9-116356268-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 116356268
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 116356268
    reference: chr 9
allele count: 0
allele frequency: 0.0e0
allele num: 118234
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363255
  ensembl transcript: ENST00000374140
  gene symbol: RGS3
  hgvsc: ENST00000374140.2:c.3081-442C>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000340284
  ensembl transcript: ENST00000343817
  gene symbol: RGS3
  hgvsc: ENST00000343817.5:c.2238-442C>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000496275
  gene symbol: RGS3
  hgvsc: ENST00000496275.1:n.289-442C>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000487344
  gene symbol: RGS3
  hgvsc: ENST00000487344.1:n.2858-442C>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000478599
  gene symbol: RGS3
  hgvsc: ENST00000478599.1:n.2925-442C>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000417994
  ensembl transcript: ENST00000467805
  gene symbol: RGS3
  hgvsc: ENST00000467805.2:c.579-442C>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000436168
  ensembl transcript: ENST00000462403
  gene symbol: RGS3
  hgvsc: ENST00000462403.1:c.69C>G
  hgvsp: ENST00000462403.1:c.69C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000343359
  ensembl transcript: ENST00000342620
  gene symbol: RGS3
  hgvsc: ENST00000342620.5:c.-10-442C>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000420356
  ensembl transcript: ENST00000462143
  gene symbol: RGS3
  hgvsc: ENST00000462143.1:c.1044-442C>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000378141
  ensembl transcript: ENST00000394646
  gene symbol: RGS3
  hgvsc: ENST00000394646.3:c.1260-442C>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000259406
  ensembl transcript: ENST00000350696
  gene symbol: RGS3
  hgvsc: ENST00000350696.5:c.3081-442C>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363249
  ensembl transcript: ENST00000374134
  gene symbol: RGS3
  hgvsc: ENST00000374134.3:c.1044-442C>G
  variant of: http://identifiers.org/hgnc/9999
canonical: false
consequence: synonymous
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 1948
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3353
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2563
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5505
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2234
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4051
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2455
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5129
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1220
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1653
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4340
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5634
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4352
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5314
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3322
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4874
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val23Val
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum

9-116356272-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 116356272
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 116356272
    reference: chr 9
allele count: 2
allele frequency: 1.691446355778827e-5
allele num: 118242
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000436168
  ensembl transcript: ENST00000462403
  gene symbol: RGS3
  hgvsc: ENST00000462403.1:c.73T>G
  hgvsp: ENSP00000436168.1:p.Cys25Gly
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000420356
  ensembl transcript: ENST00000462143
  gene symbol: RGS3
  hgvsc: ENST00000462143.1:c.1044-438T>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000378141
  ensembl transcript: ENST00000394646
  gene symbol: RGS3
  hgvsc: ENST00000394646.3:c.1260-438T>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000417994
  ensembl transcript: ENST00000467805
  gene symbol: RGS3
  hgvsc: ENST00000467805.2:c.579-438T>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363255
  ensembl transcript: ENST00000374140
  gene symbol: RGS3
  hgvsc: ENST00000374140.2:c.3081-438T>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000343359
  ensembl transcript: ENST00000342620
  gene symbol: RGS3
  hgvsc: ENST00000342620.5:c.-10-438T>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000478599
  gene symbol: RGS3
  hgvsc: ENST00000478599.1:n.2925-438T>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363249
  ensembl transcript: ENST00000374134
  gene symbol: RGS3
  hgvsc: ENST00000374134.3:c.1044-438T>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000259406
  ensembl transcript: ENST00000350696
  gene symbol: RGS3
  hgvsc: ENST00000350696.5:c.3081-438T>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000496275
  gene symbol: RGS3
  hgvsc: ENST00000496275.1:n.289-438T>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000487344
  gene symbol: RGS3
  hgvsc: ENST00000487344.1:n.2858-438T>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000340284
  ensembl transcript: ENST00000343817
  gene symbol: RGS3
  hgvsc: ENST00000343817.5:c.2238-438T>G
  variant of: http://identifiers.org/hgnc/9999
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4874
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4340
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5314
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4053
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1221
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 512
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2233
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1746
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1956
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3322
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2567
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5139
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2455
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3354
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5634
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1652
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5503
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Cys25Gly
num of homozygotes: 0
population: Other
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: DP

9-116356273-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 116356273
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 116356273
    reference: chr 9
allele count: 1
allele frequency: 8.456230550669733e-6
allele num: 118256
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000417994
  ensembl transcript: ENST00000467805
  gene symbol: RGS3
  hgvsc: ENST00000467805.2:c.579-437G>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000420356
  ensembl transcript: ENST00000462143
  gene symbol: RGS3
  hgvsc: ENST00000462143.1:c.1044-437G>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363249
  ensembl transcript: ENST00000374134
  gene symbol: RGS3
  hgvsc: ENST00000374134.3:c.1044-437G>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000478599
  gene symbol: RGS3
  hgvsc: ENST00000478599.1:n.2925-437G>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000343359
  ensembl transcript: ENST00000342620
  gene symbol: RGS3
  hgvsc: ENST00000342620.5:c.-10-437G>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000259406
  ensembl transcript: ENST00000350696
  gene symbol: RGS3
  hgvsc: ENST00000350696.5:c.3081-437G>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000340284
  ensembl transcript: ENST00000343817
  gene symbol: RGS3
  hgvsc: ENST00000343817.5:c.2238-437G>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000487344
  gene symbol: RGS3
  hgvsc: ENST00000487344.1:n.2858-437G>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000378141
  ensembl transcript: ENST00000394646
  gene symbol: RGS3
  hgvsc: ENST00000394646.3:c.1260-437G>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000436168
  ensembl transcript: ENST00000462403
  gene symbol: RGS3
  hgvsc: ENST00000462403.1:c.74G>T
  hgvsp: ENSP00000436168.1:p.Cys25Phe
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000496275
  gene symbol: RGS3
  hgvsc: ENST00000496275.1:n.289-437G>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363255
  ensembl transcript: ENST00000374140
  gene symbol: RGS3
  hgvsc: ENST00000374140.2:c.3081-437G>T
  variant of: http://identifiers.org/hgnc/9999
canonical: false
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1651
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1746
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2233
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3354
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4352
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5314
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2565
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1213
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4340
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2455
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4874
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1961
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5145
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 512
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5634
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3322
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4054
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Cys25Phe
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum

9-116356277-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 116356277
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 116356277
    reference: chr 9
allele count: 1
allele frequency: 8.451370812345762e-6
allele num: 118324
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000487344
  gene symbol: RGS3
  hgvsc: ENST00000487344.1:n.2858-433A>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000378141
  ensembl transcript: ENST00000394646
  gene symbol: RGS3
  hgvsc: ENST00000394646.3:c.1260-433A>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000340284
  ensembl transcript: ENST00000343817
  gene symbol: RGS3
  hgvsc: ENST00000343817.5:c.2238-433A>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000436168
  ensembl transcript: ENST00000462403
  gene symbol: RGS3
  hgvsc: ENST00000462403.1:c.78A>G
  hgvsp: ENST00000462403.1:c.78A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000259406
  ensembl transcript: ENST00000350696
  gene symbol: RGS3
  hgvsc: ENST00000350696.5:c.3081-433A>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000420356
  ensembl transcript: ENST00000462143
  gene symbol: RGS3
  hgvsc: ENST00000462143.1:c.1044-433A>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000478599
  gene symbol: RGS3
  hgvsc: ENST00000478599.1:n.2925-433A>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000343359
  ensembl transcript: ENST00000342620
  gene symbol: RGS3
  hgvsc: ENST00000342620.5:c.-10-433A>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363255
  ensembl transcript: ENST00000374140
  gene symbol: RGS3
  hgvsc: ENST00000374140.2:c.3081-433A>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000417994
  ensembl transcript: ENST00000467805
  gene symbol: RGS3
  hgvsc: ENST00000467805.2:c.579-433A>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363249
  ensembl transcript: ENST00000374134
  gene symbol: RGS3
  hgvsc: ENST00000374134.3:c.1044-433A>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000496275
  gene symbol: RGS3
  hgvsc: ENST00000496275.1:n.289-433A>G
  variant of: http://identifiers.org/hgnc/9999
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4352
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5314
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1651
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5634
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5165
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4874
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2455
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1200
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4055
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2578
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2234
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1746
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3355
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1962
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3321
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5503
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg26Arg
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
reference allele: A
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ClippingRankSum

9-116356278-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 116356278
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 116356278
    reference: chr 9
allele count: 8
allele frequency: 6.760182524928173e-5
allele num: 118340
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000378141
  ensembl transcript: ENST00000394646
  gene symbol: RGS3
  hgvsc: ENST00000394646.3:c.1260-432C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000343359
  ensembl transcript: ENST00000342620
  gene symbol: RGS3
  hgvsc: ENST00000342620.5:c.-10-432C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363255
  ensembl transcript: ENST00000374140
  gene symbol: RGS3
  hgvsc: ENST00000374140.2:c.3081-432C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000496275
  gene symbol: RGS3
  hgvsc: ENST00000496275.1:n.289-432C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000340284
  ensembl transcript: ENST00000343817
  gene symbol: RGS3
  hgvsc: ENST00000343817.5:c.2238-432C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000436168
  ensembl transcript: ENST00000462403
  gene symbol: RGS3
  hgvsc: ENST00000462403.1:c.79C>T
  hgvsp: ENSP00000436168.1:p.His27Tyr
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000259406
  ensembl transcript: ENST00000350696
  gene symbol: RGS3
  hgvsc: ENST00000350696.5:c.3081-432C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000420356
  ensembl transcript: ENST00000462143
  gene symbol: RGS3
  hgvsc: ENST00000462143.1:c.1044-432C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000478599
  gene symbol: RGS3
  hgvsc: ENST00000478599.1:n.2925-432C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363249
  ensembl transcript: ENST00000374134
  gene symbol: RGS3
  hgvsc: ENST00000374134.3:c.1044-432C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000487344
  gene symbol: RGS3
  hgvsc: ENST00000487344.1:n.2858-432C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000417994
  ensembl transcript: ENST00000467805
  gene symbol: RGS3
  hgvsc: ENST00000467805.2:c.579-432C>T
  variant of: http://identifiers.org/hgnc/9999
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3321
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1963
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2577
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4350
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1745
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5313
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5161
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4339
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3354
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1651
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1190
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2233
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5631
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2455
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4874
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4068
  bin: 9.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
hgvs: p.His27Tyr
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS

http://identifiers.org/exac.variant/9-116356278-CA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 116356278
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 116356277
    reference: chr 9
allele count: 6
allele frequency: 5.07013689369613e-5
allele num: 118340
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363249
  ensembl transcript: ENST00000374134
  gene symbol: RGS3
  hgvsc: ENST00000374134.3:c.1044-431delA
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000378141
  ensembl transcript: ENST00000394646
  gene symbol: RGS3
  hgvsc: ENST00000394646.3:c.1260-431delA
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000487344
  gene symbol: RGS3
  hgvsc: ENST00000487344.1:n.2858-431delA
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363255
  ensembl transcript: ENST00000374140
  gene symbol: RGS3
  hgvsc: ENST00000374140.2:c.3081-431delA
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000420356
  ensembl transcript: ENST00000462143
  gene symbol: RGS3
  hgvsc: ENST00000462143.1:c.1044-431delA
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000417994
  ensembl transcript: ENST00000467805
  gene symbol: RGS3
  hgvsc: ENST00000467805.2:c.579-431delA
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000436168
  ensembl transcript: ENST00000462403
  gene symbol: RGS3
  hgvsc: ENST00000462403.1:c.80delA
  hgvsp: ENSP00000436168.1:p.His27ProfsTer112
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000259406
  ensembl transcript: ENST00000350696
  gene symbol: RGS3
  hgvsc: ENST00000350696.5:c.3081-431delA
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000340284
  ensembl transcript: ENST00000343817
  gene symbol: RGS3
  hgvsc: ENST00000343817.5:c.2238-431delA
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000343359
  ensembl transcript: ENST00000342620
  gene symbol: RGS3
  hgvsc: ENST00000342620.5:c.-10-431delA
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000496275
  gene symbol: RGS3
  hgvsc: ENST00000496275.1:n.289-431delA
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000478599
  gene symbol: RGS3
  hgvsc: ENST00000478599.1:n.2925-431delA
  variant of: http://identifiers.org/hgnc/9999
canonical: false
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4874
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1963
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1190
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5313
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3321
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3354
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5502
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 520
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4339
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1651
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2233
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5161
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4350
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4068
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 5631
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2577
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2455
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.His27ProfsTer112
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: CA
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP

9-116356281-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 116356281
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 116356281
    reference: chr 9
allele count: 1
allele frequency: 8.448800270361608e-6
allele num: 118360
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000420356
  ensembl transcript: ENST00000462143
  gene symbol: RGS3
  hgvsc: ENST00000462143.1:c.1044-429A>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000436168
  ensembl transcript: ENST00000462403
  gene symbol: RGS3
  hgvsc: ENST00000462403.1:c.82A>G
  hgvsp: ENSP00000436168.1:p.Met28Val
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363255
  ensembl transcript: ENST00000374140
  gene symbol: RGS3
  hgvsc: ENST00000374140.2:c.3081-429A>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000340284
  ensembl transcript: ENST00000343817
  gene symbol: RGS3
  hgvsc: ENST00000343817.5:c.2238-429A>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000487344
  gene symbol: RGS3
  hgvsc: ENST00000487344.1:n.2858-429A>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000417994
  ensembl transcript: ENST00000467805
  gene symbol: RGS3
  hgvsc: ENST00000467805.2:c.579-429A>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000343359
  ensembl transcript: ENST00000342620
  gene symbol: RGS3
  hgvsc: ENST00000342620.5:c.-10-429A>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000478599
  gene symbol: RGS3
  hgvsc: ENST00000478599.1:n.2925-429A>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000259406
  ensembl transcript: ENST00000350696
  gene symbol: RGS3
  hgvsc: ENST00000350696.5:c.3081-429A>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000378141
  ensembl transcript: ENST00000394646
  gene symbol: RGS3
  hgvsc: ENST00000394646.3:c.1260-429A>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000496275
  gene symbol: RGS3
  hgvsc: ENST00000496275.1:n.289-429A>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363249
  ensembl transcript: ENST00000374134
  gene symbol: RGS3
  hgvsc: ENST00000374134.3:c.1044-429A>G
  variant of: http://identifiers.org/hgnc/9999
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1651
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3321
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5165
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1745
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1959
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3354
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2576
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5502
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4874
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4069
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2233
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1184
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4339
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5631
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4350
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5313
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Met28Val
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: VQSLOD

9-116356281-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 116356281
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 116356281
    reference: chr 9
allele count: 1
allele frequency: 8.448800270361608e-6
allele num: 118360
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000478599
  gene symbol: RGS3
  hgvsc: ENST00000478599.1:n.2925-429A>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000259406
  ensembl transcript: ENST00000350696
  gene symbol: RGS3
  hgvsc: ENST00000350696.5:c.3081-429A>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000340284
  ensembl transcript: ENST00000343817
  gene symbol: RGS3
  hgvsc: ENST00000343817.5:c.2238-429A>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000417994
  ensembl transcript: ENST00000467805
  gene symbol: RGS3
  hgvsc: ENST00000467805.2:c.579-429A>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000487344
  gene symbol: RGS3
  hgvsc: ENST00000487344.1:n.2858-429A>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000496275
  gene symbol: RGS3
  hgvsc: ENST00000496275.1:n.289-429A>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000378141
  ensembl transcript: ENST00000394646
  gene symbol: RGS3
  hgvsc: ENST00000394646.3:c.1260-429A>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000436168
  ensembl transcript: ENST00000462403
  gene symbol: RGS3
  hgvsc: ENST00000462403.1:c.82A>T
  hgvsp: ENSP00000436168.1:p.Met28Leu
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363249
  ensembl transcript: ENST00000374134
  gene symbol: RGS3
  hgvsc: ENST00000374134.3:c.1044-429A>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000343359
  ensembl transcript: ENST00000342620
  gene symbol: RGS3
  hgvsc: ENST00000342620.5:c.-10-429A>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363255
  ensembl transcript: ENST00000374140
  gene symbol: RGS3
  hgvsc: ENST00000374140.2:c.3081-429A>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000420356
  ensembl transcript: ENST00000462143
  gene symbol: RGS3
  hgvsc: ENST00000462143.1:c.1044-429A>T
  variant of: http://identifiers.org/hgnc/9999
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2233
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1745
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5313
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3321
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2576
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5502
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1651
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3354
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4350
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2455
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1959
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1184
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4339
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5631
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5165
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4069
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Met28Leu
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: A
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum

9-116356283-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 116356283
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 116356283
    reference: chr 9
allele count: 2
allele frequency: 1.689588754097253e-5
allele num: 118372
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000487344
  gene symbol: RGS3
  hgvsc: ENST00000487344.1:n.2858-427G>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000343359
  ensembl transcript: ENST00000342620
  gene symbol: RGS3
  hgvsc: ENST00000342620.5:c.-10-427G>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000340284
  ensembl transcript: ENST00000343817
  gene symbol: RGS3
  hgvsc: ENST00000343817.5:c.2238-427G>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000478599
  gene symbol: RGS3
  hgvsc: ENST00000478599.1:n.2925-427G>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363249
  ensembl transcript: ENST00000374134
  gene symbol: RGS3
  hgvsc: ENST00000374134.3:c.1044-427G>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000378141
  ensembl transcript: ENST00000394646
  gene symbol: RGS3
  hgvsc: ENST00000394646.3:c.1260-427G>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000420356
  ensembl transcript: ENST00000462143
  gene symbol: RGS3
  hgvsc: ENST00000462143.1:c.1044-427G>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000259406
  ensembl transcript: ENST00000350696
  gene symbol: RGS3
  hgvsc: ENST00000350696.5:c.3081-427G>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000436168
  ensembl transcript: ENST00000462403
  gene symbol: RGS3
  hgvsc: ENST00000462403.1:c.84G>T
  hgvsp: ENSP00000436168.1:p.Met28Ile
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000496275
  gene symbol: RGS3
  hgvsc: ENST00000496275.1:n.289-427G>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363255
  ensembl transcript: ENST00000374140
  gene symbol: RGS3
  hgvsc: ENST00000374140.2:c.3081-427G>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000417994
  ensembl transcript: ENST00000467805
  gene symbol: RGS3
  hgvsc: ENST00000467805.2:c.579-427G>T
  variant of: http://identifiers.org/hgnc/9999
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4071
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5631
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5502
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2575
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1190
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3321
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1745
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4874
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5313
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1964
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2234
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 138
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1650
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2455
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 304
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4337
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5160
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3354
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Met28Ile
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: African
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD

9-116356288-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 116356288
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 116356288
    reference: chr 9
allele count: 1
allele frequency: 8.44694474008751e-6
allele num: 118386
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363255
  ensembl transcript: ENST00000374140
  gene symbol: RGS3
  hgvsc: ENST00000374140.2:c.3081-422T>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000436168
  ensembl transcript: ENST00000462403
  gene symbol: RGS3
  hgvsc: ENST00000462403.1:c.89T>C
  hgvsp: ENSP00000436168.1:p.Leu30Pro
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000378141
  ensembl transcript: ENST00000394646
  gene symbol: RGS3
  hgvsc: ENST00000394646.3:c.1260-422T>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000340284
  ensembl transcript: ENST00000343817
  gene symbol: RGS3
  hgvsc: ENST00000343817.5:c.2238-422T>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000487344
  gene symbol: RGS3
  hgvsc: ENST00000487344.1:n.2858-422T>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000496275
  gene symbol: RGS3
  hgvsc: ENST00000496275.1:n.289-422T>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000417994
  ensembl transcript: ENST00000467805
  gene symbol: RGS3
  hgvsc: ENST00000467805.2:c.579-422T>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000420356
  ensembl transcript: ENST00000462143
  gene symbol: RGS3
  hgvsc: ENST00000462143.1:c.1044-422T>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000478599
  gene symbol: RGS3
  hgvsc: ENST00000478599.1:n.2925-422T>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000259406
  ensembl transcript: ENST00000350696
  gene symbol: RGS3
  hgvsc: ENST00000350696.5:c.3081-422T>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363249
  ensembl transcript: ENST00000374134
  gene symbol: RGS3
  hgvsc: ENST00000374134.3:c.1044-422T>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000343359
  ensembl transcript: ENST00000342620
  gene symbol: RGS3
  hgvsc: ENST00000342620.5:c.-10-422T>C
  variant of: http://identifiers.org/hgnc/9999
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4874
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4350
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4337
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1653
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5631
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2234
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5502
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1745
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5144
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2591
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5313
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1189
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3354
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1961
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2455
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3320
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu30Pro
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: South Asian
reference allele: T
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD

9-116356293-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 116356293
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 116356293
    reference: chr 9
allele count: 479
allele frequency: 4.044856530036649e-3
allele num: 118422
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000436168
  ensembl transcript: ENST00000462403
  gene symbol: RGS3
  hgvsc: ENST00000462403.1:c.94C>T
  hgvsp: ENSP00000436168.1:p.Arg32Trp
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000343359
  ensembl transcript: ENST00000342620
  gene symbol: RGS3
  hgvsc: ENST00000342620.5:c.-10-417C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363255
  ensembl transcript: ENST00000374140
  gene symbol: RGS3
  hgvsc: ENST00000374140.2:c.3081-417C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000340284
  ensembl transcript: ENST00000343817
  gene symbol: RGS3
  hgvsc: ENST00000343817.5:c.2238-417C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000420356
  ensembl transcript: ENST00000462143
  gene symbol: RGS3
  hgvsc: ENST00000462143.1:c.1044-417C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000487344
  gene symbol: RGS3
  hgvsc: ENST00000487344.1:n.2858-417C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000478599
  gene symbol: RGS3
  hgvsc: ENST00000478599.1:n.2925-417C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000417994
  ensembl transcript: ENST00000467805
  gene symbol: RGS3
  hgvsc: ENST00000467805.2:c.579-417C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363249
  ensembl transcript: ENST00000374134
  gene symbol: RGS3
  hgvsc: ENST00000374134.3:c.1044-417C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000259406
  ensembl transcript: ENST00000350696
  gene symbol: RGS3
  hgvsc: ENST00000350696.5:c.3081-417C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000496275
  gene symbol: RGS3
  hgvsc: ENST00000496275.1:n.289-417C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000378141
  ensembl transcript: ENST00000394646
  gene symbol: RGS3
  hgvsc: ENST00000394646.3:c.1260-417C>T
  variant of: http://identifiers.org/hgnc/9999
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5467
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2572
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 5106
  bin: 2.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 3294
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1640
  bin: 3.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 1951
  bin: 3.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1736
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 1.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 5272
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 4843
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2216
  bin: 4.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 2443
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3330
  bin: 4.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1172
  bin: 7.5e0
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 4432
  bin: 9.75e1
  variant carriers: 386
genotype depth: GenotypeDepth
  all individuals: 5594
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4302
  bin: 5.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 1.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
hgvs: p.Arg32Trp
num of homozygotes: 14
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: European (Finnish)
population: African
reference allele: C
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD

9-116356295-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 116356295
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 116356295
    reference: chr 9
allele count: 5
allele frequency: 4.221261650682156e-5
allele num: 118448
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000496275
  gene symbol: RGS3
  hgvsc: ENST00000496275.1:n.289-415G>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363249
  ensembl transcript: ENST00000374134
  gene symbol: RGS3
  hgvsc: ENST00000374134.3:c.1044-415G>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000259406
  ensembl transcript: ENST00000350696
  gene symbol: RGS3
  hgvsc: ENST00000350696.5:c.3081-415G>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000420356
  ensembl transcript: ENST00000462143
  gene symbol: RGS3
  hgvsc: ENST00000462143.1:c.1044-415G>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000436168
  ensembl transcript: ENST00000462403
  gene symbol: RGS3
  hgvsc: ENST00000462403.1:c.96G>C
  hgvsp: ENST00000462403.1:c.96G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363255
  ensembl transcript: ENST00000374140
  gene symbol: RGS3
  hgvsc: ENST00000374140.2:c.3081-415G>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000417994
  ensembl transcript: ENST00000467805
  gene symbol: RGS3
  hgvsc: ENST00000467805.2:c.579-415G>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000378141
  ensembl transcript: ENST00000394646
  gene symbol: RGS3
  hgvsc: ENST00000394646.3:c.1260-415G>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000487344
  gene symbol: RGS3
  hgvsc: ENST00000487344.1:n.2858-415G>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000343359
  ensembl transcript: ENST00000342620
  gene symbol: RGS3
  hgvsc: ENST00000342620.5:c.-10-415G>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000478599
  gene symbol: RGS3
  hgvsc: ENST00000478599.1:n.2925-415G>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000340284
  ensembl transcript: ENST00000343817
  gene symbol: RGS3
  hgvsc: ENST00000343817.5:c.2238-415G>C
  variant of: http://identifiers.org/hgnc/9999
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1637
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4299
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3307
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3331
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5101
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5471
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5272
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2216
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5593
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4336
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4847
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1175
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1960
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4377
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2447
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1746
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg32Arg
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

9-116356296-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 116356296
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 116356296
    reference: chr 9
allele count: 4
allele frequency: 3.37689528247729e-5
allele num: 118452
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000340284
  ensembl transcript: ENST00000343817
  gene symbol: RGS3
  hgvsc: ENST00000343817.5:c.2238-414C>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363255
  ensembl transcript: ENST00000374140
  gene symbol: RGS3
  hgvsc: ENST00000374140.2:c.3081-414C>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000343359
  ensembl transcript: ENST00000342620
  gene symbol: RGS3
  hgvsc: ENST00000342620.5:c.-10-414C>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000487344
  gene symbol: RGS3
  hgvsc: ENST00000487344.1:n.2858-414C>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000417994
  ensembl transcript: ENST00000467805
  gene symbol: RGS3
  hgvsc: ENST00000467805.2:c.579-414C>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000436168
  ensembl transcript: ENST00000462403
  gene symbol: RGS3
  hgvsc: ENST00000462403.1:c.97C>G
  hgvsp: ENSP00000436168.1:p.Leu33Val
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000378141
  ensembl transcript: ENST00000394646
  gene symbol: RGS3
  hgvsc: ENST00000394646.3:c.1260-414C>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000478599
  gene symbol: RGS3
  hgvsc: ENST00000478599.1:n.2925-414C>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000259406
  ensembl transcript: ENST00000350696
  gene symbol: RGS3
  hgvsc: ENST00000350696.5:c.3081-414C>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363249
  ensembl transcript: ENST00000374134
  gene symbol: RGS3
  hgvsc: ENST00000374134.3:c.1044-414C>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000496275
  gene symbol: RGS3
  hgvsc: ENST00000496275.1:n.289-414C>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000420356
  ensembl transcript: ENST00000462143
  gene symbol: RGS3
  hgvsc: ENST00000462143.1:c.1044-414C>G
  variant of: http://identifiers.org/hgnc/9999
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4847
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1959
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5272
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4298
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1637
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3330
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2597
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5592
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1174
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5094
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2447
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2215
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4381
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1746
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5471
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3307
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu33Val
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: Latino
population: European (Finnish)
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum

9-116356309-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 116356309
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 116356309
    reference: chr 9
allele count: 1
allele frequency: 8.42800795603951e-6
allele num: 118652
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000436168
  ensembl transcript: ENST00000462403
  gene symbol: RGS3
  hgvsc: ENST00000462403.1:c.110T>C
  hgvsp: ENSP00000436168.1:p.Val37Ala
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000340284
  ensembl transcript: ENST00000343817
  gene symbol: RGS3
  hgvsc: ENST00000343817.5:c.2238-401T>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000259406
  ensembl transcript: ENST00000350696
  gene symbol: RGS3
  hgvsc: ENST00000350696.5:c.3081-401T>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000478599
  gene symbol: RGS3
  hgvsc: ENST00000478599.1:n.2925-401T>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000420356
  ensembl transcript: ENST00000462143
  gene symbol: RGS3
  hgvsc: ENST00000462143.1:c.1044-401T>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000487344
  gene symbol: RGS3
  hgvsc: ENST00000487344.1:n.2858-401T>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000378141
  ensembl transcript: ENST00000394646
  gene symbol: RGS3
  hgvsc: ENST00000394646.3:c.1260-401T>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363255
  ensembl transcript: ENST00000374140
  gene symbol: RGS3
  hgvsc: ENST00000374140.2:c.3081-401T>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000343359
  ensembl transcript: ENST00000342620
  gene symbol: RGS3
  hgvsc: ENST00000342620.5:c.-10-401T>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000496275
  gene symbol: RGS3
  hgvsc: ENST00000496275.1:n.289-401T>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000417994
  ensembl transcript: ENST00000467805
  gene symbol: RGS3
  hgvsc: ENST00000467805.2:c.579-401T>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363249
  ensembl transcript: ENST00000374134
  gene symbol: RGS3
  hgvsc: ENST00000374134.3:c.1044-401T>C
  variant of: http://identifiers.org/hgnc/9999
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4298
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 588
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3307
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1965
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4847
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2447
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4382
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1746
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2213
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1106
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1640
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3330
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2625
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5125
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5272
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5470
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4336
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val37Ala
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ

9-116356320-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 116356320
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 116356320
    reference: chr 9
allele count: 1
allele frequency: 8.41226845231085e-6
allele num: 118874
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000436168
  ensembl transcript: ENST00000462403
  gene symbol: RGS3
  hgvsc: ENST00000462403.1:c.121G>A
  hgvsp: ENSP00000436168.1:p.Glu41Lys
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000378141
  ensembl transcript: ENST00000394646
  gene symbol: RGS3
  hgvsc: ENST00000394646.3:c.1260-390G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363255
  ensembl transcript: ENST00000374140
  gene symbol: RGS3
  hgvsc: ENST00000374140.2:c.3081-390G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000259406
  ensembl transcript: ENST00000350696
  gene symbol: RGS3
  hgvsc: ENST00000350696.5:c.3081-390G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000340284
  ensembl transcript: ENST00000343817
  gene symbol: RGS3
  hgvsc: ENST00000343817.5:c.2238-390G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000478599
  gene symbol: RGS3
  hgvsc: ENST00000478599.1:n.2925-390G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000496275
  gene symbol: RGS3
  hgvsc: ENST00000496275.1:n.289-390G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363249
  ensembl transcript: ENST00000374134
  gene symbol: RGS3
  hgvsc: ENST00000374134.3:c.1044-390G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000487344
  gene symbol: RGS3
  hgvsc: ENST00000487344.1:n.2858-390G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000420356
  ensembl transcript: ENST00000462143
  gene symbol: RGS3
  hgvsc: ENST00000462143.1:c.1044-390G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000417994
  ensembl transcript: ENST00000467805
  gene symbol: RGS3
  hgvsc: ENST00000467805.2:c.579-390G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000343359
  ensembl transcript: ENST00000342620
  gene symbol: RGS3
  hgvsc: ENST00000342620.5:c.-10-390G>A
  variant of: http://identifiers.org/hgnc/9999
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5272
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2447
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1971
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1642
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2214
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2631
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5218
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3307
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4382
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5592
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3331
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4297
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1075
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 584
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1746
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4847
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5470
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu41Lys
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
population: South Asian
population: Latino
reference allele: G
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum

9-116356322-A-AT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 116356322
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 116356323
    reference: chr 9
allele count: 9
allele frequency: 7.590837016294997e-5
allele num: 118564
alternate allele: AT
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363249
  ensembl transcript: ENST00000374134
  gene symbol: RGS3
  hgvsc: ENST00000374134.3:c.1044-379dupT
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000259406
  ensembl transcript: ENST00000350696
  gene symbol: RGS3
  hgvsc: ENST00000350696.5:c.3081-379dupT
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000436168
  ensembl transcript: ENST00000462403
  gene symbol: RGS3
  hgvsc: ENST00000462403.1:c.132dupT
  hgvsp: ENSP00000436168.1:p.Pro45SerfsTer16
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000487344
  gene symbol: RGS3
  hgvsc: ENST00000487344.1:n.2858-379dupT
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363255
  ensembl transcript: ENST00000374140
  gene symbol: RGS3
  hgvsc: ENST00000374140.2:c.3081-379dupT
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000340284
  ensembl transcript: ENST00000343817
  gene symbol: RGS3
  hgvsc: ENST00000343817.5:c.2238-379dupT
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000378141
  ensembl transcript: ENST00000394646
  gene symbol: RGS3
  hgvsc: ENST00000394646.3:c.1260-379dupT
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000417994
  ensembl transcript: ENST00000467805
  gene symbol: RGS3
  hgvsc: ENST00000467805.2:c.579-379dupT
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000496275
  gene symbol: RGS3
  hgvsc: ENST00000496275.1:n.289-379dupT
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000478599
  gene symbol: RGS3
  hgvsc: ENST00000478599.1:n.2925-379dupT
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000343359
  ensembl transcript: ENST00000342620
  gene symbol: RGS3
  hgvsc: ENST00000342620.5:c.-10-379dupT
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000420356
  ensembl transcript: ENST00000462143
  gene symbol: RGS3
  hgvsc: ENST00000462143.1:c.1044-379dupT
  variant of: http://identifiers.org/hgnc/9999
canonical: false
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1986
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 952
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5276
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5124
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3340
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4848
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1675
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1748
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4340
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3309
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2598
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5594
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5475
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2248
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2449
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4398
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
hgvs: p.Pro45SerfsTer16
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
population: African
reference allele: A
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP

9-116356322-AT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 116356322
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 116356321
    reference: chr 9
allele count: 6
allele frequency: 5.060558010863331e-5
allele num: 118564
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000378141
  ensembl transcript: ENST00000394646
  gene symbol: RGS3
  hgvsc: ENST00000394646.3:c.1260-379delT
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000343359
  ensembl transcript: ENST00000342620
  gene symbol: RGS3
  hgvsc: ENST00000342620.5:c.-10-379delT
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000417994
  ensembl transcript: ENST00000467805
  gene symbol: RGS3
  hgvsc: ENST00000467805.2:c.579-379delT
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000496275
  gene symbol: RGS3
  hgvsc: ENST00000496275.1:n.289-379delT
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000420356
  ensembl transcript: ENST00000462143
  gene symbol: RGS3
  hgvsc: ENST00000462143.1:c.1044-379delT
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000340284
  ensembl transcript: ENST00000343817
  gene symbol: RGS3
  hgvsc: ENST00000343817.5:c.2238-379delT
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363255
  ensembl transcript: ENST00000374140
  gene symbol: RGS3
  hgvsc: ENST00000374140.2:c.3081-379delT
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363249
  ensembl transcript: ENST00000374134
  gene symbol: RGS3
  hgvsc: ENST00000374134.3:c.1044-379delT
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000436168
  ensembl transcript: ENST00000462403
  gene symbol: RGS3
  hgvsc: ENST00000462403.1:c.132delT
  hgvsp: ENSP00000436168.1:p.Pro45ArgfsTer94
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000259406
  ensembl transcript: ENST00000350696
  gene symbol: RGS3
  hgvsc: ENST00000350696.5:c.3081-379delT
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000487344
  gene symbol: RGS3
  hgvsc: ENST00000487344.1:n.2858-379delT
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000478599
  gene symbol: RGS3
  hgvsc: ENST00000478599.1:n.2925-379delT
  variant of: http://identifiers.org/hgnc/9999
canonical: false
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5475
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5594
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3309
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 952
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3340
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4398
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2248
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4304
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2598
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2449
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1986
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4340
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5276
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1748
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4848
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1675
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro45ArgfsTer94
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
reference allele: AT
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum

9-116356324-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 116356324
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 116356324
    reference: chr 9
allele count: 1
allele frequency: 8.414816809438059e-6
allele num: 118838
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000436168
  ensembl transcript: ENST00000462403
  gene symbol: RGS3
  hgvsc: ENST00000462403.1:c.125T>A
  hgvsp: ENSP00000436168.1:p.Phe42Tyr
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363249
  ensembl transcript: ENST00000374134
  gene symbol: RGS3
  hgvsc: ENST00000374134.3:c.1044-386T>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000259406
  ensembl transcript: ENST00000350696
  gene symbol: RGS3
  hgvsc: ENST00000350696.5:c.3081-386T>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000420356
  ensembl transcript: ENST00000462143
  gene symbol: RGS3
  hgvsc: ENST00000462143.1:c.1044-386T>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363255
  ensembl transcript: ENST00000374140
  gene symbol: RGS3
  hgvsc: ENST00000374140.2:c.3081-386T>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000478599
  gene symbol: RGS3
  hgvsc: ENST00000478599.1:n.2925-386T>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000340284
  ensembl transcript: ENST00000343817
  gene symbol: RGS3
  hgvsc: ENST00000343817.5:c.2238-386T>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000378141
  ensembl transcript: ENST00000394646
  gene symbol: RGS3
  hgvsc: ENST00000394646.3:c.1260-386T>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000487344
  gene symbol: RGS3
  hgvsc: ENST00000487344.1:n.2858-386T>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000417994
  ensembl transcript: ENST00000467805
  gene symbol: RGS3
  hgvsc: ENST00000467805.2:c.579-386T>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000343359
  ensembl transcript: ENST00000342620
  gene symbol: RGS3
  hgvsc: ENST00000342620.5:c.-10-386T>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000496275
  gene symbol: RGS3
  hgvsc: ENST00000496275.1:n.289-386T>A
  variant of: http://identifiers.org/hgnc/9999
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5596
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5101
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 955
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4339
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2449
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2617
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1750
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 606
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1668
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3338
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4417
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4301
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5475
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4850
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2241
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1974
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3308
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Phe42Tyr
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
population: Latino
reference allele: T
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum

9-116356326-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 116356326
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 116356326
    reference: chr 9
allele count: 3
allele frequency: 2.517834662190516e-5
allele num: 119150
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000436168
  ensembl transcript: ENST00000462403
  gene symbol: RGS3
  hgvsc: ENST00000462403.1:c.127T>C
  hgvsp: ENSP00000436168.1:p.Phe43Leu
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000487344
  gene symbol: RGS3
  hgvsc: ENST00000487344.1:n.2858-384T>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000378141
  ensembl transcript: ENST00000394646
  gene symbol: RGS3
  hgvsc: ENST00000394646.3:c.1260-384T>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000340284
  ensembl transcript: ENST00000343817
  gene symbol: RGS3
  hgvsc: ENST00000343817.5:c.2238-384T>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000343359
  ensembl transcript: ENST00000342620
  gene symbol: RGS3
  hgvsc: ENST00000342620.5:c.-10-384T>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000496275
  gene symbol: RGS3
  hgvsc: ENST00000496275.1:n.289-384T>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363249
  ensembl transcript: ENST00000374134
  gene symbol: RGS3
  hgvsc: ENST00000374134.3:c.1044-384T>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000417994
  ensembl transcript: ENST00000467805
  gene symbol: RGS3
  hgvsc: ENST00000467805.2:c.579-384T>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000478599
  gene symbol: RGS3
  hgvsc: ENST00000478599.1:n.2925-384T>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363255
  ensembl transcript: ENST00000374140
  gene symbol: RGS3
  hgvsc: ENST00000374140.2:c.3081-384T>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000420356
  ensembl transcript: ENST00000462143
  gene symbol: RGS3
  hgvsc: ENST00000462143.1:c.1044-384T>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000259406
  ensembl transcript: ENST00000350696
  gene symbol: RGS3
  hgvsc: ENST00000350696.5:c.3081-384T>C
  variant of: http://identifiers.org/hgnc/9999
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4339
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5274
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2234
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3308
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1955
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5475
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3338
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2609
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4298
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4849
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1662
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5133
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5595
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2449
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4420
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
hgvs: p.Phe43Leu
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum

9-116356326-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 116356326
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 116356326
    reference: chr 9
allele count: 1
allele frequency: 8.39278220730172e-6
allele num: 119150
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000259406
  ensembl transcript: ENST00000350696
  gene symbol: RGS3
  hgvsc: ENST00000350696.5:c.3081-384T>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000487344
  gene symbol: RGS3
  hgvsc: ENST00000487344.1:n.2858-384T>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000417994
  ensembl transcript: ENST00000467805
  gene symbol: RGS3
  hgvsc: ENST00000467805.2:c.579-384T>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363255
  ensembl transcript: ENST00000374140
  gene symbol: RGS3
  hgvsc: ENST00000374140.2:c.3081-384T>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000496275
  gene symbol: RGS3
  hgvsc: ENST00000496275.1:n.289-384T>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000420356
  ensembl transcript: ENST00000462143
  gene symbol: RGS3
  hgvsc: ENST00000462143.1:c.1044-384T>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363249
  ensembl transcript: ENST00000374134
  gene symbol: RGS3
  hgvsc: ENST00000374134.3:c.1044-384T>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000436168
  ensembl transcript: ENST00000462403
  gene symbol: RGS3
  hgvsc: ENST00000462403.1:c.127T>G
  hgvsp: ENSP00000436168.1:p.Phe43Val
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000340284
  ensembl transcript: ENST00000343817
  gene symbol: RGS3
  hgvsc: ENST00000343817.5:c.2238-384T>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000378141
  ensembl transcript: ENST00000394646
  gene symbol: RGS3
  hgvsc: ENST00000394646.3:c.1260-384T>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000343359
  ensembl transcript: ENST00000342620
  gene symbol: RGS3
  hgvsc: ENST00000342620.5:c.-10-384T>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000478599
  gene symbol: RGS3
  hgvsc: ENST00000478599.1:n.2925-384T>G
  variant of: http://identifiers.org/hgnc/9999
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4339
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5475
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3308
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5274
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5595
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1955
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5133
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3338
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4298
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2449
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4849
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1662
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2609
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1750
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4420
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Phe43Val
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: Other
population: South Asian
reference allele: T
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: MQ

9-116356330-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 116356330
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 116356330
    reference: chr 9
allele count: 2
allele frequency: 1.678331067586392e-5
allele num: 119166
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000478599
  gene symbol: RGS3
  hgvsc: ENST00000478599.1:n.2925-380T>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363255
  ensembl transcript: ENST00000374140
  gene symbol: RGS3
  hgvsc: ENST00000374140.2:c.3081-380T>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000436168
  ensembl transcript: ENST00000462403
  gene symbol: RGS3
  hgvsc: ENST00000462403.1:c.131T>C
  hgvsp: ENSP00000436168.1:p.Phe44Ser
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000259406
  ensembl transcript: ENST00000350696
  gene symbol: RGS3
  hgvsc: ENST00000350696.5:c.3081-380T>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000340284
  ensembl transcript: ENST00000343817
  gene symbol: RGS3
  hgvsc: ENST00000343817.5:c.2238-380T>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000417994
  ensembl transcript: ENST00000467805
  gene symbol: RGS3
  hgvsc: ENST00000467805.2:c.579-380T>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000378141
  ensembl transcript: ENST00000394646
  gene symbol: RGS3
  hgvsc: ENST00000394646.3:c.1260-380T>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000420356
  ensembl transcript: ENST00000462143
  gene symbol: RGS3
  hgvsc: ENST00000462143.1:c.1044-380T>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000487344
  gene symbol: RGS3
  hgvsc: ENST00000487344.1:n.2858-380T>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363249
  ensembl transcript: ENST00000374134
  gene symbol: RGS3
  hgvsc: ENST00000374134.3:c.1044-380T>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000496275
  gene symbol: RGS3
  hgvsc: ENST00000496275.1:n.289-380T>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000343359
  ensembl transcript: ENST00000342620
  gene symbol: RGS3
  hgvsc: ENST00000342620.5:c.-10-380T>C
  variant of: http://identifiers.org/hgnc/9999
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1951
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4848
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 957
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3338
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5595
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4339
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5475
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2598
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1660
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3308
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5274
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5152
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1750
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4298
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4422
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2234
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Phe44Ser
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
population: Latino
population: European (Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP

9-116356331-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 116356331
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 116356331
    reference: chr 9
allele count: 5
allele frequency: 4.195968513452275e-5
allele num: 119162
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363249
  ensembl transcript: ENST00000374134
  gene symbol: RGS3
  hgvsc: ENST00000374134.3:c.1044-379T>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000259406
  ensembl transcript: ENST00000350696
  gene symbol: RGS3
  hgvsc: ENST00000350696.5:c.3081-379T>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000478599
  gene symbol: RGS3
  hgvsc: ENST00000478599.1:n.2925-379T>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000420356
  ensembl transcript: ENST00000462143
  gene symbol: RGS3
  hgvsc: ENST00000462143.1:c.1044-379T>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000436168
  ensembl transcript: ENST00000462403
  gene symbol: RGS3
  hgvsc: ENST00000462403.1:c.132T>C
  hgvsp: ENST00000462403.1:c.132T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000487344
  gene symbol: RGS3
  hgvsc: ENST00000487344.1:n.2858-379T>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000417994
  ensembl transcript: ENST00000467805
  gene symbol: RGS3
  hgvsc: ENST00000467805.2:c.579-379T>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000340284
  ensembl transcript: ENST00000343817
  gene symbol: RGS3
  hgvsc: ENST00000343817.5:c.2238-379T>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000378141
  ensembl transcript: ENST00000394646
  gene symbol: RGS3
  hgvsc: ENST00000394646.3:c.1260-379T>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000343359
  ensembl transcript: ENST00000342620
  gene symbol: RGS3
  hgvsc: ENST00000342620.5:c.-10-379T>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363255
  ensembl transcript: ENST00000374140
  gene symbol: RGS3
  hgvsc: ENST00000374140.2:c.3081-379T>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000496275
  gene symbol: RGS3
  hgvsc: ENST00000496275.1:n.289-379T>C
  variant of: http://identifiers.org/hgnc/9999
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4337
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2588
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 943
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4297
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1659
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2234
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2447
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4436
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 5474
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1950
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5157
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3338
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5271
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4847
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3307
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1751
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Phe44Phe
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
population: Latino
population: South Asian
reference allele: T
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD

9-116356331-T-TC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 116356331
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 116356332
    reference: chr 9
allele count: 15
allele frequency: 1.258790554035683e-4
allele num: 119162
alternate allele: TC
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363249
  ensembl transcript: ENST00000374134
  gene symbol: RGS3
  hgvsc: ENST00000374134.3:c.1044-377dupC
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000343359
  ensembl transcript: ENST00000342620
  gene symbol: RGS3
  hgvsc: ENST00000342620.5:c.-10-377dupC
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000478599
  gene symbol: RGS3
  hgvsc: ENST00000478599.1:n.2925-377dupC
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000340284
  ensembl transcript: ENST00000343817
  gene symbol: RGS3
  hgvsc: ENST00000343817.5:c.2238-377dupC
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000378141
  ensembl transcript: ENST00000394646
  gene symbol: RGS3
  hgvsc: ENST00000394646.3:c.1260-377dupC
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000487344
  gene symbol: RGS3
  hgvsc: ENST00000487344.1:n.2858-377dupC
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363255
  ensembl transcript: ENST00000374140
  gene symbol: RGS3
  hgvsc: ENST00000374140.2:c.3081-377dupC
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000436168
  ensembl transcript: ENST00000462403
  gene symbol: RGS3
  hgvsc: ENST00000462403.1:c.134dupC
  hgvsp: ENSP00000436168.1:p.Leu46AlafsTer15
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000420356
  ensembl transcript: ENST00000462143
  gene symbol: RGS3
  hgvsc: ENST00000462143.1:c.1044-377dupC
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000417994
  ensembl transcript: ENST00000467805
  gene symbol: RGS3
  hgvsc: ENST00000467805.2:c.579-377dupC
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000259406
  ensembl transcript: ENST00000350696
  gene symbol: RGS3
  hgvsc: ENST00000350696.5:c.3081-377dupC
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000496275
  gene symbol: RGS3
  hgvsc: ENST00000496275.1:n.289-377dupC
  variant of: http://identifiers.org/hgnc/9999
canonical: false
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5157
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4337
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1950
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5474
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4297
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2234
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 943
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1659
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4847
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5596
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2447
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2588
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5271
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3307
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3338
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1751
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Leu46AlafsTer15
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: T
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP

9-116356333-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 116356333
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 116356333
    reference: chr 9
allele count: 9
allele frequency: 7.551729346020239e-5
allele num: 119178
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000487344
  gene symbol: RGS3
  hgvsc: ENST00000487344.1:n.2858-377C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000259406
  ensembl transcript: ENST00000350696
  gene symbol: RGS3
  hgvsc: ENST00000350696.5:c.3081-377C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000436168
  ensembl transcript: ENST00000462403
  gene symbol: RGS3
  hgvsc: ENST00000462403.1:c.134C>T
  hgvsp: ENSP00000436168.1:p.Pro45Leu
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000478599
  gene symbol: RGS3
  hgvsc: ENST00000478599.1:n.2925-377C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000496275
  gene symbol: RGS3
  hgvsc: ENST00000496275.1:n.289-377C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000343359
  ensembl transcript: ENST00000342620
  gene symbol: RGS3
  hgvsc: ENST00000342620.5:c.-10-377C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363255
  ensembl transcript: ENST00000374140
  gene symbol: RGS3
  hgvsc: ENST00000374140.2:c.3081-377C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000340284
  ensembl transcript: ENST00000343817
  gene symbol: RGS3
  hgvsc: ENST00000343817.5:c.2238-377C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000378141
  ensembl transcript: ENST00000394646
  gene symbol: RGS3
  hgvsc: ENST00000394646.3:c.1260-377C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363249
  ensembl transcript: ENST00000374134
  gene symbol: RGS3
  hgvsc: ENST00000374134.3:c.1044-377C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000417994
  ensembl transcript: ENST00000467805
  gene symbol: RGS3
  hgvsc: ENST00000467805.2:c.579-377C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000420356
  ensembl transcript: ENST00000462143
  gene symbol: RGS3
  hgvsc: ENST00000462143.1:c.1044-377C>T
  variant of: http://identifiers.org/hgnc/9999
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5474
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4337
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5596
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2448
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4847
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2588
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4439
  bin: 9.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 5270
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1661
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4296
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2233
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5144
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3337
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1951
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1751
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro45Leu
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP

9-116356334-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 116356334
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 116356334
    reference: chr 9
allele count: 3
allele frequency: 2.516060855125216e-5
allele num: 119234
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000436168
  ensembl transcript: ENST00000462403
  gene symbol: RGS3
  hgvsc: ENST00000462403.1:c.135G>A
  hgvsp: ENST00000462403.1:c.135G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000478599
  gene symbol: RGS3
  hgvsc: ENST00000478599.1:n.2925-376G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000487344
  gene symbol: RGS3
  hgvsc: ENST00000487344.1:n.2858-376G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000420356
  ensembl transcript: ENST00000462143
  gene symbol: RGS3
  hgvsc: ENST00000462143.1:c.1044-376G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363255
  ensembl transcript: ENST00000374140
  gene symbol: RGS3
  hgvsc: ENST00000374140.2:c.3081-376G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000417994
  ensembl transcript: ENST00000467805
  gene symbol: RGS3
  hgvsc: ENST00000467805.2:c.579-376G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000259406
  ensembl transcript: ENST00000350696
  gene symbol: RGS3
  hgvsc: ENST00000350696.5:c.3081-376G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000378141
  ensembl transcript: ENST00000394646
  gene symbol: RGS3
  hgvsc: ENST00000394646.3:c.1260-376G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000340284
  ensembl transcript: ENST00000343817
  gene symbol: RGS3
  hgvsc: ENST00000343817.5:c.2238-376G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363249
  ensembl transcript: ENST00000374134
  gene symbol: RGS3
  hgvsc: ENST00000374134.3:c.1044-376G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000496275
  gene symbol: RGS3
  hgvsc: ENST00000496275.1:n.289-376G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000343359
  ensembl transcript: ENST00000342620
  gene symbol: RGS3
  hgvsc: ENST00000342620.5:c.-10-376G>A
  variant of: http://identifiers.org/hgnc/9999
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1952
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4295
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 910
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3307
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2233
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4337
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5144
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5269
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2607
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2448
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5474
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1661
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4440
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3338
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5596
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1751
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro45Pro
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: Other
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ

9-116356339-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 116356339
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 116356339
    reference: chr 9
allele count: 1
allele frequency: 8.382651264942076e-6
allele num: 119294
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000378141
  ensembl transcript: ENST00000394646
  gene symbol: RGS3
  hgvsc: ENST00000394646.3:c.1260-371C>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363249
  ensembl transcript: ENST00000374134
  gene symbol: RGS3
  hgvsc: ENST00000374134.3:c.1044-371C>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000343359
  ensembl transcript: ENST00000342620
  gene symbol: RGS3
  hgvsc: ENST00000342620.5:c.-10-371C>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000436168
  ensembl transcript: ENST00000462403
  gene symbol: RGS3
  hgvsc: ENST00000462403.1:c.140C>G
  hgvsp: ENSP00000436168.1:p.Pro47Arg
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000259406
  ensembl transcript: ENST00000350696
  gene symbol: RGS3
  hgvsc: ENST00000350696.5:c.3081-371C>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363255
  ensembl transcript: ENST00000374140
  gene symbol: RGS3
  hgvsc: ENST00000374140.2:c.3081-371C>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000417994
  ensembl transcript: ENST00000467805
  gene symbol: RGS3
  hgvsc: ENST00000467805.2:c.579-371C>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000496275
  gene symbol: RGS3
  hgvsc: ENST00000496275.1:n.289-371C>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000478599
  gene symbol: RGS3
  hgvsc: ENST00000478599.1:n.2925-371C>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000340284
  ensembl transcript: ENST00000343817
  gene symbol: RGS3
  hgvsc: ENST00000343817.5:c.2238-371C>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000420356
  ensembl transcript: ENST00000462143
  gene symbol: RGS3
  hgvsc: ENST00000462143.1:c.1044-371C>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000487344
  gene symbol: RGS3
  hgvsc: ENST00000487344.1:n.2858-371C>G
  variant of: http://identifiers.org/hgnc/9999
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5187
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5474
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 896
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3307
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2593
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4337
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5596
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4847
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2233
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1657
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3338
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4295
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2448
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4441
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1957
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1750
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro47Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP

9-116356340-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 116356340
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 116356340
    reference: chr 9
allele count: 1
allele frequency: 8.381948635418762e-6
allele num: 119304
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000340284
  ensembl transcript: ENST00000343817
  gene symbol: RGS3
  hgvsc: ENST00000343817.5:c.2238-370C>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363255
  ensembl transcript: ENST00000374140
  gene symbol: RGS3
  hgvsc: ENST00000374140.2:c.3081-370C>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000259406
  ensembl transcript: ENST00000350696
  gene symbol: RGS3
  hgvsc: ENST00000350696.5:c.3081-370C>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000478599
  gene symbol: RGS3
  hgvsc: ENST00000478599.1:n.2925-370C>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000378141
  ensembl transcript: ENST00000394646
  gene symbol: RGS3
  hgvsc: ENST00000394646.3:c.1260-370C>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000496275
  gene symbol: RGS3
  hgvsc: ENST00000496275.1:n.289-370C>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000436168
  ensembl transcript: ENST00000462403
  gene symbol: RGS3
  hgvsc: ENST00000462403.1:c.141C>G
  hgvsp: ENST00000462403.1:c.141C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000487344
  gene symbol: RGS3
  hgvsc: ENST00000487344.1:n.2858-370C>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000343359
  ensembl transcript: ENST00000342620
  gene symbol: RGS3
  hgvsc: ENST00000342620.5:c.-10-370C>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000417994
  ensembl transcript: ENST00000467805
  gene symbol: RGS3
  hgvsc: ENST00000467805.2:c.579-370C>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363249
  ensembl transcript: ENST00000374134
  gene symbol: RGS3
  hgvsc: ENST00000374134.3:c.1044-370C>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000420356
  ensembl transcript: ENST00000462143
  gene symbol: RGS3
  hgvsc: ENST00000462143.1:c.1044-370C>G
  variant of: http://identifiers.org/hgnc/9999
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2233
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 900
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4294
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4847
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4337
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1953
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2588
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3307
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4442
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5269
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5474
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3338
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5596
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1657
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5208
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1750
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2448
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro47Pro
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

9-116356345-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 116356345
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 116356345
    reference: chr 9
allele count: 2
allele frequency: 1.675322499581169e-5
allele num: 119380
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000259406
  ensembl transcript: ENST00000350696
  gene symbol: RGS3
  hgvsc: ENST00000350696.5:c.3081-365T>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363255
  ensembl transcript: ENST00000374140
  gene symbol: RGS3
  hgvsc: ENST00000374140.2:c.3081-365T>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000340284
  ensembl transcript: ENST00000343817
  gene symbol: RGS3
  hgvsc: ENST00000343817.5:c.2238-365T>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000417994
  ensembl transcript: ENST00000467805
  gene symbol: RGS3
  hgvsc: ENST00000467805.2:c.579-365T>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000436168
  ensembl transcript: ENST00000462403
  gene symbol: RGS3
  hgvsc: ENST00000462403.1:c.146T>G
  hgvsp: ENSP00000436168.1:p.Leu49Arg
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000487344
  gene symbol: RGS3
  hgvsc: ENST00000487344.1:n.2858-365T>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000478599
  gene symbol: RGS3
  hgvsc: ENST00000478599.1:n.2925-365T>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000343359
  ensembl transcript: ENST00000342620
  gene symbol: RGS3
  hgvsc: ENST00000342620.5:c.-10-365T>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000496275
  gene symbol: RGS3
  hgvsc: ENST00000496275.1:n.289-365T>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000420356
  ensembl transcript: ENST00000462143
  gene symbol: RGS3
  hgvsc: ENST00000462143.1:c.1044-365T>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000378141
  ensembl transcript: ENST00000394646
  gene symbol: RGS3
  hgvsc: ENST00000394646.3:c.1260-365T>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363249
  ensembl transcript: ENST00000374134
  gene symbol: RGS3
  hgvsc: ENST00000374134.3:c.1044-365T>G
  variant of: http://identifiers.org/hgnc/9999
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2234
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1952
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3338
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5269
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4294
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1657
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1750
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2448
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3307
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 612
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4848
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5294
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5474
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5595
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4443
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2600
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu49Arg
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
population: Latino
reference allele: T
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum

9-116356361-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 116356361
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 116356361
    reference: chr 9
allele count: 2
allele frequency: 1.673360107095047e-5
allele num: 119520
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000478599
  gene symbol: RGS3
  hgvsc: ENST00000478599.1:n.2925-349C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000487344
  gene symbol: RGS3
  hgvsc: ENST00000487344.1:n.2858-349C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000340284
  ensembl transcript: ENST00000343817
  gene symbol: RGS3
  hgvsc: ENST00000343817.5:c.2238-349C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000259406
  ensembl transcript: ENST00000350696
  gene symbol: RGS3
  hgvsc: ENST00000350696.5:c.3081-349C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000420356
  ensembl transcript: ENST00000462143
  gene symbol: RGS3
  hgvsc: ENST00000462143.1:c.1044-349C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000436168
  ensembl transcript: ENST00000462403
  gene symbol: RGS3
  hgvsc: ENST00000462403.1:c.162C>T
  hgvsp: ENST00000462403.1:c.162C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000343359
  ensembl transcript: ENST00000342620
  gene symbol: RGS3
  hgvsc: ENST00000342620.5:c.-10-349C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000417994
  ensembl transcript: ENST00000467805
  gene symbol: RGS3
  hgvsc: ENST00000467805.2:c.579-349C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000378141
  ensembl transcript: ENST00000394646
  gene symbol: RGS3
  hgvsc: ENST00000394646.3:c.1260-349C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000496275
  gene symbol: RGS3
  hgvsc: ENST00000496275.1:n.289-349C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363255
  ensembl transcript: ENST00000374140
  gene symbol: RGS3
  hgvsc: ENST00000374140.2:c.3081-349C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363249
  ensembl transcript: ENST00000374134
  gene symbol: RGS3
  hgvsc: ENST00000374134.3:c.1044-349C>T
  variant of: http://identifiers.org/hgnc/9999
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2234
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3338
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4847
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1955
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 826
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4293
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2577
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5306
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4337
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1657
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3307
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4445
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5474
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2448
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1749
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5269
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser54Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: Other
population: Latino
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum

9-116356371-CTG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 116356371
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 116356369
    reference: chr 9
allele count: 1
allele frequency: 8.358548287333457e-6
allele num: 119638
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000417994
  ensembl transcript: ENST00000467805
  gene symbol: RGS3
  hgvsc: ENST00000467805.2:c.579-337_579-336delGT
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000378141
  ensembl transcript: ENST00000394646
  gene symbol: RGS3
  hgvsc: ENST00000394646.3:c.1260-337_1260-336delGT
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363249
  ensembl transcript: ENST00000374134
  gene symbol: RGS3
  hgvsc: ENST00000374134.3:c.1044-337_1044-336delGT
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363255
  ensembl transcript: ENST00000374140
  gene symbol: RGS3
  hgvsc: ENST00000374140.2:c.3081-337_3081-336delGT
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000478599
  gene symbol: RGS3
  hgvsc: ENST00000478599.1:n.2925-337_2925-336delGT
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000487344
  gene symbol: RGS3
  hgvsc: ENST00000487344.1:n.2858-337_2858-336delGT
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000259406
  ensembl transcript: ENST00000350696
  gene symbol: RGS3
  hgvsc: ENST00000350696.5:c.3081-337_3081-336delGT
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000436168
  ensembl transcript: ENST00000462403
  gene symbol: RGS3
  hgvsc: ENST00000462403.1:c.174_175delGT
  hgvsp: ENSP00000436168.1:p.Ser59Ter
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000340284
  ensembl transcript: ENST00000343817
  gene symbol: RGS3
  hgvsc: ENST00000343817.5:c.2238-337_2238-336delGT
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000420356
  ensembl transcript: ENST00000462143
  gene symbol: RGS3
  hgvsc: ENST00000462143.1:c.1044-337_1044-336delGT
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000496275
  gene symbol: RGS3
  hgvsc: ENST00000496275.1:n.289-337_289-336delGT
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000343359
  ensembl transcript: ENST00000342620
  gene symbol: RGS3
  hgvsc: ENST00000342620.5:c.-10-337_-10-336delGT
  variant of: http://identifiers.org/hgnc/9999
canonical: false
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1749
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1949
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4295
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5596
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2604
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3339
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 568
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4337
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5384
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 790
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5268
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4848
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5474
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2233
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1660
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4446
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3307
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser59Ter
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
reference allele: CTG
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD

9-116356373-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 116356373
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 116356373
    reference: chr 9
allele count: 87276
allele frequency: 7.242460956300931e-1
allele num: 120506
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000417994
  ensembl transcript: ENST00000467805
  gene symbol: RGS3
  hgvsc: ENST00000467805.2:c.579-337G>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000478599
  gene symbol: RGS3
  hgvsc: ENST00000478599.1:n.2925-337G>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000340284
  ensembl transcript: ENST00000343817
  gene symbol: RGS3
  hgvsc: ENST00000343817.5:c.2238-337G>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000496275
  gene symbol: RGS3
  hgvsc: ENST00000496275.1:n.289-337G>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000487344
  gene symbol: RGS3
  hgvsc: ENST00000487344.1:n.2858-337G>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363249
  ensembl transcript: ENST00000374134
  gene symbol: RGS3
  hgvsc: ENST00000374134.3:c.1044-337G>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363255
  ensembl transcript: ENST00000374140
  gene symbol: RGS3
  hgvsc: ENST00000374140.2:c.3081-337G>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000343359
  ensembl transcript: ENST00000342620
  gene symbol: RGS3
  hgvsc: ENST00000342620.5:c.-10-337G>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000378141
  ensembl transcript: ENST00000394646
  gene symbol: RGS3
  hgvsc: ENST00000394646.3:c.1260-337G>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000436168
  ensembl transcript: ENST00000462403
  gene symbol: RGS3
  hgvsc: ENST00000462403.1:c.174G>C
  hgvsp: ENST00000462403.1:c.174G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000420356
  ensembl transcript: ENST00000462143
  gene symbol: RGS3
  hgvsc: ENST00000462143.1:c.1044-337G>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000259406
  ensembl transcript: ENST00000350696
  gene symbol: RGS3
  hgvsc: ENST00000350696.5:c.3081-337G>C
  variant of: http://identifiers.org/hgnc/9999
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 2.75e1
  variant carriers: 496
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 8.25e1
  variant carriers: 251
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 7.75e1
  variant carriers: 192
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 6.75e1
  variant carriers: 158
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 3.25e1
  variant carriers: 388
genotype depth: GenotypeDepth
  all individuals: 993
  bin: 2.25e1
  variant carriers: 552
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 5.25e1
  variant carriers: 181
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 7.25e1
  variant carriers: 169
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 1.25e1
  variant carriers: 524
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 3.75e1
  variant carriers: 327
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 7.5e0
  variant carriers: 264
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 4.25e1
  variant carriers: 221
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 1.75e1
  variant carriers: 624
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 5.75e1
  variant carriers: 167
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 6.25e1
  variant carriers: 136
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 2.5e0
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 50457
  bin: 9.75e1
  variant carriers: 50124
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 4.75e1
  variant carriers: 205
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 9.25e1
  variant carriers: 370
genotype quality: GenotypeQuality
hgvs: p.Leu58Leu
num of homozygotes: 31913
population: Other
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: MQRankSum

9-116356373-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 116356373
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 116356373
    reference: chr 9
allele count: 12
allele frequency: 9.958010389524173e-5
allele num: 120506
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000340284
  ensembl transcript: ENST00000343817
  gene symbol: RGS3
  hgvsc: ENST00000343817.5:c.2238-337G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000420356
  ensembl transcript: ENST00000462143
  gene symbol: RGS3
  hgvsc: ENST00000462143.1:c.1044-337G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000259406
  ensembl transcript: ENST00000350696
  gene symbol: RGS3
  hgvsc: ENST00000350696.5:c.3081-337G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000478599
  gene symbol: RGS3
  hgvsc: ENST00000478599.1:n.2925-337G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000496275
  gene symbol: RGS3
  hgvsc: ENST00000496275.1:n.289-337G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363249
  ensembl transcript: ENST00000374134
  gene symbol: RGS3
  hgvsc: ENST00000374134.3:c.1044-337G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000417994
  ensembl transcript: ENST00000467805
  gene symbol: RGS3
  hgvsc: ENST00000467805.2:c.579-337G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000487344
  gene symbol: RGS3
  hgvsc: ENST00000487344.1:n.2858-337G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000436168
  ensembl transcript: ENST00000462403
  gene symbol: RGS3
  hgvsc: ENST00000462403.1:c.174G>A
  hgvsp: ENST00000462403.1:c.174G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000378141
  ensembl transcript: ENST00000394646
  gene symbol: RGS3
  hgvsc: ENST00000394646.3:c.1260-337G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000343359
  ensembl transcript: ENST00000342620
  gene symbol: RGS3
  hgvsc: ENST00000342620.5:c.-10-337G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363255
  ensembl transcript: ENST00000374140
  gene symbol: RGS3
  hgvsc: ENST00000374140.2:c.3081-337G>A
  variant of: http://identifiers.org/hgnc/9999
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 543
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 993
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 565
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50457
  bin: 9.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 510
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 467
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 479
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu58Leu
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP

9-116356375-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 116356375
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 116356375
    reference: chr 9
allele count: 2
allele frequency: 1.663450662053363e-5
allele num: 120232
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000417994
  ensembl transcript: ENST00000467805
  gene symbol: RGS3
  hgvsc: ENST00000467805.2:c.579-335C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000259406
  ensembl transcript: ENST00000350696
  gene symbol: RGS3
  hgvsc: ENST00000350696.5:c.3081-335C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000343359
  ensembl transcript: ENST00000342620
  gene symbol: RGS3
  hgvsc: ENST00000342620.5:c.-10-335C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000487344
  gene symbol: RGS3
  hgvsc: ENST00000487344.1:n.2858-335C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000496275
  gene symbol: RGS3
  hgvsc: ENST00000496275.1:n.289-335C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363249
  ensembl transcript: ENST00000374134
  gene symbol: RGS3
  hgvsc: ENST00000374134.3:c.1044-335C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000436168
  ensembl transcript: ENST00000462403
  gene symbol: RGS3
  hgvsc: ENST00000462403.1:c.176C>T
  hgvsp: ENSP00000436168.1:p.Ser59Phe
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000340284
  ensembl transcript: ENST00000343817
  gene symbol: RGS3
  hgvsc: ENST00000343817.5:c.2238-335C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000478599
  gene symbol: RGS3
  hgvsc: ENST00000478599.1:n.2925-335C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363255
  ensembl transcript: ENST00000374140
  gene symbol: RGS3
  hgvsc: ENST00000374140.2:c.3081-335C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000378141
  ensembl transcript: ENST00000394646
  gene symbol: RGS3
  hgvsc: ENST00000394646.3:c.1260-335C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000420356
  ensembl transcript: ENST00000462143
  gene symbol: RGS3
  hgvsc: ENST00000462143.1:c.1044-335C>T
  variant of: http://identifiers.org/hgnc/9999
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2183
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3575
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1696
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3154
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 490
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2597
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2066
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3848
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1856
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3531
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1390
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3882
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2458
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17926
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3874
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1782
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser59Phe
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: Other
population: Latino
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP

9-116356377-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 116356377
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 116356377
    reference: chr 9
allele count: 1
allele frequency: 8.319052293562717e-6
allele num: 120206
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000259406
  ensembl transcript: ENST00000350696
  gene symbol: RGS3
  hgvsc: ENST00000350696.5:c.3081-333G>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000417994
  ensembl transcript: ENST00000467805
  gene symbol: RGS3
  hgvsc: ENST00000467805.2:c.579-333G>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000340284
  ensembl transcript: ENST00000343817
  gene symbol: RGS3
  hgvsc: ENST00000343817.5:c.2238-333G>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363255
  ensembl transcript: ENST00000374140
  gene symbol: RGS3
  hgvsc: ENST00000374140.2:c.3081-333G>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363249
  ensembl transcript: ENST00000374134
  gene symbol: RGS3
  hgvsc: ENST00000374134.3:c.1044-333G>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000436168
  ensembl transcript: ENST00000462403
  gene symbol: RGS3
  hgvsc: ENST00000462403.1:c.178G>C
  hgvsp: ENSP00000436168.1:p.Glu60Gln
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000478599
  gene symbol: RGS3
  hgvsc: ENST00000478599.1:n.2925-333G>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000487344
  gene symbol: RGS3
  hgvsc: ENST00000487344.1:n.2858-333G>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000378141
  ensembl transcript: ENST00000394646
  gene symbol: RGS3
  hgvsc: ENST00000394646.3:c.1260-333G>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000420356
  ensembl transcript: ENST00000462143
  gene symbol: RGS3
  hgvsc: ENST00000462143.1:c.1044-333G>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000343359
  ensembl transcript: ENST00000342620
  gene symbol: RGS3
  hgvsc: ENST00000342620.5:c.-10-333G>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000496275
  gene symbol: RGS3
  hgvsc: ENST00000496275.1:n.289-333G>C
  variant of: http://identifiers.org/hgnc/9999
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3154
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3577
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2064
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3044
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1782
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2457
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1856
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1401
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2183
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3882
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3874
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17924
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3531
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2597
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3848
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Glu60Gln
num of homozygotes: 0
population: Other
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD

9-116356385-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 116356385
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 116356385
    reference: chr 9
allele count: 1
allele frequency: 8.334027835652971e-6
allele num: 119990
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000496275
  gene symbol: RGS3
  hgvsc: ENST00000496275.1:n.289-325G>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000436168
  ensembl transcript: ENST00000462403
  gene symbol: RGS3
  hgvsc: ENST00000462403.1:c.186G>T
  hgvsp: ENSP00000436168.1:p.Gln62His
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000487344
  gene symbol: RGS3
  hgvsc: ENST00000487344.1:n.2858-325G>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000478599
  gene symbol: RGS3
  hgvsc: ENST00000478599.1:n.2925-325G>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000378141
  ensembl transcript: ENST00000394646
  gene symbol: RGS3
  hgvsc: ENST00000394646.3:c.1260-325G>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363249
  ensembl transcript: ENST00000374134
  gene symbol: RGS3
  hgvsc: ENST00000374134.3:c.1044-325G>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000420356
  ensembl transcript: ENST00000462143
  gene symbol: RGS3
  hgvsc: ENST00000462143.1:c.1044-325G>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000340284
  ensembl transcript: ENST00000343817
  gene symbol: RGS3
  hgvsc: ENST00000343817.5:c.2238-325G>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000343359
  ensembl transcript: ENST00000342620
  gene symbol: RGS3
  hgvsc: ENST00000342620.5:c.-10-325G>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000259406
  ensembl transcript: ENST00000350696
  gene symbol: RGS3
  hgvsc: ENST00000350696.5:c.3081-325G>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363255
  ensembl transcript: ENST00000374140
  gene symbol: RGS3
  hgvsc: ENST00000374140.2:c.3081-325G>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000417994
  ensembl transcript: ENST00000467805
  gene symbol: RGS3
  hgvsc: ENST00000467805.2:c.579-325G>T
  variant of: http://identifiers.org/hgnc/9999
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1694
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17923
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3577
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1776
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2038
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1417
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2181
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3882
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3531
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3043
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2428
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3155
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3848
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2597
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3874
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln62His
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
population: African
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

9-116356385-GC-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 116356385
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 116356384
    reference: chr 9
allele count: 3
allele frequency: 2.500208350695891e-5
allele num: 119990
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000487344
  gene symbol: RGS3
  hgvsc: ENST00000487344.1:n.2858-321delC
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000378141
  ensembl transcript: ENST00000394646
  gene symbol: RGS3
  hgvsc: ENST00000394646.3:c.1260-321delC
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000417994
  ensembl transcript: ENST00000467805
  gene symbol: RGS3
  hgvsc: ENST00000467805.2:c.579-321delC
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000420356
  ensembl transcript: ENST00000462143
  gene symbol: RGS3
  hgvsc: ENST00000462143.1:c.1044-321delC
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000259406
  ensembl transcript: ENST00000350696
  gene symbol: RGS3
  hgvsc: ENST00000350696.5:c.3081-321delC
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363249
  ensembl transcript: ENST00000374134
  gene symbol: RGS3
  hgvsc: ENST00000374134.3:c.1044-321delC
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000340284
  ensembl transcript: ENST00000343817
  gene symbol: RGS3
  hgvsc: ENST00000343817.5:c.2238-321delC
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363255
  ensembl transcript: ENST00000374140
  gene symbol: RGS3
  hgvsc: ENST00000374140.2:c.3081-321delC
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000478599
  gene symbol: RGS3
  hgvsc: ENST00000478599.1:n.2925-321delC
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000436168
  ensembl transcript: ENST00000462403
  gene symbol: RGS3
  hgvsc: ENST00000462403.1:c.190delC
  hgvsp: ENSP00000436168.1:p.Arg64GlyfsTer75
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000343359
  ensembl transcript: ENST00000342620
  gene symbol: RGS3
  hgvsc: ENST00000342620.5:c.-10-321delC
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000496275
  gene symbol: RGS3
  hgvsc: ENST00000496275.1:n.289-321delC
  variant of: http://identifiers.org/hgnc/9999
canonical: false
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1694
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3155
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 735
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2597
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1859
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2181
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2038
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 508
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3531
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3874
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1776
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1417
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3577
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3848
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3882
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3043
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17923
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
hgvs: p.Arg64GlyfsTer75
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: South Asian
reference allele: GC
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum

http://identifiers.org/exac.variant/9-116356389-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 116356389
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 116356389
    reference: chr 9
allele count: 11
allele frequency: 9.167889051873583e-5
allele num: 119984
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000417994
  ensembl transcript: ENST00000467805
  gene symbol: RGS3
  hgvsc: ENST00000467805.2:c.579-321C>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000436168
  ensembl transcript: ENST00000462403
  gene symbol: RGS3
  hgvsc: ENST00000462403.1:c.190C>A
  hgvsp: ENST00000462403.1:c.190C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000378141
  ensembl transcript: ENST00000394646
  gene symbol: RGS3
  hgvsc: ENST00000394646.3:c.1260-321C>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000343359
  ensembl transcript: ENST00000342620
  gene symbol: RGS3
  hgvsc: ENST00000342620.5:c.-10-321C>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363255
  ensembl transcript: ENST00000374140
  gene symbol: RGS3
  hgvsc: ENST00000374140.2:c.3081-321C>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000259406
  ensembl transcript: ENST00000350696
  gene symbol: RGS3
  hgvsc: ENST00000350696.5:c.3081-321C>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000340284
  ensembl transcript: ENST00000343817
  gene symbol: RGS3
  hgvsc: ENST00000343817.5:c.2238-321C>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000487344
  gene symbol: RGS3
  hgvsc: ENST00000487344.1:n.2858-321C>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000496275
  gene symbol: RGS3
  hgvsc: ENST00000496275.1:n.289-321C>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000478599
  gene symbol: RGS3
  hgvsc: ENST00000478599.1:n.2925-321C>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000420356
  ensembl transcript: ENST00000462143
  gene symbol: RGS3
  hgvsc: ENST00000462143.1:c.1044-321C>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363249
  ensembl transcript: ENST00000374134
  gene symbol: RGS3
  hgvsc: ENST00000374134.3:c.1044-321C>A
  variant of: http://identifiers.org/hgnc/9999
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3529
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1692
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3578
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1859
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1772
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2027
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3849
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1469
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2424
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3047
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3155
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2593
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3879
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2181
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3874
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg64Arg
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD

9-116356389-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 116356389
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 116356389
    reference: chr 9
allele count: 400
allele frequency: 3.333777837044939e-3
allele num: 119984
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000478599
  gene symbol: RGS3
  hgvsc: ENST00000478599.1:n.2925-321C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363255
  ensembl transcript: ENST00000374140
  gene symbol: RGS3
  hgvsc: ENST00000374140.2:c.3081-321C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000417994
  ensembl transcript: ENST00000467805
  gene symbol: RGS3
  hgvsc: ENST00000467805.2:c.579-321C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000436168
  ensembl transcript: ENST00000462403
  gene symbol: RGS3
  hgvsc: ENST00000462403.1:c.190C>T
  hgvsp: ENSP00000436168.1:p.Arg64Trp
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363249
  ensembl transcript: ENST00000374134
  gene symbol: RGS3
  hgvsc: ENST00000374134.3:c.1044-321C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000343359
  ensembl transcript: ENST00000342620
  gene symbol: RGS3
  hgvsc: ENST00000342620.5:c.-10-321C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000420356
  ensembl transcript: ENST00000462143
  gene symbol: RGS3
  hgvsc: ENST00000462143.1:c.1044-321C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000340284
  ensembl transcript: ENST00000343817
  gene symbol: RGS3
  hgvsc: ENST00000343817.5:c.2238-321C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000259406
  ensembl transcript: ENST00000350696
  gene symbol: RGS3
  hgvsc: ENST00000350696.5:c.3081-321C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000487344
  gene symbol: RGS3
  hgvsc: ENST00000487344.1:n.2858-321C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000496275
  gene symbol: RGS3
  hgvsc: ENST00000496275.1:n.289-321C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000378141
  ensembl transcript: ENST00000394646
  gene symbol: RGS3
  hgvsc: ENST00000394646.3:c.1260-321C>T
  variant of: http://identifiers.org/hgnc/9999
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17926
  bin: 9.75e1
  variant carriers: 296
genotype depth: GenotypeDepth
  all individuals: 2027
  bin: 3.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 3529
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3155
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3047
  bin: 6.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2181
  bin: 5.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 466
  bin: 1.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2424
  bin: 2.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 2593
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1692
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3578
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1859
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1772
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1469
  bin: 2.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 3849
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 1.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 3874
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Arg64Trp
num of homozygotes: 12
population: African
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ

9-116356393-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 116356393
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 116356393
    reference: chr 9
allele count: 1
allele frequency: 8.324869715788949e-6
allele num: 120122
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000340284
  ensembl transcript: ENST00000343817
  gene symbol: RGS3
  hgvsc: ENST00000343817.5:c.2238-317T>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000487344
  gene symbol: RGS3
  hgvsc: ENST00000487344.1:n.2858-317T>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000496275
  gene symbol: RGS3
  hgvsc: ENST00000496275.1:n.289-317T>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000378141
  ensembl transcript: ENST00000394646
  gene symbol: RGS3
  hgvsc: ENST00000394646.3:c.1260-317T>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000259406
  ensembl transcript: ENST00000350696
  gene symbol: RGS3
  hgvsc: ENST00000350696.5:c.3081-317T>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000343359
  ensembl transcript: ENST00000342620
  gene symbol: RGS3
  hgvsc: ENST00000342620.5:c.-10-317T>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363249
  ensembl transcript: ENST00000374134
  gene symbol: RGS3
  hgvsc: ENST00000374134.3:c.1044-317T>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000436168
  ensembl transcript: ENST00000462403
  gene symbol: RGS3
  hgvsc: ENST00000462403.1:c.194T>C
  hgvsp: ENSP00000436168.1:p.Leu65Pro
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000417994
  ensembl transcript: ENST00000467805
  gene symbol: RGS3
  hgvsc: ENST00000467805.2:c.579-317T>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000478599
  gene symbol: RGS3
  hgvsc: ENST00000478599.1:n.2925-317T>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000420356
  ensembl transcript: ENST00000462143
  gene symbol: RGS3
  hgvsc: ENST00000462143.1:c.1044-317T>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363255
  ensembl transcript: ENST00000374140
  gene symbol: RGS3
  hgvsc: ENST00000374140.2:c.3081-317T>C
  variant of: http://identifiers.org/hgnc/9999
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2611
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3609
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2194
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3064
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3898
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2428
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17691
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 755
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1537
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3894
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1702
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1877
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3554
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2031
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1773
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3866
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu65Pro
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: T
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum

9-116356394-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 116356394
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 116356394
    reference: chr 9
allele count: 1
allele frequency: 8.325008325008325e-6
allele num: 120120
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000487344
  gene symbol: RGS3
  hgvsc: ENST00000487344.1:n.2858-316T>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363249
  ensembl transcript: ENST00000374134
  gene symbol: RGS3
  hgvsc: ENST00000374134.3:c.1044-316T>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000343359
  ensembl transcript: ENST00000342620
  gene symbol: RGS3
  hgvsc: ENST00000342620.5:c.-10-316T>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000378141
  ensembl transcript: ENST00000394646
  gene symbol: RGS3
  hgvsc: ENST00000394646.3:c.1260-316T>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363255
  ensembl transcript: ENST00000374140
  gene symbol: RGS3
  hgvsc: ENST00000374140.2:c.3081-316T>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000417994
  ensembl transcript: ENST00000467805
  gene symbol: RGS3
  hgvsc: ENST00000467805.2:c.579-316T>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000340284
  ensembl transcript: ENST00000343817
  gene symbol: RGS3
  hgvsc: ENST00000343817.5:c.2238-316T>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000259406
  ensembl transcript: ENST00000350696
  gene symbol: RGS3
  hgvsc: ENST00000350696.5:c.3081-316T>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000478599
  gene symbol: RGS3
  hgvsc: ENST00000478599.1:n.2925-316T>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000436168
  ensembl transcript: ENST00000462403
  gene symbol: RGS3
  hgvsc: ENST00000462403.1:c.195T>G
  hgvsp: ENST00000462403.1:c.195T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000420356
  ensembl transcript: ENST00000462143
  gene symbol: RGS3
  hgvsc: ENST00000462143.1:c.1044-316T>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000496275
  gene symbol: RGS3
  hgvsc: ENST00000496275.1:n.289-316T>G
  variant of: http://identifiers.org/hgnc/9999
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3064
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3554
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1877
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1772
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1702
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3893
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2426
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 92
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17692
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2032
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1540
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3171
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2194
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2611
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3866
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3898
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu65Leu
num of homozygotes: 0
population: Other
population: Latino
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP

9-116356399-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 116356399
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 116356399
    reference: chr 9
allele count: 30
allele frequency: 2.497377753358973e-4
allele num: 120126
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363255
  ensembl transcript: ENST00000374140
  gene symbol: RGS3
  hgvsc: ENST00000374140.2:c.3081-311C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000487344
  gene symbol: RGS3
  hgvsc: ENST00000487344.1:n.2858-311C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000436168
  ensembl transcript: ENST00000462403
  gene symbol: RGS3
  hgvsc: ENST00000462403.1:c.200C>T
  hgvsp: ENSP00000436168.1:p.Pro67Leu
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000420356
  ensembl transcript: ENST00000462143
  gene symbol: RGS3
  hgvsc: ENST00000462143.1:c.1044-311C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000340284
  ensembl transcript: ENST00000343817
  gene symbol: RGS3
  hgvsc: ENST00000343817.5:c.2238-311C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363249
  ensembl transcript: ENST00000374134
  gene symbol: RGS3
  hgvsc: ENST00000374134.3:c.1044-311C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000378141
  ensembl transcript: ENST00000394646
  gene symbol: RGS3
  hgvsc: ENST00000394646.3:c.1260-311C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000259406
  ensembl transcript: ENST00000350696
  gene symbol: RGS3
  hgvsc: ENST00000350696.5:c.3081-311C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000478599
  gene symbol: RGS3
  hgvsc: ENST00000478599.1:n.2925-311C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000417994
  ensembl transcript: ENST00000467805
  gene symbol: RGS3
  hgvsc: ENST00000467805.2:c.579-311C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000343359
  ensembl transcript: ENST00000342620
  gene symbol: RGS3
  hgvsc: ENST00000342620.5:c.-10-311C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000496275
  gene symbol: RGS3
  hgvsc: ENST00000496275.1:n.289-311C>T
  variant of: http://identifiers.org/hgnc/9999
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2025
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3608
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3554
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1637
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1875
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3171
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3895
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1768
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2610
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3064
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1704
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2430
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 728
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2194
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3867
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3898
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro67Leu
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
population: Latino
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ

9-116356402-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 116356402
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 116356402
    reference: chr 9
allele count: 1
allele frequency: 8.324038157390913e-6
allele num: 120134
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000340284
  ensembl transcript: ENST00000343817
  gene symbol: RGS3
  hgvsc: ENST00000343817.5:c.2238-308G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000496275
  gene symbol: RGS3
  hgvsc: ENST00000496275.1:n.289-308G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000487344
  gene symbol: RGS3
  hgvsc: ENST00000487344.1:n.2858-308G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000259406
  ensembl transcript: ENST00000350696
  gene symbol: RGS3
  hgvsc: ENST00000350696.5:c.3081-308G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000436168
  ensembl transcript: ENST00000462403
  gene symbol: RGS3
  hgvsc: ENST00000462403.1:c.203G>A
  hgvsp: ENSP00000436168.1:p.Gly68Glu
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363255
  ensembl transcript: ENST00000374140
  gene symbol: RGS3
  hgvsc: ENST00000374140.2:c.3081-308G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000417994
  ensembl transcript: ENST00000467805
  gene symbol: RGS3
  hgvsc: ENST00000467805.2:c.579-308G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000420356
  ensembl transcript: ENST00000462143
  gene symbol: RGS3
  hgvsc: ENST00000462143.1:c.1044-308G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000478599
  gene symbol: RGS3
  hgvsc: ENST00000478599.1:n.2925-308G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000343359
  ensembl transcript: ENST00000342620
  gene symbol: RGS3
  hgvsc: ENST00000342620.5:c.-10-308G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363249
  ensembl transcript: ENST00000374134
  gene symbol: RGS3
  hgvsc: ENST00000374134.3:c.1044-308G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000378141
  ensembl transcript: ENST00000394646
  gene symbol: RGS3
  hgvsc: ENST00000394646.3:c.1260-308G>A
  variant of: http://identifiers.org/hgnc/9999
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2025
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2437
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2194
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3174
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3557
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3870
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1878
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17667
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1705
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1722
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1770
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 700
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2612
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3609
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3898
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3900
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly68Glu
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD

9-116356405-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 116356405
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 116356405
    reference: chr 9
allele count: 1
allele frequency: 8.323761008173934e-6
allele num: 120138
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000496275
  gene symbol: RGS3
  hgvsc: ENST00000496275.1:n.289-305G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000420356
  ensembl transcript: ENST00000462143
  gene symbol: RGS3
  hgvsc: ENST00000462143.1:c.1044-305G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000340284
  ensembl transcript: ENST00000343817
  gene symbol: RGS3
  hgvsc: ENST00000343817.5:c.2238-305G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000487344
  gene symbol: RGS3
  hgvsc: ENST00000487344.1:n.2858-305G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363255
  ensembl transcript: ENST00000374140
  gene symbol: RGS3
  hgvsc: ENST00000374140.2:c.3081-305G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000436168
  ensembl transcript: ENST00000462403
  gene symbol: RGS3
  hgvsc: ENST00000462403.1:c.206G>A
  hgvsp: ENSP00000436168.1:p.Ser69Asn
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000478599
  gene symbol: RGS3
  hgvsc: ENST00000478599.1:n.2925-305G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000378141
  ensembl transcript: ENST00000394646
  gene symbol: RGS3
  hgvsc: ENST00000394646.3:c.1260-305G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000343359
  ensembl transcript: ENST00000342620
  gene symbol: RGS3
  hgvsc: ENST00000342620.5:c.-10-305G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000417994
  ensembl transcript: ENST00000467805
  gene symbol: RGS3
  hgvsc: ENST00000467805.2:c.579-305G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000259406
  ensembl transcript: ENST00000350696
  gene symbol: RGS3
  hgvsc: ENST00000350696.5:c.3081-305G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363249
  ensembl transcript: ENST00000374134
  gene symbol: RGS3
  hgvsc: ENST00000374134.3:c.1044-305G>A
  variant of: http://identifiers.org/hgnc/9999
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3900
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2021
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1879
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3609
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2194
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 671
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2461
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3174
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17666
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1804
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3898
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3063
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3557
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3871
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2610
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1700
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser69Asn
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum

9-116356411-T-TC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 116356411
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 116356412
    reference: chr 9
allele count: 28
allele frequency: 2.329295887128977e-4
allele num: 120208
alternate allele: TC
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000340284
  ensembl transcript: ENST00000343817
  gene symbol: RGS3
  hgvsc: ENST00000343817.5:c.2238-298dupC
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000496275
  gene symbol: RGS3
  hgvsc: ENST00000496275.1:n.289-298dupC
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363249
  ensembl transcript: ENST00000374134
  gene symbol: RGS3
  hgvsc: ENST00000374134.3:c.1044-298dupC
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000487344
  gene symbol: RGS3
  hgvsc: ENST00000487344.1:n.2858-298dupC
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363255
  ensembl transcript: ENST00000374140
  gene symbol: RGS3
  hgvsc: ENST00000374140.2:c.3081-298dupC
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000378141
  ensembl transcript: ENST00000394646
  gene symbol: RGS3
  hgvsc: ENST00000394646.3:c.1260-298dupC
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000417994
  ensembl transcript: ENST00000467805
  gene symbol: RGS3
  hgvsc: ENST00000467805.2:c.579-298dupC
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000420356
  ensembl transcript: ENST00000462143
  gene symbol: RGS3
  hgvsc: ENST00000462143.1:c.1044-298dupC
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000478599
  gene symbol: RGS3
  hgvsc: ENST00000478599.1:n.2925-298dupC
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000259406
  ensembl transcript: ENST00000350696
  gene symbol: RGS3
  hgvsc: ENST00000350696.5:c.3081-298dupC
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000436168
  ensembl transcript: ENST00000462403
  gene symbol: RGS3
  hgvsc: ENST00000462403.1:c.213dupC
  hgvsp: ENSP00000436168.1:p.Ile72HisfsTer85
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000343359
  ensembl transcript: ENST00000342620
  gene symbol: RGS3
  hgvsc: ENST00000342620.5:c.-10-298dupC
  variant of: http://identifiers.org/hgnc/9999
canonical: false
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2016
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2193
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17665
  bin: 9.75e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 1773
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3609
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2487
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 636
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1700
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3900
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1877
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3174
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3557
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2610
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3870
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3063
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1880
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile72HisfsTer85
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff

9-116356415-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 116356415
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 116356415
    reference: chr 9
allele count: 5
allele frequency: 4.159110948443661e-5
allele num: 120218
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363249
  ensembl transcript: ENST00000374134
  gene symbol: RGS3
  hgvsc: ENST00000374134.3:c.1044-295C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000420356
  ensembl transcript: ENST00000462143
  gene symbol: RGS3
  hgvsc: ENST00000462143.1:c.1044-295C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000487344
  gene symbol: RGS3
  hgvsc: ENST00000487344.1:n.2858-295C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000340284
  ensembl transcript: ENST00000343817
  gene symbol: RGS3
  hgvsc: ENST00000343817.5:c.2238-295C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000417994
  ensembl transcript: ENST00000467805
  gene symbol: RGS3
  hgvsc: ENST00000467805.2:c.579-295C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000436168
  ensembl transcript: ENST00000462403
  gene symbol: RGS3
  hgvsc: ENST00000462403.1:c.216C>T
  hgvsp: ENST00000462403.1:c.216C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000378141
  ensembl transcript: ENST00000394646
  gene symbol: RGS3
  hgvsc: ENST00000394646.3:c.1260-295C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000343359
  ensembl transcript: ENST00000342620
  gene symbol: RGS3
  hgvsc: ENST00000342620.5:c.-10-295C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000259406
  ensembl transcript: ENST00000350696
  gene symbol: RGS3
  hgvsc: ENST00000350696.5:c.3081-295C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000478599
  gene symbol: RGS3
  hgvsc: ENST00000478599.1:n.2925-295C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363255
  ensembl transcript: ENST00000374140
  gene symbol: RGS3
  hgvsc: ENST00000374140.2:c.3081-295C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000496275
  gene symbol: RGS3
  hgvsc: ENST00000496275.1:n.289-295C>T
  variant of: http://identifiers.org/hgnc/9999
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2611
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3902
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 523
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3609
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3556
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1922
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2486
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17652
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1771
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3899
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2014
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2196
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3874
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1876
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1699
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3065
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile72Ile
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: Other
reference allele: C
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD

9-116356418-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 116356418
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 116356418
    reference: chr 9
allele count: 1
allele frequency: 8.31766839119658e-6
allele num: 120226
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000478599
  gene symbol: RGS3
  hgvsc: ENST00000478599.1:n.2925-292G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000417994
  ensembl transcript: ENST00000467805
  gene symbol: RGS3
  hgvsc: ENST00000467805.2:c.579-292G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363255
  ensembl transcript: ENST00000374140
  gene symbol: RGS3
  hgvsc: ENST00000374140.2:c.3081-292G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000420356
  ensembl transcript: ENST00000462143
  gene symbol: RGS3
  hgvsc: ENST00000462143.1:c.1044-292G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000340284
  ensembl transcript: ENST00000343817
  gene symbol: RGS3
  hgvsc: ENST00000343817.5:c.2238-292G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000378141
  ensembl transcript: ENST00000394646
  gene symbol: RGS3
  hgvsc: ENST00000394646.3:c.1260-292G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000343359
  ensembl transcript: ENST00000342620
  gene symbol: RGS3
  hgvsc: ENST00000342620.5:c.-10-292G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000487344
  gene symbol: RGS3
  hgvsc: ENST00000487344.1:n.2858-292G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000436168
  ensembl transcript: ENST00000462403
  gene symbol: RGS3
  hgvsc: ENST00000462403.1:c.219G>A
  hgvsp: ENST00000462403.1:c.219G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363249
  ensembl transcript: ENST00000374134
  gene symbol: RGS3
  hgvsc: ENST00000374134.3:c.1044-292G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000259406
  ensembl transcript: ENST00000350696
  gene symbol: RGS3
  hgvsc: ENST00000350696.5:c.3081-292G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000496275
  gene symbol: RGS3
  hgvsc: ENST00000496275.1:n.289-292G>A
  variant of: http://identifiers.org/hgnc/9999
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2501
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1770
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2611
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1941
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3874
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1700
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2018
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2196
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17648
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3065
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1875
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3558
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3900
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3175
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3610
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg73Arg
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: Latino
population: African
population: East Asian
reference allele: G
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: InbreedingCoeff

9-116356430-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 116356430
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 116356430
    reference: chr 9
allele count: 3114
allele frequency: 2.589346593271357e-2
allele num: 120262
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000497435
  gene symbol: RGS3
  hgvsc: ENST00000497435.1:n.7G>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000496275
  gene symbol: RGS3
  hgvsc: ENST00000496275.1:n.289-280G>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000343359
  ensembl transcript: ENST00000342620
  gene symbol: RGS3
  hgvsc: ENST00000342620.5:c.-10-280G>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000478599
  gene symbol: RGS3
  hgvsc: ENST00000478599.1:n.2925-280G>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000259406
  ensembl transcript: ENST00000350696
  gene symbol: RGS3
  hgvsc: ENST00000350696.5:c.3081-280G>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000436168
  ensembl transcript: ENST00000462403
  gene symbol: RGS3
  hgvsc: ENST00000462403.1:c.231G>T
  hgvsp: ENSP00000436168.1:p.Gln77His
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363249
  ensembl transcript: ENST00000374134
  gene symbol: RGS3
  hgvsc: ENST00000374134.3:c.1044-280G>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000417994
  ensembl transcript: ENST00000467805
  gene symbol: RGS3
  hgvsc: ENST00000467805.2:c.579-280G>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000487344
  gene symbol: RGS3
  hgvsc: ENST00000487344.1:n.2858-280G>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000378141
  ensembl transcript: ENST00000394646
  gene symbol: RGS3
  hgvsc: ENST00000394646.3:c.1260-280G>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363255
  ensembl transcript: ENST00000374140
  gene symbol: RGS3
  hgvsc: ENST00000374140.2:c.3081-280G>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000420356
  ensembl transcript: ENST00000462143
  gene symbol: RGS3
  hgvsc: ENST00000462143.1:c.1044-280G>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000340284
  ensembl transcript: ENST00000343817
  gene symbol: RGS3
  hgvsc: ENST00000343817.5:c.2238-280G>T
  variant of: http://identifiers.org/hgnc/9999
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2139
  bin: 5.25e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 3538
  bin: 8.75e1
  variant carriers: 61
genotype depth: GenotypeDepth
  all individuals: 2986
  bin: 6.25e1
  variant carriers: 49
genotype depth: GenotypeDepth
  all individuals: 1759
  bin: 3.75e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 1.75e1
  variant carriers: 50
genotype depth: GenotypeDepth
  all individuals: 3549
  bin: 6.75e1
  variant carriers: 46
genotype depth: GenotypeDepth
  all individuals: 1994
  bin: 3.25e1
  variant carriers: 36
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 7.5e0
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 18272
  bin: 9.75e1
  variant carriers: 2361
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 1.25e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 3837
  bin: 7.75e1
  variant carriers: 50
genotype depth: GenotypeDepth
  all individuals: 1732
  bin: 2.25e1
  variant carriers: 40
genotype depth: GenotypeDepth
  all individuals: 2557
  bin: 5.75e1
  variant carriers: 38
genotype depth: GenotypeDepth
  all individuals: 1817
  bin: 4.75e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3858
  bin: 7.25e1
  variant carriers: 51
genotype depth: GenotypeDepth
  all individuals: 1674
  bin: 4.25e1
  variant carriers: 19
genotype quality: GenotypeQuality
hgvs: p.Gln77His
num of homozygotes: 60
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum

9-116356435-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 116356435
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 116356435
    reference: chr 9
allele count: 1
allele frequency: 8.32209850035785e-6
allele num: 120162
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000497435
  gene symbol: RGS3
  hgvsc: ENST00000497435.1:n.12C>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000478599
  gene symbol: RGS3
  hgvsc: ENST00000478599.1:n.2925-275C>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000496275
  gene symbol: RGS3
  hgvsc: ENST00000496275.1:n.289-275C>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000343359
  ensembl transcript: ENST00000342620
  gene symbol: RGS3
  hgvsc: ENST00000342620.5:c.-10-275C>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000417994
  ensembl transcript: ENST00000467805
  gene symbol: RGS3
  hgvsc: ENST00000467805.2:c.579-275C>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000420356
  ensembl transcript: ENST00000462143
  gene symbol: RGS3
  hgvsc: ENST00000462143.1:c.1044-275C>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000259406
  ensembl transcript: ENST00000350696
  gene symbol: RGS3
  hgvsc: ENST00000350696.5:c.3081-275C>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363249
  ensembl transcript: ENST00000374134
  gene symbol: RGS3
  hgvsc: ENST00000374134.3:c.1044-275C>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000436168
  ensembl transcript: ENST00000462403
  gene symbol: RGS3
  hgvsc: ENST00000462403.1:c.236C>G
  hgvsp: ENSP00000436168.1:p.Ala79Gly
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000340284
  ensembl transcript: ENST00000343817
  gene symbol: RGS3
  hgvsc: ENST00000343817.5:c.2238-275C>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000487344
  gene symbol: RGS3
  hgvsc: ENST00000487344.1:n.2858-275C>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363255
  ensembl transcript: ENST00000374140
  gene symbol: RGS3
  hgvsc: ENST00000374140.2:c.3081-275C>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000378141
  ensembl transcript: ENST00000394646
  gene symbol: RGS3
  hgvsc: ENST00000394646.3:c.1260-275C>G
  variant of: http://identifiers.org/hgnc/9999
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2669
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3116
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2523
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3996
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2234
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4026
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3996
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2052
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1892
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3661
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1751
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1798
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16686
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Ala79Gly
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: QD

9-116356435-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 116356435
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 116356435
    reference: chr 9
allele count: 2
allele frequency: 1.66441970007157e-5
allele num: 120162
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000417994
  ensembl transcript: ENST00000467805
  gene symbol: RGS3
  hgvsc: ENST00000467805.2:c.579-275C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000496275
  gene symbol: RGS3
  hgvsc: ENST00000496275.1:n.289-275C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363249
  ensembl transcript: ENST00000374134
  gene symbol: RGS3
  hgvsc: ENST00000374134.3:c.1044-275C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000259406
  ensembl transcript: ENST00000350696
  gene symbol: RGS3
  hgvsc: ENST00000350696.5:c.3081-275C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000497435
  gene symbol: RGS3
  hgvsc: ENST00000497435.1:n.12C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000478599
  gene symbol: RGS3
  hgvsc: ENST00000478599.1:n.2925-275C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000343359
  ensembl transcript: ENST00000342620
  gene symbol: RGS3
  hgvsc: ENST00000342620.5:c.-10-275C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000340284
  ensembl transcript: ENST00000343817
  gene symbol: RGS3
  hgvsc: ENST00000343817.5:c.2238-275C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000436168
  ensembl transcript: ENST00000462403
  gene symbol: RGS3
  hgvsc: ENST00000462403.1:c.236C>T
  hgvsp: ENSP00000436168.1:p.Ala79Val
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000378141
  ensembl transcript: ENST00000394646
  gene symbol: RGS3
  hgvsc: ENST00000394646.3:c.1260-275C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363255
  ensembl transcript: ENST00000374140
  gene symbol: RGS3
  hgvsc: ENST00000374140.2:c.3081-275C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000420356
  ensembl transcript: ENST00000462143
  gene symbol: RGS3
  hgvsc: ENST00000462143.1:c.1044-275C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000487344
  gene symbol: RGS3
  hgvsc: ENST00000487344.1:n.2858-275C>T
  variant of: http://identifiers.org/hgnc/9999
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3996
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3661
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2234
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3116
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2669
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3254
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2052
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2523
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16686
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1658
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1751
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3698
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1892
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala79Val
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP

9-116356436-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 116356436
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 116356436
    reference: chr 9
allele count: 1
allele frequency: 8.323483877411729e-6
allele num: 120142
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000259406
  ensembl transcript: ENST00000350696
  gene symbol: RGS3
  hgvsc: ENST00000350696.5:c.3081-274G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000478599
  gene symbol: RGS3
  hgvsc: ENST00000478599.1:n.2925-274G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000436168
  ensembl transcript: ENST00000462403
  gene symbol: RGS3
  hgvsc: ENST00000462403.1:c.237G>A
  hgvsp: ENST00000462403.1:c.237G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000487344
  gene symbol: RGS3
  hgvsc: ENST00000487344.1:n.2858-274G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000378141
  ensembl transcript: ENST00000394646
  gene symbol: RGS3
  hgvsc: ENST00000394646.3:c.1260-274G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363255
  ensembl transcript: ENST00000374140
  gene symbol: RGS3
  hgvsc: ENST00000374140.2:c.3081-274G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000340284
  ensembl transcript: ENST00000343817
  gene symbol: RGS3
  hgvsc: ENST00000343817.5:c.2238-274G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000496275
  gene symbol: RGS3
  hgvsc: ENST00000496275.1:n.289-274G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000417994
  ensembl transcript: ENST00000467805
  gene symbol: RGS3
  hgvsc: ENST00000467805.2:c.579-274G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000497435
  gene symbol: RGS3
  hgvsc: ENST00000497435.1:n.13G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363249
  ensembl transcript: ENST00000374134
  gene symbol: RGS3
  hgvsc: ENST00000374134.3:c.1044-274G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000420356
  ensembl transcript: ENST00000462143
  gene symbol: RGS3
  hgvsc: ENST00000462143.1:c.1044-274G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000343359
  ensembl transcript: ENST00000342620
  gene symbol: RGS3
  hgvsc: ENST00000342620.5:c.-10-274G>A
  variant of: http://identifiers.org/hgnc/9999
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3116
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3254
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1747
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3698
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 837
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2508
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2043
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4027
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2233
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3996
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16684
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1892
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1798
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1583
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala79Ala
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: ReadPosRankSum

9-116356441-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 116356441
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 116356441
    reference: chr 9
allele count: 2
allele frequency: 1.66497394315779e-5
allele num: 120122
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000487344
  gene symbol: RGS3
  hgvsc: ENST00000487344.1:n.2858-269T>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000378141
  ensembl transcript: ENST00000394646
  gene symbol: RGS3
  hgvsc: ENST00000394646.3:c.1260-269T>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363249
  ensembl transcript: ENST00000374134
  gene symbol: RGS3
  hgvsc: ENST00000374134.3:c.1044-269T>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000478599
  gene symbol: RGS3
  hgvsc: ENST00000478599.1:n.2925-269T>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000340284
  ensembl transcript: ENST00000343817
  gene symbol: RGS3
  hgvsc: ENST00000343817.5:c.2238-269T>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363255
  ensembl transcript: ENST00000374140
  gene symbol: RGS3
  hgvsc: ENST00000374140.2:c.3081-269T>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000496275
  gene symbol: RGS3
  hgvsc: ENST00000496275.1:n.289-269T>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000436168
  ensembl transcript: ENST00000462403
  gene symbol: RGS3
  hgvsc: ENST00000462403.1:c.242T>A
  hgvsp: ENSP00000436168.1:p.Val81Glu
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000497435
  gene symbol: RGS3
  hgvsc: ENST00000497435.1:n.18T>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000259406
  ensembl transcript: ENST00000350696
  gene symbol: RGS3
  hgvsc: ENST00000350696.5:c.3081-269T>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000420356
  ensembl transcript: ENST00000462143
  gene symbol: RGS3
  hgvsc: ENST00000462143.1:c.1044-269T>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000417994
  ensembl transcript: ENST00000467805
  gene symbol: RGS3
  hgvsc: ENST00000467805.2:c.579-269T>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000343359
  ensembl transcript: ENST00000342620
  gene symbol: RGS3
  hgvsc: ENST00000342620.5:c.-10-269T>A
  variant of: http://identifiers.org/hgnc/9999
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3117
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1745
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2233
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3996
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16685
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2669
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4026
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2465
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2024
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3253
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3997
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3698
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3661
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val81Glu
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
population: African
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD

9-116356453-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 116356453
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 116356453
    reference: chr 9
allele count: 378
allele frequency: 3.15115542365534e-3
allele num: 119956
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000436168
  ensembl transcript: ENST00000462403
  gene symbol: RGS3
  hgvsc: ENST00000462403.1:c.254G>A
  hgvsp: ENSP00000436168.1:p.Cys85Tyr
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000420356
  ensembl transcript: ENST00000462143
  gene symbol: RGS3
  hgvsc: ENST00000462143.1:c.1044-257G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000478599
  gene symbol: RGS3
  hgvsc: ENST00000478599.1:n.2925-257G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363249
  ensembl transcript: ENST00000374134
  gene symbol: RGS3
  hgvsc: ENST00000374134.3:c.1044-257G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000378141
  ensembl transcript: ENST00000394646
  gene symbol: RGS3
  hgvsc: ENST00000394646.3:c.1260-257G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000417994
  ensembl transcript: ENST00000467805
  gene symbol: RGS3
  hgvsc: ENST00000467805.2:c.579-257G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000497435
  gene symbol: RGS3
  hgvsc: ENST00000497435.1:n.30G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000487344
  gene symbol: RGS3
  hgvsc: ENST00000487344.1:n.2858-257G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000343359
  ensembl transcript: ENST00000342620
  gene symbol: RGS3
  hgvsc: ENST00000342620.5:c.-10-257G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000259406
  ensembl transcript: ENST00000350696
  gene symbol: RGS3
  hgvsc: ENST00000350696.5:c.3081-257G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363255
  ensembl transcript: ENST00000374140
  gene symbol: RGS3
  hgvsc: ENST00000374140.2:c.3081-257G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000496275
  gene symbol: RGS3
  hgvsc: ENST00000496275.1:n.289-257G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000340284
  ensembl transcript: ENST00000343817
  gene symbol: RGS3
  hgvsc: ENST00000343817.5:c.2238-257G>A
  variant of: http://identifiers.org/hgnc/9999
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1886
  bin: 4.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 3689
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4023
  bin: 7.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 3114
  bin: 6.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1425
  bin: 2.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 1.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 991
  bin: 1.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1975
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 16743
  bin: 9.75e1
  variant carriers: 244
genotype depth: GenotypeDepth
  all individuals: 1742
  bin: 4.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 3654
  bin: 8.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 1782
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3990
  bin: 7.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 3252
  bin: 9.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 2668
  bin: 5.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
hgvs: p.Cys85Tyr
num of homozygotes: 6
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS

9-116356457-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 116356457
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 116356457
    reference: chr 9
allele count: 32
allele frequency: 2.672367717797969e-4
allele num: 119744
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000487344
  gene symbol: RGS3
  hgvsc: ENST00000487344.1:n.2858-253C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000417994
  ensembl transcript: ENST00000467805
  gene symbol: RGS3
  hgvsc: ENST00000467805.2:c.579-253C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000497435
  gene symbol: RGS3
  hgvsc: ENST00000497435.1:n.34C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363255
  ensembl transcript: ENST00000374140
  gene symbol: RGS3
  hgvsc: ENST00000374140.2:c.3081-253C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363249
  ensembl transcript: ENST00000374134
  gene symbol: RGS3
  hgvsc: ENST00000374134.3:c.1044-253C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000343359
  ensembl transcript: ENST00000342620
  gene symbol: RGS3
  hgvsc: ENST00000342620.5:c.-10-253C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000420356
  ensembl transcript: ENST00000462143
  gene symbol: RGS3
  hgvsc: ENST00000462143.1:c.1044-253C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000436168
  ensembl transcript: ENST00000462403
  gene symbol: RGS3
  hgvsc: ENST00000462403.1:c.258C>T
  hgvsp: ENST00000462403.1:c.258C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000478599
  gene symbol: RGS3
  hgvsc: ENST00000478599.1:n.2925-253C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000496275
  gene symbol: RGS3
  hgvsc: ENST00000496275.1:n.289-253C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000340284
  ensembl transcript: ENST00000343817
  gene symbol: RGS3
  hgvsc: ENST00000343817.5:c.2238-253C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000259406
  ensembl transcript: ENST00000350696
  gene symbol: RGS3
  hgvsc: ENST00000350696.5:c.3081-253C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000378141
  ensembl transcript: ENST00000394646
  gene symbol: RGS3
  hgvsc: ENST00000394646.3:c.1260-253C>T
  variant of: http://identifiers.org/hgnc/9999
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2256
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1357
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1055
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1776
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1745
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4007
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2676
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 16600
  bin: 9.75e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 4031
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3128
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1965
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1894
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2226
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 578
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3702
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Thr86Thr
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: MQ
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum

9-116356458-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 116356458
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 116356458
    reference: chr 9
allele count: 173
allele frequency: 1.444676409185804e-3
allele num: 119750
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363255
  ensembl transcript: ENST00000374140
  gene symbol: RGS3
  hgvsc: ENST00000374140.2:c.3081-252G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363249
  ensembl transcript: ENST00000374134
  gene symbol: RGS3
  hgvsc: ENST00000374134.3:c.1044-252G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000478599
  gene symbol: RGS3
  hgvsc: ENST00000478599.1:n.2925-252G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000417994
  ensembl transcript: ENST00000467805
  gene symbol: RGS3
  hgvsc: ENST00000467805.2:c.579-252G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000436168
  ensembl transcript: ENST00000462403
  gene symbol: RGS3
  hgvsc: ENST00000462403.1:c.259G>A
  hgvsp: ENSP00000436168.1:p.Val87Ile
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000420356
  ensembl transcript: ENST00000462143
  gene symbol: RGS3
  hgvsc: ENST00000462143.1:c.1044-252G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000487344
  gene symbol: RGS3
  hgvsc: ENST00000487344.1:n.2858-252G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000343359
  ensembl transcript: ENST00000342620
  gene symbol: RGS3
  hgvsc: ENST00000342620.5:c.-10-252G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000259406
  ensembl transcript: ENST00000350696
  gene symbol: RGS3
  hgvsc: ENST00000350696.5:c.3081-252G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000340284
  ensembl transcript: ENST00000343817
  gene symbol: RGS3
  hgvsc: ENST00000343817.5:c.2238-252G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000378141
  ensembl transcript: ENST00000394646
  gene symbol: RGS3
  hgvsc: ENST00000394646.3:c.1260-252G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000497435
  gene symbol: RGS3
  hgvsc: ENST00000497435.1:n.35G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000496275
  gene symbol: RGS3
  hgvsc: ENST00000496275.1:n.289-252G>A
  variant of: http://identifiers.org/hgnc/9999
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3129
  bin: 6.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3700
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1355
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2671
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2274
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1746
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1056
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3673
  bin: 8.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2226
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3268
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1889
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4013
  bin: 8.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 4030
  bin: 7.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 1955
  bin: 3.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
hgvs: p.Val87Ile
num of homozygotes: 1
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD

9-116356459-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 116356459
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 116356459
    reference: chr 9
allele count: 1
allele frequency: 8.346548702111677e-6
allele num: 119810
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363249
  ensembl transcript: ENST00000374134
  gene symbol: RGS3
  hgvsc: ENST00000374134.3:c.1044-251T>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000497435
  gene symbol: RGS3
  hgvsc: ENST00000497435.1:n.36T>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363255
  ensembl transcript: ENST00000374140
  gene symbol: RGS3
  hgvsc: ENST00000374140.2:c.3081-251T>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000378141
  ensembl transcript: ENST00000394646
  gene symbol: RGS3
  hgvsc: ENST00000394646.3:c.1260-251T>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000496275
  gene symbol: RGS3
  hgvsc: ENST00000496275.1:n.289-251T>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000478599
  gene symbol: RGS3
  hgvsc: ENST00000478599.1:n.2925-251T>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000417994
  ensembl transcript: ENST00000467805
  gene symbol: RGS3
  hgvsc: ENST00000467805.2:c.579-251T>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000436168
  ensembl transcript: ENST00000462403
  gene symbol: RGS3
  hgvsc: ENST00000462403.1:c.260T>C
  hgvsp: ENSP00000436168.1:p.Val87Ala
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000487344
  gene symbol: RGS3
  hgvsc: ENST00000487344.1:n.2858-251T>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000340284
  ensembl transcript: ENST00000343817
  gene symbol: RGS3
  hgvsc: ENST00000343817.5:c.2238-251T>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000343359
  ensembl transcript: ENST00000342620
  gene symbol: RGS3
  hgvsc: ENST00000342620.5:c.-10-251T>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000420356
  ensembl transcript: ENST00000462143
  gene symbol: RGS3
  hgvsc: ENST00000462143.1:c.1044-251T>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000259406
  ensembl transcript: ENST00000350696
  gene symbol: RGS3
  hgvsc: ENST00000350696.5:c.3081-251T>C
  variant of: http://identifiers.org/hgnc/9999
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2677
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1363
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2229
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2280
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16523
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3270
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1957
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4017
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1894
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1750
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3676
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4035
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3132
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val87Ala
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: T
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: QD

9-116356465-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 116356465
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 116356465
    reference: chr 9
allele count: 1
allele frequency: 8.354916868577158e-6
allele num: 119690
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000378141
  ensembl transcript: ENST00000394646
  gene symbol: RGS3
  hgvsc: ENST00000394646.3:c.1260-245C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363249
  ensembl transcript: ENST00000374134
  gene symbol: RGS3
  hgvsc: ENST00000374134.3:c.1044-245C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000259406
  ensembl transcript: ENST00000350696
  gene symbol: RGS3
  hgvsc: ENST00000350696.5:c.3081-245C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000496275
  gene symbol: RGS3
  hgvsc: ENST00000496275.1:n.289-245C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000487344
  gene symbol: RGS3
  hgvsc: ENST00000487344.1:n.2858-245C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000340284
  ensembl transcript: ENST00000343817
  gene symbol: RGS3
  hgvsc: ENST00000343817.5:c.2238-245C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363255
  ensembl transcript: ENST00000374140
  gene symbol: RGS3
  hgvsc: ENST00000374140.2:c.3081-245C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000497435
  gene symbol: RGS3
  hgvsc: ENST00000497435.1:n.42C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000436168
  ensembl transcript: ENST00000462403
  gene symbol: RGS3
  hgvsc: ENST00000462403.1:c.266C>T
  hgvsp: ENSP00000436168.1:p.Ala89Val
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000343359
  ensembl transcript: ENST00000342620
  gene symbol: RGS3
  hgvsc: ENST00000342620.5:c.-10-245C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000420356
  ensembl transcript: ENST00000462143
  gene symbol: RGS3
  hgvsc: ENST00000462143.1:c.1044-245C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000478599
  gene symbol: RGS3
  hgvsc: ENST00000478599.1:n.2925-245C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000417994
  ensembl transcript: ENST00000467805
  gene symbol: RGS3
  hgvsc: ENST00000467805.2:c.579-245C>T
  variant of: http://identifiers.org/hgnc/9999
canonical: false
consequence: missense
filter: VQSRTrancheINDEL96.00to97.00
genotype depth: GenotypeDepth
  all individuals: 1892
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2677
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4017
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1108
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 556
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3717
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2227
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1926
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1776
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2217
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16523
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1744
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3132
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3270
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1371
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala89Val
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum

9-116356465-CCCGCTGCCCAGGA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 116356465
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 116356452
    reference: chr 9
allele count: 3
allele frequency: 2.506475060573147e-5
allele num: 119690
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000343359
  ensembl transcript: ENST00000342620
  gene symbol: RGS3
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000417994
  ensembl transcript: ENST00000467805
  gene symbol: RGS3
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000340284
  ensembl transcript: ENST00000343817
  gene symbol: RGS3
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000496275
  gene symbol: RGS3
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000420356
  ensembl transcript: ENST00000462143
  gene symbol: RGS3
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363249
  ensembl transcript: ENST00000374134
  gene symbol: RGS3
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000436168
  ensembl transcript: ENST00000462403
  gene symbol: RGS3
  hgvsp: ENSP00000436168.1:p.Arg90AlafsTer45
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000497435
  gene symbol: RGS3
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363255
  ensembl transcript: ENST00000374140
  gene symbol: RGS3
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000478599
  gene symbol: RGS3
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000259406
  ensembl transcript: ENST00000350696
  gene symbol: RGS3
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000378141
  ensembl transcript: ENST00000394646
  gene symbol: RGS3
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000487344
  gene symbol: RGS3
  variant of: http://identifiers.org/hgnc/9999
canonical: false
consequence: frameshift
filter: VQSRTrancheINDEL96.00to97.00
genotype depth: GenotypeDepth
  all individuals: 1371
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2677
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3676
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3717
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4035
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1776
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4016
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1892
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1744
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2217
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 556
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1108
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1926
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3270
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2227
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3132
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16523
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4017
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg90AlafsTer45
num of homozygotes: 0
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: East Asian
reference allele: CCCGCTGCCCAGGA
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD

9-116356467-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 116356467
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 116356467
    reference: chr 9
allele count: 125
allele frequency: 1.04474867525868e-3
allele num: 119646
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000436168
  ensembl transcript: ENST00000462403
  gene symbol: RGS3
  hgvsc: ENST00000462403.1:c.268C>T
  hgvsp: ENSP00000436168.1:p.Arg90Cys
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363255
  ensembl transcript: ENST00000374140
  gene symbol: RGS3
  hgvsc: ENST00000374140.2:c.3081-243C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000420356
  ensembl transcript: ENST00000462143
  gene symbol: RGS3
  hgvsc: ENST00000462143.1:c.1044-243C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000259406
  ensembl transcript: ENST00000350696
  gene symbol: RGS3
  hgvsc: ENST00000350696.5:c.3081-243C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000417994
  ensembl transcript: ENST00000467805
  gene symbol: RGS3
  hgvsc: ENST00000467805.2:c.579-243C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000340284
  ensembl transcript: ENST00000343817
  gene symbol: RGS3
  hgvsc: ENST00000343817.5:c.2238-243C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000343359
  ensembl transcript: ENST00000342620
  gene symbol: RGS3
  hgvsc: ENST00000342620.5:c.-10-243C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363249
  ensembl transcript: ENST00000374134
  gene symbol: RGS3
  hgvsc: ENST00000374134.3:c.1044-243C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000497435
  gene symbol: RGS3
  hgvsc: ENST00000497435.1:n.44C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000496275
  gene symbol: RGS3
  hgvsc: ENST00000496275.1:n.289-243C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000478599
  gene symbol: RGS3
  hgvsc: ENST00000478599.1:n.2925-243C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000487344
  gene symbol: RGS3
  hgvsc: ENST00000487344.1:n.2858-243C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000378141
  ensembl transcript: ENST00000394646
  gene symbol: RGS3
  hgvsc: ENST00000394646.3:c.1260-243C>T
  variant of: http://identifiers.org/hgnc/9999
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3131
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3676
  bin: 8.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 4035
  bin: 7.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1361
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3718
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1747
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2232
  bin: 5.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 1.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2205
  bin: 2.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 4019
  bin: 8.25e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 1909
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1112
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1888
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 699
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4014
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1765
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Arg90Cys
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum

9-116356468-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 116356468
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 116356468
    reference: chr 9
allele count: 3
allele frequency: 2.507983748265311e-5
allele num: 119618
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000340284
  ensembl transcript: ENST00000343817
  gene symbol: RGS3
  hgvsc: ENST00000343817.5:c.2238-242G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000343359
  ensembl transcript: ENST00000342620
  gene symbol: RGS3
  hgvsc: ENST00000342620.5:c.-10-242G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000497435
  gene symbol: RGS3
  hgvsc: ENST00000497435.1:n.45G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000420356
  ensembl transcript: ENST00000462143
  gene symbol: RGS3
  hgvsc: ENST00000462143.1:c.1044-242G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000478599
  gene symbol: RGS3
  hgvsc: ENST00000478599.1:n.2925-242G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363249
  ensembl transcript: ENST00000374134
  gene symbol: RGS3
  hgvsc: ENST00000374134.3:c.1044-242G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000487344
  gene symbol: RGS3
  hgvsc: ENST00000487344.1:n.2858-242G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363255
  ensembl transcript: ENST00000374140
  gene symbol: RGS3
  hgvsc: ENST00000374140.2:c.3081-242G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000259406
  ensembl transcript: ENST00000350696
  gene symbol: RGS3
  hgvsc: ENST00000350696.5:c.3081-242G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000417994
  ensembl transcript: ENST00000467805
  gene symbol: RGS3
  hgvsc: ENST00000467805.2:c.579-242G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000436168
  ensembl transcript: ENST00000462403
  gene symbol: RGS3
  hgvsc: ENST00000462403.1:c.269G>A
  hgvsp: ENSP00000436168.1:p.Arg90His
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000378141
  ensembl transcript: ENST00000394646
  gene symbol: RGS3
  hgvsc: ENST00000394646.3:c.1260-242G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000496275
  gene symbol: RGS3
  hgvsc: ENST00000496275.1:n.289-242G>A
  variant of: http://identifiers.org/hgnc/9999
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1362
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1893
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2231
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3136
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 704
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1747
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1124
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4025
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16476
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2686
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1771
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4042
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3274
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2195
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1893
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg90His
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum

9-116356475-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 116356475
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 116356475
    reference: chr 9
allele count: 6
allele frequency: 5.021592849251783e-5
allele num: 119484
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000487344
  gene symbol: RGS3
  hgvsc: ENST00000487344.1:n.2858-235A>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000343359
  ensembl transcript: ENST00000342620
  gene symbol: RGS3
  hgvsc: ENST00000342620.5:c.-10-235A>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000478599
  gene symbol: RGS3
  hgvsc: ENST00000478599.1:n.2925-235A>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000420356
  ensembl transcript: ENST00000462143
  gene symbol: RGS3
  hgvsc: ENST00000462143.1:c.1044-235A>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000340284
  ensembl transcript: ENST00000343817
  gene symbol: RGS3
  hgvsc: ENST00000343817.5:c.2238-235A>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000497435
  gene symbol: RGS3
  hgvsc: ENST00000497435.1:n.52A>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000259406
  ensembl transcript: ENST00000350696
  gene symbol: RGS3
  hgvsc: ENST00000350696.5:c.3081-235A>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363249
  ensembl transcript: ENST00000374134
  gene symbol: RGS3
  hgvsc: ENST00000374134.3:c.1044-235A>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363255
  ensembl transcript: ENST00000374140
  gene symbol: RGS3
  hgvsc: ENST00000374140.2:c.3081-235A>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000436168
  ensembl transcript: ENST00000462403
  gene symbol: RGS3
  hgvsc: ENST00000462403.1:c.276A>G
  hgvsp: ENST00000462403.1:c.276A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000496275
  gene symbol: RGS3
  hgvsc: ENST00000496275.1:n.289-235A>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000417994
  ensembl transcript: ENST00000467805
  gene symbol: RGS3
  hgvsc: ENST00000467805.2:c.579-235A>G
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000378141
  ensembl transcript: ENST00000394646
  gene symbol: RGS3
  hgvsc: ENST00000394646.3:c.1260-235A>G
  variant of: http://identifiers.org/hgnc/9999
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1891
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16474
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3275
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1734
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1847
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4025
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3136
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2100
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1312
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1158
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3671
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 747
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2686
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4014
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2231
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Pro92Pro
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
population: East Asian
population: Latino
reference allele: A
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: DP

http://identifiers.org/exac.variant/9-116356479-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 116356479
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 116356479
    reference: chr 9
allele count: 32
allele frequency: 2.678182852934284e-4
allele num: 119484
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000487344
  gene symbol: RGS3
  hgvsc: ENST00000487344.1:n.2858-231C>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000497435
  gene symbol: RGS3
  hgvsc: ENST00000497435.1:n.56C>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000478599
  gene symbol: RGS3
  hgvsc: ENST00000478599.1:n.2925-231C>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363249
  ensembl transcript: ENST00000374134
  gene symbol: RGS3
  hgvsc: ENST00000374134.3:c.1044-231C>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000436168
  ensembl transcript: ENST00000462403
  gene symbol: RGS3
  hgvsc: ENST00000462403.1:c.280C>A
  hgvsp: ENSP00000436168.1:p.Arg94Ser
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000340284
  ensembl transcript: ENST00000343817
  gene symbol: RGS3
  hgvsc: ENST00000343817.5:c.2238-231C>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000420356
  ensembl transcript: ENST00000462143
  gene symbol: RGS3
  hgvsc: ENST00000462143.1:c.1044-231C>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000378141
  ensembl transcript: ENST00000394646
  gene symbol: RGS3
  hgvsc: ENST00000394646.3:c.1260-231C>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000343359
  ensembl transcript: ENST00000342620
  gene symbol: RGS3
  hgvsc: ENST00000342620.5:c.-10-231C>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000259406
  ensembl transcript: ENST00000350696
  gene symbol: RGS3
  hgvsc: ENST00000350696.5:c.3081-231C>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000496275
  gene symbol: RGS3
  hgvsc: ENST00000496275.1:n.289-231C>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000417994
  ensembl transcript: ENST00000467805
  gene symbol: RGS3
  hgvsc: ENST00000467805.2:c.579-231C>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363255
  ensembl transcript: ENST00000374140
  gene symbol: RGS3
  hgvsc: ENST00000374140.2:c.3081-231C>A
  variant of: http://identifiers.org/hgnc/9999
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1752
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4016
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1891
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3673
  bin: 8.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1303
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3720
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4045
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3275
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 758
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1832
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1734
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2058
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1173
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4023
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3136
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg94Ser
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
population: East Asian
population: African
population: Latino
reference allele: C
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP

9-116356479-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 116356479
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 116356479
    reference: chr 9
allele count: 1
allele frequency: 8.369321415419637e-6
allele num: 119484
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363255
  ensembl transcript: ENST00000374140
  gene symbol: RGS3
  hgvsc: ENST00000374140.2:c.3081-231C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363249
  ensembl transcript: ENST00000374134
  gene symbol: RGS3
  hgvsc: ENST00000374134.3:c.1044-231C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000436168
  ensembl transcript: ENST00000462403
  gene symbol: RGS3
  hgvsc: ENST00000462403.1:c.280C>T
  hgvsp: ENSP00000436168.1:p.Arg94Cys
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000487344
  gene symbol: RGS3
  hgvsc: ENST00000487344.1:n.2858-231C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000496275
  gene symbol: RGS3
  hgvsc: ENST00000496275.1:n.289-231C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000497435
  gene symbol: RGS3
  hgvsc: ENST00000497435.1:n.56C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000340284
  ensembl transcript: ENST00000343817
  gene symbol: RGS3
  hgvsc: ENST00000343817.5:c.2238-231C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000378141
  ensembl transcript: ENST00000394646
  gene symbol: RGS3
  hgvsc: ENST00000394646.3:c.1260-231C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000259406
  ensembl transcript: ENST00000350696
  gene symbol: RGS3
  hgvsc: ENST00000350696.5:c.3081-231C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000417994
  ensembl transcript: ENST00000467805
  gene symbol: RGS3
  hgvsc: ENST00000467805.2:c.579-231C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000478599
  gene symbol: RGS3
  hgvsc: ENST00000478599.1:n.2925-231C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000343359
  ensembl transcript: ENST00000342620
  gene symbol: RGS3
  hgvsc: ENST00000342620.5:c.-10-231C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000420356
  ensembl transcript: ENST00000462143
  gene symbol: RGS3
  hgvsc: ENST00000462143.1:c.1044-231C>T
  variant of: http://identifiers.org/hgnc/9999
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2230
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4016
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1832
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2058
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1752
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4023
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3275
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 758
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1173
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3720
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1303
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1891
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16471
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2686
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1734
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg94Cys
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum

9-116356480-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 116356480
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 116356480
    reference: chr 9
allele count: 2
allele frequency: 1.673864283083927e-5
allele num: 119484
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000487344
  gene symbol: RGS3
  hgvsc: ENST00000487344.1:n.2858-230G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363255
  ensembl transcript: ENST00000374140
  gene symbol: RGS3
  hgvsc: ENST00000374140.2:c.3081-230G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000417994
  ensembl transcript: ENST00000467805
  gene symbol: RGS3
  hgvsc: ENST00000467805.2:c.579-230G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000436168
  ensembl transcript: ENST00000462403
  gene symbol: RGS3
  hgvsc: ENST00000462403.1:c.281G>A
  hgvsp: ENSP00000436168.1:p.Arg94His
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000259406
  ensembl transcript: ENST00000350696
  gene symbol: RGS3
  hgvsc: ENST00000350696.5:c.3081-230G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000478599
  gene symbol: RGS3
  hgvsc: ENST00000478599.1:n.2925-230G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000497435
  gene symbol: RGS3
  hgvsc: ENST00000497435.1:n.57G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000378141
  ensembl transcript: ENST00000394646
  gene symbol: RGS3
  hgvsc: ENST00000394646.3:c.1260-230G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000343359
  ensembl transcript: ENST00000342620
  gene symbol: RGS3
  hgvsc: ENST00000342620.5:c.-10-230G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000340284
  ensembl transcript: ENST00000343817
  gene symbol: RGS3
  hgvsc: ENST00000343817.5:c.2238-230G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363249
  ensembl transcript: ENST00000374134
  gene symbol: RGS3
  hgvsc: ENST00000374134.3:c.1044-230G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000420356
  ensembl transcript: ENST00000462143
  gene symbol: RGS3
  hgvsc: ENST00000462143.1:c.1044-230G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000496275
  gene symbol: RGS3
  hgvsc: ENST00000496275.1:n.289-230G>A
  variant of: http://identifiers.org/hgnc/9999
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2232
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16454
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2685
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4047
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3275
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3140
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1184
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1317
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1734
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2027
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1815
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1753
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4018
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4023
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Arg94His
num of homozygotes: 0
population: Other
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum

9-116356481-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 116356481
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 116356481
    reference: chr 9
allele count: 21
allele frequency: 1.757734029730816e-4
allele num: 119472
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000340284
  ensembl transcript: ENST00000343817
  gene symbol: RGS3
  hgvsc: ENST00000343817.5:c.2238-229C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000496275
  gene symbol: RGS3
  hgvsc: ENST00000496275.1:n.289-229C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363249
  ensembl transcript: ENST00000374134
  gene symbol: RGS3
  hgvsc: ENST00000374134.3:c.1044-229C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000478599
  gene symbol: RGS3
  hgvsc: ENST00000478599.1:n.2925-229C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000497435
  gene symbol: RGS3
  hgvsc: ENST00000497435.1:n.58C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000487344
  gene symbol: RGS3
  hgvsc: ENST00000487344.1:n.2858-229C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000343359
  ensembl transcript: ENST00000342620
  gene symbol: RGS3
  hgvsc: ENST00000342620.5:c.-10-229C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000420356
  ensembl transcript: ENST00000462143
  gene symbol: RGS3
  hgvsc: ENST00000462143.1:c.1044-229C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000259406
  ensembl transcript: ENST00000350696
  gene symbol: RGS3
  hgvsc: ENST00000350696.5:c.3081-229C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000436168
  ensembl transcript: ENST00000462403
  gene symbol: RGS3
  hgvsc: ENST00000462403.1:c.282C>T
  hgvsp: ENST00000462403.1:c.282C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363255
  ensembl transcript: ENST00000374140
  gene symbol: RGS3
  hgvsc: ENST00000374140.2:c.3081-229C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000417994
  ensembl transcript: ENST00000467805
  gene symbol: RGS3
  hgvsc: ENST00000467805.2:c.579-229C>T
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000378141
  ensembl transcript: ENST00000394646
  gene symbol: RGS3
  hgvsc: ENST00000394646.3:c.1260-229C>T
  variant of: http://identifiers.org/hgnc/9999
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3725
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1804
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2026
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 763
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16453
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1893
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1189
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1755
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1732
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1337
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3276
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4019
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4023
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2685
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2230
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Arg94Arg
num of homozygotes: 1
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum

9-116356482-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 116356482
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 116356482
    reference: chr 9
allele count: 4
allele frequency: 3.347840642785403e-5
allele num: 119480
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000340284
  ensembl transcript: ENST00000343817
  gene symbol: RGS3
  hgvsc: ENST00000343817.5:c.2238-228G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000497435
  gene symbol: RGS3
  hgvsc: ENST00000497435.1:n.59G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000378141
  ensembl transcript: ENST00000394646
  gene symbol: RGS3
  hgvsc: ENST00000394646.3:c.1260-228G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000478599
  gene symbol: RGS3
  hgvsc: ENST00000478599.1:n.2925-228G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000343359
  ensembl transcript: ENST00000342620
  gene symbol: RGS3
  hgvsc: ENST00000342620.5:c.-10-228G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363255
  ensembl transcript: ENST00000374140
  gene symbol: RGS3
  hgvsc: ENST00000374140.2:c.3081-228G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000496275
  gene symbol: RGS3
  hgvsc: ENST00000496275.1:n.289-228G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000420356
  ensembl transcript: ENST00000462143
  gene symbol: RGS3
  hgvsc: ENST00000462143.1:c.1044-228G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000436168
  ensembl transcript: ENST00000462403
  gene symbol: RGS3
  hgvsc: ENST00000462403.1:c.283G>A
  hgvsp: ENSP00000436168.1:p.Gly95Arg
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363249
  ensembl transcript: ENST00000374134
  gene symbol: RGS3
  hgvsc: ENST00000374134.3:c.1044-228G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000487344
  gene symbol: RGS3
  hgvsc: ENST00000487344.1:n.2858-228G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000259406
  ensembl transcript: ENST00000350696
  gene symbol: RGS3
  hgvsc: ENST00000350696.5:c.3081-228G>A
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000417994
  ensembl transcript: ENST00000467805
  gene symbol: RGS3
  hgvsc: ENST00000467805.2:c.579-228G>A
  variant of: http://identifiers.org/hgnc/9999
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 767
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1344
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1182
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 760
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3671
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1734
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3725
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4019
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1800
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2684
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16448
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1752
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3147
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3274
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2034
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1894
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly95Arg
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: DP

9-116356484-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 116356484
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 116356484
    reference: chr 9
allele count: 2
allele frequency: 1.673584147810952e-5
allele num: 119504
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000478599
  gene symbol: RGS3
  hgvsc: ENST00000478599.1:n.2925-226G>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363249
  ensembl transcript: ENST00000374134
  gene symbol: RGS3
  hgvsc: ENST00000374134.3:c.1044-226G>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363255
  ensembl transcript: ENST00000374140
  gene symbol: RGS3
  hgvsc: ENST00000374140.2:c.3081-226G>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000259406
  ensembl transcript: ENST00000350696
  gene symbol: RGS3
  hgvsc: ENST00000350696.5:c.3081-226G>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000343359
  ensembl transcript: ENST00000342620
  gene symbol: RGS3
  hgvsc: ENST00000342620.5:c.-10-226G>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000420356
  ensembl transcript: ENST00000462143
  gene symbol: RGS3
  hgvsc: ENST00000462143.1:c.1044-226G>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000417994
  ensembl transcript: ENST00000467805
  gene symbol: RGS3
  hgvsc: ENST00000467805.2:c.579-226G>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000497435
  gene symbol: RGS3
  hgvsc: ENST00000497435.1:n.61G>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000436168
  ensembl transcript: ENST00000462403
  gene symbol: RGS3
  hgvsc: ENST00000462403.1:c.285G>C
  hgvsp: ENST00000462403.1:c.285G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000487344
  gene symbol: RGS3
  hgvsc: ENST00000487344.1:n.2858-226G>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000340284
  ensembl transcript: ENST00000343817
  gene symbol: RGS3
  hgvsc: ENST00000343817.5:c.2238-226G>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000496275
  gene symbol: RGS3
  hgvsc: ENST00000496275.1:n.289-226G>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000378141
  ensembl transcript: ENST00000394646
  gene symbol: RGS3
  hgvsc: ENST00000394646.3:c.1260-226G>C
  variant of: http://identifiers.org/hgnc/9999
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4022
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2230
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1188
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1749
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3145
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3274
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16447
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3670
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1385
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1731
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2690
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4018
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4045
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2015
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 769
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly95Gly
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
reference allele: G
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum

9-116356487-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 116356487
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 116356487
    reference: chr 9
allele count: 1
allele frequency: 8.368340892734607e-6
allele num: 119498
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000497435
  gene symbol: RGS3
  hgvsc: ENST00000497435.1:n.64G>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000487344
  gene symbol: RGS3
  hgvsc: ENST00000487344.1:n.2858-223G>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000343359
  ensembl transcript: ENST00000342620
  gene symbol: RGS3
  hgvsc: ENST00000342620.5:c.-10-223G>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000436168
  ensembl transcript: ENST00000462403
  gene symbol: RGS3
  hgvsc: ENST00000462403.1:c.288G>C
  hgvsp: ENST00000462403.1:c.288G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000478599
  gene symbol: RGS3
  hgvsc: ENST00000478599.1:n.2925-223G>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000259406
  ensembl transcript: ENST00000350696
  gene symbol: RGS3
  hgvsc: ENST00000350696.5:c.3081-223G>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000417994
  ensembl transcript: ENST00000467805
  gene symbol: RGS3
  hgvsc: ENST00000467805.2:c.579-223G>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363255
  ensembl transcript: ENST00000374140
  gene symbol: RGS3
  hgvsc: ENST00000374140.2:c.3081-223G>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000420356
  ensembl transcript: ENST00000462143
  gene symbol: RGS3
  hgvsc: ENST00000462143.1:c.1044-223G>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000340284
  ensembl transcript: ENST00000343817
  gene symbol: RGS3
  hgvsc: ENST00000343817.5:c.2238-223G>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000363249
  ensembl transcript: ENST00000374134
  gene symbol: RGS3
  hgvsc: ENST00000374134.3:c.1044-223G>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl protein: ENSP00000378141
  ensembl transcript: ENST00000394646
  gene symbol: RGS3
  hgvsc: ENST00000394646.3:c.1260-223G>C
  variant of: http://identifiers.org/hgnc/9999
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000138835
  ensembl transcript: ENST00000496275
  gene symbol: RGS3
  hgvsc: ENST00000496275.1:n.289-223G>C
  variant of: http://identifiers.org/hgnc/9999
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4021
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1442
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3670
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1731
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2690
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1891
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1172
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2231
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1993
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Val96Val
num of homozygotes: 0
reference allele: G

GenotypeDepth
all individuals: 1746
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1352
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5537
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 362
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 46982
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 828
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1682
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 145
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 979
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 790
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 689
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 923
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8590
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64452
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9630
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.75e0

VQSLOD
type: SiteQuality
SIO_000300: -1.75e0

MQ
type: SiteQuality
SIO_000300: 5.662e1

FS
type: SiteQuality
SIO_000300: 3.136e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 5.5e-1

DP
type: SiteQuality
SIO_000300: 3.615974e6

QD
type: SiteQuality
SIO_000300: 9.5e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.754e0

MQRankSum
type: SiteQuality
SIO_000300: 1.75e0

GenotypeDepth
all individuals: 4352
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5505
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 981
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 833
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 363
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 150
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1266
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46982
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 145
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 927
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1689
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 688
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 789
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9632
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8592
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.102699348433137e-5
allele num: 64460
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 4.54e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.2e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.284e0

VQSLOD
type: SiteQuality
SIO_000300: 2.77e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.32e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

MQ
type: SiteQuality
SIO_000300: 5.975e1

QD
type: SiteQuality
SIO_000300: 1.304e1

DP
type: SiteQuality
SIO_000300: 3.616691e6

GenotypeDepth
all individuals: 5503
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 980
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46982
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1281
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 789
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5526
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 358
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 141
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1690
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 926
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 834
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 688
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.058403004967891e-5
allele num: 16506
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8594
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64474
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9632
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 3.53e0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.014e0

MQ
type: SiteQuality
SIO_000300: 5.935e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.43e-1

FS
type: SiteQuality
SIO_000300: 1.024e0

QD
type: SiteQuality
SIO_000300: 1.156e1

VQSLOD
type: SiteQuality
SIO_000300: -2.791e0

DP
type: SiteQuality
SIO_000300: 3.61687e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.29e0

GenotypeDepth
all individuals: 4340
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 138
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 339
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 834
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 689
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 987
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1316
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 927
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5580
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46983
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1700
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 788
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.550291454793501e-5
allele num: 64504
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9664
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 9.507999999999999e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.77e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.28e-1

DP
type: SiteQuality
SIO_000300: 3.617709e6

BaseQRankSum
type: SiteQuality
SIO_000300: 3.73e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 4.09e-1

MQ
type: SiteQuality
SIO_000300: 5.944e1

QD
type: SiteQuality
SIO_000300: 1.13e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.9e-2

GenotypeDepth
all individuals: 5502
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46984
bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 99
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 689
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 984
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 788
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 340
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1702
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 836
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1293
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5548
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 925
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 8
allele frequency: 6.925207756232687e-4
allele num: 11552
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9662
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64516
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.17e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.67e0

DP
type: SiteQuality
SIO_000300: 3.620907e6

QD
type: SiteQuality
SIO_000300: 1.271e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.74e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-3

MQ
type: SiteQuality
SIO_000300: 5.937e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.850000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.69e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeDepth
all individuals: 1745
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 836
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 340
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5548
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1702
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1293
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 689
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 925
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 984
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46984
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 788
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9662
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.3000186000372e-5
allele num: 64516
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.69e-1

QD
type: SiteQuality
SIO_000300: 1.271e1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.17e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.74e0

VQSLOD
type: SiteQuality
SIO_000300: 4.67e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.850000000000001e-1

MQ
type: SiteQuality
SIO_000300: 5.937e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-3

DP
type: SiteQuality
SIO_000300: 3.620907e6

GenotypeDepth
all individuals: 2455
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 329
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5543
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 688
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 986
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1706
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1275
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 926
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 789
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 836
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 141
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46985
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 52
bin: 3.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64526
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9670
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.68e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.2e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.06e0

FS
type: SiteQuality
SIO_000300: 2.45e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.081e0

QD
type: SiteQuality
SIO_000300: 1.219e1

MQ
type: SiteQuality
SIO_000300: 5.948e1

DP
type: SiteQuality
SIO_000300: 3.620014e6

MQRankSum
type: SiteQuality
SIO_000300: 6.96e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.07e-1

GenotypeDepth
all individuals: 4874
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 141
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1706
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 789
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 329
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 46985
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 105
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 926
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 836
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1275
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5543
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 688
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 986
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.656509695290859e-5
allele num: 11552
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9670
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64526
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.96e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.081e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.06e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.2e-3

MQ
type: SiteQuality
SIO_000300: 5.948e1

DP
type: SiteQuality
SIO_000300: 3.620014e6

FS
type: SiteQuality
SIO_000300: 2.45e0

QD
type: SiteQuality
SIO_000300: 1.219e1

VQSLOD
type: SiteQuality
SIO_000300: 6.07e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.68e-1

GenotypeDepth
all individuals: 4350
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 789
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5538
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 926
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1275
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 987
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 688
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 320
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1703
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 835
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46984
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 124
bin: 3.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.325040688212044e-4
allele num: 8602
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9674
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64532
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

FS
type: SiteQuality
SIO_000300: 1.754e0

VQSLOD
type: SiteQuality
SIO_000300: 7.7e-1

MQ
type: SiteQuality
SIO_000300: 5.955e1

DP
type: SiteQuality
SIO_000300: 3.620486e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.4e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.733e0

MQRankSum
type: SiteQuality
SIO_000300: 9.09e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.47e-1

QD
type: SiteQuality
SIO_000300: 1.051e1

GenotypeDepth
all individuals: 4072
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 34
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 309
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1716
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 925
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1267
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46984
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 789
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 987
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 688
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5538
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 837
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.54933068914229e-5
allele num: 64544
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9678
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.931e1

VQSLOD
type: SiteQuality
SIO_000300: -3.464e-1

FS
type: SiteQuality
SIO_000300: 1.763e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.32e-1

DP
type: SiteQuality
SIO_000300: 3.62066e6

MQRankSum
type: SiteQuality
SIO_000300: 3.06e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 2.31e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.99e-1

QD
type: SiteQuality
SIO_000300: 2.99e0

GenotypeDepth
all individuals: 4333
bin: 7.75e1
variant carriers: 2

GenotypeQuality
all individuals: 915
bin: 8.25e1
variant carriers: 2

GenotypeQuality
all individuals: 44
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 156
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 298
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 123
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 24
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1696
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5472
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 833
bin: 7.25e1
variant carriers: 3

GenotypeQuality
all individuals: 14
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 127
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1197
bin: 2.25e1
variant carriers: 2

GenotypeQuality
all individuals: 982
bin: 7.75e1
variant carriers: 3

GenotypeQuality
all individuals: 47100
bin: 9.75e1
variant carriers: 471

GenotypeQuality
all individuals: 48
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 782
bin: 9.25e1
variant carriers: 2

GenotypeQuality
all individuals: 686
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.817080557238038e-4
allele num: 16510
num of homozygotes: 1

Latino
type: Population
allele count: 18
allele frequency: 1.558441558441558e-3
allele num: 11550
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 14
allele frequency: 2.168391053838052e-4
allele num: 64564
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 2.252252252252252e-3
allele num: 888
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 442
allele frequency: 4.559521353414484e-2
allele num: 9694
num of homozygotes: 13

MQRankSum
type: SiteQuality
SIO_000300: 3.5e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.08e-2

MQ
type: SiteQuality
SIO_000300: 5.957e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.01e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 3.704998e6

ClippingRankSum
type: SiteQuality
SIO_000300: -5.06e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.590000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.31e0

QD
type: SiteQuality
SIO_000300: 1.336e1

GenotypeDepth
all individuals: 2592
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5496
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 986
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 688
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 915
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 159
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1222
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 297
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1701
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47026
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 836
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 781
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9694
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.741615830056049e-5
allele num: 64586
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.25e1

FS
type: SiteQuality
SIO_000300: 5.26e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.1e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.46e0

MQRankSum
type: SiteQuality
SIO_000300: 7.32e-1

DP
type: SiteQuality
SIO_000300: 3.658007e6

MQ
type: SiteQuality
SIO_000300: 5.924e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.41e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.97e-1

GenotypeDepth
all individuals: 4336
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1707
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 988
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 303
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 688
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1235
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5492
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 782
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 918
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47026
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 837
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 1.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64592
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 4.12796697626419e-4
allele num: 9690
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.01e-1

QD
type: SiteQuality
SIO_000300: 1.205e1

DP
type: SiteQuality
SIO_000300: 3.658226e6

VQSLOD
type: SiteQuality
SIO_000300: 1.72e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.4e-3

MQ
type: SiteQuality
SIO_000300: 5.942e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.79e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.08e-1

FS
type: SiteQuality
SIO_000300: 5.28e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.687e0

GenotypeDepth
all individuals: 5592
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47024
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 688
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 155
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 919
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 991
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 783
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1716
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 257
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1254
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 836
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5539
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 3.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9730
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.16144018583043e-4
allele num: 8610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64742
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.659687e6

QD
type: SiteQuality
SIO_000300: 1.302e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

MQRankSum
type: SiteQuality
SIO_000300: 5.2e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.97e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.84e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.8e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.08e0

FS
type: SiteQuality
SIO_000300: 2.901e0

MQ
type: SiteQuality
SIO_000300: 5.924e1

GenotypeDepth
all individuals: 4336
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 840
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 144
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 691
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 920
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5636
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1298
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1723
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 178
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 783
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47024
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1002
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.540927021696253e-5
allele num: 64896
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9792
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.946e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.123e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.9e0

FS
type: SiteQuality
SIO_000300: 1.138e0

VQSLOD
type: SiteQuality
SIO_000300: -4.029e-1

DP
type: SiteQuality
SIO_000300: 3.661816e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.83e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

QD
type: SiteQuality
SIO_000300: 7.92e0

MQRankSum
type: SiteQuality
SIO_000300: 9.350000000000001e-1

GenotypeDepth
all individuals: 4304
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47017
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 68
bin: 4.75e1
variant carriers: 2

GenotypeQuality
all individuals: 90
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 196
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 902
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 219
bin: 7.5e0
variant carriers: 3

GenotypeQuality
all individuals: 182
bin: 2.75e1
variant carriers: 2

GenotypeQuality
all individuals: 5428
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1150
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 690
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 978
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 780
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 814
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 164
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1664
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 3
allele frequency: 2.598302442404296e-4
allele num: 11546
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.063545961678389e-5
allele num: 16492
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.184291898577613e-5
allele num: 64680
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.027115858668858e-4
allele num: 9736
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.4e-1

FS
type: SiteQuality
SIO_000300: 1.804e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.7e-2

QD
type: SiteQuality
SIO_000300: 7.86e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.85e-1

MQ
type: SiteQuality
SIO_000300: 5.98e1

VQSLOD
type: SiteQuality
SIO_000300: 2.26e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.5e-2

DP
type: SiteQuality
SIO_000300: 3.667726e6

GenotypeDepth
all individuals: 5124
bin: 2.25e1
variant carriers: 2

GenotypeQuality
all individuals: 978
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1664
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 196
bin: 2.5e0
variant carriers: 1

GenotypeQuality
all individuals: 68
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 814
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 219
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 182
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 90
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1150
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 780
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 4.25e1
variant carriers: 2

GenotypeQuality
all individuals: 47017
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 61
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 53
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 690
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 902
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5428
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9736
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.063545961678389e-5
allele num: 16492
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.184291898577613e-5
allele num: 64680
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8604
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.121076233183856e-3
allele num: 892
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.85e-1

DP
type: SiteQuality
SIO_000300: 3.667726e6

VQSLOD
type: SiteQuality
SIO_000300: 2.26e0

FS
type: SiteQuality
SIO_000300: 1.804e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

MQRankSum
type: SiteQuality
SIO_000300: 4.4e-1

QD
type: SiteQuality
SIO_000300: 7.86e0

MQ
type: SiteQuality
SIO_000300: 5.98e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.7e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -3.5e-2

GenotypeDepth
all individuals: 5277
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 160
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 793
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 914
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 189
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1169
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 173
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 697
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 824
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 992
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47087
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1689
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5478
bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.541782300339192e-5
allele num: 64860
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9808
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8608
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.325e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.22e-1

FS
type: SiteQuality
SIO_000300: 2.886e0

MQRankSum
type: SiteQuality
SIO_000300: -1.225e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.4e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -4.747e0

MQ
type: SiteQuality
SIO_000300: 5.961e1

VQSLOD
type: SiteQuality
SIO_000300: 3.75e-1

DP
type: SiteQuality
SIO_000300: 3.670525e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.616e0

GenotypeDepth
all individuals: 1750
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1200
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 183
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1715
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 794
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 701
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5503
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 47094
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 180
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1011
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 916
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 828
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 5.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9874
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.609852792034174e-5
allele num: 65078
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 8.76e-1

QD
type: SiteQuality
SIO_000300: 1.4e1

VQSLOD
type: SiteQuality
SIO_000300: 8.65e-1

FS
type: SiteQuality
SIO_000300: 5.38e-1

MQ
type: SiteQuality
SIO_000300: 5.962e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.48e0

DP
type: SiteQuality
SIO_000300: 3.670329e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.76e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.15e0

GenotypeDepth
all individuals: 2234
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5503
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 183
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1200
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 180
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 828
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1011
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47094
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 35
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 916
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 701
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 794
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1715
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65078
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.160631383472609e-4
allele num: 8616
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9874
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.38e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.48e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.15e0

VQSLOD
type: SiteQuality
SIO_000300: 8.65e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.76e-1

DP
type: SiteQuality
SIO_000300: 3.670329e6

MQRankSum
type: SiteQuality
SIO_000300: 8.76e-1

QD
type: SiteQuality
SIO_000300: 1.4e1

MQ
type: SiteQuality
SIO_000300: 5.962e1

GenotypeDepth
all individuals: 2449
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 153
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 702
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 826
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 182
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47094
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1708
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5500
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 182
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1190
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 794
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1010
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 916
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 1.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9870
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.072479798445325e-5
allele num: 65094
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.19e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 2.63e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.09e0

QD
type: SiteQuality
SIO_000300: 1.412e1

FS
type: SiteQuality
SIO_000300: 2.532e0

MQRankSum
type: SiteQuality
SIO_000300: 1.06e0

MQ
type: SiteQuality
SIO_000300: 5.976e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.76e-1

DP
type: SiteQuality
SIO_000300: 3.670488e6

GenotypeDepth
all individuals: 5596
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1708
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 913
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 154
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1167
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 821
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5482
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 178
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 185
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 701
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 794
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1009
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47102
bin: 9.75e1
variant carriers: 5

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65088
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 5
allele frequency: 5.06482982171799e-4
allele num: 9872
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.11e0

MQ
type: SiteQuality
SIO_000300: 5.999e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -6.11e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.67e0

DP
type: SiteQuality
SIO_000300: 3.672501e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.54e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.0e-3

QD
type: SiteQuality
SIO_000300: 1.221e1

GenotypeDepth
all individuals: 4436
bin: 9.75e1
variant carriers: 10

GenotypeQuality
all individuals: 108
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 913
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 154
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 178
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 701
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1708
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1167
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 185
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5482
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1009
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 821
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 794
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47102
bin: 9.75e1
variant carriers: 15

GenotypeQuality
all individuals: 81
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 9
allele frequency: 9.116693679092383e-4
allele num: 9872
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.218289085545723e-5
allele num: 65088
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 1.11e0

VQSLOD
type: SiteQuality
SIO_000300: 4.67e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.0e-3

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

MQ
type: SiteQuality
SIO_000300: 5.999e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.54e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.11e-1

QD
type: SiteQuality
SIO_000300: 1.221e1

DP
type: SiteQuality
SIO_000300: 3.672501e6

GenotypeDepth
all individuals: 3307
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5418
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1122
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 824
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 152
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 701
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1701
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 910
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 187
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47101
bin: 9.75e1
variant carriers: 9

GenotypeQuality
all individuals: 49
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 184
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1005
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 115
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 795
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.012350678274954e-4
allele num: 9878
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.075334890008603e-4
allele num: 65096
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.527e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.64e0

QD
type: SiteQuality
SIO_000300: 1.304e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.96e-1

MQ
type: SiteQuality
SIO_000300: 5.883e1

VQSLOD
type: SiteQuality
SIO_000300: -2.612e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.24e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.6e-1

DP
type: SiteQuality
SIO_000300: 3.673341e6

GenotypeDepth
all individuals: 4847
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1006
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 795
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47102
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 24
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 185
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 701
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 183
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 144
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5483
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1158
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 912
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1703
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 826
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9886
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.069933075458955e-5
allele num: 65148
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.64902266043937e-5
allele num: 11562
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.36e0

FS
type: SiteQuality
SIO_000300: 2.558e0

QD
type: SiteQuality
SIO_000300: 1.067e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.233e0

DP
type: SiteQuality
SIO_000300: 3.673791e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -5.22e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.870000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.043e0

MQ
type: SiteQuality
SIO_000300: 5.957e1

GenotypeDepth
all individuals: 5269
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 187
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1100
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1010
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5415
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47101
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 10
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 701
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 911
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1691
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 825
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 178
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 797
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.534024667116647e-5
allele num: 65188
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9904
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.91e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.36e0

FS
type: SiteQuality
SIO_000300: 1.55e0

VQSLOD
type: SiteQuality
SIO_000300: -3.833e-1

QD
type: SiteQuality
SIO_000300: 9.699999999999999e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.276e0

MQRankSum
type: SiteQuality
SIO_000300: 1.73e0

MQ
type: SiteQuality
SIO_000300: 5.922e1

DP
type: SiteQuality
SIO_000300: 3.674305e6

GenotypeDepth
all individuals: 639
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1123
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47101
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1697
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 701
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 185
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 911
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 825
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1011
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 797
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 176
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5476
bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65198
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9906
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.281e0

VQSLOD
type: SiteQuality
SIO_000300: 5.55e-1

DP
type: SiteQuality
SIO_000300: 3.674398e6

QD
type: SiteQuality
SIO_000300: 1.346e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

MQ
type: SiteQuality
SIO_000300: 5.966e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.172e0

MQRankSum
type: SiteQuality
SIO_000300: -5.610000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.24e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.500000000000001e-2

GenotypeDepth
all individuals: 4337
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 169
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 796
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1701
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47101
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 46
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 913
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1012
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 178
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1131
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5664
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 702
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 828
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.211240310077519e-4
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9922
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65250
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.972e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -1.171e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.46e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.63e0

QD
type: SiteQuality
SIO_000300: 1.152e1

FS
type: SiteQuality
SIO_000300: 1.869e0

VQSLOD
type: SiteQuality
SIO_000300: 1.25e-1

DP
type: SiteQuality
SIO_000300: 3.675802e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.0e-3

GenotypeDepth
all individuals: 5596
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5460
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 195
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 174
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1024
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 150
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 975
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 703
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47103
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 837
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 796
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1688
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 915
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.060162800660995e-5
allele num: 65356
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9948
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.058e0

QD
type: SiteQuality
SIO_000300: 2.55e0

MQ
type: SiteQuality
SIO_000300: 5.907e1

VQSLOD
type: SiteQuality
SIO_000300: -1.687e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.31e-1

FS
type: SiteQuality
SIO_000300: 1.886e0

DP
type: SiteQuality
SIO_000300: 3.676832e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.8e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.59e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.535e0

GenotypeDepth
all individuals: 2448
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 925
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 185
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 795
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 959
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 840
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 704
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1038
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5579
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47106
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1705
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9984
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.528117359413203e-5
allele num: 65440
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 3.678385e6

BaseQRankSum
type: SiteQuality
SIO_000300: 4.47e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.62e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.17e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

MQRankSum
type: SiteQuality
SIO_000300: -2.296e0

VQSLOD
type: SiteQuality
SIO_000300: 1.73e0

MQ
type: SiteQuality
SIO_000300: 5.615e1

QD
type: SiteQuality
SIO_000300: 1.554e1

GenotypeDepth
all individuals: 479
bin: 8.75e1
variant carriers: 289

GenotypeQuality
all individuals: 191
bin: 8.25e1
variant carriers: 109

GenotypeQuality
all individuals: 17
bin: 1.25e1
variant carriers: 14

GenotypeQuality
all individuals: 135
bin: 3.25e1
variant carriers: 114

GenotypeQuality
all individuals: 64
bin: 5.75e1
variant carriers: 60

GenotypeQuality
all individuals: 66
bin: 2.5e0
variant carriers: 5

GenotypeQuality
all individuals: 217
bin: 2.25e1
variant carriers: 95

GenotypeQuality
all individuals: 149
bin: 4.75e1
variant carriers: 140

GenotypeQuality
all individuals: 233
bin: 7.75e1
variant carriers: 120

GenotypeQuality
all individuals: 50
bin: 1.75e1
variant carriers: 48

GenotypeQuality
all individuals: 69
bin: 2.75e1
variant carriers: 49

GenotypeQuality
all individuals: 193
bin: 9.25e1
variant carriers: 115

GenotypeQuality
all individuals: 317
bin: 6.75e1
variant carriers: 116

GenotypeQuality
all individuals: 131
bin: 3.75e1
variant carriers: 123

GenotypeQuality
all individuals: 63
bin: 4.25e1
variant carriers: 55

GenotypeQuality
all individuals: 770
bin: 6.25e1
variant carriers: 126

GenotypeQuality
all individuals: 21
bin: 7.5e0
variant carriers: 8

GenotypeQuality
all individuals: 157
bin: 7.25e1
variant carriers: 76

GenotypeQuality
all individuals: 57597
bin: 9.75e1
variant carriers: 54081

GenotypeQuality
all individuals: 148
bin: 5.25e1
variant carriers: 139

GenotypeQuality
all individuals: 108
bin: 8.75e1
variant carriers: 65

Other
type: Population
allele count: 652
allele frequency: 7.244444444444444e-1
allele num: 900
num of homozygotes: 236

South Asian
type: Population
allele count: 12012
allele frequency: 7.274709302325582e-1
allele num: 16512
num of homozygotes: 4416

Latino
type: Population
allele count: 9888
allele frequency: 8.541810642709053e-1
allele num: 11576
num of homozygotes: 4234

African
type: Population
allele count: 6957
allele frequency: 6.823264025107886e-1
allele num: 10196
num of homozygotes: 2380

European (Finnish)
type: Population
allele count: 4592
allele frequency: 6.947049924357035e-1
allele num: 6610
num of homozygotes: 1610

East Asian
type: Population
allele count: 7521
allele frequency: 8.712928637627433e-1
allele num: 8632
num of homozygotes: 3283

European (Non-Finnish)
type: Population
allele count: 45654
allele frequency: 6.908898305084745e-1
allele num: 66080
num of homozygotes: 15754

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.07e-1

QD
type: SiteQuality
SIO_000300: 2.792e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.5e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.21e-2

MQ
type: SiteQuality
SIO_000300: 5.958e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.07e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.004676e7

VQSLOD
type: SiteQuality
SIO_000300: 4.88e0

MQRankSum
type: SiteQuality
SIO_000300: 1.13e-1

GenotypeDepth
all individuals: 423
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 770
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 317
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 233
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 157
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 57597
bin: 9.75e1
variant carriers: 12

GenotypeQuality
all individuals: 21
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 191
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 193
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 217
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 149
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 3.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 10
allele frequency: 1.513317191283293e-4
allele num: 66080
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.961553550411926e-4
allele num: 10196
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.88e0

MQ
type: SiteQuality
SIO_000300: 5.958e1

QD
type: SiteQuality
SIO_000300: 2.792e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.07e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.13e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.21e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.5e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.07e-1

DP
type: SiteQuality
SIO_000300: 1.004676e7

GenotypeDepth
all individuals: 3044
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 246
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1248
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 781
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 843
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 194
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 160
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 504
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 878
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 655
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3163
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50604
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 55
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 787
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65888
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10126
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.729505361466621e-4
allele num: 11564
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.76e-1

MQRankSum
type: SiteQuality
SIO_000300: -9.7e-2

QD
type: SiteQuality
SIO_000300: 1.623e1

VQSLOD
type: SiteQuality
SIO_000300: -2.191e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.134e0

MQ
type: SiteQuality
SIO_000300: 5.936e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.72e-1

FS
type: SiteQuality
SIO_000300: 1.6433e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.6e-3

DP
type: SiteQuality
SIO_000300: 4.763733e6

GenotypeDepth
all individuals: 1697
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 794
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 118
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 502
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 837
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 875
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 200
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 249
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 651
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1241
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3198
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50605
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 785
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10124
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.518233990222573e-5
allele num: 65866
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.939e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.2e-3

QD
type: SiteQuality
SIO_000300: 2.535e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.79e-1

DP
type: SiteQuality
SIO_000300: 4.763423e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.0e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.96e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.11e-1

VQSLOD
type: SiteQuality
SIO_000300: -9.245e-1

GenotypeDepth
all individuals: 1859
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1207
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 143
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 499
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 196
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 865
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 159
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3033
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 641
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 731
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 195
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 264
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 833
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50602
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 784
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 152
bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.521931026085898e-5
allele num: 65706
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10072
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.841e0

MQRankSum
type: SiteQuality
SIO_000300: -1.78e-1

DP
type: SiteQuality
SIO_000300: 4.761978e6

ClippingRankSum
type: SiteQuality
SIO_000300: -5.97e-1

QD
type: SiteQuality
SIO_000300: 1.386e1

MQ
type: SiteQuality
SIO_000300: 5.981e1

VQSLOD
type: SiteQuality
SIO_000300: 3.5e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.114e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.16e-1

GenotypeDepth
all individuals: 2428
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 784
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 195
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 731
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 143
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1207
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 499
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 641
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 196
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 152
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 264
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 134
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 159
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 833
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 865
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3033
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50602
bin: 9.75e1
variant carriers: 3

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.043862052171795e-5
allele num: 65706
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10072
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.650519031141868e-5
allele num: 11560
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.97e-1

DP
type: SiteQuality
SIO_000300: 4.761978e6

QD
type: SiteQuality
SIO_000300: 1.386e1

MQ
type: SiteQuality
SIO_000300: 5.981e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.114e0

FS
type: SiteQuality
SIO_000300: 1.841e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.16e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.5e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

MQRankSum
type: SiteQuality
SIO_000300: -1.78e-1

GenotypeDepth
all individuals: 17926
bin: 9.75e1
variant carriers: 10

GenotypeQuality
all individuals: 784
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 637
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 498
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 143
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 182
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3111
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 738
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 196
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50659
bin: 9.75e1
variant carriers: 11

GenotypeQuality
all individuals: 832
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 865
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 254
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 145
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1202
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11562
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10064
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 11
allele frequency: 1.674175088274687e-4
allele num: 65704
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.11e-1

FS
type: SiteQuality
SIO_000300: 4.477e0

DP
type: SiteQuality
SIO_000300: 4.761993e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.24e-1

MQ
type: SiteQuality
SIO_000300: 5.957e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.78e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.26e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 3.11e0

VQSLOD
type: SiteQuality
SIO_000300: 9.81e-1

QD
type: SiteQuality
SIO_000300: 1.474e1

GenotypeDepth
all individuals: 3879
bin: 7.25e1
variant carriers: 3

GenotypeQuality
all individuals: 738
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 16
bin: 2.5e0
variant carriers: 1

GenotypeQuality
all individuals: 254
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 784
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 865
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 36
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 182
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3111
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 637
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1202
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 832
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 145
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 196
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 124
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50659
bin: 9.75e1
variant carriers: 386

GenotypeQuality
all individuals: 498
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 143
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 351
allele frequency: 3.487678855325914e-2
allele num: 10064
num of homozygotes: 12

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.511944360447536e-4
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 32
allele frequency: 2.767687251340599e-3
allele num: 11562
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 15
allele frequency: 2.282966029465481e-4
allele num: 65704
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.118568232662192e-3
allele num: 894
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.477e0

MQRankSum
type: SiteQuality
SIO_000300: 3.11e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.78e-1

QD
type: SiteQuality
SIO_000300: 1.474e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.24e-1

VQSLOD
type: SiteQuality
SIO_000300: 9.81e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.11e0

DP
type: SiteQuality
SIO_000300: 4.761993e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.26e-2

MQ
type: SiteQuality
SIO_000300: 5.957e1

GenotypeDepth
all individuals: 3171
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 208
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 108
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 871
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 639
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1215
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 832
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 869
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 154
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3306
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 501
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 789
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50566
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 254
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 5.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056201550387597e-5
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10100
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65810
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.5e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 2.13e0

VQSLOD
type: SiteQuality
SIO_000300: 1.07e0

FS
type: SiteQuality
SIO_000300: 3.532e0

DP
type: SiteQuality
SIO_000300: 4.735191e6

QD
type: SiteQuality
SIO_000300: 1.466e1

MQ
type: SiteQuality
SIO_000300: 5.968e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.56e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.23e0

GenotypeDepth
all individuals: 3609
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 207
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3302
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 40
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 878
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 789
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 500
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 870
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 832
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 255
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1215
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50567
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 638
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10104
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.519710647092794e-5
allele num: 65802
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.947e1

QD
type: SiteQuality
SIO_000300: 1.34e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.037e0

VQSLOD
type: SiteQuality
SIO_000300: 1.98e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.45e0

FS
type: SiteQuality
SIO_000300: 3.605e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.1e0

MQRankSum
type: SiteQuality
SIO_000300: 1.34e0

DP
type: SiteQuality
SIO_000300: 4.735234e6

GenotypeDepth
all individuals: 17690
bin: 9.75e1
variant carriers: 30

GenotypeQuality
all individuals: 56
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 931
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 788
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3468
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 500
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 192
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 875
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1215
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 231
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 635
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 833
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50565
bin: 9.75e1
variant carriers: 30

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65802
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10112
num of homozygotes: 0

Latino
type: Population
allele count: 30
allele frequency: 2.59515570934256e-3
allele num: 11560
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.333e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.06e-1

DP
type: SiteQuality
SIO_000300: 4.73551e6

QD
type: SiteQuality
SIO_000300: 1.474e1

MQRankSum
type: SiteQuality
SIO_000300: 8.599999999999999e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -5.321e0

VQSLOD
type: SiteQuality
SIO_000300: 1.83e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.31e-1

MQ
type: SiteQuality
SIO_000300: 5.951e1

GenotypeDepth
all individuals: 3063
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 184
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 869
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3579
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 832
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 929
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 636
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 197
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 789
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1212
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 499
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50561
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 86
bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.158480074142725e-4
allele num: 8632
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10112
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65806
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.61e-1

MQ
type: SiteQuality
SIO_000300: 5.964e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.83e-1

QD
type: SiteQuality
SIO_000300: 1.937e1

MQRankSum
type: SiteQuality
SIO_000300: 2.32e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.341e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

DP
type: SiteQuality
SIO_000300: 4.733508e6

VQSLOD
type: SiteQuality
SIO_000300: 3.02e0

GenotypeDepth
all individuals: 1771
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 497
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 172
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 166
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 633
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 913
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 48
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 791
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1213
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3656
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 830
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 871
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50559
bin: 9.75e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10110
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.158748551564311e-4
allele num: 8630
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65814
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.095e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.82e0

FS
type: SiteQuality
SIO_000300: 1.334e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.1e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.19e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.312e0

DP
type: SiteQuality
SIO_000300: 4.733994e6

MQ
type: SiteQuality
SIO_000300: 5.963e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -2.22e-1

GenotypeDepth
all individuals: 3898
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 67
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 147
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3724
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1221
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 498
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 628
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50558
bin: 9.75e1
variant carriers: 28

GenotypeQuality
all individuals: 829
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 53
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 160
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 793
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 869
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 866
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.650519031141868e-5
allele num: 11560
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10134
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 27
allele frequency: 4.099605223200729e-4
allele num: 65860
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.62e-1

DP
type: SiteQuality
SIO_000300: 4.734774e6

MQRankSum
type: SiteQuality
SIO_000300: 4.93e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.09e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.77e-1

QD
type: SiteQuality
SIO_000300: 1.42e1

FS
type: SiteQuality
SIO_000300: 2.589e0

VQSLOD
type: SiteQuality
SIO_000300: 3.07e0

MQ
type: SiteQuality
SIO_000300: 5.997e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

GenotypeDepth
all individuals: 3175
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 497
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 156
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 626
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 793
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3792
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 862
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 851
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 147
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 832
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50554
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 1222
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65868
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8632
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 3.028100775193798e-4
allele num: 16512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10138
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.41e-1

MQ
type: SiteQuality
SIO_000300: 5.973e1

VQSLOD
type: SiteQuality
SIO_000300: 1.51e0

DP
type: SiteQuality
SIO_000300: 4.733576e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 9.6e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.41e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.997e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.0e-3

QD
type: SiteQuality
SIO_000300: 1.337e1

GenotypeDepth
all individuals: 3902
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 858
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 793
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 49
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 836
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3856
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 498
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1213
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 829
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 626
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50554
bin: 9.75e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65876
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.652015919709292e-5
allele num: 11558
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10148
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.13e-1

QD
type: SiteQuality
SIO_000300: 1.556e1

MQRankSum
type: SiteQuality
SIO_000300: 1.84e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.219e0

VQSLOD
type: SiteQuality
SIO_000300: 9.2e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.47e-1

MQ
type: SiteQuality
SIO_000300: 5.955e1

DP
type: SiteQuality
SIO_000300: 4.733742e6

FS
type: SiteQuality
SIO_000300: 9.389999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

GenotypeDepth
all individuals: 3153
bin: 9.25e1
variant carriers: 58

GenotypeDepth
all individuals: 3840
bin: 8.25e1
variant carriers: 47

GenotypeDepth
all individuals: 2462
bin: 2.75e1
variant carriers: 50

GenotypeQuality
all individuals: 483
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 598
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 58
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 874
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 815
bin: 8.25e1
variant carriers: 2

GenotypeQuality
all individuals: 24
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 155
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 54
bin: 5.75e1
variant carriers: 2

GenotypeQuality
all individuals: 61
bin: 4.75e1
variant carriers: 5

GenotypeQuality
all individuals: 1172
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 174
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 3556
bin: 6.25e1
variant carriers: 2

GenotypeQuality
all individuals: 85
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 820
bin: 7.75e1
variant carriers: 3

GenotypeQuality
all individuals: 772
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 50881
bin: 9.75e1
variant carriers: 3043

Latino
type: Population
allele count: 259
allele frequency: 2.240484429065744e-2
allele num: 11560
num of homozygotes: 4

African
type: Population
allele count: 58
allele frequency: 5.706414797323888e-3
allele num: 10164
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.477051460361613e-4
allele num: 8628
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2518
allele frequency: 3.821404722879864e-2
allele num: 65892
num of homozygotes: 52

South Asian
type: Population
allele count: 184
allele frequency: 1.114476075105996e-2
allele num: 16510
num of homozygotes: 4

European (Finnish)
type: Population
allele count: 68
allele frequency: 1.028122165104324e-2
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 24
allele frequency: 2.684563758389262e-2
allele num: 894
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.001e0

QD
type: SiteQuality
SIO_000300: 1.243e1

DP
type: SiteQuality
SIO_000300: 4.789422e6

FS
type: SiteQuality
SIO_000300: 2.575e0

MQRankSum
type: SiteQuality
SIO_000300: 1.49e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.26e-1

MQ
type: SiteQuality
SIO_000300: 5.959e1

VQSLOD
type: SiteQuality
SIO_000300: 2.79e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.6e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -3.66e-1

GenotypeDepth
all individuals: 1658
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3254
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3698
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 188
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 854
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 984
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 209
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 510
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 629
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50381
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1225
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 806
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3604
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 114
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 850
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.519341213649761e-5
allele num: 65818
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10140
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.2e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.85e-1

MQ
type: SiteQuality
SIO_000300: 5.987e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.41e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.19e-1

FS
type: SiteQuality
SIO_000300: 6.258e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.39e-1

DP
type: SiteQuality
SIO_000300: 4.639063e6

QD
type: SiteQuality
SIO_000300: 1.173e1

GenotypeDepth
all individuals: 1798
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3996
bin: 7.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4026
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 209
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 806
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 114
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50381
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 79
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 984
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 854
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 510
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3604
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 188
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 850
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1225
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 629
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.318034306907742e-4
allele num: 8628
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10140
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65818
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.85e-1

FS
type: SiteQuality
SIO_000300: 6.258e0

MQ
type: SiteQuality
SIO_000300: 5.987e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.41e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.2e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 4.39e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.19e-1

QD
type: SiteQuality
SIO_000300: 1.173e1

DP
type: SiteQuality
SIO_000300: 4.639063e6

GenotypeDepth
all individuals: 3661
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 2669
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3997
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 804
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50381
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 127
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3430
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 625
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 226
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1208
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 853
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 223
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 850
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 509
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1004
bin: 2.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.519756838905775e-5
allele num: 65800
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10140
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.381e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 7.29e-1

DP
type: SiteQuality
SIO_000300: 4.637829e6

VQSLOD
type: SiteQuality
SIO_000300: -1.114e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.01e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.77e0

QD
type: SiteQuality
SIO_000300: 1.154e1

MQ
type: SiteQuality
SIO_000300: 5.978e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.75e-1

GenotypeDepth
all individuals: 1796
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1542
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1892
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 245
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1044
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 629
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 847
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 246
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 803
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3375
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50381
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 850
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 93
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 510
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1191
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65796
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.319109461966605e-4
allele num: 8624
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10126
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

FS
type: SiteQuality
SIO_000300: 4.49e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.08e0

MQ
type: SiteQuality
SIO_000300: 5.98e1

DP
type: SiteQuality
SIO_000300: 4.636482e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.38e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.2e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.04e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.33e0

QD
type: SiteQuality
SIO_000300: 1.405e1

GenotypeDepth
all individuals: 2338
bin: 2.75e1
variant carriers: 14

GenotypeDepth
all individuals: 3996
bin: 8.25e1
variant carriers: 8

GenotypeDepth
all individuals: 2226
bin: 5.25e1
variant carriers: 8

GenotypeQuality
all individuals: 800
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 136
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3139
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1149
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 835
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50446
bin: 9.75e1
variant carriers: 368

GenotypeQuality
all individuals: 308
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 268
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1152
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 841
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 185
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 611
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 506
bin: 8.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 30
allele frequency: 4.567461404951128e-4
allele num: 65682
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

African
type: Population
allele count: 323
allele frequency: 3.204365079365079e-2
allele num: 10080
num of homozygotes: 6

Latino
type: Population
allele count: 23
allele frequency: 1.989963661533137e-3
allele num: 11558
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 2.237136465324385e-3
allele num: 894
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.277e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.8e-2

QD
type: SiteQuality
SIO_000300: 1.289e1

MQ
type: SiteQuality
SIO_000300: 5.971e1

VQSLOD
type: SiteQuality
SIO_000300: 3.88e0

MQRankSum
type: SiteQuality
SIO_000300: 3.54e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.38e-1

DP
type: SiteQuality
SIO_000300: 4.637009e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.18e-2

FS
type: SiteQuality
SIO_000300: 1.134e0

GenotypeDepth
all individuals: 3268
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4010
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3672
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 349
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1129
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 161
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 500
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 841
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 607
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 829
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 301
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 225
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 798
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50380
bin: 9.75e1
variant carriers: 32

GenotypeQuality
all individuals: 1108
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2897
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 4.75e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.159285879897983e-4
allele num: 8626
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9992
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.818181818181818e-4
allele num: 16500
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.730702665282105e-4
allele num: 11556
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 26
allele frequency: 3.965711845276227e-4
allele num: 65562
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.319e1

MQ
type: SiteQuality
SIO_000300: 5.966e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 4.623138e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.54e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

VQSLOD
type: SiteQuality
SIO_000300: 4.24e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.65e-1

MQRankSum
type: SiteQuality
SIO_000300: 9.8e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -4.84e-1

GenotypeDepth
all individuals: 1777
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 16598
bin: 9.75e1
variant carriers: 122

GenotypeDepth
all individuals: 4010
bin: 7.75e1
variant carriers: 4

GenotypeQuality
all individuals: 1157
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 801
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 840
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2968
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 111
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 339
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 303
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 160
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 603
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 224
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1105
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 500
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50379
bin: 9.75e1
variant carriers: 172

GenotypeQuality
all individuals: 828
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.001200720432259e-4
allele num: 9994
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.818181818181818e-4
allele num: 16500
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 26
allele frequency: 3.931055337163592e-3
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 132
allele frequency: 2.013054352467517e-3
allele num: 65572
num of homozygotes: 1

Latino
type: Population
allele count: 10
allele frequency: 8.656509695290858e-4
allele num: 11552
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.91e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

MQ
type: SiteQuality
SIO_000300: 5.97e1

QD
type: SiteQuality
SIO_000300: 1.283e1

DP
type: SiteQuality
SIO_000300: 4.622675e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.18e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.47e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.6e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.6e0

GenotypeDepth
all individuals: 3717
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4016
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1782
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 304
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 338
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 830
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 165
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3045
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1193
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1106
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 804
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 221
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 500
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 842
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 606
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50357
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 1
allele frequency: 9.992006394884092e-5
allele num: 10008
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65618
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8624
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.873e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.09e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.02e0

VQSLOD
type: SiteQuality
SIO_000300: -1.247e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.0e-3

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

MQRankSum
type: SiteQuality
SIO_000300: 2.96e-1

FS
type: SiteQuality
SIO_000300: 1.548e1

DP
type: SiteQuality
SIO_000300: 4.616282e6

QD
type: SiteQuality
SIO_000300: 1.231e1

GenotypeDepth
all individuals: 3676
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4035
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4016
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 836
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 362
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50355
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 186
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 245
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 804
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1087
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1191
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 498
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2998
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 328
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 828
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 595
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9978
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.656509695290859e-5
allele num: 11552
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65528
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

VQSLOD
type: SiteQuality
SIO_000300: 8.23e-1

MQ
type: SiteQuality
SIO_000300: 5.396e1

DP
type: SiteQuality
SIO_000300: 4.614014e6

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 4.47e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.33e0

MQRankSum
type: SiteQuality
SIO_000300: -5.928e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.3e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -3.95e-1

GenotypeQuality
all individuals: 22
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1087
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 498
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 362
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50355
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 15
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 47
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2998
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 828
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1191
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 804
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 186
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 245
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 328
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 836
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 595
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 86
bin: 4.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.5781955805152e-5
allele num: 65528
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9978
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.95e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

MQ
type: SiteQuality
SIO_000300: 5.396e1

MQRankSum
type: SiteQuality
SIO_000300: -5.928e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.33e0

DP
type: SiteQuality
SIO_000300: 4.614014e6

VQSLOD
type: SiteQuality
SIO_000300: 8.23e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.3e-2

QD
type: SiteQuality
SIO_000300: 4.47e0

GenotypeDepth
all individuals: 2676
bin: 5.75e1
variant carriers: 1

GenotypeDepth
all individuals: 3271
bin: 9.25e1
variant carriers: 4

GenotypeDepth
all individuals: 16519
bin: 9.75e1
variant carriers: 51

GenotypeQuality
all individuals: 41
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1186
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 591
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 250
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 829
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 369
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 76
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1088
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 328
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 181
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2969
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 802
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 498
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 832
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50372
bin: 9.75e1
variant carriers: 125

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 118
allele frequency: 1.183788121990369e-2
allele num: 9968
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.580292528016123e-5
allele num: 65498
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8626
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.596952908587258e-4
allele num: 11552
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.062810719049351e-5
allele num: 16494
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.46e0

DP
type: SiteQuality
SIO_000300: 4.612741e6

QD
type: SiteQuality
SIO_000300: 1.317e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.1e-3

MQRankSum
type: SiteQuality
SIO_000300: 2.78e-1

MQ
type: SiteQuality
SIO_000300: 5.959e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.45e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.8e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.3e-2

GenotypeDepth
all individuals: 3718
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 4013
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3672
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 329
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 499
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2970
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50341
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 1203
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 375
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 823
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 184
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 87
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 592
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 51
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 251
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 833
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 804
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1093
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.477857639693948e-4
allele num: 8626
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65472
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9966
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.1e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.899999999999999e-1

FS
type: SiteQuality
SIO_000300: 2.477e0

QD
type: SiteQuality
SIO_000300: 1.314e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.32e0

DP
type: SiteQuality
SIO_000300: 4.609258e6

MQ
type: SiteQuality
SIO_000300: 5.956e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.861e0

MQRankSum
type: SiteQuality
SIO_000300: 1.59e-1

GenotypeDepth
all individuals: 4043
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1759
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3719
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1158
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 366
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 497
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 193
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 397
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 146
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 799
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 833
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 291
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 818
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2724
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 581
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1065
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50336
bin: 9.75e1
variant carriers: 6

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.175153683824204e-5
allele num: 65394
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9910
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8622
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.76e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.68e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.5e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.13e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.7e-2

MQ
type: SiteQuality
SIO_000300: 5.983e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-3

QD
type: SiteQuality
SIO_000300: 1.158e1

DP
type: SiteQuality
SIO_000300: 4.60601e6

GenotypeDepth
all individuals: 2686
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 16471
bin: 9.75e1
variant carriers: 18

GenotypeDepth
all individuals: 2230
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 814
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1054
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 831
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2663
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 196
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 50334
bin: 9.75e1
variant carriers: 32

GenotypeQuality
all individuals: 149
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 296
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 498
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 416
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 381
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1195
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 574
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 796
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.116207951070337e-5
allele num: 65400
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.116071428571429e-3
allele num: 896
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9908
num of homozygotes: 0

Latino
type: Population
allele count: 27
allele frequency: 2.337257617728532e-3
allele num: 11552
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.314e1

MQ
type: SiteQuality
SIO_000300: 5.946e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.5e-3

MQRankSum
type: SiteQuality
SIO_000300: -6.4e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.03e0

VQSLOD
type: SiteQuality
SIO_000300: 3.68e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.3e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.54e-1

DP
type: SiteQuality
SIO_000300: 4.604832e6

GenotypeDepth
all individuals: 4045
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3673
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3136
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1054
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 381
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 498
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1195
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 80
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 149
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2663
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50334
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 574
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 196
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 831
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 296
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 416
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 814
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 796
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65400
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9908
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.062810719049351e-5
allele num: 16494
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.03e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.5e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 3.68e0

QD
type: SiteQuality
SIO_000300: 1.314e1

DP
type: SiteQuality
SIO_000300: 4.604832e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.54e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.4e-2

MQ
type: SiteQuality
SIO_000300: 5.946e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.3e-2

GenotypeDepth
all individuals: 1893
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3724
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3672
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 576
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 814
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 419
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 190
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1047
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 310
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 83
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 831
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 104
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1194
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2594
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50334
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 797
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 154
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 389
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 501
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9900
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.656509695290859e-5
allele num: 11552
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16494
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.528864970645792e-5
allele num: 65408
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.963e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

MQRankSum
type: SiteQuality
SIO_000300: 8.84e-1

MQ
type: SiteQuality
SIO_000300: 5.956e1

QD
type: SiteQuality
SIO_000300: 1.252e1

VQSLOD
type: SiteQuality
SIO_000300: 8.41e-1

FS
type: SiteQuality
SIO_000300: 3.73e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.24e-1

DP
type: SiteQuality
SIO_000300: 4.603382e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.0e-2

GenotypeDepth
all individuals: 3141
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4046
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3673
bin: 8.75e1
variant carriers: 3

GenotypeQuality
all individuals: 795
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 809
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 82
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1203
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 574
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 501
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 190
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 829
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 382
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 307
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 154
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2650
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 416
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1042
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50335
bin: 9.75e1
variant carriers: 20

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.320185614849188e-4
allele num: 8620
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9894
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65400
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

South Asian
type: Population
allele count: 19
allele frequency: 1.151794374393792e-3
allele num: 16496
num of homozygotes: 1

VQSLOD
type: SiteQuality
SIO_000300: 2.89e0

BaseQRankSum
type: SiteQuality
SIO_000300: 8.68e-1

QD
type: SiteQuality
SIO_000300: 1.39e1

DP
type: SiteQuality
SIO_000300: 4.603369e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.13e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.15e-2

MQ
type: SiteQuality
SIO_000300: 5.958e1

FS
type: SiteQuality
SIO_000300: 1.868e0

MQRankSum
type: SiteQuality
SIO_000300: 1.6e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.23e-1

GenotypeDepth
all individuals: 2228
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4046
bin: 7.25e1
variant carriers: 0

GenotypeDepth
all individuals: 4024
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2696
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1052
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 191
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 43
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 810
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 142
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 573
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 84
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 415
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 390
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 50329
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 795
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 500
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1232
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 301
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 829
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.586594911937377e-5
allele num: 65408
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.010305112143867e-4
allele num: 9898
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11552
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.49e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.404e0

MQRankSum
type: SiteQuality
SIO_000300: 3.12e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

QD
type: SiteQuality
SIO_000300: 2.802e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.94e-1

FS
type: SiteQuality
SIO_000300: 5.031e0

MQ
type: SiteQuality
SIO_000300: 5.933e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.32e0

DP
type: SiteQuality
SIO_000300: 4.602947e6

GenotypeDepth
all individuals: 1893
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3723
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1792
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 133
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 75
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 119
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1249
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 574
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 795
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 57
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 502
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1067
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 45
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 397
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 182
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 809
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 829
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2727
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 290
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 416
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50329
bin: 9.75e1
variant carriers: 2

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.056795255853763e-5
allele num: 65428
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9904
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.279e1

FS
type: SiteQuality
SIO_000300: 4.279e0

VQSLOD
type: SiteQuality
SIO_000300: 9.96e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

MQ
type: SiteQuality
SIO_000300: 5.945e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.93e-1

DP
type: SiteQuality
SIO_000300: 4.60246e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.504e0

MQRankSum
type: SiteQuality
SIO_000300: 1.4e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.47e-1