsc: ENST00000517328.1:c.794+34G>A
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429979
  ensembl transcript: ENST00000517892
  gene symbol: GFRA2
  hgvsc: ENST00000517892.1:c.479+34G>A
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000383592
  ensembl transcript: ENST00000400782
  gene symbol: GFRA2
  hgvsc: ENST00000400782.4:c.479+34G>A
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000306654
  ensembl transcript: ENST00000306793
  gene symbol: GFRA2
  hgvsc: ENST00000306793.4:c.*848+34G>A
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428518
  ensembl transcript: ENST00000524240
  gene symbol: GFRA2
  hgvsc: ENST00000524240.1:c.794+34G>A
  variant of: http://identifiers.org/hgnc/4244
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5785
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1263
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23799
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2048
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23929
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2891
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2135
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 122
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 373
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 307
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20218
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum

8-21608075-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21608075
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 21608075
    reference: chr 8
allele count: 0
allele frequency: 0.0e0
allele num: 22892
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000306654
  ensembl transcript: ENST00000306793
  gene symbol: GFRA2
  hgvsc: ENST00000306793.4:c.*848+25G>A
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428518
  ensembl transcript: ENST00000524240
  gene symbol: GFRA2
  hgvsc: ENST00000524240.1:c.794+25G>A
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000383592
  ensembl transcript: ENST00000400782
  gene symbol: GFRA2
  hgvsc: ENST00000400782.4:c.479+25G>A
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428721
  ensembl transcript: ENST00000522071
  gene symbol: GFRA2
  hgvsc: ENST00000522071.1:c.794+25G>A
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429445
  ensembl transcript: ENST00000517328
  gene symbol: GFRA2
  hgvsc: ENST00000517328.1:c.794+25G>A
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429979
  ensembl transcript: ENST00000517892
  gene symbol: GFRA2
  hgvsc: ENST00000517892.1:c.479+25G>A
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429206
  ensembl transcript: ENST00000518077
  gene symbol: GFRA2
  hgvsc: ENST00000518077.1:c.395+25G>A
  variant of: http://identifiers.org/hgnc/4244
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 933
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1164
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19254
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5794
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27986
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3192
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2298
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17414
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2353
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 310
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 303
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2168
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24771
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum

8-21608077-ACCGGGGCTG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21608077
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 21608068
    reference: chr 8
allele count: 33
allele frequency: 1.391465677179963e-3
allele num: 23716
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429206
  ensembl transcript: ENST00000518077
  gene symbol: GFRA2
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429445
  ensembl transcript: ENST00000517328
  gene symbol: GFRA2
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000306654
  ensembl transcript: ENST00000306793
  gene symbol: GFRA2
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000383592
  ensembl transcript: ENST00000400782
  gene symbol: GFRA2
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428721
  ensembl transcript: ENST00000522071
  gene symbol: GFRA2
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429979
  ensembl transcript: ENST00000517892
  gene symbol: GFRA2
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428518
  ensembl transcript: ENST00000524240
  gene symbol: GFRA2
  variant of: http://identifiers.org/hgnc/4244
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3524
  bin: 2.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 1160
  bin: 1.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 285
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5771
  bin: 1.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29052
  bin: 7.5e0
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 982
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17995
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 3.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 3496
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2149
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 483
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 992
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 191
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 330
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16477
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2334
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 903
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2217
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 26047
  bin: 2.25e1
  variant carriers: 1
num of homozygotes: 2
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: Latino
reference allele: ACCGGGGCTG
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ

8-21608079-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21608079
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 21608079
    reference: chr 8
allele count: 0
allele frequency: 0.0e0
allele num: 24088
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000383592
  ensembl transcript: ENST00000400782
  gene symbol: GFRA2
  hgvsc: ENST00000400782.4:c.479+21G>A
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429979
  ensembl transcript: ENST00000517892
  gene symbol: GFRA2
  hgvsc: ENST00000517892.1:c.479+21G>A
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429206
  ensembl transcript: ENST00000518077
  gene symbol: GFRA2
  hgvsc: ENST00000518077.1:c.395+21G>A
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428721
  ensembl transcript: ENST00000522071
  gene symbol: GFRA2
  hgvsc: ENST00000522071.1:c.794+21G>A
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000306654
  ensembl transcript: ENST00000306793
  gene symbol: GFRA2
  hgvsc: ENST00000306793.4:c.*848+21G>A
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429445
  ensembl transcript: ENST00000517328
  gene symbol: GFRA2
  hgvsc: ENST00000517328.1:c.794+21G>A
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428518
  ensembl transcript: ENST00000524240
  gene symbol: GFRA2
  hgvsc: ENST00000524240.1:c.794+21G>A
  variant of: http://identifiers.org/hgnc/4244
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5902
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1088
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1221
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3725
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16896
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29726
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2116
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 995
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2320
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2125
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 331
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 247
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1240
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: C
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum

8-21608080-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21608080
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 21608080
    reference: chr 8
allele count: 10
allele frequency: 3.940420836945386e-4
allele num: 25378
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428721
  ensembl transcript: ENST00000522071
  gene symbol: GFRA2
  hgvsc: ENST00000522071.1:c.794+20C>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429206
  ensembl transcript: ENST00000518077
  gene symbol: GFRA2
  hgvsc: ENST00000518077.1:c.395+20C>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429445
  ensembl transcript: ENST00000517328
  gene symbol: GFRA2
  hgvsc: ENST00000517328.1:c.794+20C>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428518
  ensembl transcript: ENST00000524240
  gene symbol: GFRA2
  hgvsc: ENST00000524240.1:c.794+20C>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000383592
  ensembl transcript: ENST00000400782
  gene symbol: GFRA2
  hgvsc: ENST00000400782.4:c.479+20C>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000306654
  ensembl transcript: ENST00000306793
  gene symbol: GFRA2
  hgvsc: ENST00000306793.4:c.*848+20C>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429979
  ensembl transcript: ENST00000517892
  gene symbol: GFRA2
  hgvsc: ENST00000517892.1:c.479+20C>T
  variant of: http://identifiers.org/hgnc/4244
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30654
  bin: 7.5e0
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 15603
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5815
  bin: 1.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1209
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4272
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1148
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1804
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 571
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 329
  bin: 9.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14585
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 963
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 294
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4489
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ

8-21608083-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21608083
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 21608083
    reference: chr 8
allele count: 5
allele frequency: 1.860811313732788e-4
allele num: 26870
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428721
  ensembl transcript: ENST00000522071
  gene symbol: GFRA2
  hgvsc: ENST00000522071.1:c.794+17C>A
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429979
  ensembl transcript: ENST00000517892
  gene symbol: GFRA2
  hgvsc: ENST00000517892.1:c.479+17C>A
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000306654
  ensembl transcript: ENST00000306793
  gene symbol: GFRA2
  hgvsc: ENST00000306793.4:c.*848+17C>A
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428518
  ensembl transcript: ENST00000524240
  gene symbol: GFRA2
  hgvsc: ENST00000524240.1:c.794+17C>A
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429445
  ensembl transcript: ENST00000517328
  gene symbol: GFRA2
  hgvsc: ENST00000517328.1:c.794+17C>A
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000383592
  ensembl transcript: ENST00000400782
  gene symbol: GFRA2
  hgvsc: ENST00000400782.4:c.479+17C>A
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429206
  ensembl transcript: ENST00000518077
  gene symbol: GFRA2
  hgvsc: ENST00000518077.1:c.395+17C>A
  variant of: http://identifiers.org/hgnc/4244
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31344
  bin: 7.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1197
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5932
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1297
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14425
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4632
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 13511
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2344
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2179
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 8.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 802
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 343
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1606
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28678
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 308
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
reference allele: G
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum

8-21608088-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21608088
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 21608088
    reference: chr 8
allele count: 2
allele frequency: 6.644959797993223e-5
allele num: 30098
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000383592
  ensembl transcript: ENST00000400782
  gene symbol: GFRA2
  hgvsc: ENST00000400782.4:c.479+12G>C
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428721
  ensembl transcript: ENST00000522071
  gene symbol: GFRA2
  hgvsc: ENST00000522071.1:c.794+12G>C
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429445
  ensembl transcript: ENST00000517328
  gene symbol: GFRA2
  hgvsc: ENST00000517328.1:c.794+12G>C
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429206
  ensembl transcript: ENST00000518077
  gene symbol: GFRA2
  hgvsc: ENST00000518077.1:c.395+12G>C
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428518
  ensembl transcript: ENST00000524240
  gene symbol: GFRA2
  hgvsc: ENST00000524240.1:c.794+12G>C
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429979
  ensembl transcript: ENST00000517892
  gene symbol: GFRA2
  hgvsc: ENST00000517892.1:c.479+12G>C
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000306654
  ensembl transcript: ENST00000306793
  gene symbol: GFRA2
  hgvsc: ENST00000306793.4:c.*848+12G>C
  variant of: http://identifiers.org/hgnc/4244
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5998
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11433
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5969
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32936
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1568
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2178
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 979
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 325
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 659
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 341
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 351
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31232
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
reference allele: C
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum

8-21608088-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21608088
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 21608088
    reference: chr 8
allele count: 19
allele frequency: 6.312711808093561e-4
allele num: 30098
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428721
  ensembl transcript: ENST00000522071
  gene symbol: GFRA2
  hgvsc: ENST00000522071.1:c.794+12G>A
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428518
  ensembl transcript: ENST00000524240
  gene symbol: GFRA2
  hgvsc: ENST00000524240.1:c.794+12G>A
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000383592
  ensembl transcript: ENST00000400782
  gene symbol: GFRA2
  hgvsc: ENST00000400782.4:c.479+12G>A
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429979
  ensembl transcript: ENST00000517892
  gene symbol: GFRA2
  hgvsc: ENST00000517892.1:c.479+12G>A
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000306654
  ensembl transcript: ENST00000306793
  gene symbol: GFRA2
  hgvsc: ENST00000306793.4:c.*848+12G>A
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429445
  ensembl transcript: ENST00000517328
  gene symbol: GFRA2
  hgvsc: ENST00000517328.1:c.794+12G>A
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429206
  ensembl transcript: ENST00000518077
  gene symbol: GFRA2
  hgvsc: ENST00000518077.1:c.395+12G>A
  variant of: http://identifiers.org/hgnc/4244
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32936
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 1.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5998
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1568
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11433
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5969
  bin: 1.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2178
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 325
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10962
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 351
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 8.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 6227
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 341
  bin: 9.75e1
  variant carriers: 16
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: QD

8-21608089-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21608089
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 21608089
    reference: chr 8
allele count: 0
allele frequency: 0.0e0
allele num: 31290
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429979
  ensembl transcript: ENST00000517892
  gene symbol: GFRA2
  hgvsc: ENST00000517892.1:c.479+11C>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428721
  ensembl transcript: ENST00000522071
  gene symbol: GFRA2
  hgvsc: ENST00000522071.1:c.794+11C>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429445
  ensembl transcript: ENST00000517328
  gene symbol: GFRA2
  hgvsc: ENST00000517328.1:c.794+11C>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000383592
  ensembl transcript: ENST00000400782
  gene symbol: GFRA2
  hgvsc: ENST00000400782.4:c.479+11C>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429206
  ensembl transcript: ENST00000518077
  gene symbol: GFRA2
  hgvsc: ENST00000518077.1:c.395+11C>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428518
  ensembl transcript: ENST00000524240
  gene symbol: GFRA2
  hgvsc: ENST00000524240.1:c.794+11C>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000306654
  ensembl transcript: ENST00000306793
  gene symbol: GFRA2
  hgvsc: ENST00000306793.4:c.*848+11C>T
  variant of: http://identifiers.org/hgnc/4244
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 33376
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10589
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1209
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5853
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6536
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1634
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 717
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1322
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 343
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 10162
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1058
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: Latino
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum

8-21608090-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21608090
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 21608090
    reference: chr 8
allele count: 2
allele frequency: 6.318316800404372e-5
allele num: 31654
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000383592
  ensembl transcript: ENST00000400782
  gene symbol: GFRA2
  hgvsc: ENST00000400782.4:c.479+10G>A
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429445
  ensembl transcript: ENST00000517328
  gene symbol: GFRA2
  hgvsc: ENST00000517328.1:c.794+10G>A
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429979
  ensembl transcript: ENST00000517892
  gene symbol: GFRA2
  hgvsc: ENST00000517892.1:c.479+10G>A
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428721
  ensembl transcript: ENST00000522071
  gene symbol: GFRA2
  hgvsc: ENST00000522071.1:c.794+10G>A
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429206
  ensembl transcript: ENST00000518077
  gene symbol: GFRA2
  hgvsc: ENST00000518077.1:c.395+10G>A
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000306654
  ensembl transcript: ENST00000306793
  gene symbol: GFRA2
  hgvsc: ENST00000306793.4:c.*848+10G>A
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428518
  ensembl transcript: ENST00000524240
  gene symbol: GFRA2
  hgvsc: ENST00000524240.1:c.794+10G>A
  variant of: http://identifiers.org/hgnc/4244
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6637
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33345
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1345
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9957
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6104
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1815
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2264
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1111
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6650
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 965
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31375
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1809
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9661
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 328
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD

8-21608091-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21608091
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 21608091
    reference: chr 8
allele count: 27
allele frequency: 8.143813717801774e-4
allele num: 33154
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429206
  ensembl transcript: ENST00000518077
  gene symbol: GFRA2
  hgvsc: ENST00000518077.1:c.395+9C>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429445
  ensembl transcript: ENST00000517328
  gene symbol: GFRA2
  hgvsc: ENST00000517328.1:c.794+9C>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428518
  ensembl transcript: ENST00000524240
  gene symbol: GFRA2
  hgvsc: ENST00000524240.1:c.794+9C>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000383592
  ensembl transcript: ENST00000400782
  gene symbol: GFRA2
  hgvsc: ENST00000400782.4:c.479+9C>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428721
  ensembl transcript: ENST00000522071
  gene symbol: GFRA2
  hgvsc: ENST00000522071.1:c.794+9C>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429979
  ensembl transcript: ENST00000517892
  gene symbol: GFRA2
  hgvsc: ENST00000517892.1:c.479+9C>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000306654
  ensembl transcript: ENST00000306793
  gene symbol: GFRA2
  hgvsc: ENST00000306793.4:c.*848+9C>T
  variant of: http://identifiers.org/hgnc/4244
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9638
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1396
  bin: 1.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 1867
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 405
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6156
  bin: 1.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6893
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33274
  bin: 7.5e0
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 372
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 413
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 119
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1018
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1621
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31635
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2211
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 299
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
reference allele: G
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: DP

8-21608101-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21608101
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 21608101
    reference: chr 8
allele count: 2
allele frequency: 4.527960153950645e-5
allele num: 44170
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000306654
  ensembl transcript: ENST00000306793
  gene symbol: GFRA2
  hgvsc: ENST00000306793.4:c.*847C>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428518
  ensembl transcript: ENST00000524240
  gene symbol: GFRA2
  hgvsc: ENST00000524240.1:c.793C>T
  hgvsp: ENSP00000428518.1:p.Arg265Trp
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428721
  ensembl transcript: ENST00000522071
  gene symbol: GFRA2
  hgvsc: ENST00000522071.1:c.793C>T
  hgvsp: ENSP00000428721.1:p.Arg265Trp
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000383592
  ensembl transcript: ENST00000400782
  gene symbol: GFRA2
  hgvsc: ENST00000400782.4:c.478C>T
  hgvsp: ENSP00000383592.4:p.Arg160Trp
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429445
  ensembl transcript: ENST00000517328
  gene symbol: GFRA2
  hgvsc: ENST00000517328.1:c.793C>T
  hgvsp: ENSP00000429445.1:p.Arg265Trp
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429979
  ensembl transcript: ENST00000517892
  gene symbol: GFRA2
  hgvsc: ENST00000517892.1:c.478C>T
  hgvsp: ENSP00000429979.1:p.Arg160Trp
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429206
  ensembl transcript: ENST00000518077
  gene symbol: GFRA2
  hgvsc: ENST00000518077.1:c.394C>T
  hgvsp: ENSP00000429206.1:p.Arg132Trp
  variant of: http://identifiers.org/hgnc/4244
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1631
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5188
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6248
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11204
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32397
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2677
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5143
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11757
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2281
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 333
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31735
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Arg265Trp
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: QD
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum

8-21608105-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21608105
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 21608105
    reference: chr 8
allele count: 2486
allele frequency: 4.891582385581048e-2
allele num: 50822
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000383592
  ensembl transcript: ENST00000400782
  gene symbol: GFRA2
  hgvsc: ENST00000400782.4:c.474G>C
  hgvsp: ENST00000400782.4:c.474G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000306654
  ensembl transcript: ENST00000306793
  gene symbol: GFRA2
  hgvsc: ENST00000306793.4:c.*843G>C
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429206
  ensembl transcript: ENST00000518077
  gene symbol: GFRA2
  hgvsc: ENST00000518077.1:c.390G>C
  hgvsp: ENST00000518077.1:c.390G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428721
  ensembl transcript: ENST00000522071
  gene symbol: GFRA2
  hgvsc: ENST00000522071.1:c.789G>C
  hgvsp: ENST00000522071.1:c.789G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429979
  ensembl transcript: ENST00000517892
  gene symbol: GFRA2
  hgvsc: ENST00000517892.1:c.474G>C
  hgvsp: ENST00000517892.1:c.474G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428518
  ensembl transcript: ENST00000524240
  gene symbol: GFRA2
  hgvsc: ENST00000524240.1:c.789G>C
  hgvsp: ENST00000524240.1:c.789G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429445
  ensembl transcript: ENST00000517328
  gene symbol: GFRA2
  hgvsc: ENST00000517328.1:c.789G>C
  hgvsp: ENST00000517328.1:c.789G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4244
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 30308
  bin: 7.5e0
  variant carriers: 462
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 5.25e1
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 5.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 2166
  bin: 1.75e1
  variant carriers: 595
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 3.75e1
  variant carriers: 108
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12868
  bin: 2.25e1
  variant carriers: 272
genotype depth: GenotypeDepth
  all individuals: 6689
  bin: 1.25e1
  variant carriers: 891
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4036
  bin: 2.5e0
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2931
  bin: 2.75e1
  variant carriers: 175
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 4.25e1
  variant carriers: 66
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 4.75e1
  variant carriers: 50
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 3.25e1
  variant carriers: 143
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 6.25e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 6.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 486
  bin: 4.25e1
  variant carriers: 18
genotype quality: GenotypeQuality
  all individuals: 2140
  bin: 3.25e1
  variant carriers: 23
genotype quality: GenotypeQuality
  all individuals: 29452
  bin: 2.25e1
  variant carriers: 28
genotype quality: GenotypeQuality
  all individuals: 1162
  bin: 6.75e1
  variant carriers: 28
genotype quality: GenotypeQuality
  all individuals: 661
  bin: 2.5e0
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 3932
  bin: 7.5e0
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 2186
  bin: 2.75e1
  variant carriers: 17
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 8.25e1
  variant carriers: 50
genotype quality: GenotypeQuality
  all individuals: 754
  bin: 1.75e1
  variant carriers: 16
hgvs: p.Leu263Leu
num of homozygotes: 102
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: QD

http://identifiers.org/exac.variant/8-21608117-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21608117
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 21608117
    reference: chr 8
allele count: 1
allele frequency: 1.567692983006208e-5
allele num: 63788
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429206
  ensembl transcript: ENST00000518077
  gene symbol: GFRA2
  hgvsc: ENST00000518077.1:c.378G>T
  hgvsp: ENST00000518077.1:c.378G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000383592
  ensembl transcript: ENST00000400782
  gene symbol: GFRA2
  hgvsc: ENST00000400782.4:c.462G>T
  hgvsp: ENST00000400782.4:c.462G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000306654
  ensembl transcript: ENST00000306793
  gene symbol: GFRA2
  hgvsc: ENST00000306793.4:c.*831G>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428721
  ensembl transcript: ENST00000522071
  gene symbol: GFRA2
  hgvsc: ENST00000522071.1:c.777G>T
  hgvsp: ENST00000522071.1:c.777G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429445
  ensembl transcript: ENST00000517328
  gene symbol: GFRA2
  hgvsc: ENST00000517328.1:c.777G>T
  hgvsp: ENST00000517328.1:c.777G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429979
  ensembl transcript: ENST00000517892
  gene symbol: GFRA2
  hgvsc: ENST00000517892.1:c.462G>T
  hgvsp: ENST00000517892.1:c.462G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428518
  ensembl transcript: ENST00000524240
  gene symbol: GFRA2
  hgvsc: ENST00000524240.1:c.777G>T
  hgvsp: ENST00000524240.1:c.777G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4244
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7090
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2319
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2324
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17725
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25758
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4081
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 733
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 805
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 355
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 743
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25592
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 422
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18362
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 302
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 257
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2785
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Arg259Arg
num of homozygotes: 0
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: C
site quality: QD
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum

8-21608118-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21608118
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 21608118
    reference: chr 8
allele count: 1
allele frequency: 1.531065315246348e-5
allele num: 65314
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428518
  ensembl transcript: ENST00000524240
  gene symbol: GFRA2
  hgvsc: ENST00000524240.1:c.776G>A
  hgvsp: ENSP00000428518.1:p.Arg259Gln
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428721
  ensembl transcript: ENST00000522071
  gene symbol: GFRA2
  hgvsc: ENST00000522071.1:c.776G>A
  hgvsp: ENSP00000428721.1:p.Arg259Gln
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000306654
  ensembl transcript: ENST00000306793
  gene symbol: GFRA2
  hgvsc: ENST00000306793.4:c.*830G>A
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429206
  ensembl transcript: ENST00000518077
  gene symbol: GFRA2
  hgvsc: ENST00000518077.1:c.377G>A
  hgvsp: ENSP00000429206.1:p.Arg126Gln
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429445
  ensembl transcript: ENST00000517328
  gene symbol: GFRA2
  hgvsc: ENST00000517328.1:c.776G>A
  hgvsp: ENSP00000429445.1:p.Arg259Gln
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000383592
  ensembl transcript: ENST00000400782
  gene symbol: GFRA2
  hgvsc: ENST00000400782.4:c.461G>A
  hgvsp: ENSP00000383592.4:p.Arg154Gln
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429979
  ensembl transcript: ENST00000517892
  gene symbol: GFRA2
  hgvsc: ENST00000517892.1:c.461G>A
  hgvsp: ENSP00000429979.1:p.Arg154Gln
  variant of: http://identifiers.org/hgnc/4244
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4381
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 783
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2373
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24817
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18365
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7156
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2121
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1702
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 795
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 456
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2490
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 355
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 729
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1594
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 498
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Arg259Gln
num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: ReadPosRankSum

8-21608119-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21608119
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 21608119
    reference: chr 8
allele count: 3
allele frequency: 4.419433723225597e-5
allele num: 67882
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429206
  ensembl transcript: ENST00000518077
  gene symbol: GFRA2
  hgvsc: ENST00000518077.1:c.376C>T
  hgvsp: ENSP00000429206.1:p.Arg126Trp
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000306654
  ensembl transcript: ENST00000306793
  gene symbol: GFRA2
  hgvsc: ENST00000306793.4:c.*829C>T
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428518
  ensembl transcript: ENST00000524240
  gene symbol: GFRA2
  hgvsc: ENST00000524240.1:c.775C>T
  hgvsp: ENSP00000428518.1:p.Arg259Trp
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429445
  ensembl transcript: ENST00000517328
  gene symbol: GFRA2
  hgvsc: ENST00000517328.1:c.775C>T
  hgvsp: ENSP00000429445.1:p.Arg259Trp
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428721
  ensembl transcript: ENST00000522071
  gene symbol: GFRA2
  hgvsc: ENST00000522071.1:c.775C>T
  hgvsp: ENSP00000428721.1:p.Arg259Trp
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429979
  ensembl transcript: ENST00000517892
  gene symbol: GFRA2
  hgvsc: ENST00000517892.1:c.460C>T
  hgvsp: ENSP00000429979.1:p.Arg154Trp
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000383592
  ensembl transcript: ENST00000400782
  gene symbol: GFRA2
  hgvsc: ENST00000400782.4:c.460C>T
  hgvsp: ENSP00000383592.4:p.Arg154Trp
  variant of: http://identifiers.org/hgnc/4244
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1964
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24041
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4547
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19380
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6985
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2331
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2716
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2015
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2471
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 540
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24189
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 684
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21045
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 323
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Arg259Trp
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD

8-21608125-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21608125
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 21608125
    reference: chr 8
allele count: 2
allele frequency: 2.617938111943034e-5
allele num: 76396
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000383592
  ensembl transcript: ENST00000400782
  gene symbol: GFRA2
  hgvsc: ENST00000400782.4:c.454G>A
  hgvsp: ENSP00000383592.4:p.Val152Met
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000306654
  ensembl transcript: ENST00000306793
  gene symbol: GFRA2
  hgvsc: ENST00000306793.4:c.*823G>A
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428721
  ensembl transcript: ENST00000522071
  gene symbol: GFRA2
  hgvsc: ENST00000522071.1:c.769G>A
  hgvsp: ENSP00000428721.1:p.Val257Met
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428518
  ensembl transcript: ENST00000524240
  gene symbol: GFRA2
  hgvsc: ENST00000524240.1:c.769G>A
  hgvsp: ENSP00000428518.1:p.Val257Met
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429445
  ensembl transcript: ENST00000517328
  gene symbol: GFRA2
  hgvsc: ENST00000517328.1:c.769G>A
  hgvsp: ENSP00000429445.1:p.Val257Met
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429979
  ensembl transcript: ENST00000517892
  gene symbol: GFRA2
  hgvsc: ENST00000517892.1:c.454G>A
  hgvsp: ENSP00000429979.1:p.Val152Met
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429206
  ensembl transcript: ENST00000518077
  gene symbol: GFRA2
  hgvsc: ENST00000518077.1:c.370G>A
  hgvsp: ENSP00000429206.1:p.Val124Met
  variant of: http://identifiers.org/hgnc/4244
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23253
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6286
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1445
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5473
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20265
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 907
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2414
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 475
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 676
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1501
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 317
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 292
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2487
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 875
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 347
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25202
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Val257Met
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: DP

8-21608126-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21608126
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 21608126
    reference: chr 8
allele count: 2
allele frequency: 2.54958951608791e-5
allele num: 78444
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428518
  ensembl transcript: ENST00000524240
  gene symbol: GFRA2
  hgvsc: ENST00000524240.1:c.768C>T
  hgvsp: ENST00000524240.1:c.768C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428721
  ensembl transcript: ENST00000522071
  gene symbol: GFRA2
  hgvsc: ENST00000522071.1:c.768C>T
  hgvsp: ENST00000522071.1:c.768C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000383592
  ensembl transcript: ENST00000400782
  gene symbol: GFRA2
  hgvsc: ENST00000400782.4:c.453C>T
  hgvsp: ENST00000400782.4:c.453C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429979
  ensembl transcript: ENST00000517892
  gene symbol: GFRA2
  hgvsc: ENST00000517892.1:c.453C>T
  hgvsp: ENST00000517892.1:c.453C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429445
  ensembl transcript: ENST00000517328
  gene symbol: GFRA2
  hgvsc: ENST00000517328.1:c.768C>T
  hgvsp: ENST00000517328.1:c.768C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429206
  ensembl transcript: ENST00000518077
  gene symbol: GFRA2
  hgvsc: ENST00000518077.1:c.369C>T
  hgvsp: ENST00000518077.1:c.369C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000306654
  ensembl transcript: ENST00000306793
  gene symbol: GFRA2
  hgvsc: ENST00000306793.4:c.*822C>T
  variant of: http://identifiers.org/hgnc/4244
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2395
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 24167
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 940
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6081
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1337
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5694
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19448
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 746
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 875
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19708
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 274
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 360
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 2424
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 381
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 463
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26200
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Gly256Gly
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

8-21608130-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21608130
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 21608130
    reference: chr 8
allele count: 2
allele frequency: 2.375748360733631e-5
allele num: 84184
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428518
  ensembl transcript: ENST00000524240
  gene symbol: GFRA2
  hgvsc: ENST00000524240.1:c.764G>A
  hgvsp: ENSP00000428518.1:p.Arg255His
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429979
  ensembl transcript: ENST00000517892
  gene symbol: GFRA2
  hgvsc: ENST00000517892.1:c.449G>A
  hgvsp: ENSP00000429979.1:p.Arg150His
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000306654
  ensembl transcript: ENST00000306793
  gene symbol: GFRA2
  hgvsc: ENST00000306793.4:c.*818G>A
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000383592
  ensembl transcript: ENST00000400782
  gene symbol: GFRA2
  hgvsc: ENST00000400782.4:c.449G>A
  hgvsp: ENSP00000383592.4:p.Arg150His
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429206
  ensembl transcript: ENST00000518077
  gene symbol: GFRA2
  hgvsc: ENST00000518077.1:c.365G>A
  hgvsp: ENSP00000429206.1:p.Arg122His
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428721
  ensembl transcript: ENST00000522071
  gene symbol: GFRA2
  hgvsc: ENST00000522071.1:c.764G>A
  hgvsp: ENSP00000428721.1:p.Arg255His
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429445
  ensembl transcript: ENST00000517328
  gene symbol: GFRA2
  hgvsc: ENST00000517328.1:c.764G>A
  hgvsp: ENSP00000429445.1:p.Arg255His
  variant of: http://identifiers.org/hgnc/4244
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6345
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1005
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1100
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27010
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2153
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5455
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17003
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 663
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 404
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 311
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17407
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1459
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1932
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Arg255His
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff

8-21608146-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 21608146
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 21608146
    reference: chr 8
allele count: 2
allele frequency: 1.926411096127914e-5
allele num: 103820
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429979
  ensembl transcript: ENST00000517892
  gene symbol: GFRA2
  hgvsc: ENST00000517892.1:c.433A>C
  hgvsp: ENSP00000429979.1:p.Asn145His
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428518
  ensembl transcript: ENST00000524240
  gene symbol: GFRA2
  hgvsc: ENST00000524240.1:c.748A>C
  hgvsp: ENSP00000428518.1:p.Asn250His
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000306654
  ensembl transcript: ENST00000306793
  gene symbol: GFRA2
  hgvsc: ENST00000306793.4:c.*802A>C
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000383592
  ensembl transcript: ENST00000400782
  gene symbol: GFRA2
  hgvsc: ENST00000400782.4:c.433A>C
  hgvsp: ENSP00000383592.4:p.Asn145His
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000428721
  ensembl transcript: ENST00000522071
  gene symbol: GFRA2
  hgvsc: ENST00000522071.1:c.748A>C
  hgvsp: ENSP00000428721.1:p.Asn250His
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429445
  ensembl transcript: ENST00000517328
  gene symbol: GFRA2
  hgvsc: ENST00000517328.1:c.748A>C
  hgvsp: ENSP00000429445.1:p.Asn250His
  variant of: http://identifiers.org/hgnc/4244
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000168546
  ensembl protein: ENSP00000429206
  ensembl transcript: ENST00000518077
  gene symbol: GFRA2
  hgvsc: ENST00000518077.1:c.349A>C
  hgvsp: ENSP00000429206.1:p.Asn117His
  variant of: http://identifiers.org/hgnc/4244
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 37486
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1304
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8992
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1110
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8031
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2649
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 442
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 323
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 360
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 686
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 548
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8386
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 504
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Asn250His
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum

GenotypeQuality
all individuals: 338
bin: 7.25e1
variant carriers: 3

GenotypeQuality
all individuals: 75
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1297
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1340
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 521
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1143
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3054
bin: 7.5e0
variant carriers: 0

East Asian
type: Population
allele count: 5
allele frequency: 6.760411032990806e-4
allele num: 7396
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 13
allele frequency: 2.342342342342342e-4
allele num: 55500
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 9
allele frequency: 2.208047105004907e-3
allele num: 4076
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9304
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8216
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7690
num of homozygotes: 0

Other
type: Population
allele count: 5
allele frequency: 8.090614886731391e-3
allele num: 618
num of homozygotes: 1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.23e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.44e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.24e-1

FS
type: SiteQuality
SIO_000300: 1.314e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.2e-2

QD
type: SiteQuality
SIO_000300: 1.213e1

DP
type: SiteQuality
SIO_000300: 9.23915e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.5e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 2.95e-1

GenotypeQuality
all individuals: 1622
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 314
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1661
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 314
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 323
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 324
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7308
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7584
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9170
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7618
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4002
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 596
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.825883727724218e-5
allele num: 54768
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -6.685e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.03e0

MQRankSum
type: SiteQuality
SIO_000300: 6.5e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.87e0

DP
type: SiteQuality
SIO_000300: 8.98714e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.614e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 8.98e0

GenotypeQuality
all individuals: 5273
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1040
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 329
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 17932
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 146
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 311
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1757
bin: 1.25e1
variant carriers: 0

African
type: Population
allele count: 2
allele frequency: 2.653927813163482e-4
allele num: 7536
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.376273052573631e-4
allele num: 7266
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.840129545119977e-5
allele num: 54344
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 2.697599136768276e-4
allele num: 7414
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3964
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9076
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 586
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.92e0

DP
type: SiteQuality
SIO_000300: 8.94622e5

QD
type: SiteQuality
SIO_000300: 1.047e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 5.29e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.76e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.2e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 2.09e-1

FS
type: SiteQuality
SIO_000300: 8.75e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.04e-1

GenotypeQuality
all individuals: 17746
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 482
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7663
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1856
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1780
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1864
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 269
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1029
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7342
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.383891502906172e-4
allele num: 7226
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 2.205071664829107e-4
allele num: 9070
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 584
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.847882326853426e-5
allele num: 54116
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7528
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3956
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 8.89581e5

VQSLOD
type: SiteQuality
SIO_000300: 3.55e-1

FS
type: SiteQuality
SIO_000300: 6.191e0

MQRankSum
type: SiteQuality
SIO_000300: -4.23e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.4e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.268e0

QD
type: SiteQuality
SIO_000300: 9.529999999999999e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.16e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.71e-1

GenotypeQuality
all individuals: 8188
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2318
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5349
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3727
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 100
bin: 9.25e1
variant carriers: 2

GenotypeQuality
all individuals: 143
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 7806
bin: 3.25e1
variant carriers: 0

South Asian
type: Population
allele count: 13
allele frequency: 1.829439909935266e-3
allele num: 7106
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3912
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 53784
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8976
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7438
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 570
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7182
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.27e-1

DP
type: SiteQuality
SIO_000300: 8.79184e5

BaseQRankSum
type: SiteQuality
SIO_000300: 2.48e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 7.94e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.9e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -4.95e-1

QD
type: SiteQuality
SIO_000300: 1.282e1

FS
type: SiteQuality
SIO_000300: 5.322e0

MQRankSum
type: SiteQuality
SIO_000300: -2.77e-1

GenotypeQuality
all individuals: 5934
bin: 3.75e1
variant carriers: 6

GenotypeQuality
all individuals: 2637
bin: 4.75e1
variant carriers: 7

GenotypeQuality
all individuals: 2291
bin: 4.25e1
variant carriers: 2

GenotypeQuality
all individuals: 2196
bin: 1.25e1
variant carriers: 2

GenotypeQuality
all individuals: 947
bin: 6.75e1
variant carriers: 14

GenotypeQuality
all individuals: 1256
bin: 9.75e1
variant carriers: 944

GenotypeQuality
all individuals: 157
bin: 8.25e1
variant carriers: 20

GenotypeQuality
all individuals: 6949
bin: 6.25e1
variant carriers: 9

African
type: Population
allele count: 17
allele frequency: 2.300405953991881e-3
allele num: 7390
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 3.508771929824561e-3
allele num: 570
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 42
allele frequency: 1.087519419989643e-2
allele num: 3862
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7138
num of homozygotes: 0

South Asian
type: Population
allele count: 12
allele frequency: 1.713796058269066e-3
allele num: 7002
num of homozygotes: 0

Latino
type: Population
allele count: 27
allele frequency: 3.041910770617395e-3
allele num: 8876
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 911
allele frequency: 1.70759137769447e-2
allele num: 53350
num of homozygotes: 11

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.7e-3

VQSLOD
type: SiteQuality
SIO_000300: 5.94e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.98e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.8e-2

DP
type: SiteQuality
SIO_000300: 8.75293e5

MQRankSum
type: SiteQuality
SIO_000300: 9.3e-2

QD
type: SiteQuality
SIO_000300: 1.344e1

GenotypeQuality
all individuals: 3807
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1333
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5594
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 146
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6164
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 235
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 253
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 16
allele frequency: 3.043445179943696e-4
allele num: 52572
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7066
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8714
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7302
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6718
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3808
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 554
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.73e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.03e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -4.66e-1

DP
type: SiteQuality
SIO_000300: 8.68788e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.97e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.43e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.034e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.3372e1

QD
type: SiteQuality
SIO_000300: 1.032e1

GenotypeQuality
all individuals: 8651
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 355
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1089
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 812
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 594
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 288
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 218
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25573
bin: 7.5e0
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6734
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2192
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 176
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 624
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.15473441108545e-4
allele num: 8660
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 410
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 438
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.125e-1

QD
type: SiteQuality
SIO_000300: 4.97e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.16e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.45e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.81e-1

DP
type: SiteQuality
SIO_000300: 3.58617e5

MQRankSum
type: SiteQuality
SIO_000300: -6.860000000000001e-1

FS
type: SiteQuality
SIO_000300: 1.937e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.116e0

GenotypeQuality
all individuals: 218
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 276
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 351
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 288
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1089
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 792
bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 626
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6774
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 406
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2192
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 438
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 176
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.27e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.27e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.27e-1

QD
type: SiteQuality
SIO_000300: 8.27e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.31e-2

VQSLOD
type: SiteQuality
SIO_000300: 7.52e-1

DP
type: SiteQuality
SIO_000300: 3.61642e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 32270
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1316
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 809
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1090
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 299
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4886
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 460
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 9.057971014492754e-4
allele num: 2208
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7186
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 438
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 184
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8918
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 642
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.37e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.06e-1

FS
type: SiteQuality
SIO_000300: 1.863e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.45e-2

MQRankSum
type: SiteQuality
SIO_000300: 3.22e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.88e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.28e-1

DP
type: SiteQuality
SIO_000300: 4.15599e5

QD
type: SiteQuality
SIO_000300: 1.142e1

GenotypeQuality
all individuals: 294
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1839
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 109
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 836
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 219
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5088
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 133
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 378
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7268
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2220
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 188
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 452
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 476
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 664
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.112594570538496e-4
allele num: 8988
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 4.27086e5

BaseQRankSum
type: SiteQuality
SIO_000300: -1.537e0

MQRankSum
type: SiteQuality
SIO_000300: 3.76e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.31e-2

QD
type: SiteQuality
SIO_000300: 1.368e1

VQSLOD
type: SiteQuality
SIO_000300: 4.02e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.06e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.06e-1

GenotypeQuality
all individuals: 1650
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 871
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 300
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 221
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5707
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1457
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 480
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 194
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 686
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2234
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 2.127659574468085e-3
allele num: 470
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7426
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.184837229626393e-4
allele num: 9154
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.79e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.493e0

MQRankSum
type: SiteQuality
SIO_000300: 1.01e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.93e-2

FS
type: SiteQuality
SIO_000300: 3.008e0

QD
type: SiteQuality
SIO_000300: 1.356e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 4.47091e5

VQSLOD
type: SiteQuality
SIO_000300: -1.566e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.72e-1

GenotypeQuality
all individuals: 1540
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5773
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 57
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variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1088
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 303
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 880
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 219
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 194
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7446
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 478
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.08837614279495e-4
allele num: 9188
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 480
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 688
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2236
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 8.69e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.87e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 5.83e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.58e-1

QD
type: SiteQuality
SIO_000300: 2.949e1

VQSLOD
type: SiteQuality
SIO_000300: -2.354e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 4.49979e5

GenotypeQuality
all individuals: 1766
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1394
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6021
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11917
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 289
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 301
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 488
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 194
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9294
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2248
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 700
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7534
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 488
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.74e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.644e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 7.33e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.7e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.7e-2

DP
type: SiteQuality
SIO_000300: 4.60558e5

QD
type: SiteQuality
SIO_000300: 1.434e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.95e-1

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 492
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 494
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7646
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9426
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 194
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 734
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2266
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.22e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.22e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.38e-2

MQ
type: SiteQuality
SIO_000300: 5.763e1

MQRankSum
type: SiteQuality
SIO_000300: 9.56e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.92e0

DP
type: SiteQuality
SIO_000300: 4.76041e5

VQSLOD
type: SiteQuality
SIO_000300: -1.537e0

QD
type: SiteQuality
SIO_000300: 4.37e0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 314
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variant carriers: 0

GenotypeQuality
all individuals: 1090
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 514
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2442
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.25344697919278e-4
allele num: 7978
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 214
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 960
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10792
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -9.997e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.11e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.02e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.29e-1

QD
type: SiteQuality
SIO_000300: 8.19e0

FS
type: SiteQuality
SIO_000300: 3.562e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.377e0

DP
type: SiteQuality
SIO_000300: 5.54083e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.43e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 960
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2442
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 214
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 514
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 650
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 9.266123054114158e-5
allele num: 10792
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7978
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.562e0

VQSLOD
type: SiteQuality
SIO_000300: -9.997e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.11e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.29e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.02e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.43e-1

QD
type: SiteQuality
SIO_000300: 8.19e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.377e0

DP
type: SiteQuality
SIO_000300: 5.54083e5

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 293
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 686
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 534
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11140
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8006
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2492
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 214
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1046
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.447e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 5.25e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.47e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -3.58e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.58e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.5e-1

VQSLOD
type: SiteQuality
SIO_000300: -8.653e-1

DP
type: SiteQuality
SIO_000300: 5.68268e5

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 53
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GenotypeQuality
all individuals: 47
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 212
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 544
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2568
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8050
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 8.818342151675485e-4
allele num: 1134
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 8.552856654122477e-5
allele num: 11692
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.305483028720627e-3
allele num: 766
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.019e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.27e-1

MQ
type: SiteQuality
SIO_000300: 5.928e1

VQSLOD
type: SiteQuality
SIO_000300: -1.263e-1

QD
type: SiteQuality
SIO_000300: 9.32e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.16e-2

DP
type: SiteQuality
SIO_000300: 5.83518e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.44e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.359e0

MQRankSum
type: SiteQuality
SIO_000300: 4.91e-1

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 7829
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 938
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12714
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8142
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1298
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2714
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 548
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 232
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.728e1

DP
type: SiteQuality
SIO_000300: 6.05261e5

MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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QD
type: SiteQuality
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FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -5.5e-1

ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1090
bin: 9.75e1
variant carriers: 2

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 954
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 2746
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 1.501501501501501e-3
allele num: 1332
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 230
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.227596366314756e-4
allele num: 8146
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 538
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12824
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -1.517e0

ClippingRankSum
type: SiteQuality
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FS
type: SiteQuality
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MQRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.211e1

VQSLOD
type: SiteQuality
SIO_000300: 5.02e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.71e-2

ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1340
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12890
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 230
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.226993865030675e-4
allele num: 8150
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 974
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 2748
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 546
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.551e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.69e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.533e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.87e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.29e-1

DP
type: SiteQuality
SIO_000300: 6.09242e5

MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.875e1

QD
type: SiteQuality
SIO_000300: 1.24e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 7.631257631257631e-5
allele num: 13104
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 228
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Latino
type: Population
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allele num: 1008
num of homozygotes: 0

South Asian
type: Population
allele count: 0
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African
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 1404
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 538
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BaseQRankSum
type: SiteQuality
SIO_000300: -1.91e-1

VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 1.311e0

ReadPosRankSum
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MQRankSum
type: SiteQuality
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ClippingRankSum
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DP
type: SiteQuality
SIO_000300: 6.15009e5

QD
type: SiteQuality
SIO_000300: 3.402e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 316
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GenotypeQuality
all individuals: 1089
bin: 9.75e1
variant carriers: 1

Latino
type: Population
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num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 6.297229219143577e-4
allele num: 1588
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13744
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 240
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 554
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2830
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8220
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.57e-2

DP
type: SiteQuality
SIO_000300: 6.21977e5

BaseQRankSum
type: SiteQuality
SIO_000300: 1.0e0

MQRankSum
type: SiteQuality
SIO_000300: -1.945e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -9.321e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.3e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 8.880000000000001e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.12e-1

GenotypeQuality
all individuals: 220
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 147
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8071
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 396
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 344
bin: 3.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8228
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1148
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1608
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 7.24952878062926e-5
allele num: 13794
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 240
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2840
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 562
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.889999999999999e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.96e-1

QD
type: SiteQuality
SIO_000300: 8.390000000000001e0

VQSLOD
type: SiteQuality
SIO_000300: -3.638e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.35e-1

DP
type: SiteQuality
SIO_000300: 6.22191e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.54e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.4e0

GenotypeQuality
all individuals: 469
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12608
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1089
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 57
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 562
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1604
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2842
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1150
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13840
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 2.430133657351154e-4
allele num: 8230
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 240
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.379e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.28e-1

DP
type: SiteQuality
SIO_000300: 6.22744e5

MQRankSum
type: SiteQuality
SIO_000300: 7.31e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.54e-2

VQSLOD
type: SiteQuality
SIO_000300: -2.967e0

QD
type: SiteQuality
SIO_000300: 2.705e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.562e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.42e-1

GenotypeQuality
all individuals: 72
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 314
bin: 7.25e1
variant carriers: 1

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 395
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2884
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 230
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8230
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 5.015763829177415e-4
allele num: 13956
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.818181818181818e-3
allele num: 550
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1190
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1616
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 5.92e-1

QD
type: SiteQuality
SIO_000300: 1.231e1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.2e-2

FS
type: SiteQuality
SIO_000300: 1.204e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 5.629999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.5e-1

DP
type: SiteQuality
SIO_000300: 6.21576e5

GenotypeQuality
all individuals: 122
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2060
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 882
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 295
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7973
bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1616
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13956
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 230
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1190
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 550
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 3.467406380027739e-4
allele num: 2884
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8230
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 5.92e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 1.204e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.5e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.2e-2

QD
type: SiteQuality
SIO_000300: 1.231e1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 5.629999999999999e-1

DP
type: SiteQuality
SIO_000300: 6.21576e5

GenotypeQuality
all individuals: 56
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7968
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 990
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13025
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variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 328
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variant carriers: 0

GenotypeQuality
all individuals: 312
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variant carriers: 0

GenotypeQuality
all individuals: 1089
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2896
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.212415130940834e-4
allele num: 8248
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1190
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 230
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1630
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13988
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 560
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.51e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.05e0

MQ
type: SiteQuality
SIO_000300: 5.914e1

QD
type: SiteQuality
SIO_000300: 7.5e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.49e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.317e0

FS
type: SiteQuality
SIO_000300: 1.062e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.05e0

DP
type: SiteQuality
SIO_000300: 6.21049e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.64e-2

GenotypeQuality
all individuals: 127
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2313
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1089
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1001
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variant carriers: 0

GenotypeQuality
all individuals: 337
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 39
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variant carriers: 1

GenotypeQuality
all individuals: 291
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1178
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 226
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2860
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 516
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 7.144898542440698e-5
allele num: 13996
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 1670
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8268
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.51e-1

DP
type: SiteQuality
SIO_000300: 6.1417e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.76e-2

VQSLOD
type: SiteQuality
SIO_000300: 7.36e-1

MQRankSum
type: SiteQuality
SIO_000300: -9.22e-1

FS
type: SiteQuality
SIO_000300: 3.53e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.98e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.840000000000001e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.538e1

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1090
bin: 9.75e1
variant carriers: 3

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2864
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1646
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1168
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 2.14715144574864e-4
allele num: 13972
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 226
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8276
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 500
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.38e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.473e0

FS
type: SiteQuality
SIO_000300: 3.225e0

MQRankSum
type: SiteQuality
SIO_000300: -5.8e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.69e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.87e-2

QD
type: SiteQuality
SIO_000300: 9.789999999999999e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.18e-1

DP
type: SiteQuality
SIO_000300: 6.08588e5

GenotypeQuality
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bin: 7.75e1
variant carriers: 1

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1618
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 474
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 226
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8270
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 7.042253521126761e-4
allele num: 2840
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1170
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13888
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 6.02577e5

BaseQRankSum
type: SiteQuality
SIO_000300: -8.76e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.82e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.13e-2

QD
type: SiteQuality
SIO_000300: 1.419e1

VQSLOD
type: SiteQuality
SIO_000300: 4.12e-1

FS
type: SiteQuality
SIO_000300: 2.739e0

MQRankSum
type: SiteQuality
SIO_000300: 5.46e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.37e-1

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 4

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 220
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 3.533568904593639e-4
allele num: 2830
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 474
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 6.188118811881188e-4
allele num: 1616
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 2.420721374969741e-4
allele num: 8262
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.47457627118644e-4
allele num: 1180
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13832
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 9.51e0

MQRankSum
type: SiteQuality
SIO_000300: 3.77e-1

FS
type: SiteQuality
SIO_000300: 3.054e0

VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -3.26e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.79e0

DP
type: SiteQuality
SIO_000300: 5.92226e5

ClippingRankSum
type: SiteQuality
SIO_000300: 1.03e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 389
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GenotypeQuality
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GenotypeQuality
all individuals: 34
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variant carriers: 0

GenotypeQuality
all individuals: 219
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 218
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2776
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13366
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8212
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1080
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 1510
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.522e0

MQRankSum
type: SiteQuality
SIO_000300: 3.61e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.29e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.492e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.29e-1

DP
type: SiteQuality
SIO_000300: 5.69854e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.81e-2

QD
type: SiteQuality
SIO_000300: 9.5e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8030
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 934
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 214
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2676
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 1372
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 8.012820512820513e-5
allele num: 12480
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 334
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.86e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.49e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.04e-1

VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -4.64e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 5.37842e5

QD
type: SiteQuality
SIO_000300: 1.057e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.04e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 2648
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 8.084074373484237e-5
allele num: 12370
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 308
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 7988
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 214
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 8.430999999999999e0

MQRankSum
type: SiteQuality
SIO_000300: -3.57e-1

ReadPosRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.01e0

MQ
type: SiteQuality
SIO_000300: 5.966e1

VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -4.8e-2

QD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 5.29742e5

BaseQRankSum
type: SiteQuality
SIO_000300: 1.69e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 2568
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 802
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 250
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 7884
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 1218
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 11650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 204
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 3.1e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.06e-1

QD
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BaseQRankSum
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MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 4.06e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.39e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.92e0

DP
type: SiteQuality
SIO_000300: 5.04548e5

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 238
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2572
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 8.682062858135092e-5
allele num: 11518
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7824
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 206
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1174
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.23e0

VQSLOD
type: SiteQuality
SIO_000300: -1.264e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.03e0

FS
type: SiteQuality
SIO_000300: 6.383e0

DP
type: SiteQuality
SIO_000300: 4.9623e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.43e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.55e-2

QD
type: SiteQuality
SIO_000300: 9.859999999999999e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.87e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 9.218289085545723e-5
allele num: 10848
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7648
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 690
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1056
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2458
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 192
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 198
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.71e-2

DP
type: SiteQuality
SIO_000300: 4.67743e5

ClippingRankSum
type: SiteQuality
SIO_000300: -3.28e-1

MQRankSum
type: SiteQuality
SIO_000300: -5.5e-1

QD
type: SiteQuality
SIO_000300: 1.041e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.38e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.3e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 1056
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2458
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 192
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 198
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 690
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 1.307531380753138e-4
allele num: 7648
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 10848
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.38e0

QD
type: SiteQuality
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MQ
type: SiteQuality
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FS
type: SiteQuality
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ReadPosRankSum
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VQSLOD
type: SiteQuality
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InbreedingCoeff
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SIO_000300: 4.71e-2

DP
type: SiteQuality
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MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
allele frequency: 0.0e0
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African
type: Population
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allele frequency: 8.396305625524769e-4
allele num: 2382
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Latino
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allele frequency: 0.0e0
allele num: 590
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European (Finnish)
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 192
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 10230
num of homozygotes: 0

QD
type: SiteQuality
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BaseQRankSum
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ClippingRankSum
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MQRankSum
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MQ
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InbreedingCoeff
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FS
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ReadPosRankSum
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DP
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 100
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East Asian
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South Asian
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allele count: 15
allele frequency: 2.078137988362427e-3
allele num: 7218
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 492
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African
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allele count: 1
allele frequency: 4.405286343612335e-4
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Other
type: Population
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 3.188775510204081e-4
allele num: 9408
num of homozygotes: 0

VQSLOD
type: SiteQuality
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MQ
type: SiteQuality
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BaseQRankSum
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ReadPosRankSum
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DP
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InbreedingCoeff
type: SiteQuality
SIO_000300: -7.23e-2

MQRankSum
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FS
type: SiteQuality
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QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele num: 7102
num of homozygotes: 0

East Asian
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Other
type: Population
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African
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allele frequency: 9.041591320072332e-4
allele num: 2212
num of homozygotes: 0

Latino
type: Population
allele count: 0
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allele num: 426
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European (Non-Finnish)
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allele frequency: 2.222222222222222e-4
allele num: 9000
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European (Finnish)
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allele num: 78
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ClippingRankSum
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MQRankSum
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ReadPosRankSum
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VQSLOD
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FS
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InbreedingCoeff
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BaseQRankSum
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MQ
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DP
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.656e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 114
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8668
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2186
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 402
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 618
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6894
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 178
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.48028e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.829999999999999e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -7.31e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.31e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.38e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.31e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 9.03e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.97e1

GenotypeQuality
all individuals: 6131
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 217
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1727
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1080
bin: 9.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2186
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6876
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 620
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 398
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 50
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 176
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -2.811e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.58e-1

DP
type: SiteQuality
SIO_000300: 3.42296e5

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.58e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.231e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.870000000000001e-2

QD
type: SiteQuality
SIO_000300: 7.69e0

GenotypeQuality
all individuals: 2071
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 226
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 283
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3622
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 198
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 188
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 132
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 562
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.313025210084034e-4
allele num: 7616
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.64e-1

MQRankSum
type: SiteQuality
SIO_000300: -9.18e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.65e-2

QD
type: SiteQuality
SIO_000300: 1.977e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.25e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.153e0

DP
type: SiteQuality
SIO_000300: 2.88799e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.04e0

MQ
type: SiteQuality
SIO_000300: 5.877e1

GenotypeQuality
all individuals: 149
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 766
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 184
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.75e1
variant carriers: 0

South Asian
type: Population
allele count: 24
allele frequency: 3.150433184562877e-3
allele num: 7618
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 184
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 198
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 7.575757575757576e-3
allele num: 132
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 554
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3622
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.53e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.19e-1

MQ
type: SiteQuality
SIO_000300: 5.988e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.62e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.34e-1

FS
type: SiteQuality
SIO_000300: 2.513e0

QD
type: SiteQuality
SIO_000300: 1.129e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.63e-2

DP
type: SiteQuality
SIO_000300: 2.89305e5

ClippingRankSum
type: SiteQuality
SIO_000300: -3.66e-1

GenotypeQuality
all individuals: 10
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2354
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 276
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 754
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 261
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7618
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.811594202898551e-3
allele num: 552
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3618
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 180
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 198
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 132
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.88e0

QD
type: SiteQuality
SIO_000300: 1.175e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.382e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.19e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.58e-1

DP
type: SiteQuality
SIO_000300: 2.88789e5

MQ
type: SiteQuality
SIO_000300: 5.967e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.32e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.46e-1

GenotypeQuality
all individuals: 17
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 284
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 183
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 216
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3945
bin: 9.75e1
variant carriers: 15

South Asian
type: Population
allele count: 13
allele frequency: 1.706484641638225e-3
allele num: 7618
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 198
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 552
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 5.527915975677169e-4
allele num: 3618
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 132
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 180
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.967e1

VQSLOD
type: SiteQuality
SIO_000300: 4.88e0

DP
type: SiteQuality
SIO_000300: 2.88789e5

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.19e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.32e-1

QD
type: SiteQuality
SIO_000300: 1.175e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.382e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.58e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.46e-1

GenotypeQuality
all individuals: 141
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1091
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2452
bin: 7.5e0
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GenotypeQuality
all individuals: 66
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 204
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GenotypeQuality
all individuals: 143
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
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GenotypeQuality
all individuals: 245
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variant carriers: 0

GenotypeQuality
all individuals: 285
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.313370107696349e-4
allele num: 7614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 194
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 132
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 174
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 548
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3598
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.32e0

DP
type: SiteQuality
SIO_000300: 2.86079e5

BaseQRankSum
type: SiteQuality
SIO_000300: 1.61e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.58e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.75e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.38e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

QD
type: SiteQuality
SIO_000300: 1.33e1

GenotypeQuality
all individuals: 13356
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 450
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 320
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 6382
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1203
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 2167
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 79
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variant carriers: 0

GenotypeQuality
all individuals: 182
bin: 5.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 842
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 768
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2058
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 550
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.025851456709069e-4
allele num: 9748
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 164
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 2.051702913418137e-4
allele num: 4874
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.8e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.589e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.52e-2

MQRankSum
type: SiteQuality
SIO_000300: 6.37e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 1.3074e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.382e1

VQSLOD
type: SiteQuality
SIO_000300: -1.103e0

DP
type: SiteQuality
SIO_000300: 3.82571e5

GenotypeQuality
all individuals: 4144
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 58
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GenotypeQuality
all individuals: 319
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GenotypeQuality
all individuals: 391
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GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
all individuals: 1195
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 556
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 172
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10008
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2078
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.265822784810127e-3
allele num: 790
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5090
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 7.31e-1

QD
type: SiteQuality
SIO_000300: 3.74e0

VQSLOD
type: SiteQuality
SIO_000300: -2.404e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.96e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.31e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.58e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.36e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 3.90108e5

GenotypeQuality
all individuals: 4298
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1125
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 323
bin: 4.25e1
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GenotypeQuality
all individuals: 1611
bin: 2.5e0
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GenotypeQuality
all individuals: 2311
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GenotypeQuality
all individuals: 19525
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GenotypeQuality
all individuals: 60
bin: 5.75e1
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GenotypeQuality
all individuals: 319
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variant carriers: 1

GenotypeQuality
all individuals: 2218
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2154
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.87125748502994e-4
allele num: 5344
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 838
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 596
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 910
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10540
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 178
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -4.924e-1

FS
type: SiteQuality
SIO_000300: 3.081e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.89e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.96e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.51e-1

DP
type: SiteQuality
SIO_000300: 4.14801e5

QD
type: SiteQuality
SIO_000300: 1.615e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -2.47e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.3e0

GenotypeQuality
all individuals: 1016
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 141
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variant carriers: 0

GenotypeQuality
all individuals: 1037
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 320
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 456
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 974
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5994
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 704
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1026
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2310
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 190
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11694
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 8.49e0

VQSLOD
type: SiteQuality
SIO_000300: -5.886e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.370000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.370000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.754e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.38e-2

DP
type: SiteQuality
SIO_000300: 4.61604e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.370000000000001e-1

GenotypeQuality
all individuals: 138
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 1

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 38

GenotypeQuality
all individuals: 90
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 194
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12070
num of homozygotes: 0

South Asian
type: Population
allele count: 33
allele frequency: 5.256451099076139e-3
allele num: 6278
num of homozygotes: 2

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1062
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1008
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2378
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 726
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.06e-1

DP
type: SiteQuality
SIO_000300: 4.74909e5

BaseQRankSum
type: SiteQuality
SIO_000300: 3.12e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.516e0

QD
type: SiteQuality
SIO_000300: 5.78e0

VQSLOD
type: SiteQuality
SIO_000300: 1.25e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.12e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -2.71e-1

MQ
type: SiteQuality
SIO_000300: 4.925e1

GenotypeQuality
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bin: 7.5e0
variant carriers: 1

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 1

GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1096
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2412
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 758
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6328
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12272
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1028
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 194
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.367e1

VQSLOD
type: SiteQuality
SIO_000300: 4.43e0

MQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.25e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -7.27e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 4.87807e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.58e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.22e-1

GenotypeQuality
all individuals: 2292
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 2

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 161
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variant carriers: 1

GenotypeQuality
all individuals: 57
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2504
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 9
allele frequency: 8.19672131147541e-3
allele num: 1098
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1132
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12988
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.196172248803828e-3
allele num: 836
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 210
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.110000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.02e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.41e0

MQRankSum
type: SiteQuality
SIO_000300: 2.67e-1

QD
type: SiteQuality
SIO_000300: 1.199e1

DP
type: SiteQuality
SIO_000300: 5.05147e5

FS
type: SiteQuality
SIO_000300: 3.593e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.01e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.43e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 989
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 201
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 6

GenotypeQuality
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bin: 7.25e1
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

South Asian
type: Population
allele count: 5
allele frequency: 7.267441860465116e-4
allele num: 6880
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1192
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13804
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1266
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 218
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 5.19562e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.0e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.61e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.76e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.49e0

QD
type: SiteQuality
SIO_000300: 1.275e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.6e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.72e-1

GenotypeQuality
all individuals: 1559
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 160
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variant carriers: 0

GenotypeQuality
all individuals: 1174
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2312
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10962
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GenotypeQuality
all individuals: 106
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 6227
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GenotypeQuality
all individuals: 673
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2846
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1342
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 1.284521515735389e-4
allele num: 15570
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1050
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 248
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1432
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.24e0

QD
type: SiteQuality
SIO_000300: 1.332e1

MQRankSum
type: SiteQuality
SIO_000300: 7.7e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -7.67e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.84e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.05e-2

DP
type: SiteQuality
SIO_000300: 5.63308e5

ClippingRankSum
type: SiteQuality
SIO_000300: 1.35e-1

GenotypeQuality
all individuals: 659
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 182
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1174
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 31232
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2312
bin: 2.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 9
allele frequency: 6.706408345752608e-3
allele num: 1342
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1050
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2846
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.314060446780552e-4
allele num: 7610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 248
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 1.396648044692737e-3
allele num: 1432
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 4.49582530507386e-4
allele num: 15570
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.67e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.7e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.05e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.35e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.24e0

DP
type: SiteQuality
SIO_000300: 5.63308e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.84e-1

QD
type: SiteQuality
SIO_000300: 1.332e1

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 324
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GenotypeQuality
all individuals: 324
bin: 4.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 254
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16226
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7836
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1528
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2944
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1388
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1114
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 5.76689e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.22e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.22e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.840000000000001e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 4.058e0

QD
type: SiteQuality
SIO_000300: 5.98e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.840000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.067e0

MQRankSum
type: SiteQuality
SIO_000300: 6.840000000000001e-1

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1004
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GenotypeQuality
all individuals: 692
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1146
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 258
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2980
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1396
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7838
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 1.212415130940834e-4
allele num: 16496
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1540
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.31e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 4.64e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.92e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.33e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.09e-1

DP
type: SiteQuality
SIO_000300: 5.88693e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.33e-1

QD
type: SiteQuality
SIO_000300: 1.272e1

GenotypeQuality
all individuals: 9280
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 2322
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GenotypeQuality
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GenotypeQuality
all individuals: 670
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GenotypeQuality
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GenotypeQuality
all individuals: 1053
bin: 3.75e1
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GenotypeQuality
all individuals: 7215
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GenotypeQuality
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GenotypeQuality
all individuals: 59
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GenotypeQuality
all individuals: 358
bin: 9.75e1
variant carriers: 28

Latino
type: Population
allele count: 2
allele frequency: 1.577287066246057e-3
allele num: 1268
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 9.67741935483871e-4
allele num: 3100
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1618
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 22
allele frequency: 1.267865375749193e-3
allele num: 17352
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 266
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1464
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8086
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.364e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.05e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.2e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.2e-2

MQRankSum
type: SiteQuality
SIO_000300: 2.59e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.98e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 5.96163e5

GenotypeQuality
all individuals: 267
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 447
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 424
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 586
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 556
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1175
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 362
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2281
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1117
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1040
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 139
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 76
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 326
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3842
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2306
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2006
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9672
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 352
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 8.347245409015025e-5
allele num: 23960
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2032
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.617e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.33e-2

DP
type: SiteQuality
SIO_000300: 7.04096e5

BaseQRankSum
type: SiteQuality
SIO_000300: 9.19e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.24e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.95e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.61e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.12e-1

GenotypeQuality
all individuals: 259
bin: 7.25e1
variant carriers: 15

GenotypeQuality
all individuals: 13370
bin: 6.25e1
variant carriers: 37

GenotypeQuality
all individuals: 109
bin: 8.75e1
variant carriers: 57

GenotypeQuality
all individuals: 482
bin: 1.25e1
variant carriers: 12

GenotypeQuality
all individuals: 121
bin: 9.25e1
variant carriers: 65

GenotypeQuality
all individuals: 1101
bin: 3.75e1
variant carriers: 15

GenotypeQuality
all individuals: 306
bin: 5.75e1
variant carriers: 33

GenotypeQuality
all individuals: 339
bin: 5.25e1
variant carriers: 30

GenotypeQuality
all individuals: 217
bin: 7.75e1
variant carriers: 32

GenotypeQuality
all individuals: 2651
bin: 9.75e1
variant carriers: 2361

GenotypeQuality
all individuals: 460
bin: 4.75e1
variant carriers: 26

European (Finnish)
type: Population
allele count: 42
allele frequency: 1.830863121185702e-2
allele num: 2294
num of homozygotes: 1

African
type: Population
allele count: 978
allele frequency: 1.992665036674817e-1
allele num: 4908
num of homozygotes: 64

Latino
type: Population
allele count: 98
allele frequency: 3.942075623491553e-2
allele num: 2486
num of homozygotes: 1

East Asian
type: Population
allele count: 529
allele frequency: 1.664568911264946e-1
allele num: 3178
num of homozygotes: 24

South Asian
type: Population
allele count: 448
allele frequency: 4.298599117251967e-2
allele num: 10422
num of homozygotes: 12

European (Non-Finnish)
type: Population
allele count: 380
allele frequency: 1.400147383935151e-2
allele num: 27140
num of homozygotes: 0

Other
type: Population
allele count: 11
allele frequency: 2.791878172588833e-2
allele num: 394
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 7.59155e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.76e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.72e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.35e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.13e0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.35e-1

QD
type: SiteQuality
SIO_000300: 1.596e1

GenotypeQuality
all individuals: 2346
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 729
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2545
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 341
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1666
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1611
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 684
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 704
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3782
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 476
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5762
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.847542570761433e-5
allele num: 35118
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2996
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11604
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4050
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.155e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.900000000000001e-3

VQSLOD
type: SiteQuality
SIO_000300: 2.65e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.24e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.742e0

MQRankSum
type: SiteQuality
SIO_000300: 1.2e0

DP
type: SiteQuality
SIO_000300: 8.56953e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.35e-1

GenotypeQuality
all individuals: 708
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24821
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 258
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2238
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 703
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 318
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19446
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2718
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 430
bin: 5.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 484
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11762
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3974
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.718803712616019e-4
allele num: 5818
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3104
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4144
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 36028
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.500000000000001e-3

MQRankSum
type: SiteQuality
SIO_000300: -6.3e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -5.37e-1

DP
type: SiteQuality
SIO_000300: 8.76437e5

ClippingRankSum
type: SiteQuality
SIO_000300: -1.07e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: -1.427e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.801e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.182e0

GenotypeQuality
all individuals: 368
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1715
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1672
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 543
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 358
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 729
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 343
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 145
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 221
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 308
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4298
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.662974009373668e-5
allele num: 37552
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4356
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3216
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5956
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.665833749791771e-4
allele num: 12006
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 498
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.21e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 8.92664e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.8e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -4.21e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.21e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.0e0

FS
type: SiteQuality
SIO_000300: 1.45e0

QD
type: SiteQuality
SIO_000300: 1.156e1

VQSLOD
type: SiteQuality
SIO_000300: 9.44e-1

GenotypeQuality
all individuals: 359
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 20531
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 143
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2216
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1895
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 426
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1627
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 374
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 678
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 42518
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 554
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.55860349127182e-4
allele num: 6416
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3732
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5434
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 2.011263073209976e-4
allele num: 4972
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12770
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.97e-1

QD
type: SiteQuality
SIO_000300: 1.46e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.2e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.28e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.1e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.92e0

FS
type: SiteQuality
SIO_000300: 8.29e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.3e-1

MQ
type: SiteQuality
SIO_000300: 5.844e1

DP
type: SiteQuality
SIO_000300: 9.69861e5

GenotypeQuality
all individuals: 1583
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2158
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 307
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 274
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 143
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1994
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1417
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 682
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 443
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6552
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 3.484320557491289e-4
allele num: 5740
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12946
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5114
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3840
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 43684
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.02e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 8.699999999999999e-2

DP
type: SiteQuality
SIO_000300: 9.87369e5

VQSLOD
type: SiteQuality
SIO_000300: 1.11e0

FS
type: SiteQuality
SIO_000300: 2.277e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.7e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -9.57e-1

QD
type: SiteQuality
SIO_000300: 8.91e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.57e-1

GenotypeQuality
all individuals: 791
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 220
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 302
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 209
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2213
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 360
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1134
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 621
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29910
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2156
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6564
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4124
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 618
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.418397626112759e-5
allele num: 13480
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.127387993022167e-5
allele num: 47006
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6882
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.22e-1

DP
type: SiteQuality
SIO_000300: 1.039463e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 4.606e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.606e0

QD
type: SiteQuality
SIO_000300: 9.65e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.2e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.55e0

VQSLOD
type: SiteQuality
SIO_000300: 3.15e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.4e-3

GenotypeQuality
all individuals: 484
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42272
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 567
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2959
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1086
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 170
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 996
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 414
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5302
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8320
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 766
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.736653815428433e-5
allele num: 57582
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.044277360066834e-4
allele num: 9576
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7102
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15172
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.889999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.64e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.13e0

DP
type: SiteQuality
SIO_000300: 1.228419e6

VQSLOD
type: SiteQuality
SIO_000300: 1.03e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.0e-1