9-74810399-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74810399
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 74810399
    reference: chr 9
allele count: 2
allele frequency: 2.66794728136172e-5
allele num: 74964
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000238018
  ensembl transcript: ENST00000238018
  gene symbol: GDA
  hgvsc: ENST00000238018.4:c.124-17C>T
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000351170
  ensembl transcript: ENST00000358399
  gene symbol: GDA
  hgvsc: ENST00000358399.3:c.124-17C>T
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000436619
  ensembl transcript: ENST00000475764
  gene symbol: GDA
  hgvsc: ENST00000475764.1:c.124-17C>T
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366188
  ensembl transcript: ENST00000376989
  gene symbol: GDA
  hgvsc: ENST00000376989.3:c.49-17C>T
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366185
  ensembl transcript: ENST00000376986
  gene symbol: GDA
  hgvsc: ENST00000376986.1:c.2-21C>T
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl transcript: ENST00000477618
  gene symbol: GDA
  hgvsc: ENST00000477618.1:n.338-21C>T
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000437972
  ensembl transcript: ENST00000545168
  gene symbol: GDA
  hgvsc: ENST00000545168.1:c.-99-17C>T
  variant of: http://identifiers.org/hgnc/4212
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 995
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7638
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3255
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21719
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1413
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 462
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22830
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1181
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
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genotype quality: GenotypeQuality
  all individuals: 446
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 509
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 402
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 616
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1038
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 287
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 250
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1855
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3338
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
population: African
population: Latino
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum

9-74810403-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74810403
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 74810403
    reference: chr 9
allele count: 2
allele frequency: 2.443494196701283e-5
allele num: 81850
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000351170
  ensembl transcript: ENST00000358399
  gene symbol: GDA
  hgvsc: ENST00000358399.3:c.124-13C>T
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000238018
  ensembl transcript: ENST00000238018
  gene symbol: GDA
  hgvsc: ENST00000238018.4:c.124-13C>T
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl transcript: ENST00000477618
  gene symbol: GDA
  hgvsc: ENST00000477618.1:n.338-17C>T
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000437972
  ensembl transcript: ENST00000545168
  gene symbol: GDA
  hgvsc: ENST00000545168.1:c.-99-13C>T
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366188
  ensembl transcript: ENST00000376989
  gene symbol: GDA
  hgvsc: ENST00000376989.3:c.49-13C>T
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000436619
  ensembl transcript: ENST00000475764
  gene symbol: GDA
  hgvsc: ENST00000475764.1:c.124-13C>T
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366185
  ensembl transcript: ENST00000376986
  gene symbol: GDA
  hgvsc: ENST00000376986.1:c.2-17C>T
  variant of: http://identifiers.org/hgnc/4212
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27969
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3674
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1112
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5595
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 629
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1282
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18772
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 396
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1163
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 653
  bin: 7.5e0
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genotype quality: GenotypeQuality
  all individuals: 450
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18229
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  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2046
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 314
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 360
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD

9-74810406-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74810406
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 74810406
    reference: chr 9
allele count: 1
allele frequency: 1.147894761008311e-5
allele num: 87116
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366185
  ensembl transcript: ENST00000376986
  gene symbol: GDA
  hgvsc: ENST00000376986.1:c.2-14T>C
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366188
  ensembl transcript: ENST00000376989
  gene symbol: GDA
  hgvsc: ENST00000376989.3:c.49-10T>C
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl transcript: ENST00000477618
  gene symbol: GDA
  hgvsc: ENST00000477618.1:n.338-14T>C
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000437972
  ensembl transcript: ENST00000545168
  gene symbol: GDA
  hgvsc: ENST00000545168.1:c.-99-10T>C
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000436619
  ensembl transcript: ENST00000475764
  gene symbol: GDA
  hgvsc: ENST00000475764.1:c.124-10T>C
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000351170
  ensembl transcript: ENST00000358399
  gene symbol: GDA
  hgvsc: ENST00000358399.3:c.124-10T>C
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000238018
  ensembl transcript: ENST00000238018
  gene symbol: GDA
  hgvsc: ENST00000238018.4:c.124-10T>C
  variant of: http://identifiers.org/hgnc/4212
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3882
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.75e1
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genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4439
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 264
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1997
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 121
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 264
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 30
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genotype quality: GenotypeQuality
  all individuals: 2257
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP

9-74810407-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74810407
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 74810407
    reference: chr 9
allele count: 1
allele frequency: 1.129611639518334e-5
allele num: 88526
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000238018
  ensembl transcript: ENST00000238018
  gene symbol: GDA
  hgvsc: ENST00000238018.4:c.124-9C>T
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000437972
  ensembl transcript: ENST00000545168
  gene symbol: GDA
  hgvsc: ENST00000545168.1:c.-99-9C>T
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366185
  ensembl transcript: ENST00000376986
  gene symbol: GDA
  hgvsc: ENST00000376986.1:c.2-13C>T
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366188
  ensembl transcript: ENST00000376989
  gene symbol: GDA
  hgvsc: ENST00000376989.3:c.49-9C>T
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000351170
  ensembl transcript: ENST00000358399
  gene symbol: GDA
  hgvsc: ENST00000358399.3:c.124-9C>T
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000436619
  ensembl transcript: ENST00000475764
  gene symbol: GDA
  hgvsc: ENST00000475764.1:c.124-9C>T
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl transcript: ENST00000477618
  gene symbol: GDA
  hgvsc: ENST00000477618.1:n.338-13C>T
  variant of: http://identifiers.org/hgnc/4212
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1349
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
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  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2229
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 263
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1838
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 400
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 428
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 415
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
reference allele: C
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff

9-74810408-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74810408
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 74810408
    reference: chr 9
allele count: 1
allele frequency: 1.107100945464207e-5
allele num: 90326
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366188
  ensembl transcript: ENST00000376989
  gene symbol: GDA
  hgvsc: ENST00000376989.3:c.49-8T>C
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000238018
  ensembl transcript: ENST00000238018
  gene symbol: GDA
  hgvsc: ENST00000238018.4:c.124-8T>C
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000436619
  ensembl transcript: ENST00000475764
  gene symbol: GDA
  hgvsc: ENST00000475764.1:c.124-8T>C
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000437972
  ensembl transcript: ENST00000545168
  gene symbol: GDA
  hgvsc: ENST00000545168.1:c.-99-8T>C
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl transcript: ENST00000477618
  gene symbol: GDA
  hgvsc: ENST00000477618.1:n.338-12T>C
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366185
  ensembl transcript: ENST00000376986
  gene symbol: GDA
  hgvsc: ENST00000376986.1:c.2-12T>C
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000351170
  ensembl transcript: ENST00000358399
  gene symbol: GDA
  hgvsc: ENST00000358399.3:c.124-8T>C
  variant of: http://identifiers.org/hgnc/4212
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15086
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1339
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3819
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4198
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 885
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33377
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 482
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 355
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 341
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1756
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2378
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1694
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14882
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33369
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 1.75e1
  variant carriers: 0
hgvs: c.124-8T>C
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: T
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP

9-74810419-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74810419
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 74810419
    reference: chr 9
allele count: 9
allele frequency: 8.613759044446996e-5
allele num: 104484
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366185
  ensembl transcript: ENST00000376986
  gene symbol: GDA
  hgvsc: ENST00000376986.1:c.2-1G>A
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000436619
  ensembl transcript: ENST00000475764
  gene symbol: GDA
  hgvsc: ENST00000475764.1:c.127G>A
  hgvsp: ENSP00000436619.1:p.Val43Met
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000119125
  ensembl transcript: ENST00000477618
  gene symbol: GDA
  hgvsc: ENST00000477618.1:n.338-1G>A
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000238018
  ensembl transcript: ENST00000238018
  gene symbol: GDA
  hgvsc: ENST00000238018.4:c.127G>A
  hgvsp: ENSP00000238018.4:p.Val43Met
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000437972
  ensembl transcript: ENST00000545168
  gene symbol: GDA
  hgvsc: ENST00000545168.1:c.-96G>A
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000351170
  ensembl transcript: ENST00000358399
  gene symbol: GDA
  hgvsc: ENST00000358399.3:c.127G>A
  hgvsp: ENSP00000351170.3:p.Val43Met
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366188
  ensembl transcript: ENST00000376989
  gene symbol: GDA
  hgvsc: ENST00000376989.3:c.52G>A
  hgvsp: ENSP00000366188.3:p.Val18Met
  variant of: http://identifiers.org/hgnc/4212
canonical: false
consequence: splice acceptor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41300
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5462
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1475
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1802
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8318
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 496
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 765
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 274
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 736
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1473
  bin: 9.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 8396
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
hgvs: n.338-1G>A
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: MQ

9-74810433-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74810433
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 74810433
    reference: chr 9
allele count: 1
allele frequency: 8.844235327413593e-6
allele num: 113068
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000351170
  ensembl transcript: ENST00000358399
  gene symbol: GDA
  hgvsc: ENST00000358399.3:c.141A>G
  hgvsp: ENST00000358399.3:c.141A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366188
  ensembl transcript: ENST00000376989
  gene symbol: GDA
  hgvsc: ENST00000376989.3:c.66A>G
  hgvsp: ENST00000376989.3:c.66A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119125
  ensembl transcript: ENST00000477618
  gene symbol: GDA
  hgvsc: ENST00000477618.1:n.351A>G
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366185
  ensembl transcript: ENST00000376986
  gene symbol: GDA
  hgvsc: ENST00000376986.1:c.15A>G
  hgvsp: ENST00000376986.1:c.15A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000238018
  ensembl transcript: ENST00000238018
  gene symbol: GDA
  hgvsc: ENST00000238018.4:c.141A>G
  hgvsp: ENST00000238018.4:c.141A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000436619
  ensembl transcript: ENST00000475764
  gene symbol: GDA
  hgvsc: ENST00000475764.1:c.141A>G
  hgvsp: ENST00000475764.1:c.141A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000437972
  ensembl transcript: ENST00000545168
  gene symbol: GDA
  hgvsc: ENST00000545168.1:c.-82A>G
  variant of: http://identifiers.org/hgnc/4212
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1570
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6647
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 886
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45346
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4123
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1468
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 240
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 275
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 894
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3107
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 372
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Glu47Glu
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
reference allele: A
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: QD

http://identifiers.org/exac.variant/9-74810440-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74810440
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 74810440
    reference: chr 9
allele count: 2
allele frequency: 1.73550850399167e-5
allele num: 115240
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366188
  ensembl transcript: ENST00000376989
  gene symbol: GDA
  hgvsc: ENST00000376989.3:c.73C>A
  hgvsp: ENSP00000366188.3:p.Gln25Lys
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000238018
  ensembl transcript: ENST00000238018
  gene symbol: GDA
  hgvsc: ENST00000238018.4:c.148C>A
  hgvsp: ENSP00000238018.4:p.Gln50Lys
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366185
  ensembl transcript: ENST00000376986
  gene symbol: GDA
  hgvsc: ENST00000376986.1:c.22C>A
  hgvsp: ENSP00000366185.1:p.Gln8Lys
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000437972
  ensembl transcript: ENST00000545168
  gene symbol: GDA
  hgvsc: ENST00000545168.1:c.-75C>A
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000351170
  ensembl transcript: ENST00000358399
  gene symbol: GDA
  hgvsc: ENST00000358399.3:c.148C>A
  hgvsp: ENSP00000351170.3:p.Gln50Lys
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000436619
  ensembl transcript: ENST00000475764
  gene symbol: GDA
  hgvsc: ENST00000475764.1:c.148C>A
  hgvsp: ENSP00000436619.1:p.Gln50Lys
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119125
  ensembl transcript: ENST00000477618
  gene symbol: GDA
  hgvsc: ENST00000477618.1:n.358C>A
  variant of: http://identifiers.org/hgnc/4212
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7072
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3042
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46132
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 677
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1665
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 347
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3213
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 271
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Gln50Lys
num of homozygotes: 0
population: Latino
population: African
population: Other
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD

9-74810454-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74810454
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 74810454
    reference: chr 9
allele count: 1
allele frequency: 8.518322912584971e-6
allele num: 117394
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366188
  ensembl transcript: ENST00000376989
  gene symbol: GDA
  hgvsc: ENST00000376989.3:c.87G>A
  hgvsp: ENST00000376989.3:c.87G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119125
  ensembl transcript: ENST00000477618
  gene symbol: GDA
  hgvsc: ENST00000477618.1:n.372G>A
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366185
  ensembl transcript: ENST00000376986
  gene symbol: GDA
  hgvsc: ENST00000376986.1:c.36G>A
  hgvsp: ENST00000376986.1:c.36G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000436619
  ensembl transcript: ENST00000475764
  gene symbol: GDA
  hgvsc: ENST00000475764.1:c.162G>A
  hgvsp: ENST00000475764.1:c.162G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000351170
  ensembl transcript: ENST00000358399
  gene symbol: GDA
  hgvsc: ENST00000358399.3:c.162G>A
  hgvsp: ENST00000358399.3:c.162G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000437972
  ensembl transcript: ENST00000545168
  gene symbol: GDA
  hgvsc: ENST00000545168.1:c.-61G>A
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000238018
  ensembl transcript: ENST00000238018
  gene symbol: GDA
  hgvsc: ENST00000238018.4:c.162G>A
  hgvsp: ENST00000238018.4:c.162G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4212
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1732
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1967
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7748
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46639
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 922
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2180
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 247
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 549
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3305
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 275
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Leu54Leu
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: African
population: South Asian
reference allele: G
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum

9-74810477-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74810477
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 74810477
    reference: chr 9
allele count: 3
allele frequency: 2.549632852869187e-5
allele num: 117664
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000436619
  ensembl transcript: ENST00000475764
  gene symbol: GDA
  hgvsc: ENST00000475764.1:c.185C>T
  hgvsp: ENSP00000436619.1:p.Pro62Leu
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000351170
  ensembl transcript: ENST00000358399
  gene symbol: GDA
  hgvsc: ENST00000358399.3:c.185C>T
  hgvsp: ENSP00000351170.3:p.Pro62Leu
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366188
  ensembl transcript: ENST00000376989
  gene symbol: GDA
  hgvsc: ENST00000376989.3:c.110C>T
  hgvsp: ENSP00000366188.3:p.Pro37Leu
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000437972
  ensembl transcript: ENST00000545168
  gene symbol: GDA
  hgvsc: ENST00000545168.1:c.-38C>T
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000238018
  ensembl transcript: ENST00000238018
  gene symbol: GDA
  hgvsc: ENST00000238018.4:c.185C>T
  hgvsp: ENSP00000238018.4:p.Pro62Leu
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119125
  ensembl transcript: ENST00000477618
  gene symbol: GDA
  hgvsc: ENST00000477618.1:n.395C>T
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366185
  ensembl transcript: ENST00000376986
  gene symbol: GDA
  hgvsc: ENST00000376986.1:c.59C>T
  hgvsp: ENSP00000366185.1:p.Pro20Leu
  variant of: http://identifiers.org/hgnc/4212
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1253
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45072
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1827
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1774
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8516
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 859
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 521
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2398
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Pro62Leu
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: C
site quality: QD
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum

9-74810478-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74810478
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 74810478
    reference: chr 9
allele count: 19
allele frequency: 1.61594856180578e-4
allele num: 117578
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366188
  ensembl transcript: ENST00000376989
  gene symbol: GDA
  hgvsc: ENST00000376989.3:c.111G>A
  hgvsp: ENST00000376989.3:c.111G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119125
  ensembl transcript: ENST00000477618
  gene symbol: GDA
  hgvsc: ENST00000477618.1:n.396G>A
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366185
  ensembl transcript: ENST00000376986
  gene symbol: GDA
  hgvsc: ENST00000376986.1:c.60G>A
  hgvsp: ENST00000376986.1:c.60G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000351170
  ensembl transcript: ENST00000358399
  gene symbol: GDA
  hgvsc: ENST00000358399.3:c.186G>A
  hgvsp: ENST00000358399.3:c.186G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000437972
  ensembl transcript: ENST00000545168
  gene symbol: GDA
  hgvsc: ENST00000545168.1:c.-37G>A
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000436619
  ensembl transcript: ENST00000475764
  gene symbol: GDA
  hgvsc: ENST00000475764.1:c.186G>A
  hgvsp: ENST00000475764.1:c.186G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000238018
  ensembl transcript: ENST00000238018
  gene symbol: GDA
  hgvsc: ENST00000238018.4:c.186G>A
  hgvsp: ENST00000238018.4:c.186G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4212
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1843
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 583
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1836
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1347
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44753
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8574
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 875
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 279
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3200
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 226
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 845
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 460
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48575
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Pro62Pro
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: South Asian
population: European (Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP

9-74810482-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74810482
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 74810482
    reference: chr 9
allele count: 1
allele frequency: 8.532277606184194e-6
allele num: 117202
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000437972
  ensembl transcript: ENST00000545168
  gene symbol: GDA
  hgvsc: ENST00000545168.1:c.-33G>A
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000351170
  ensembl transcript: ENST00000358399
  gene symbol: GDA
  hgvsc: ENST00000358399.3:c.190G>A
  hgvsp: ENSP00000351170.3:p.Glu64Lys
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366188
  ensembl transcript: ENST00000376989
  gene symbol: GDA
  hgvsc: ENST00000376989.3:c.115G>A
  hgvsp: ENSP00000366188.3:p.Glu39Lys
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366185
  ensembl transcript: ENST00000376986
  gene symbol: GDA
  hgvsc: ENST00000376986.1:c.64G>A
  hgvsp: ENSP00000366185.1:p.Glu22Lys
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000436619
  ensembl transcript: ENST00000475764
  gene symbol: GDA
  hgvsc: ENST00000475764.1:c.190G>A
  hgvsp: ENSP00000436619.1:p.Glu64Lys
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119125
  ensembl transcript: ENST00000477618
  gene symbol: GDA
  hgvsc: ENST00000477618.1:n.400G>A
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000238018
  ensembl transcript: ENST00000238018
  gene symbol: GDA
  hgvsc: ENST00000238018.4:c.190G>A
  hgvsp: ENSP00000238018.4:p.Glu64Lys
  variant of: http://identifiers.org/hgnc/4212
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2057
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1859
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43929
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1756
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 777
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8599
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 504
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3172
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 608
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47530
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 361
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 473
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 510
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 451
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 868
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Glu64Lys
num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
reference allele: G
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD

9-74810485-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74810485
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 74810485
    reference: chr 9
allele count: 1
allele frequency: 8.534170819963133e-6
allele num: 117176
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000436619
  ensembl transcript: ENST00000475764
  gene symbol: GDA
  hgvsc: ENST00000475764.1:c.193A>G
  hgvsp: ENSP00000436619.1:p.Ile65Val
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366188
  ensembl transcript: ENST00000376989
  gene symbol: GDA
  hgvsc: ENST00000376989.3:c.118A>G
  hgvsp: ENSP00000366188.3:p.Ile40Val
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119125
  ensembl transcript: ENST00000477618
  gene symbol: GDA
  hgvsc: ENST00000477618.1:n.403A>G
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000238018
  ensembl transcript: ENST00000238018
  gene symbol: GDA
  hgvsc: ENST00000238018.4:c.193A>G
  hgvsp: ENSP00000238018.4:p.Ile65Val
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000351170
  ensembl transcript: ENST00000358399
  gene symbol: GDA
  hgvsc: ENST00000358399.3:c.193A>G
  hgvsp: ENSP00000351170.3:p.Ile65Val
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366185
  ensembl transcript: ENST00000376986
  gene symbol: GDA
  hgvsc: ENST00000376986.1:c.67A>G
  hgvsp: ENSP00000366185.1:p.Ile23Val
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000437972
  ensembl transcript: ENST00000545168
  gene symbol: GDA
  hgvsc: ENST00000545168.1:c.-30A>G
  variant of: http://identifiers.org/hgnc/4212
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1964
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 488
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1712
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8539
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 798
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43892
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2088
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47923
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 268
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1469
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 510
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 597
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ile65Val
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/9-74810494-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74810494
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 74810494
    reference: chr 9
allele count: 4
allele frequency: 3.439735828288387e-5
allele num: 116288
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119125
  ensembl transcript: ENST00000477618
  gene symbol: GDA
  hgvsc: ENST00000477618.1:n.412C>A
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366185
  ensembl transcript: ENST00000376986
  gene symbol: GDA
  hgvsc: ENST00000376986.1:c.76C>A
  hgvsp: ENSP00000366185.1:p.Leu26Met
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000351170
  ensembl transcript: ENST00000358399
  gene symbol: GDA
  hgvsc: ENST00000358399.3:c.202C>A
  hgvsp: ENSP00000351170.3:p.Leu68Met
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366188
  ensembl transcript: ENST00000376989
  gene symbol: GDA
  hgvsc: ENST00000376989.3:c.127C>A
  hgvsp: ENSP00000366188.3:p.Leu43Met
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000436619
  ensembl transcript: ENST00000475764
  gene symbol: GDA
  hgvsc: ENST00000475764.1:c.202C>A
  hgvsp: ENSP00000436619.1:p.Leu68Met
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000238018
  ensembl transcript: ENST00000238018
  gene symbol: GDA
  hgvsc: ENST00000238018.4:c.202C>A
  hgvsp: ENSP00000238018.4:p.Leu68Met
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000437972
  ensembl transcript: ENST00000545168
  gene symbol: GDA
  hgvsc: ENST00000545168.1:c.-21C>A
  variant of: http://identifiers.org/hgnc/4212
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3088
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1720
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2493
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42054
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1278
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8341
  bin: 2.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3095
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 480
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1472
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 602
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 854
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 508
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Leu68Met
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum

9-74810498-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74810498
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 74810498
    reference: chr 9
allele count: 1
allele frequency: 8.641399215360951e-6
allele num: 115722
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000437972
  ensembl transcript: ENST00000545168
  gene symbol: GDA
  hgvsc: ENST00000545168.1:c.-17G>T
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119125
  ensembl transcript: ENST00000477618
  gene symbol: GDA
  hgvsc: ENST00000477618.1:n.416G>T
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000351170
  ensembl transcript: ENST00000358399
  gene symbol: GDA
  hgvsc: ENST00000358399.3:c.206G>T
  hgvsp: ENSP00000351170.3:p.Ser69Ile
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366185
  ensembl transcript: ENST00000376986
  gene symbol: GDA
  hgvsc: ENST00000376986.1:c.80G>T
  hgvsp: ENSP00000366185.1:p.Ser27Ile
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366188
  ensembl transcript: ENST00000376989
  gene symbol: GDA
  hgvsc: ENST00000376989.3:c.131G>T
  hgvsp: ENSP00000366188.3:p.Ser44Ile
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000238018
  ensembl transcript: ENST00000238018
  gene symbol: GDA
  hgvsc: ENST00000238018.4:c.206G>T
  hgvsp: ENSP00000238018.4:p.Ser69Ile
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000436619
  ensembl transcript: ENST00000475764
  gene symbol: GDA
  hgvsc: ENST00000475764.1:c.206G>T
  hgvsp: ENSP00000436619.1:p.Ser69Ile
  variant of: http://identifiers.org/hgnc/4212
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8310
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3904
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1711
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2755
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1529
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40757
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4522
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 288
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 840
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1156
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 440
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 363
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 657
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ser69Ile
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ

9-74810499-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74810499
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 74810499
    reference: chr 9
allele count: 11
allele frequency: 9.516558812333461e-5
allele num: 115588
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000351170
  ensembl transcript: ENST00000358399
  gene symbol: GDA
  hgvsc: ENST00000358399.3:c.207C>T
  hgvsp: ENST00000358399.3:c.207C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000437972
  ensembl transcript: ENST00000545168
  gene symbol: GDA
  hgvsc: ENST00000545168.1:c.-16C>T
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000436619
  ensembl transcript: ENST00000475764
  gene symbol: GDA
  hgvsc: ENST00000475764.1:c.207C>T
  hgvsp: ENST00000475764.1:c.207C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366188
  ensembl transcript: ENST00000376989
  gene symbol: GDA
  hgvsc: ENST00000376989.3:c.132C>T
  hgvsp: ENST00000376989.3:c.132C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366185
  ensembl transcript: ENST00000376986
  gene symbol: GDA
  hgvsc: ENST00000376986.1:c.81C>T
  hgvsp: ENST00000376986.1:c.81C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119125
  ensembl transcript: ENST00000477618
  gene symbol: GDA
  hgvsc: ENST00000477618.1:n.417C>T
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000238018
  ensembl transcript: ENST00000238018
  gene symbol: GDA
  hgvsc: ENST00000238018.4:c.207C>T
  hgvsp: ENST00000238018.4:c.207C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4212
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1721
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8287
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2818
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40410
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1593
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 506
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4119
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 6.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 448
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1479
  bin: 9.75e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 3017
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 784
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 268
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4673
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ser69Ser
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum

9-74810516-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74810516
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 74810516
    reference: chr 9
allele count: 1
allele frequency: 8.901865831078194e-6
allele num: 112336
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366188
  ensembl transcript: ENST00000376989
  gene symbol: GDA
  hgvsc: ENST00000376989.3:c.137+12C>T
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000238018
  ensembl transcript: ENST00000238018
  gene symbol: GDA
  hgvsc: ENST00000238018.4:c.212+12C>T
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl transcript: ENST00000477618
  gene symbol: GDA
  hgvsc: ENST00000477618.1:n.422+12C>T
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000351170
  ensembl transcript: ENST00000358399
  gene symbol: GDA
  hgvsc: ENST00000358399.3:c.212+12C>T
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366185
  ensembl transcript: ENST00000376986
  gene symbol: GDA
  hgvsc: ENST00000376986.1:c.86+12C>T
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000437972
  ensembl transcript: ENST00000545168
  gene symbol: GDA
  hgvsc: ENST00000545168.1:c.-11+12C>T
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000436619
  ensembl transcript: ENST00000475764
  gene symbol: GDA
  hgvsc: ENST00000475764.1:c.212+12C>T
  variant of: http://identifiers.org/hgnc/4212
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7593
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1738
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8742
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2752
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4220
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33834
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8035
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1623
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 752
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 547
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 234
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2912
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 550
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 138
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 742
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
population: South Asian
population: African
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum

9-74810522-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74810522
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 74810522
    reference: chr 9
allele count: 1
allele frequency: 8.983273145403258e-6
allele num: 111318
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl transcript: ENST00000477618
  gene symbol: GDA
  hgvsc: ENST00000477618.1:n.422+18C>G
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366185
  ensembl transcript: ENST00000376986
  gene symbol: GDA
  hgvsc: ENST00000376986.1:c.86+18C>G
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366188
  ensembl transcript: ENST00000376989
  gene symbol: GDA
  hgvsc: ENST00000376989.3:c.137+18C>G
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000437972
  ensembl transcript: ENST00000545168
  gene symbol: GDA
  hgvsc: ENST00000545168.1:c.-11+18C>G
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000351170
  ensembl transcript: ENST00000358399
  gene symbol: GDA
  hgvsc: ENST00000358399.3:c.212+18C>G
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000238018
  ensembl transcript: ENST00000238018
  gene symbol: GDA
  hgvsc: ENST00000238018.4:c.212+18C>G
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000436619
  ensembl transcript: ENST00000475764
  gene symbol: GDA
  hgvsc: ENST00000475764.1:c.212+18C>G
  variant of: http://identifiers.org/hgnc/4212
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3481
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4642
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7137
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30946
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1647
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10971
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 788
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3737
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 621
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 735
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 265
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2136
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 236
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 487
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: MQ
site quality: ClippingRankSum

9-74810522-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74810522
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 74810522
    reference: chr 9
allele count: 1
allele frequency: 8.983273145403258e-6
allele num: 111318
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl transcript: ENST00000477618
  gene symbol: GDA
  hgvsc: ENST00000477618.1:n.422+18C>T
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000436619
  ensembl transcript: ENST00000475764
  gene symbol: GDA
  hgvsc: ENST00000475764.1:c.212+18C>T
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366185
  ensembl transcript: ENST00000376986
  gene symbol: GDA
  hgvsc: ENST00000376986.1:c.86+18C>T
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000351170
  ensembl transcript: ENST00000358399
  gene symbol: GDA
  hgvsc: ENST00000358399.3:c.212+18C>T
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366188
  ensembl transcript: ENST00000376989
  gene symbol: GDA
  hgvsc: ENST00000376989.3:c.137+18C>T
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000238018
  ensembl transcript: ENST00000238018
  gene symbol: GDA
  hgvsc: ENST00000238018.4:c.212+18C>T
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000437972
  ensembl transcript: ENST00000545168
  gene symbol: GDA
  hgvsc: ENST00000545168.1:c.-11+18C>T
  variant of: http://identifiers.org/hgnc/4212
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3481
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10971
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4642
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1647
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30946
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7137
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 236
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9310
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 735
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 788
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 487
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2602
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 407
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 621
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: QD

9-74810523-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74810523
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 74810523
    reference: chr 9
allele count: 1
allele frequency: 9.00657479960371e-6
allele num: 111030
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366185
  ensembl transcript: ENST00000376986
  gene symbol: GDA
  hgvsc: ENST00000376986.1:c.86+19C>T
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000238018
  ensembl transcript: ENST00000238018
  gene symbol: GDA
  hgvsc: ENST00000238018.4:c.212+19C>T
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366188
  ensembl transcript: ENST00000376989
  gene symbol: GDA
  hgvsc: ENST00000376989.3:c.137+19C>T
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl transcript: ENST00000477618
  gene symbol: GDA
  hgvsc: ENST00000477618.1:n.422+19C>T
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000351170
  ensembl transcript: ENST00000358399
  gene symbol: GDA
  hgvsc: ENST00000358399.3:c.212+19C>T
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000436619
  ensembl transcript: ENST00000475764
  gene symbol: GDA
  hgvsc: ENST00000475764.1:c.212+19C>T
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000437972
  ensembl transcript: ENST00000545168
  gene symbol: GDA
  hgvsc: ENST00000545168.1:c.-11+19C>T
  variant of: http://identifiers.org/hgnc/4212
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11532
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4733
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3687
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30147
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7035
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1671
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32360
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3037
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3951
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9580
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2280
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2597
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 730
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP

9-74810547-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74810547
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 74810547
    reference: chr 9
allele count: 7
allele frequency: 6.639854302625588e-5
allele num: 105424
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000351170
  ensembl transcript: ENST00000358399
  gene symbol: GDA
  hgvsc: ENST00000358399.3:c.212+43G>A
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366188
  ensembl transcript: ENST00000376989
  gene symbol: GDA
  hgvsc: ENST00000376989.3:c.137+43G>A
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000437972
  ensembl transcript: ENST00000545168
  gene symbol: GDA
  hgvsc: ENST00000545168.1:c.-11+43G>A
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000238018
  ensembl transcript: ENST00000238018
  gene symbol: GDA
  hgvsc: ENST00000238018.4:c.212+43G>A
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366185
  ensembl transcript: ENST00000376986
  gene symbol: GDA
  hgvsc: ENST00000376986.1:c.86+43G>A
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000436619
  ensembl transcript: ENST00000475764
  gene symbol: GDA
  hgvsc: ENST00000475764.1:c.212+43G>A
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl transcript: ENST00000477618
  gene symbol: GDA
  hgvsc: ENST00000477618.1:n.422+43G>A
  variant of: http://identifiers.org/hgnc/4212
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6864
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14114
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 17046
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15187
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3773
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1296
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 754
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1000
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 762
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1226
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4796
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1629
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2989
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1481
  bin: 9.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 265
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum

9-74810547-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74810547
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 74810547
    reference: chr 9
allele count: 3
allele frequency: 2.845651843982395e-5
allele num: 105424
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl transcript: ENST00000477618
  gene symbol: GDA
  hgvsc: ENST00000477618.1:n.422+43G>T
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000351170
  ensembl transcript: ENST00000358399
  gene symbol: GDA
  hgvsc: ENST00000358399.3:c.212+43G>T
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000436619
  ensembl transcript: ENST00000475764
  gene symbol: GDA
  hgvsc: ENST00000475764.1:c.212+43G>T
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000238018
  ensembl transcript: ENST00000238018
  gene symbol: GDA
  hgvsc: ENST00000238018.4:c.212+43G>T
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366188
  ensembl transcript: ENST00000376989
  gene symbol: GDA
  hgvsc: ENST00000376989.3:c.137+43G>T
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000437972
  ensembl transcript: ENST00000545168
  gene symbol: GDA
  hgvsc: ENST00000545168.1:c.-11+43G>T
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366185
  ensembl transcript: ENST00000376986
  gene symbol: GDA
  hgvsc: ENST00000376986.1:c.86+43G>T
  variant of: http://identifiers.org/hgnc/4212
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14114
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6864
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1296
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17046
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3773
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15187
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6806
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1226
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1000
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1629
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4057
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 754
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2989
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 280
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 667
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: Other
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum

9-74817436-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74817436
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 74817436
    reference: chr 9
allele count: 1
allele frequency: 8.887308922858158e-6
allele num: 112520
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000436619
  ensembl transcript: ENST00000475764
  gene symbol: GDA
  hgvsc: ENST00000475764.1:c.213-51G>A
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl transcript: ENST00000477618
  gene symbol: GDA
  hgvsc: ENST00000477618.1:n.521-51G>A
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000351170
  ensembl transcript: ENST00000358399
  gene symbol: GDA
  hgvsc: ENST00000358399.3:c.213-51G>A
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366185
  ensembl transcript: ENST00000376986
  gene symbol: GDA
  hgvsc: ENST00000376986.1:c.87-51G>A
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366188
  ensembl transcript: ENST00000376989
  gene symbol: GDA
  hgvsc: ENST00000376989.3:c.138-51G>A
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000437972
  ensembl transcript: ENST00000545168
  gene symbol: GDA
  hgvsc: ENST00000545168.1:c.-10-51G>A
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000238018
  ensembl transcript: ENST00000238018
  gene symbol: GDA
  hgvsc: ENST00000238018.4:c.213-51G>A
  variant of: http://identifiers.org/hgnc/4212
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7421
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2997
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 755
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9024
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5185
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3697
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1848
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 837
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3477
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7447
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9180
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1128
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5058
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2233
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1636
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1379
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 518
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2469
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4133
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3545
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1298
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 988
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD

9-74817458-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74817458
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 74817458
    reference: chr 9
allele count: 1
allele frequency: 8.788736355486809e-6
allele num: 113782
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000436619
  ensembl transcript: ENST00000475764
  gene symbol: GDA
  hgvsc: ENST00000475764.1:c.213-29A>T
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000437972
  ensembl transcript: ENST00000545168
  gene symbol: GDA
  hgvsc: ENST00000545168.1:c.-10-29A>T
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000238018
  ensembl transcript: ENST00000238018
  gene symbol: GDA
  hgvsc: ENST00000238018.4:c.213-29A>T
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl transcript: ENST00000477618
  gene symbol: GDA
  hgvsc: ENST00000477618.1:n.521-29A>T
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000351170
  ensembl transcript: ENST00000358399
  gene symbol: GDA
  hgvsc: ENST00000358399.3:c.213-29A>T
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366185
  ensembl transcript: ENST00000376986
  gene symbol: GDA
  hgvsc: ENST00000376986.1:c.87-29A>T
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366188
  ensembl transcript: ENST00000376989
  gene symbol: GDA
  hgvsc: ENST00000376989.3:c.138-29A>T
  variant of: http://identifiers.org/hgnc/4212
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5234
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1129
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1853
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7595
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1661
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9855
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9848
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3429
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13178
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3017
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 774
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 598
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2638
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5004
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4389
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3741
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20525
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11961
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: Latino
population: South Asian
reference allele: A
site quality: MQ
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum

9-74817472-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74817472
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 74817472
    reference: chr 9
allele count: 1
allele frequency: 8.594757198109153e-6
allele num: 116350
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000437972
  ensembl transcript: ENST00000545168
  gene symbol: GDA
  hgvsc: ENST00000545168.1:c.-10-15C>T
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl transcript: ENST00000477618
  gene symbol: GDA
  hgvsc: ENST00000477618.1:n.521-15C>T
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366185
  ensembl transcript: ENST00000376986
  gene symbol: GDA
  hgvsc: ENST00000376986.1:c.87-15C>T
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000238018
  ensembl transcript: ENST00000238018
  gene symbol: GDA
  hgvsc: ENST00000238018.4:c.213-15C>T
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366188
  ensembl transcript: ENST00000376989
  gene symbol: GDA
  hgvsc: ENST00000376989.3:c.138-15C>T
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000436619
  ensembl transcript: ENST00000475764
  gene symbol: GDA
  hgvsc: ENST00000475764.1:c.213-15C>T
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000351170
  ensembl transcript: ENST00000358399
  gene symbol: GDA
  hgvsc: ENST00000358399.3:c.213-15C>T
  variant of: http://identifiers.org/hgnc/4212
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7631
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10083
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10001
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14981
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3027
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1855
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5247
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1134
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2350
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4451
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2352
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 324
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4298
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Other
population: African
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: DP

9-74817473-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74817473
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 74817473
    reference: chr 9
allele count: 2
allele frequency: 1.713649216005484e-5
allele num: 116710
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366188
  ensembl transcript: ENST00000376989
  gene symbol: GDA
  hgvsc: ENST00000376989.3:c.138-14A>G
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000436619
  ensembl transcript: ENST00000475764
  gene symbol: GDA
  hgvsc: ENST00000475764.1:c.213-14A>G
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000238018
  ensembl transcript: ENST00000238018
  gene symbol: GDA
  hgvsc: ENST00000238018.4:c.213-14A>G
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl transcript: ENST00000477618
  gene symbol: GDA
  hgvsc: ENST00000477618.1:n.521-14A>G
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000437972
  ensembl transcript: ENST00000545168
  gene symbol: GDA
  hgvsc: ENST00000545168.1:c.-10-14A>G
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366185
  ensembl transcript: ENST00000376986
  gene symbol: GDA
  hgvsc: ENST00000376986.1:c.87-14A>G
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000351170
  ensembl transcript: ENST00000358399
  gene symbol: GDA
  hgvsc: ENST00000358399.3:c.213-14A>G
  variant of: http://identifiers.org/hgnc/4212
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1855
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15157
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3027
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10115
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1134
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2219
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7632
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5248
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10000
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20576
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13911
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 286
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2237
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: Other
population: South Asian
reference allele: A
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum

9-74817482-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74817482
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 74817482
    reference: chr 9
allele count: 1
allele frequency: 8.425451604205986e-6
allele num: 118688
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000351170
  ensembl transcript: ENST00000358399
  gene symbol: GDA
  hgvsc: ENST00000358399.3:c.213-5T>A
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366185
  ensembl transcript: ENST00000376986
  gene symbol: GDA
  hgvsc: ENST00000376986.1:c.87-5T>A
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000238018
  ensembl transcript: ENST00000238018
  gene symbol: GDA
  hgvsc: ENST00000238018.4:c.213-5T>A
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000437972
  ensembl transcript: ENST00000545168
  gene symbol: GDA
  hgvsc: ENST00000545168.1:c.-10-5T>A
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl transcript: ENST00000477618
  gene symbol: GDA
  hgvsc: ENST00000477618.1:n.521-5T>A
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000436619
  ensembl transcript: ENST00000475764
  gene symbol: GDA
  hgvsc: ENST00000475764.1:c.213-5T>A
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366188
  ensembl transcript: ENST00000376989
  gene symbol: GDA
  hgvsc: ENST00000376989.3:c.138-5T>A
  variant of: http://identifiers.org/hgnc/4212
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1132
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16246
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10304
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3028
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5247
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1293
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10049
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7634
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1856
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4300
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20580
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5286
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15058
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2720
  bin: 7.25e1
  variant carriers: 0
hgvs: c.213-5T>A
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: African
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD

9-74817497-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74817497
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 74817497
    reference: chr 9
allele count: 1
allele frequency: 8.306613725848521e-6
allele num: 120386
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119125
  ensembl transcript: ENST00000477618
  gene symbol: GDA
  hgvsc: ENST00000477618.1:n.531A>T
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000351170
  ensembl transcript: ENST00000358399
  gene symbol: GDA
  hgvsc: ENST00000358399.3:c.223A>T
  hgvsp: ENSP00000351170.3:p.Met75Leu
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: start_lost
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000437972
  ensembl transcript: ENST00000545168
  gene symbol: GDA
  hgvsc: ENST00000545168.1:c.1A>T
  hgvsp: ENSP00000437972.1:p.Met1?
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000436619
  ensembl transcript: ENST00000475764
  gene symbol: GDA
  hgvsc: ENST00000475764.1:c.223A>T
  hgvsp: ENSP00000436619.1:p.Met75Leu
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366185
  ensembl transcript: ENST00000376986
  gene symbol: GDA
  hgvsc: ENST00000376986.1:c.97A>T
  hgvsp: ENSP00000366185.1:p.Met33Leu
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000238018
  ensembl transcript: ENST00000238018
  gene symbol: GDA
  hgvsc: ENST00000238018.4:c.223A>T
  hgvsp: ENSP00000238018.4:p.Met75Leu
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366188
  ensembl transcript: ENST00000376989
  gene symbol: GDA
  hgvsc: ENST00000376989.3:c.148A>T
  hgvsp: ENSP00000366188.3:p.Met50Leu
  variant of: http://identifiers.org/hgnc/4212
canonical: false
consequence: start lost
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7641
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1856
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1133
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16873
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10677
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3029
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10096
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5247
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2746
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5424
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2423
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Met1?
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: Other
population: African
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum

9-74817508-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74817508
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 74817508
    reference: chr 9
allele count: 1
allele frequency: 8.269930532583527e-6
allele num: 120920
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366185
  ensembl transcript: ENST00000376986
  gene symbol: GDA
  hgvsc: ENST00000376986.1:c.108G>C
  hgvsp: ENST00000376986.1:c.108G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000351170
  ensembl transcript: ENST00000358399
  gene symbol: GDA
  hgvsc: ENST00000358399.3:c.234G>C
  hgvsp: ENST00000358399.3:c.234G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000238018
  ensembl transcript: ENST00000238018
  gene symbol: GDA
  hgvsc: ENST00000238018.4:c.234G>C
  hgvsp: ENST00000238018.4:c.234G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000436619
  ensembl transcript: ENST00000475764
  gene symbol: GDA
  hgvsc: ENST00000475764.1:c.234G>C
  hgvsp: ENST00000475764.1:c.234G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000437972
  ensembl transcript: ENST00000545168
  gene symbol: GDA
  hgvsc: ENST00000545168.1:c.12G>C
  hgvsp: ENST00000545168.1:c.12G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366188
  ensembl transcript: ENST00000376989
  gene symbol: GDA
  hgvsc: ENST00000376989.3:c.159G>C
  hgvsp: ENST00000376989.3:c.159G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119125
  ensembl transcript: ENST00000477618
  gene symbol: GDA
  hgvsc: ENST00000477618.1:n.542G>C
  variant of: http://identifiers.org/hgnc/4212
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1857
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5248
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16932
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1133
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10939
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 84
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10144
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7643
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3029
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4493
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16372
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4317
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Leu78Leu
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD

9-74817526-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74817526
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 74817526
    reference: chr 9
allele count: 1
allele frequency: 8.248375070111188e-6
allele num: 121236
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366188
  ensembl transcript: ENST00000376989
  gene symbol: GDA
  hgvsc: ENST00000376989.3:c.177T>C
  hgvsp: ENST00000376989.3:c.177T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119125
  ensembl transcript: ENST00000477618
  gene symbol: GDA
  hgvsc: ENST00000477618.1:n.560T>C
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366185
  ensembl transcript: ENST00000376986
  gene symbol: GDA
  hgvsc: ENST00000376986.1:c.126T>C
  hgvsp: ENST00000376986.1:c.126T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000351170
  ensembl transcript: ENST00000358399
  gene symbol: GDA
  hgvsc: ENST00000358399.3:c.252T>C
  hgvsp: ENST00000358399.3:c.252T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000437972
  ensembl transcript: ENST00000545168
  gene symbol: GDA
  hgvsc: ENST00000545168.1:c.30T>C
  hgvsp: ENST00000545168.1:c.30T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000238018
  ensembl transcript: ENST00000238018
  gene symbol: GDA
  hgvsc: ENST00000238018.4:c.252T>C
  hgvsp: ENST00000238018.4:c.252T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000436619
  ensembl transcript: ENST00000475764
  gene symbol: GDA
  hgvsc: ENST00000475764.1:c.252T>C
  hgvsp: ENST00000475764.1:c.252T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4212
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11163
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1857
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3031
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7640
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16896
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 86
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5252
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10167
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1133
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2421
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5486
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4308
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 4.75e1
  variant carriers: 0
hgvs: p.His84His
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: T
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum

9-74817529-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74817529
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 74817529
    reference: chr 9
allele count: 1
allele frequency: 8.246606521416436e-6
allele num: 121262
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119125
  ensembl transcript: ENST00000477618
  gene symbol: GDA
  hgvsc: ENST00000477618.1:n.563C>T
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366185
  ensembl transcript: ENST00000376986
  gene symbol: GDA
  hgvsc: ENST00000376986.1:c.129C>T
  hgvsp: ENST00000376986.1:c.129C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000437972
  ensembl transcript: ENST00000545168
  gene symbol: GDA
  hgvsc: ENST00000545168.1:c.33C>T
  hgvsp: ENST00000545168.1:c.33C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366188
  ensembl transcript: ENST00000376989
  gene symbol: GDA
  hgvsc: ENST00000376989.3:c.180C>T
  hgvsp: ENST00000376989.3:c.180C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000436619
  ensembl transcript: ENST00000475764
  gene symbol: GDA
  hgvsc: ENST00000475764.1:c.255C>T
  hgvsp: ENST00000475764.1:c.255C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000351170
  ensembl transcript: ENST00000358399
  gene symbol: GDA
  hgvsc: ENST00000358399.3:c.255C>T
  hgvsp: ENST00000358399.3:c.255C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000238018
  ensembl transcript: ENST00000238018
  gene symbol: GDA
  hgvsc: ENST00000238018.4:c.255C>T
  hgvsp: ENST00000238018.4:c.255C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4212
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5250
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11187
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1133
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16887
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7641
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10176
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1858
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3031
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5485
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2419
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20588
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ala85Ala
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: Other
population: Latino
reference allele: C
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD

9-74817549-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74817549
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 74817549
    reference: chr 9
allele count: 1
allele frequency: 8.240490473993011e-6
allele num: 121352
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000238018
  ensembl transcript: ENST00000238018
  gene symbol: GDA
  hgvsc: ENST00000238018.4:c.275G>A
  hgvsp: ENSP00000238018.4:p.Gly92Glu
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366188
  ensembl transcript: ENST00000376989
  gene symbol: GDA
  hgvsc: ENST00000376989.3:c.200G>A
  hgvsp: ENSP00000366188.3:p.Gly67Glu
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119125
  ensembl transcript: ENST00000477618
  gene symbol: GDA
  hgvsc: ENST00000477618.1:n.583G>A
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000351170
  ensembl transcript: ENST00000358399
  gene symbol: GDA
  hgvsc: ENST00000358399.3:c.275G>A
  hgvsp: ENSP00000351170.3:p.Gly92Glu
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000437972
  ensembl transcript: ENST00000545168
  gene symbol: GDA
  hgvsc: ENST00000545168.1:c.53G>A
  hgvsp: ENSP00000437972.1:p.Gly18Glu
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366185
  ensembl transcript: ENST00000376986
  gene symbol: GDA
  hgvsc: ENST00000376986.1:c.149G>A
  hgvsp: ENSP00000366185.1:p.Gly50Glu
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000436619
  ensembl transcript: ENST00000475764
  gene symbol: GDA
  hgvsc: ENST00000475764.1:c.275G>A
  hgvsp: ENSP00000436619.1:p.Gly92Glu
  variant of: http://identifiers.org/hgnc/4212
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7647
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10191
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1133
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16886
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3031
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 757
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5247
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11256
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1857
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2422
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Gly92Glu
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: Latino
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD

9-74817556-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74817556
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 74817556
    reference: chr 9
allele count: 1
allele frequency: 8.251505899826718e-6
allele num: 121190
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000351170
  ensembl transcript: ENST00000358399
  gene symbol: GDA
  hgvsc: ENST00000358399.3:c.282C>T
  hgvsp: ENST00000358399.3:c.282C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000437972
  ensembl transcript: ENST00000545168
  gene symbol: GDA
  hgvsc: ENST00000545168.1:c.60C>T
  hgvsp: ENST00000545168.1:c.60C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366188
  ensembl transcript: ENST00000376989
  gene symbol: GDA
  hgvsc: ENST00000376989.3:c.207C>T
  hgvsp: ENST00000376989.3:c.207C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119125
  ensembl transcript: ENST00000477618
  gene symbol: GDA
  hgvsc: ENST00000477618.1:n.590C>T
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000238018
  ensembl transcript: ENST00000238018
  gene symbol: GDA
  hgvsc: ENST00000238018.4:c.282C>T
  hgvsp: ENST00000238018.4:c.282C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366185
  ensembl transcript: ENST00000376986
  gene symbol: GDA
  hgvsc: ENST00000376986.1:c.156C>T
  hgvsp: ENST00000376986.1:c.156C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000436619
  ensembl transcript: ENST00000475764
  gene symbol: GDA
  hgvsc: ENST00000475764.1:c.282C>T
  hgvsp: ENST00000475764.1:c.282C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4212
canonical: true
consequence: synonymous
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7624
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3016
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11251
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 931
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16855
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 746
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10161
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5236
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 363
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1845
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16764
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2415
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3776
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2756
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5481
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ser94Ser
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: ReadPosRankSum

9-74817557-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74817557
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 74817557
    reference: chr 9
allele count: 2
allele frequency: 1.651309488424321e-5
allele num: 121116
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000351170
  ensembl transcript: ENST00000358399
  gene symbol: GDA
  hgvsc: ENST00000358399.3:c.283A>G
  hgvsp: ENSP00000351170.3:p.Ile95Val
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000437972
  ensembl transcript: ENST00000545168
  gene symbol: GDA
  hgvsc: ENST00000545168.1:c.61A>G
  hgvsp: ENSP00000437972.1:p.Ile21Val
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366188
  ensembl transcript: ENST00000376989
  gene symbol: GDA
  hgvsc: ENST00000376989.3:c.208A>G
  hgvsp: ENSP00000366188.3:p.Ile70Val
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366185
  ensembl transcript: ENST00000376986
  gene symbol: GDA
  hgvsc: ENST00000376986.1:c.157A>G
  hgvsp: ENSP00000366185.1:p.Ile53Val
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119125
  ensembl transcript: ENST00000477618
  gene symbol: GDA
  hgvsc: ENST00000477618.1:n.591A>G
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000238018
  ensembl transcript: ENST00000238018
  gene symbol: GDA
  hgvsc: ENST00000238018.4:c.283A>G
  hgvsp: ENSP00000238018.4:p.Ile95Val
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000436619
  ensembl transcript: ENST00000475764
  gene symbol: GDA
  hgvsc: ENST00000475764.1:c.283A>G
  hgvsp: ENSP00000436619.1:p.Ile95Val
  variant of: http://identifiers.org/hgnc/4212
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1124
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11252
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3010
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7618
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5233
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 364
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16841
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10154
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1841
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2753
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 58
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5477
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2408
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ile95Val
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: Other
population: East Asian
reference allele: A
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD

9-74817558-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74817558
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 74817558
    reference: chr 9
allele count: 1
allele frequency: 8.261458643138033e-6
allele num: 121044
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000437972
  ensembl transcript: ENST00000545168
  gene symbol: GDA
  hgvsc: ENST00000545168.1:c.62T>G
  hgvsp: ENSP00000437972.1:p.Ile21Arg
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000436619
  ensembl transcript: ENST00000475764
  gene symbol: GDA
  hgvsc: ENST00000475764.1:c.284T>G
  hgvsp: ENSP00000436619.1:p.Ile95Arg
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000238018
  ensembl transcript: ENST00000238018
  gene symbol: GDA
  hgvsc: ENST00000238018.4:c.284T>G
  hgvsp: ENSP00000238018.4:p.Ile95Arg
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366185
  ensembl transcript: ENST00000376986
  gene symbol: GDA
  hgvsc: ENST00000376986.1:c.158T>G
  hgvsp: ENSP00000366185.1:p.Ile53Arg
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000351170
  ensembl transcript: ENST00000358399
  gene symbol: GDA
  hgvsc: ENST00000358399.3:c.284T>G
  hgvsp: ENSP00000351170.3:p.Ile95Arg
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119125
  ensembl transcript: ENST00000477618
  gene symbol: GDA
  hgvsc: ENST00000477618.1:n.592T>G
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366188
  ensembl transcript: ENST00000376989
  gene symbol: GDA
  hgvsc: ENST00000376989.3:c.209T>G
  hgvsp: ENSP00000366188.3:p.Ile70Arg
  variant of: http://identifiers.org/hgnc/4212
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1124
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7613
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1838
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3005
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10144
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11236
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16799
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5227
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1045
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4472
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 102
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5468
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2750
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16701
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ile95Arg
num of homozygotes: 0
population: East Asian
population: South Asian
population: Other
population: African
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP

http://identifiers.org/exac.variant/9-74817559-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74817559
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 74817559
    reference: chr 9
allele count: 1
allele frequency: 8.261731658955718e-6
allele num: 121040
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000436619
  ensembl transcript: ENST00000475764
  gene symbol: GDA
  hgvsc: ENST00000475764.1:c.285A>C
  hgvsp: ENST00000475764.1:c.285A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000351170
  ensembl transcript: ENST00000358399
  gene symbol: GDA
  hgvsc: ENST00000358399.3:c.285A>C
  hgvsp: ENST00000358399.3:c.285A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119125
  ensembl transcript: ENST00000477618
  gene symbol: GDA
  hgvsc: ENST00000477618.1:n.593A>C
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366185
  ensembl transcript: ENST00000376986
  gene symbol: GDA
  hgvsc: ENST00000376986.1:c.159A>C
  hgvsp: ENST00000376986.1:c.159A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366188
  ensembl transcript: ENST00000376989
  gene symbol: GDA
  hgvsc: ENST00000376989.3:c.210A>C
  hgvsp: ENST00000376989.3:c.210A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000437972
  ensembl transcript: ENST00000545168
  gene symbol: GDA
  hgvsc: ENST00000545168.1:c.63A>C
  hgvsp: ENST00000545168.1:c.63A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000238018
  ensembl transcript: ENST00000238018
  gene symbol: GDA
  hgvsc: ENST00000238018.4:c.285A>C
  hgvsp: ENST00000238018.4:c.285A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/4212
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3005
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7611
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1838
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16801
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1053
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5225
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10142
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11237
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1123
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4472
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2407
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3768
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Ile95Ile
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: Other
reference allele: A
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD

9-74817560-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74817560
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 74817560
    reference: chr 9
allele count: 8
allele frequency: 6.613975329872019e-5
allele num: 120956
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366188
  ensembl transcript: ENST00000376989
  gene symbol: GDA
  hgvsc: ENST00000376989.3:c.211G>C
  hgvsp: ENSP00000366188.3:p.Asp71His
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000351170
  ensembl transcript: ENST00000358399
  gene symbol: GDA
  hgvsc: ENST00000358399.3:c.286G>C
  hgvsp: ENSP00000351170.3:p.Asp96His
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366185
  ensembl transcript: ENST00000376986
  gene symbol: GDA
  hgvsc: ENST00000376986.1:c.160G>C
  hgvsp: ENSP00000366185.1:p.Asp54His
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000238018
  ensembl transcript: ENST00000238018
  gene symbol: GDA
  hgvsc: ENST00000238018.4:c.286G>C
  hgvsp: ENSP00000238018.4:p.Asp96His
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000437972
  ensembl transcript: ENST00000545168
  gene symbol: GDA
  hgvsc: ENST00000545168.1:c.64G>C
  hgvsp: ENSP00000437972.1:p.Asp22His
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119125
  ensembl transcript: ENST00000477618
  gene symbol: GDA
  hgvsc: ENST00000477618.1:n.594G>C
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000436619
  ensembl transcript: ENST00000475764
  gene symbol: GDA
  hgvsc: ENST00000475764.1:c.286G>C
  hgvsp: ENSP00000436619.1:p.Asp96His
  variant of: http://identifiers.org/hgnc/4212
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.95to100.00
genotype depth: GenotypeDepth
  all individuals: 11229
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16782
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5217
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7611
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10137
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1834
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1116
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3000
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1102
  bin: 9.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4290
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2404
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Asp96His
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff

9-74817560-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74817560
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 74817560
    reference: chr 9
allele count: 1
allele frequency: 8.267469162340024e-6
allele num: 120956
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000437972
  ensembl transcript: ENST00000545168
  gene symbol: GDA
  hgvsc: ENST00000545168.1:c.64G>T
  hgvsp: ENSP00000437972.1:p.Asp22Tyr
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119125
  ensembl transcript: ENST00000477618
  gene symbol: GDA
  hgvsc: ENST00000477618.1:n.594G>T
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366188
  ensembl transcript: ENST00000376989
  gene symbol: GDA
  hgvsc: ENST00000376989.3:c.211G>T
  hgvsp: ENSP00000366188.3:p.Asp71Tyr
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366185
  ensembl transcript: ENST00000376986
  gene symbol: GDA
  hgvsc: ENST00000376986.1:c.160G>T
  hgvsp: ENSP00000366185.1:p.Asp54Tyr
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000436619
  ensembl transcript: ENST00000475764
  gene symbol: GDA
  hgvsc: ENST00000475764.1:c.286G>T
  hgvsp: ENSP00000436619.1:p.Asp96Tyr
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000238018
  ensembl transcript: ENST00000238018
  gene symbol: GDA
  hgvsc: ENST00000238018.4:c.286G>T
  hgvsp: ENSP00000238018.4:p.Asp96Tyr
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000351170
  ensembl transcript: ENST00000358399
  gene symbol: GDA
  hgvsc: ENST00000358399.3:c.286G>T
  hgvsp: ENSP00000351170.3:p.Asp96Tyr
  variant of: http://identifiers.org/hgnc/4212
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.95to100.00
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7611
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 366
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 741
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10137
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1834
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5217
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11229
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3000
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16782
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1102
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1116
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4290
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16669
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 114
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Asp96Tyr
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
reference allele: G
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum

http://identifiers.org/exac.variant/9-74817561-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74817561
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 74817561
    reference: chr 9
allele count: 542
allele frequency: 4.626705137179246e-3
allele num: 117146
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000436619
  ensembl transcript: ENST00000475764
  gene symbol: GDA
  hgvsc: ENST00000475764.1:c.287A>C
  hgvsp: ENSP00000436619.1:p.Asp96Ala
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366185
  ensembl transcript: ENST00000376986
  gene symbol: GDA
  hgvsc: ENST00000376986.1:c.161A>C
  hgvsp: ENSP00000366185.1:p.Asp54Ala
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366188
  ensembl transcript: ENST00000376989
  gene symbol: GDA
  hgvsc: ENST00000376989.3:c.212A>C
  hgvsp: ENSP00000366188.3:p.Asp71Ala
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000351170
  ensembl transcript: ENST00000358399
  gene symbol: GDA
  hgvsc: ENST00000358399.3:c.287A>C
  hgvsp: ENSP00000351170.3:p.Asp96Ala
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000238018
  ensembl transcript: ENST00000238018
  gene symbol: GDA
  hgvsc: ENST00000238018.4:c.287A>C
  hgvsp: ENSP00000238018.4:p.Asp96Ala
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119125
  ensembl transcript: ENST00000477618
  gene symbol: GDA
  hgvsc: ENST00000477618.1:n.595A>C
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000437972
  ensembl transcript: ENST00000545168
  gene symbol: GDA
  hgvsc: ENST00000545168.1:c.65A>C
  hgvsp: ENSP00000437972.1:p.Asp22Ala
  variant of: http://identifiers.org/hgnc/4212
canonical: true
consequence: missense
filter: VQSRTrancheINDEL99.95to100.00
genotype depth: GenotypeDepth
  all individuals: 16008
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2729
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4125
  bin: 9.75e1
  variant carriers: 559
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 8.75e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 8.25e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 9.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9565
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10674
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1664
  bin: 5.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 6.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 7.75e1
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 7128
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 969
  bin: 5.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 673
  bin: 6.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4825
  bin: 4.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 1.25e1
  variant carriers: 32
genotype quality: GenotypeQuality
  all individuals: 299
  bin: 5.75e1
  variant carriers: 17
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 2.75e1
  variant carriers: 35
genotype quality: GenotypeQuality
  all individuals: 257
  bin: 3.75e1
  variant carriers: 25
genotype quality: GenotypeQuality
  all individuals: 1532
  bin: 2.5e0
  variant carriers: 15
genotype quality: GenotypeQuality
  all individuals: 4215
  bin: 7.75e1
  variant carriers: 22
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 3.25e1
  variant carriers: 22
genotype quality: GenotypeQuality
  all individuals: 250
  bin: 2.25e1
  variant carriers: 23
genotype quality: GenotypeQuality
  all individuals: 4053
  bin: 8.25e1
  variant carriers: 14
hgvs: p.Asp96Ala
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: A
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum

9-74817562-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74817562
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 74817562
    reference: chr 9
allele count: 1
allele frequency: 8.243887157672586e-6
allele num: 121302
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366185
  ensembl transcript: ENST00000376986
  gene symbol: GDA
  hgvsc: ENST00000376986.1:c.162C>T
  hgvsp: ENST00000376986.1:c.162C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366188
  ensembl transcript: ENST00000376989
  gene symbol: GDA
  hgvsc: ENST00000376989.3:c.213C>T
  hgvsp: ENST00000376989.3:c.213C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000436619
  ensembl transcript: ENST00000475764
  gene symbol: GDA
  hgvsc: ENST00000475764.1:c.288C>T
  hgvsp: ENST00000475764.1:c.288C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000437972
  ensembl transcript: ENST00000545168
  gene symbol: GDA
  hgvsc: ENST00000545168.1:c.66C>T
  hgvsp: ENST00000545168.1:c.66C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000351170
  ensembl transcript: ENST00000358399
  gene symbol: GDA
  hgvsc: ENST00000358399.3:c.288C>T
  hgvsp: ENST00000358399.3:c.288C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000238018
  ensembl transcript: ENST00000238018
  gene symbol: GDA
  hgvsc: ENST00000238018.4:c.288C>T
  hgvsp: ENST00000238018.4:c.288C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119125
  ensembl transcript: ENST00000477618
  gene symbol: GDA
  hgvsc: ENST00000477618.1:n.596C>T
  variant of: http://identifiers.org/hgnc/4212
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16062
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7172
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 559
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10858
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2564
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1109
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9632
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 483
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1754
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 802
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4884
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 563
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2819
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4246
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2633
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2288
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Asp96Asp
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum

http://identifiers.org/exac.variant/9-74817567-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74817567
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 74817567
    reference: chr 9
allele count: 1
allele frequency: 8.2387253044209e-6
allele num: 121378
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000238018
  ensembl transcript: ENST00000238018
  gene symbol: GDA
  hgvsc: ENST00000238018.4:c.293C>A
  hgvsp: ENSP00000238018.4:p.Pro98Gln
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000351170
  ensembl transcript: ENST00000358399
  gene symbol: GDA
  hgvsc: ENST00000358399.3:c.293C>A
  hgvsp: ENSP00000351170.3:p.Pro98Gln
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366185
  ensembl transcript: ENST00000376986
  gene symbol: GDA
  hgvsc: ENST00000376986.1:c.167C>A
  hgvsp: ENSP00000366185.1:p.Pro56Gln
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000437972
  ensembl transcript: ENST00000545168
  gene symbol: GDA
  hgvsc: ENST00000545168.1:c.71C>A
  hgvsp: ENSP00000437972.1:p.Pro24Gln
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000436619
  ensembl transcript: ENST00000475764
  gene symbol: GDA
  hgvsc: ENST00000475764.1:c.293C>A
  hgvsp: ENSP00000436619.1:p.Pro98Gln
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119125
  ensembl transcript: ENST00000477618
  gene symbol: GDA
  hgvsc: ENST00000477618.1:n.601C>A
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366188
  ensembl transcript: ENST00000376989
  gene symbol: GDA
  hgvsc: ENST00000376989.3:c.218C>A
  hgvsp: ENSP00000366188.3:p.Pro73Gln
  variant of: http://identifiers.org/hgnc/4212
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2823
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4893
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7186
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16072
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1115
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 803
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9642
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1756
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2519
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10854
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4116
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5285
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3591
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4248
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Pro98Gln
num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP

9-74817567-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74817567
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 74817567
    reference: chr 9
allele count: 1
allele frequency: 8.2387253044209e-6
allele num: 121378
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000351170
  ensembl transcript: ENST00000358399
  gene symbol: GDA
  hgvsc: ENST00000358399.3:c.293C>T
  hgvsp: ENSP00000351170.3:p.Pro98Leu
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000238018
  ensembl transcript: ENST00000238018
  gene symbol: GDA
  hgvsc: ENST00000238018.4:c.293C>T
  hgvsp: ENSP00000238018.4:p.Pro98Leu
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119125
  ensembl transcript: ENST00000477618
  gene symbol: GDA
  hgvsc: ENST00000477618.1:n.601C>T
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366188
  ensembl transcript: ENST00000376989
  gene symbol: GDA
  hgvsc: ENST00000376989.3:c.218C>T
  hgvsp: ENSP00000366188.3:p.Pro73Leu
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000437972
  ensembl transcript: ENST00000545168
  gene symbol: GDA
  hgvsc: ENST00000545168.1:c.71C>T
  hgvsp: ENSP00000437972.1:p.Pro24Leu
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000436619
  ensembl transcript: ENST00000475764
  gene symbol: GDA
  hgvsc: ENST00000475764.1:c.293C>T
  hgvsp: ENSP00000436619.1:p.Pro98Leu
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366185
  ensembl transcript: ENST00000376986
  gene symbol: GDA
  hgvsc: ENST00000376986.1:c.167C>T
  hgvsp: ENSP00000366185.1:p.Pro56Leu
  variant of: http://identifiers.org/hgnc/4212
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1756
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16072
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10854
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9642
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 803
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1115
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2519
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7186
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4893
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2823
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4116
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5285
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Pro98Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: South Asian
population: East Asian
population: Latino
reference allele: C
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP

9-74817569-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74817569
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 74817569
    reference: chr 9
allele count: 1
allele frequency: 8.237910865804433e-6
allele num: 121390
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000437972
  ensembl transcript: ENST00000545168
  gene symbol: GDA
  hgvsc: ENST00000545168.1:c.73C>T
  hgvsp: ENSP00000437972.1:p.Leu25Phe
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366185
  ensembl transcript: ENST00000376986
  gene symbol: GDA
  hgvsc: ENST00000376986.1:c.169C>T
  hgvsp: ENSP00000366185.1:p.Leu57Phe
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000436619
  ensembl transcript: ENST00000475764
  gene symbol: GDA
  hgvsc: ENST00000475764.1:c.295C>T
  hgvsp: ENSP00000436619.1:p.Leu99Phe
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000351170
  ensembl transcript: ENST00000358399
  gene symbol: GDA
  hgvsc: ENST00000358399.3:c.295C>T
  hgvsp: ENSP00000351170.3:p.Leu99Phe
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366188
  ensembl transcript: ENST00000376989
  gene symbol: GDA
  hgvsc: ENST00000376989.3:c.220C>T
  hgvsp: ENSP00000366188.3:p.Leu74Phe
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119125
  ensembl transcript: ENST00000477618
  gene symbol: GDA
  hgvsc: ENST00000477618.1:n.603C>T
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000238018
  ensembl transcript: ENST00000238018
  gene symbol: GDA
  hgvsc: ENST00000238018.4:c.295C>T
  hgvsp: ENSP00000238018.4:p.Leu99Phe
  variant of: http://identifiers.org/hgnc/4212
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 7186
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10859
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 803
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2519
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1114
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9641
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16068
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4893
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2823
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1756
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3591
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22208
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4250
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Leu99Phe
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum

9-74817573-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74817573
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 74817573
    reference: chr 9
allele count: 1
allele frequency: 8.237910865804433e-6
allele num: 121390
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000437972
  ensembl transcript: ENST00000545168
  gene symbol: GDA
  hgvsc: ENST00000545168.1:c.77T>C
  hgvsp: ENSP00000437972.1:p.Leu26Ser
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000351170
  ensembl transcript: ENST00000358399
  gene symbol: GDA
  hgvsc: ENST00000358399.3:c.299T>C
  hgvsp: ENSP00000351170.3:p.Leu100Ser
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366185
  ensembl transcript: ENST00000376986
  gene symbol: GDA
  hgvsc: ENST00000376986.1:c.173T>C
  hgvsp: ENSP00000366185.1:p.Leu58Ser
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000238018
  ensembl transcript: ENST00000238018
  gene symbol: GDA
  hgvsc: ENST00000238018.4:c.299T>C
  hgvsp: ENSP00000238018.4:p.Leu100Ser
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119125
  ensembl transcript: ENST00000477618
  gene symbol: GDA
  hgvsc: ENST00000477618.1:n.607T>C
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366188
  ensembl transcript: ENST00000376989
  gene symbol: GDA
  hgvsc: ENST00000376989.3:c.224T>C
  hgvsp: ENSP00000366188.3:p.Leu75Ser
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000436619
  ensembl transcript: ENST00000475764
  gene symbol: GDA
  hgvsc: ENST00000475764.1:c.299T>C
  hgvsp: ENSP00000436619.1:p.Leu100Ser
  variant of: http://identifiers.org/hgnc/4212
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4892
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1756
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16072
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10861
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2823
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2519
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9641
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1114
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7188
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 803
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 562
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4249
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2289
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Leu100Ser
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
reference allele: T
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP

9-74817584-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74817584
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 74817584
    reference: chr 9
allele count: 19
allele frequency: 1.566984462111965e-4
allele num: 121252
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000437972
  ensembl transcript: ENST00000545168
  gene symbol: GDA
  hgvsc: ENST00000545168.1:c.88A>G
  hgvsp: ENSP00000437972.1:p.Thr30Ala
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000436619
  ensembl transcript: ENST00000475764
  gene symbol: GDA
  hgvsc: ENST00000475764.1:c.310A>G
  hgvsp: ENSP00000436619.1:p.Thr104Ala
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366188
  ensembl transcript: ENST00000376989
  gene symbol: GDA
  hgvsc: ENST00000376989.3:c.235A>G
  hgvsp: ENSP00000366188.3:p.Thr79Ala
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000351170
  ensembl transcript: ENST00000358399
  gene symbol: GDA
  hgvsc: ENST00000358399.3:c.310A>G
  hgvsp: ENSP00000351170.3:p.Thr104Ala
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366185
  ensembl transcript: ENST00000376986
  gene symbol: GDA
  hgvsc: ENST00000376986.1:c.184A>G
  hgvsp: ENSP00000366185.1:p.Thr62Ala
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000238018
  ensembl transcript: ENST00000238018
  gene symbol: GDA
  hgvsc: ENST00000238018.4:c.310A>G
  hgvsp: ENSP00000238018.4:p.Thr104Ala
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119125
  ensembl transcript: ENST00000477618
  gene symbol: GDA
  hgvsc: ENST00000477618.1:n.618A>G
  variant of: http://identifiers.org/hgnc/4212
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.90to99.95
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10855
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7179
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4893
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9639
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1753
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2639
  bin: 9.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16054
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1107
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2821
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22044
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 3.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 3594
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 2.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2650
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4253
  bin: 7.75e1
  variant carriers: 2
hgvs: p.Thr104Ala
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
reference allele: A
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD

9-74817586-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74817586
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 74817586
    reference: chr 9
allele count: 7
allele frequency: 5.76672762921589e-5
allele num: 121386
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000238018
  ensembl transcript: ENST00000238018
  gene symbol: GDA
  hgvsc: ENST00000238018.4:c.312C>G
  hgvsp: ENST00000238018.4:c.312C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119125
  ensembl transcript: ENST00000477618
  gene symbol: GDA
  hgvsc: ENST00000477618.1:n.620C>G
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000351170
  ensembl transcript: ENST00000358399
  gene symbol: GDA
  hgvsc: ENST00000358399.3:c.312C>G
  hgvsp: ENST00000358399.3:c.312C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366188
  ensembl transcript: ENST00000376989
  gene symbol: GDA
  hgvsc: ENST00000376989.3:c.237C>G
  hgvsp: ENST00000376989.3:c.237C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366185
  ensembl transcript: ENST00000376986
  gene symbol: GDA
  hgvsc: ENST00000376986.1:c.186C>G
  hgvsp: ENST00000376986.1:c.186C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000436619
  ensembl transcript: ENST00000475764
  gene symbol: GDA
  hgvsc: ENST00000475764.1:c.312C>G
  hgvsp: ENST00000475764.1:c.312C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000437972
  ensembl transcript: ENST00000545168
  gene symbol: GDA
  hgvsc: ENST00000545168.1:c.90C>G
  hgvsp: ENST00000545168.1:c.90C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4212
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16051
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9638
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1757
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2823
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7180
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4893
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1110
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10856
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2619
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 801
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2288
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4119
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3591
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Thr104Thr
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: DP

9-74817586-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74817586
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 74817586
    reference: chr 9
allele count: 9
allele frequency: 7.414364094706144e-5
allele num: 121386
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366188
  ensembl transcript: ENST00000376989
  gene symbol: GDA
  hgvsc: ENST00000376989.3:c.237C>T
  hgvsp: ENST00000376989.3:c.237C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000351170
  ensembl transcript: ENST00000358399
  gene symbol: GDA
  hgvsc: ENST00000358399.3:c.312C>T
  hgvsp: ENST00000358399.3:c.312C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000436619
  ensembl transcript: ENST00000475764
  gene symbol: GDA
  hgvsc: ENST00000475764.1:c.312C>T
  hgvsp: ENST00000475764.1:c.312C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000238018
  ensembl transcript: ENST00000238018
  gene symbol: GDA
  hgvsc: ENST00000238018.4:c.312C>T
  hgvsp: ENST00000238018.4:c.312C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366185
  ensembl transcript: ENST00000376986
  gene symbol: GDA
  hgvsc: ENST00000376986.1:c.186C>T
  hgvsp: ENST00000376986.1:c.186C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000437972
  ensembl transcript: ENST00000545168
  gene symbol: GDA
  hgvsc: ENST00000545168.1:c.90C>T
  hgvsp: ENST00000545168.1:c.90C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119125
  ensembl transcript: ENST00000477618
  gene symbol: GDA
  hgvsc: ENST00000477618.1:n.620C>T
  variant of: http://identifiers.org/hgnc/4212
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1757
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4893
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16051
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10856
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2619
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2823
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9638
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 801
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1110
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7180
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5286
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16266
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4243
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2288
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Thr104Thr
num of homozygotes: 0
population: East Asian
population: South Asian
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD

9-74817589-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74817589
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 74817589
    reference: chr 9
allele count: 1
allele frequency: 8.238046594391538e-6
allele num: 121388
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000238018
  ensembl transcript: ENST00000238018
  gene symbol: GDA
  hgvsc: ENST00000238018.4:c.315G>A
  hgvsp: ENST00000238018.4:c.315G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119125
  ensembl transcript: ENST00000477618
  gene symbol: GDA
  hgvsc: ENST00000477618.1:n.623G>A
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000351170
  ensembl transcript: ENST00000358399
  gene symbol: GDA
  hgvsc: ENST00000358399.3:c.315G>A
  hgvsp: ENST00000358399.3:c.315G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000437972
  ensembl transcript: ENST00000545168
  gene symbol: GDA
  hgvsc: ENST00000545168.1:c.93G>A
  hgvsp: ENST00000545168.1:c.93G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366188
  ensembl transcript: ENST00000376989
  gene symbol: GDA
  hgvsc: ENST00000376989.3:c.240G>A
  hgvsp: ENST00000376989.3:c.240G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000436619
  ensembl transcript: ENST00000475764
  gene symbol: GDA
  hgvsc: ENST00000475764.1:c.315G>A
  hgvsp: ENST00000475764.1:c.315G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366185
  ensembl transcript: ENST00000376986
  gene symbol: GDA
  hgvsc: ENST00000376986.1:c.189G>A
  hgvsp: ENST00000376986.1:c.189G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/4212
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9640
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4893
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7180
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16048
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10858
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2822
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2615
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1109
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1757
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3591
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5288
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2648
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4118
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Lys105Lys
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff

9-74817594-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74817594
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 74817594
    reference: chr 9
allele count: 1
allele frequency: 8.238046594391538e-6
allele num: 121388
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000436619
  ensembl transcript: ENST00000475764
  gene symbol: GDA
  hgvsc: ENST00000475764.1:c.320C>T
  hgvsp: ENSP00000436619.1:p.Thr107Ile
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000351170
  ensembl transcript: ENST00000358399
  gene symbol: GDA
  hgvsc: ENST00000358399.3:c.320C>T
  hgvsp: ENSP00000351170.3:p.Thr107Ile
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000437972
  ensembl transcript: ENST00000545168
  gene symbol: GDA
  hgvsc: ENST00000545168.1:c.98C>T
  hgvsp: ENSP00000437972.1:p.Thr33Ile
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000238018
  ensembl transcript: ENST00000238018
  gene symbol: GDA
  hgvsc: ENST00000238018.4:c.320C>T
  hgvsp: ENSP00000238018.4:p.Thr107Ile
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119125
  ensembl transcript: ENST00000477618
  gene symbol: GDA
  hgvsc: ENST00000477618.1:n.628C>T
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366185
  ensembl transcript: ENST00000376986
  gene symbol: GDA
  hgvsc: ENST00000376986.1:c.194C>T
  hgvsp: ENSP00000366185.1:p.Thr65Ile
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366188
  ensembl transcript: ENST00000376989
  gene symbol: GDA
  hgvsc: ENST00000376989.3:c.245C>T
  hgvsp: ENSP00000366188.3:p.Thr82Ile
  variant of: http://identifiers.org/hgnc/4212
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4894
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1757
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2822
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9642
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2615
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16045
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10856
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7180
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1109
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5289
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4118
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2649
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2288
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Thr107Ile
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
population: African
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD

9-74817599-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74817599
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 74817599
    reference: chr 9
allele count: 5
allele frequency: 4.11936265221045e-5
allele num: 121378
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000238018
  ensembl transcript: ENST00000238018
  gene symbol: GDA
  hgvsc: ENST00000238018.4:c.325C>T
  hgvsp: ENSP00000238018.4:p.Pro109Ser
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119125
  ensembl transcript: ENST00000477618
  gene symbol: GDA
  hgvsc: ENST00000477618.1:n.633C>T
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366188
  ensembl transcript: ENST00000376989
  gene symbol: GDA
  hgvsc: ENST00000376989.3:c.250C>T
  hgvsp: ENSP00000366188.3:p.Pro84Ser
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366185
  ensembl transcript: ENST00000376986
  gene symbol: GDA
  hgvsc: ENST00000376986.1:c.199C>T
  hgvsp: ENSP00000366185.1:p.Pro67Ser
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000351170
  ensembl transcript: ENST00000358399
  gene symbol: GDA
  hgvsc: ENST00000358399.3:c.325C>T
  hgvsp: ENSP00000351170.3:p.Pro109Ser
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000436619
  ensembl transcript: ENST00000475764
  gene symbol: GDA
  hgvsc: ENST00000475764.1:c.325C>T
  hgvsp: ENSP00000436619.1:p.Pro109Ser
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000437972
  ensembl transcript: ENST00000545168
  gene symbol: GDA
  hgvsc: ENST00000545168.1:c.103C>T
  hgvsp: ENSP00000437972.1:p.Pro35Ser
  variant of: http://identifiers.org/hgnc/4212
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10855
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16041
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4892
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1109
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9640
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2821
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7180
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 600
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1757
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2619
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3591
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2647
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4240
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5287
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Pro109Ser
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: C
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum

http://identifiers.org/exac.variant/9-74817616-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74817616
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 74817616
    reference: chr 9
allele count: 1
allele frequency: 8.242528148233626e-6
allele num: 121322
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366185
  ensembl transcript: ENST00000376986
  gene symbol: GDA
  hgvsc: ENST00000376986.1:c.216C>A
  hgvsp: ENSP00000366185.1:p.Phe72Leu
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000351170
  ensembl transcript: ENST00000358399
  gene symbol: GDA
  hgvsc: ENST00000358399.3:c.342C>A
  hgvsp: ENSP00000351170.3:p.Phe114Leu
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000437972
  ensembl transcript: ENST00000545168
  gene symbol: GDA
  hgvsc: ENST00000545168.1:c.120C>A
  hgvsp: ENSP00000437972.1:p.Phe40Leu
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366188
  ensembl transcript: ENST00000376989
  gene symbol: GDA
  hgvsc: ENST00000376989.3:c.267C>A
  hgvsp: ENSP00000366188.3:p.Phe89Leu
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000436619
  ensembl transcript: ENST00000475764
  gene symbol: GDA
  hgvsc: ENST00000475764.1:c.342C>A
  hgvsp: ENSP00000436619.1:p.Phe114Leu
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119125
  ensembl transcript: ENST00000477618
  gene symbol: GDA
  hgvsc: ENST00000477618.1:n.650C>A
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000238018
  ensembl transcript: ENST00000238018
  gene symbol: GDA
  hgvsc: ENST00000238018.4:c.342C>A
  hgvsp: ENSP00000238018.4:p.Phe114Leu
  variant of: http://identifiers.org/hgnc/4212
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10822
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1758
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1109
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 801
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7179
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9644
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2617
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4892
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15993
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2821
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4237
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5275
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16181
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Phe114Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: Other
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: QD

9-74817623-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74817623
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 74817623
    reference: chr 9
allele count: 1
allele frequency: 8.246742536698004e-6
allele num: 121260
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000437972
  ensembl transcript: ENST00000545168
  gene symbol: GDA
  hgvsc: ENST00000545168.1:c.127A>G
  hgvsp: ENSP00000437972.1:p.Ile43Val
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000436619
  ensembl transcript: ENST00000475764
  gene symbol: GDA
  hgvsc: ENST00000475764.1:c.349A>G
  hgvsp: ENSP00000436619.1:p.Ile117Val
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119125
  ensembl transcript: ENST00000477618
  gene symbol: GDA
  hgvsc: ENST00000477618.1:n.657A>G
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366185
  ensembl transcript: ENST00000376986
  gene symbol: GDA
  hgvsc: ENST00000376986.1:c.223A>G
  hgvsp: ENSP00000366185.1:p.Ile75Val
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000238018
  ensembl transcript: ENST00000238018
  gene symbol: GDA
  hgvsc: ENST00000238018.4:c.349A>G
  hgvsp: ENSP00000238018.4:p.Ile117Val
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000351170
  ensembl transcript: ENST00000358399
  gene symbol: GDA
  hgvsc: ENST00000358399.3:c.349A>G
  hgvsp: ENSP00000351170.3:p.Ile117Val
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366188
  ensembl transcript: ENST00000376989
  gene symbol: GDA
  hgvsc: ENST00000376989.3:c.274A>G
  hgvsp: ENSP00000366188.3:p.Ile92Val
  variant of: http://identifiers.org/hgnc/4212
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9630
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7179
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2821
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4892
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15936
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10798
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1109
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2617
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1757
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16094
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5269
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2638
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ile117Val
num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
reference allele: A
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum

9-74817625-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74817625
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 74817625
    reference: chr 9
allele count: 1
allele frequency: 8.249599894405122e-6
allele num: 121218
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366188
  ensembl transcript: ENST00000376989
  gene symbol: GDA
  hgvsc: ENST00000376989.3:c.276C>T
  hgvsp: ENST00000376989.3:c.276C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119125
  ensembl transcript: ENST00000477618
  gene symbol: GDA
  hgvsc: ENST00000477618.1:n.659C>T
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000351170
  ensembl transcript: ENST00000358399
  gene symbol: GDA
  hgvsc: ENST00000358399.3:c.351C>T
  hgvsp: ENST00000358399.3:c.351C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366185
  ensembl transcript: ENST00000376986
  gene symbol: GDA
  hgvsc: ENST00000376986.1:c.225C>T
  hgvsp: ENST00000376986.1:c.225C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000436619
  ensembl transcript: ENST00000475764
  gene symbol: GDA
  hgvsc: ENST00000475764.1:c.351C>T
  hgvsp: ENST00000475764.1:c.351C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000238018
  ensembl transcript: ENST00000238018
  gene symbol: GDA
  hgvsc: ENST00000238018.4:c.351C>T
  hgvsp: ENST00000238018.4:c.351C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000437972
  ensembl transcript: ENST00000545168
  gene symbol: GDA
  hgvsc: ENST00000545168.1:c.129C>T
  hgvsp: ENST00000545168.1:c.129C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/4212
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15910
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1109
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10780
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7182
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9629
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2822
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4894
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2618
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1757
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 154
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2286
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4117
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16042
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ile117Ile
num of homozygotes: 0
population: Other
population: East Asian
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

9-74817631-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74817631
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 74817631
    reference: chr 9
allele count: 1
allele frequency: 8.25695648583932e-6
allele num: 121110
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366188
  ensembl transcript: ENST00000376989
  gene symbol: GDA
  hgvsc: ENST00000376989.3:c.282T>G
  hgvsp: ENSP00000366188.3:p.Phe94Leu
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119125
  ensembl transcript: ENST00000477618
  gene symbol: GDA
  hgvsc: ENST00000477618.1:n.665T>G
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000437972
  ensembl transcript: ENST00000545168
  gene symbol: GDA
  hgvsc: ENST00000545168.1:c.135T>G
  hgvsp: ENSP00000437972.1:p.Phe45Leu
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000436619
  ensembl transcript: ENST00000475764
  gene symbol: GDA
  hgvsc: ENST00000475764.1:c.357T>G
  hgvsp: ENSP00000436619.1:p.Phe119Leu
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366185
  ensembl transcript: ENST00000376986
  gene symbol: GDA
  hgvsc: ENST00000376986.1:c.231T>G
  hgvsp: ENSP00000366185.1:p.Phe77Leu
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000238018
  ensembl transcript: ENST00000238018
  gene symbol: GDA
  hgvsc: ENST00000238018.4:c.357T>G
  hgvsp: ENSP00000238018.4:p.Phe119Leu
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000351170
  ensembl transcript: ENST00000358399
  gene symbol: GDA
  hgvsc: ENST00000358399.3:c.357T>G
  hgvsp: ENSP00000351170.3:p.Phe119Leu
  variant of: http://identifiers.org/hgnc/4212
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9611
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2820
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1109
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4891
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2619
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10750
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7177
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1757
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15821
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22243
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 256
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4229
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5253
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Phe119Leu
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
population: Latino
reference allele: T
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ

9-74817633-CAGA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74817633
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 74817630
    reference: chr 9
allele count: 1
allele frequency: 8.261731658955718e-6
allele num: 121040
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000437972
  ensembl transcript: ENST00000545168
  gene symbol: GDA
  hgvsc: ENST00000545168.1:c.143_145delAAG
  hgvsp: ENSP00000437972.1:p.Glu48del
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000238018
  ensembl transcript: ENST00000238018
  gene symbol: GDA
  hgvsc: ENST00000238018.4:c.365_367delAAG
  hgvsp: ENSP00000238018.4:p.Glu122del
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366185
  ensembl transcript: ENST00000376986
  gene symbol: GDA
  hgvsc: ENST00000376986.1:c.239_241delAAG
  hgvsp: ENSP00000366185.1:p.Glu80del
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000436619
  ensembl transcript: ENST00000475764
  gene symbol: GDA
  hgvsc: ENST00000475764.1:c.365_367delAAG
  hgvsp: ENSP00000436619.1:p.Glu122del
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000351170
  ensembl transcript: ENST00000358399
  gene symbol: GDA
  hgvsc: ENST00000358399.3:c.365_367delAAG
  hgvsp: ENSP00000351170.3:p.Glu122del
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366188
  ensembl transcript: ENST00000376989
  gene symbol: GDA
  hgvsc: ENST00000376989.3:c.290_292delAAG
  hgvsp: ENSP00000366188.3:p.Glu97del
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119125
  ensembl transcript: ENST00000477618
  gene symbol: GDA
  hgvsc: ENST00000477618.1:n.673_675delAAG
  variant of: http://identifiers.org/hgnc/4212
canonical: true
consequence: inframe deletion
filter: VQSRTrancheINDEL96.00to97.00
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10729
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2618
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2820
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15752
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9612
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1109
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4893
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1757
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7180
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5246
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 302
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2286
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15795
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Glu122del
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
population: African
population: East Asian
reference allele: CAGA
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: QD

9-74817643-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74817643
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 74817643
    reference: chr 9
allele count: 1
allele frequency: 8.284043275842073e-6
allele num: 120714
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366185
  ensembl transcript: ENST00000376986
  gene symbol: GDA
  hgvsc: ENST00000376986.1:c.243A>G
  hgvsp: ENST00000376986.1:c.243A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000437972
  ensembl transcript: ENST00000545168
  gene symbol: GDA
  hgvsc: ENST00000545168.1:c.147A>G
  hgvsp: ENST00000545168.1:c.147A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000238018
  ensembl transcript: ENST00000238018
  gene symbol: GDA
  hgvsc: ENST00000238018.4:c.369A>G
  hgvsp: ENST00000238018.4:c.369A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366188
  ensembl transcript: ENST00000376989
  gene symbol: GDA
  hgvsc: ENST00000376989.3:c.294A>G
  hgvsp: ENST00000376989.3:c.294A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000436619
  ensembl transcript: ENST00000475764
  gene symbol: GDA
  hgvsc: ENST00000475764.1:c.369A>G
  hgvsp: ENST00000475764.1:c.369A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119125
  ensembl transcript: ENST00000477618
  gene symbol: GDA
  hgvsc: ENST00000477618.1:n.677A>G
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000351170
  ensembl transcript: ENST00000358399
  gene symbol: GDA
  hgvsc: ENST00000358399.3:c.369A>G
  hgvsp: ENST00000358399.3:c.369A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4212
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9574
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10607
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2820
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15425
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2618
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4891
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7173
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1757
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1109
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4222
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 612
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22242
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2286
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Val123Val
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD

9-74817652-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74817652
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 74817652
    reference: chr 9
allele count: 4
allele frequency: 3.33072426599164e-5
allele num: 120094
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000437972
  ensembl transcript: ENST00000545168
  gene symbol: GDA
  hgvsc: ENST00000545168.1:c.156A>G
  hgvsp: ENST00000545168.1:c.156A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366185
  ensembl transcript: ENST00000376986
  gene symbol: GDA
  hgvsc: ENST00000376986.1:c.252A>G
  hgvsp: ENST00000376986.1:c.252A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000119125
  ensembl transcript: ENST00000477618
  gene symbol: GDA
  hgvsc: ENST00000477618.1:n.686A>G
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000238018
  ensembl transcript: ENST00000238018
  gene symbol: GDA
  hgvsc: ENST00000238018.4:c.378A>G
  hgvsp: ENST00000238018.4:c.378A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366188
  ensembl transcript: ENST00000376989
  gene symbol: GDA
  hgvsc: ENST00000376989.3:c.303A>G
  hgvsp: ENST00000376989.3:c.303A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000351170
  ensembl transcript: ENST00000358399
  gene symbol: GDA
  hgvsc: ENST00000358399.3:c.378A>G
  hgvsp: ENST00000358399.3:c.378A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000436619
  ensembl transcript: ENST00000475764
  gene symbol: GDA
  hgvsc: ENST00000475764.1:c.378A>G
  hgvsp: ENST00000475764.1:c.378A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/4212
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1109
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4892
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7177
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10239
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9527
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1219
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1757
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14652
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2820
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2622
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 472
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5100
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22244
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14050
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 300
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2286
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Arg126Arg
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: East Asian
population: Other
reference allele: A
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: InbreedingCoeff

9-74817657-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74817657
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 74817657
    reference: chr 9
allele count: 2
allele frequency: 1.66725020423815e-5
allele num: 119958
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366185
  ensembl transcript: ENST00000376986
  gene symbol: GDA
  hgvsc: ENST00000376986.1:c.257T>C
  hgvsp: ENSP00000366185.1:p.Val86Ala
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000437972
  ensembl transcript: ENST00000545168
  gene symbol: GDA
  hgvsc: ENST00000545168.1:c.161T>C
  hgvsp: ENSP00000437972.1:p.Val54Ala
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366188
  ensembl transcript: ENST00000376989
  gene symbol: GDA
  hgvsc: ENST00000376989.3:c.308T>C
  hgvsp: ENSP00000366188.3:p.Val103Ala
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000119125
  ensembl transcript: ENST00000477618
  gene symbol: GDA
  hgvsc: ENST00000477618.1:n.691T>C
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000238018
  ensembl transcript: ENST00000238018
  gene symbol: GDA
  hgvsc: ENST00000238018.4:c.383T>C
  hgvsp: ENSP00000238018.4:p.Val128Ala
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000351170
  ensembl transcript: ENST00000358399
  gene symbol: GDA
  hgvsc: ENST00000358399.3:c.383T>C
  hgvsp: ENSP00000351170.3:p.Val128Ala
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000436619
  ensembl transcript: ENST00000475764
  gene symbol: GDA
  hgvsc: ENST00000475764.1:c.383T>C
  hgvsp: ENSP00000436619.1:p.Val128Ala
  variant of: http://identifiers.org/hgnc/4212
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1377
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9480
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14553
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4891
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1757
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2820
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10133
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7171
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 474
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1109
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2621
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5080
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3588
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Val128Ala
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
population: South Asian
reference allele: T
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum

9-74817668-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74817668
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 74817668
    reference: chr 9
allele count: 1
allele frequency: 8.375630266177531e-6
allele num: 119394
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl transcript: ENST00000477618
  gene symbol: GDA
  hgvsc: ENST00000477618.1:n.692+10T>C
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366188
  ensembl transcript: ENST00000376989
  gene symbol: GDA
  hgvsc: ENST00000376989.3:c.309+10T>C
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366185
  ensembl transcript: ENST00000376986
  gene symbol: GDA
  hgvsc: ENST00000376986.1:c.258+10T>C
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000437972
  ensembl transcript: ENST00000545168
  gene symbol: GDA
  hgvsc: ENST00000545168.1:c.162+10T>C
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000238018
  ensembl transcript: ENST00000238018
  gene symbol: GDA
  hgvsc: ENST00000238018.4:c.384+10T>C
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000351170
  ensembl transcript: ENST00000358399
  gene symbol: GDA
  hgvsc: ENST00000358399.3:c.384+10T>C
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000436619
  ensembl transcript: ENST00000475764
  gene symbol: GDA
  hgvsc: ENST00000475764.1:c.384+10T>C
  variant of: http://identifiers.org/hgnc/4212
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7166
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13758
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9841
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 943
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2070
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9437
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1757
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4890
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2621
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1109
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2820
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4113
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2076
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4193
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 546
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22245
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3588
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: Other
reference allele: T
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD

9-74817670-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74817670
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 74817670
    reference: chr 9
allele count: 13
allele frequency: 1.09076874024601e-4
allele num: 119182
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366188
  ensembl transcript: ENST00000376989
  gene symbol: GDA
  hgvsc: ENST00000376989.3:c.309+12G>A
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000238018
  ensembl transcript: ENST00000238018
  gene symbol: GDA
  hgvsc: ENST00000238018.4:c.384+12G>A
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366185
  ensembl transcript: ENST00000376986
  gene symbol: GDA
  hgvsc: ENST00000376986.1:c.258+12G>A
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000437972
  ensembl transcript: ENST00000545168
  gene symbol: GDA
  hgvsc: ENST00000545168.1:c.162+12G>A
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl transcript: ENST00000477618
  gene symbol: GDA
  hgvsc: ENST00000477618.1:n.692+12G>A
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000436619
  ensembl transcript: ENST00000475764
  gene symbol: GDA
  hgvsc: ENST00000475764.1:c.384+12G>A
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000351170
  ensembl transcript: ENST00000358399
  gene symbol: GDA
  hgvsc: ENST00000358399.3:c.384+12G>A
  variant of: http://identifiers.org/hgnc/4212
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9729
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9416
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1009
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7166
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1757
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2370
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1109
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2628
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 4888
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13391
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2819
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2284
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2259
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 607
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 642
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 154
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: South Asian
reference allele: G
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ

9-74817672-G-GAACAC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74817672
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 74817677
    reference: chr 9
allele count: 1
allele frequency: 8.390106386548982e-6
allele num: 119188
alternate allele: GAACAC
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366185
  ensembl transcript: ENST00000376986
  gene symbol: GDA
  hgvsc: ENST00000376986.1:c.258+14_258+15insAACAC
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000238018
  ensembl transcript: ENST00000238018
  gene symbol: GDA
  hgvsc: ENST00000238018.4:c.384+14_384+15insAACAC
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000437972
  ensembl transcript: ENST00000545168
  gene symbol: GDA
  hgvsc: ENST00000545168.1:c.162+14_162+15insAACAC
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366188
  ensembl transcript: ENST00000376989
  gene symbol: GDA
  hgvsc: ENST00000376989.3:c.309+14_309+15insAACAC
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000351170
  ensembl transcript: ENST00000358399
  gene symbol: GDA
  hgvsc: ENST00000358399.3:c.384+14_384+15insAACAC
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl transcript: ENST00000477618
  gene symbol: GDA
  hgvsc: ENST00000477618.1:n.692+14_692+15insAACAC
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000436619
  ensembl transcript: ENST00000475764
  gene symbol: GDA
  hgvsc: ENST00000475764.1:c.384+14_384+15insAACAC
  variant of: http://identifiers.org/hgnc/4212
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1025
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2369
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9719
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4888
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13407
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7166
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2819
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1757
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2624
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9407
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1110
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 641
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2288
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 298
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4111
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2582
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12456
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
population: Latino
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: DP

9-74817674-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74817674
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 74817674
    reference: chr 9
allele count: 1
allele frequency: 8.397997917296517e-6
allele num: 119076
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000436619
  ensembl transcript: ENST00000475764
  gene symbol: GDA
  hgvsc: ENST00000475764.1:c.384+16G>T
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000437972
  ensembl transcript: ENST00000545168
  gene symbol: GDA
  hgvsc: ENST00000545168.1:c.162+16G>T
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366185
  ensembl transcript: ENST00000376986
  gene symbol: GDA
  hgvsc: ENST00000376986.1:c.258+16G>T
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl transcript: ENST00000477618
  gene symbol: GDA
  hgvsc: ENST00000477618.1:n.692+16G>T
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000351170
  ensembl transcript: ENST00000358399
  gene symbol: GDA
  hgvsc: ENST00000358399.3:c.384+16G>T
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000238018
  ensembl transcript: ENST00000238018
  gene symbol: GDA
  hgvsc: ENST00000238018.4:c.384+16G>T
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366188
  ensembl transcript: ENST00000376989
  gene symbol: GDA
  hgvsc: ENST00000376989.3:c.309+16G>T
  variant of: http://identifiers.org/hgnc/4212
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 1110
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13303
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4888
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2453
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1053
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9662
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7165
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2819
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9405
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2624
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1757
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2284
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2582
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 638
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 305
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 677
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: DP

9-74817675-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74817675
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 74817675
    reference: chr 9
allele count: 1
allele frequency: 8.397433744247758e-6
allele num: 119084
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000238018
  ensembl transcript: ENST00000238018
  gene symbol: GDA
  hgvsc: ENST00000238018.4:c.384+17T>C
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366185
  ensembl transcript: ENST00000376986
  gene symbol: GDA
  hgvsc: ENST00000376986.1:c.258+17T>C
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366188
  ensembl transcript: ENST00000376989
  gene symbol: GDA
  hgvsc: ENST00000376989.3:c.309+17T>C
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000351170
  ensembl transcript: ENST00000358399
  gene symbol: GDA
  hgvsc: ENST00000358399.3:c.384+17T>C
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl transcript: ENST00000477618
  gene symbol: GDA
  hgvsc: ENST00000477618.1:n.692+17T>C
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000436619
  ensembl transcript: ENST00000475764
  gene symbol: GDA
  hgvsc: ENST00000475764.1:c.384+17T>C
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000437972
  ensembl transcript: ENST00000545168
  gene symbol: GDA
  hgvsc: ENST00000545168.1:c.162+17T>C
  variant of: http://identifiers.org/hgnc/4212
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4888
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7164
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1757
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2461
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2819
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9652
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2625
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1110
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13312
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9404
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2284
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3588
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 641
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 675
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22249
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum

9-74817675-T-TCCAG
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74817675
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 74817679
    reference: chr 9
allele count: 1
allele frequency: 8.397433744247758e-6
allele num: 119084
alternate allele: TCCAG
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366188
  ensembl transcript: ENST00000376989
  gene symbol: GDA
  hgvsc: ENST00000376989.3:c.309+17_309+18insCCAG
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366185
  ensembl transcript: ENST00000376986
  gene symbol: GDA
  hgvsc: ENST00000376986.1:c.258+17_258+18insCCAG
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000436619
  ensembl transcript: ENST00000475764
  gene symbol: GDA
  hgvsc: ENST00000475764.1:c.384+17_384+18insCCAG
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000238018
  ensembl transcript: ENST00000238018
  gene symbol: GDA
  hgvsc: ENST00000238018.4:c.384+17_384+18insCCAG
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000437972
  ensembl transcript: ENST00000545168
  gene symbol: GDA
  hgvsc: ENST00000545168.1:c.162+17_162+18insCCAG
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl transcript: ENST00000477618
  gene symbol: GDA
  hgvsc: ENST00000477618.1:n.692+17_692+18insCCAG
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000351170
  ensembl transcript: ENST00000358399
  gene symbol: GDA
  hgvsc: ENST00000358399.3:c.384+17_384+18insCCAG
  variant of: http://identifiers.org/hgnc/4212
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 475
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 615
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9652
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1110
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2625
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13312
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9404
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2461
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1757
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2819
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4888
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7164
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4946
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 675
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 302
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2361
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12390
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2284
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: South Asian
reference allele: T
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD

9-74817677-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74817677
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 74817677
    reference: chr 9
allele count: 4
allele frequency: 3.362248671911775e-5
allele num: 118968
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366188
  ensembl transcript: ENST00000376989
  gene symbol: GDA
  hgvsc: ENST00000376989.3:c.309+19A>G
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000351170
  ensembl transcript: ENST00000358399
  gene symbol: GDA
  hgvsc: ENST00000358399.3:c.384+19A>G
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366185
  ensembl transcript: ENST00000376986
  gene symbol: GDA
  hgvsc: ENST00000376986.1:c.258+19A>G
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000238018
  ensembl transcript: ENST00000238018
  gene symbol: GDA
  hgvsc: ENST00000238018.4:c.384+19A>G
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000437972
  ensembl transcript: ENST00000545168
  gene symbol: GDA
  hgvsc: ENST00000545168.1:c.162+19A>G
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000436619
  ensembl transcript: ENST00000475764
  gene symbol: GDA
  hgvsc: ENST00000475764.1:c.384+19A>G
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl transcript: ENST00000477618
  gene symbol: GDA
  hgvsc: ENST00000477618.1:n.692+19A>G
  variant of: http://identifiers.org/hgnc/4212
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 13188
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9608
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2818
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1105
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1110
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4888
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9395
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7164
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2560
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2626
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1757
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 721
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4111
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12234
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 663
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 309
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum

9-74817678-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74817678
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 74817678
    reference: chr 9
allele count: 1
allele frequency: 8.406610958858046e-6
allele num: 118954
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000351170
  ensembl transcript: ENST00000358399
  gene symbol: GDA
  hgvsc: ENST00000358399.3:c.384+20G>C
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366188
  ensembl transcript: ENST00000376989
  gene symbol: GDA
  hgvsc: ENST00000376989.3:c.309+20G>C
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000238018
  ensembl transcript: ENST00000238018
  gene symbol: GDA
  hgvsc: ENST00000238018.4:c.384+20G>C
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366185
  ensembl transcript: ENST00000376986
  gene symbol: GDA
  hgvsc: ENST00000376986.1:c.258+20G>C
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000437972
  ensembl transcript: ENST00000545168
  gene symbol: GDA
  hgvsc: ENST00000545168.1:c.162+20G>C
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl transcript: ENST00000477618
  gene symbol: GDA
  hgvsc: ENST00000477618.1:n.692+20G>C
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000436619
  ensembl transcript: ENST00000475764
  gene symbol: GDA
  hgvsc: ENST00000475764.1:c.384+20G>C
  variant of: http://identifiers.org/hgnc/4212
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2613
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1114
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9392
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1757
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4889
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2818
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 671
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9582
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2625
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7164
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1110
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 556
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13123
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 682
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 326
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12177
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4188
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4110
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: FS

9-74817678-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74817678
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 74817678
    reference: chr 9
allele count: 1
allele frequency: 8.406610958858046e-6
allele num: 118954
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000436619
  ensembl transcript: ENST00000475764
  gene symbol: GDA
  hgvsc: ENST00000475764.1:c.384+20G>T
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl transcript: ENST00000477618
  gene symbol: GDA
  hgvsc: ENST00000477618.1:n.692+20G>T
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000437972
  ensembl transcript: ENST00000545168
  gene symbol: GDA
  hgvsc: ENST00000545168.1:c.162+20G>T
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366185
  ensembl transcript: ENST00000376986
  gene symbol: GDA
  hgvsc: ENST00000376986.1:c.258+20G>T
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000351170
  ensembl transcript: ENST00000358399
  gene symbol: GDA
  hgvsc: ENST00000358399.3:c.384+20G>T
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000238018
  ensembl transcript: ENST00000238018
  gene symbol: GDA
  hgvsc: ENST00000238018.4:c.384+20G>T
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366188
  ensembl transcript: ENST00000376989
  gene symbol: GDA
  hgvsc: ENST00000376989.3:c.309+20G>T
  variant of: http://identifiers.org/hgnc/4212
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1114
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2625
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9392
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7164
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4889
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13123
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2818
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2613
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9582
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 556
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 671
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1757
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1110
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4944
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3588
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4110
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2454
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
population: Latino
reference allele: G
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: BaseQRankSum

9-74817679-TGTGGTA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74817679
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 74817673
    reference: chr 9
allele count: 1
allele frequency: 8.418358756776778e-6
allele num: 118788
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366185
  ensembl transcript: ENST00000376986
  gene symbol: GDA
  hgvsc: ENST00000376986.1:c.258+22_258+27delGTGGTA
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000436619
  ensembl transcript: ENST00000475764
  gene symbol: GDA
  hgvsc: ENST00000475764.1:c.384+22_384+27delGTGGTA
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000351170
  ensembl transcript: ENST00000358399
  gene symbol: GDA
  hgvsc: ENST00000358399.3:c.384+22_384+27delGTGGTA
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000437972
  ensembl transcript: ENST00000545168
  gene symbol: GDA
  hgvsc: ENST00000545168.1:c.162+22_162+27delGTGGTA
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366188
  ensembl transcript: ENST00000376989
  gene symbol: GDA
  hgvsc: ENST00000376989.3:c.309+22_309+27delGTGGTA
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000238018
  ensembl transcript: ENST00000238018
  gene symbol: GDA
  hgvsc: ENST00000238018.4:c.384+22_384+27delGTGGTA
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl transcript: ENST00000477618
  gene symbol: GDA
  hgvsc: ENST00000477618.1:n.692+22_692+27delGTGGTA
  variant of: http://identifiers.org/hgnc/4212
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 12835
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2759
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1160
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1756
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9490
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1109
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9390
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2818
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 836
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7165
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 556
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4889
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2625
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2493
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4110
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11708
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3589
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2574
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
reference allele: TGTGGTA
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum

9-74817683-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74817683
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 74817683
    reference: chr 9
allele count: 2
allele frequency: 1.686795762769044e-5
allele num: 118568
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000437972
  ensembl transcript: ENST00000545168
  gene symbol: GDA
  hgvsc: ENST00000545168.1:c.162+25G>C
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000351170
  ensembl transcript: ENST00000358399
  gene symbol: GDA
  hgvsc: ENST00000358399.3:c.384+25G>C
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366188
  ensembl transcript: ENST00000376989
  gene symbol: GDA
  hgvsc: ENST00000376989.3:c.309+25G>C
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366185
  ensembl transcript: ENST00000376986
  gene symbol: GDA
  hgvsc: ENST00000376986.1:c.258+25G>C
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000238018
  ensembl transcript: ENST00000238018
  gene symbol: GDA
  hgvsc: ENST00000238018.4:c.384+25G>C
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000436619
  ensembl transcript: ENST00000475764
  gene symbol: GDA
  hgvsc: ENST00000475764.1:c.384+25G>C
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl transcript: ENST00000477618
  gene symbol: GDA
  hgvsc: ENST00000477618.1:n.692+25G>C
  variant of: http://identifiers.org/hgnc/4212
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 556
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9446
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1756
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4889
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7163
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1208
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1109
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2818
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12773
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2626
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9384
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2796
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4109
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2569
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 142
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4889
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2541
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 410
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2285
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum

9-74817684-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74817684
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 74817684
    reference: chr 9
allele count: 1
allele frequency: 8.434547908232118e-6
allele num: 118560
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366188
  ensembl transcript: ENST00000376989
  gene symbol: GDA
  hgvsc: ENST00000376989.3:c.309+26T>C
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl transcript: ENST00000477618
  gene symbol: GDA
  hgvsc: ENST00000477618.1:n.692+26T>C
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000238018
  ensembl transcript: ENST00000238018
  gene symbol: GDA
  hgvsc: ENST00000238018.4:c.384+26T>C
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366185
  ensembl transcript: ENST00000376986
  gene symbol: GDA
  hgvsc: ENST00000376986.1:c.258+26T>C
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000436619
  ensembl transcript: ENST00000475764
  gene symbol: GDA
  hgvsc: ENST00000475764.1:c.384+26T>C
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000437972
  ensembl transcript: ENST00000545168
  gene symbol: GDA
  hgvsc: ENST00000545168.1:c.162+26T>C
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000351170
  ensembl transcript: ENST00000358399
  gene symbol: GDA
  hgvsc: ENST00000358399.3:c.384+26T>C
  variant of: http://identifiers.org/hgnc/4212
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2851
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1110
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1756
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4889
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1224
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 901
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9380
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9433
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2818
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2625
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7161
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 556
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12664
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2543
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2285
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4109
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4183
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3589
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 440
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 895
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ

9-74817690-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74817690
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 74817690
    reference: chr 9
allele count: 1
allele frequency: 8.460380040271409e-6
allele num: 118198
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000437972
  ensembl transcript: ENST00000545168
  gene symbol: GDA
  hgvsc: ENST00000545168.1:c.162+32G>A
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366188
  ensembl transcript: ENST00000376989
  gene symbol: GDA
  hgvsc: ENST00000376989.3:c.309+32G>A
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366185
  ensembl transcript: ENST00000376986
  gene symbol: GDA
  hgvsc: ENST00000376986.1:c.258+32G>A
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000238018
  ensembl transcript: ENST00000238018
  gene symbol: GDA
  hgvsc: ENST00000238018.4:c.384+32G>A
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl transcript: ENST00000477618
  gene symbol: GDA
  hgvsc: ENST00000477618.1:n.692+32G>A
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000351170
  ensembl transcript: ENST00000358399
  gene symbol: GDA
  hgvsc: ENST00000358399.3:c.384+32G>A
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000436619
  ensembl transcript: ENST00000475764
  gene symbol: GDA
  hgvsc: ENST00000475764.1:c.384+32G>A
  variant of: http://identifiers.org/hgnc/4212
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12312
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9316
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1110
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4888
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2819
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7162
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1345
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 556
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2897
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1757
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1152
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2626
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 476
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9370
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4861
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 990
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2563
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 552
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 216
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: African
population: South Asian
population: East Asian
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: VQSLOD

9-74817691-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 74817691
    reference: chr 9
  end: Position
    type: ExactPosition
    position: 74817691
    reference: chr 9
allele count: 1
allele frequency: 8.467257116729607e-6
allele num: 118102
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000351170
  ensembl transcript: ENST00000358399
  gene symbol: GDA
  hgvsc: ENST00000358399.3:c.384+33T>A
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366185
  ensembl transcript: ENST00000376986
  gene symbol: GDA
  hgvsc: ENST00000376986.1:c.258+33T>A
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000366188
  ensembl transcript: ENST00000376989
  gene symbol: GDA
  hgvsc: ENST00000376989.3:c.309+33T>A
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl transcript: ENST00000477618
  gene symbol: GDA
  hgvsc: ENST00000477618.1:n.692+33T>A
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000437972
  ensembl transcript: ENST00000545168
  gene symbol: GDA
  hgvsc: ENST00000545168.1:c.162+33T>A
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000436619
  ensembl transcript: ENST00000475764
  gene symbol: GDA
  hgvsc: ENST00000475764.1:c.384+33T>A
  variant of: http://identifiers.org/hgnc/4212
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000119125
  ensembl protein: ENSP00000238018
  ensembl transcript: ENST00000238018
  gene symbol: GDA
  hgvsc: ENST00000238018.4:c.384+33T>A
  variant of: http://identifiers.org/hgnc/4212
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 4890
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 601
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2871
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12260
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1380
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1757
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9365
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9285
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1212
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2818
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1110
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 556
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 557
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
reference allele: T

GenotypeQuality
all individuals: 22282
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 228
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3666
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 465
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 677
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 308
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1640
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1453
bin: 9.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5222
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 5.161823155938678e-5
allele num: 38746
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4736
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 622
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11376
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6440
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7822
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.5e-3

VQSLOD
type: SiteQuality
SIO_000300: -3.607e0

DP
type: SiteQuality
SIO_000300: 9.80105e5

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.284e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.37e0

QD
type: SiteQuality
SIO_000300: 1.36e0

MQ
type: SiteQuality
SIO_000300: 5.058e1

MQRankSum
type: SiteQuality
SIO_000300: -2.729e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.302e0

GenotypeQuality
all individuals: 190
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27572
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 215
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 656
bin: 7.25e1
variant carriers: 1

GenotypeQuality
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bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2554
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2628
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 461
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 225
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6986
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5064
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 666
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5840
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12022
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.68099049758929e-5
allele num: 42726
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8546
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.29e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.275e0

DP
type: SiteQuality
SIO_000300: 1.052357e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.064e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.5e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.62e0

MQRankSum
type: SiteQuality
SIO_000300: -2.854e0

MQ
type: SiteQuality
SIO_000300: 5.023e1

VQSLOD
type: SiteQuality
SIO_000300: -4.699e0

GenotypeQuality
all individuals: 16294
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 81
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 930
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 339
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 295
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31308
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9054
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6244
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12484
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5316
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.348799568384138e-4
allele num: 7414
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 45910
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 694
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.77e0

QD
type: SiteQuality
SIO_000300: 1.462e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.76e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.59e-1

MQ
type: SiteQuality
SIO_000300: 5.851e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.1e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 3.18e0

VQSLOD
type: SiteQuality
SIO_000300: -1.448e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.05e0

DP
type: SiteQuality
SIO_000300: 1.098633e6

GenotypeQuality
all individuals: 461
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 906
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 85
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 670
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 32104
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 472
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 308
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 227
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1459
bin: 9.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5386
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12622
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9172
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.13711745597538e-5
allele num: 46792
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7496
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 702
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6356
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.06e0

MQRankSum
type: SiteQuality
SIO_000300: -2.602e0

MQ
type: SiteQuality
SIO_000300: 5.179e1

QD
type: SiteQuality
SIO_000300: 3.21e0

DP
type: SiteQuality
SIO_000300: 1.117008e6

VQSLOD
type: SiteQuality
SIO_000300: -4.045e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.871e0

FS
type: SiteQuality
SIO_000300: 2.565e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.23e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.7e-3

GenotypeQuality
all individuals: 338
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 268
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 770
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 387
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 229
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 697
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 820
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 242
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1460
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6504
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7638
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.074806534823732e-4
allele num: 9304
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5468
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47888
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12816
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 708
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.221e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.9e-3

MQRankSum
type: SiteQuality
SIO_000300: 2.83e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.34e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.83e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.97e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 4.69e0

DP
type: SiteQuality
SIO_000300: 1.130777e6

GenotypeQuality
all individuals: 41
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 796
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 432
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 403
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2834
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 823
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 234
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 259
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 271
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 188
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42123
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 9
allele frequency: 8.690614136732329e-4
allele num: 10356
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8840
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14266
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6024
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 56532
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 804
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7662
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.57e0

FS
type: SiteQuality
SIO_000300: 1.249e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.3e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.6e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.02e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.09e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.308e0

QD
type: SiteQuality
SIO_000300: 1.185e1

DP
type: SiteQuality
SIO_000300: 1.260133e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 4270
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 207
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 305
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 47123
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 824
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 415
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 521
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9608
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10944
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8232
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61792
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15290
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.578282828282828e-4
allele num: 6336
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.1e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.29e0

VQSLOD
type: SiteQuality
SIO_000300: 3.97e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.0e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 3.61e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.6e-3

DP
type: SiteQuality
SIO_000300: 1.339075e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.603e1

GenotypeQuality
all individuals: 240
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 246
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 910
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3185
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1469
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 108
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 531
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11094
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9796
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6440
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15538
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8370
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.168367023636018e-5
allele num: 63124
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.92e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.15e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

MQ
type: SiteQuality
SIO_000300: 5.966e1

DP
type: SiteQuality
SIO_000300: 1.360862e6

FS
type: SiteQuality
SIO_000300: 6.155e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.94e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.837e0

VQSLOD
type: SiteQuality
SIO_000300: 1.43e0

QD
type: SiteQuality
SIO_000300: 1.136e1

GenotypeQuality
all individuals: 890
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 18
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 183
bin: 3.25e1
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GenotypeQuality
all individuals: 1469
bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11266
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.551445947623185e-5
allele num: 64456
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8490
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9986
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15800
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.382244e6

MQ
type: SiteQuality
SIO_000300: 5.902e1

VQSLOD
type: SiteQuality
SIO_000300: -1.341e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.57e-1

QD
type: SiteQuality
SIO_000300: 9.56e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -9.97e-1

FS
type: SiteQuality
SIO_000300: 6.84e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.846e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.05e-1

GenotypeQuality
all individuals: 292
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 411
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 410
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 895
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variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 48891
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 277
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GenotypeQuality
all individuals: 1469
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variant carriers: 3

GenotypeQuality
all individuals: 3233
bin: 6.75e1
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GenotypeQuality
all individuals: 241
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 8.855827134254339e-5
allele num: 11292
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.548706829797119e-5
allele num: 64570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10008
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.304375236414071e-5
allele num: 15862
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8524
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6516
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 8.9e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.273e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -1.7e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.96e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.57e-1

DP
type: SiteQuality
SIO_000300: 1.383185e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.51e0

MQRankSum
type: SiteQuality
SIO_000300: 1.72e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8522
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.099717925668764e-5
allele num: 64522
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.121076233183856e-3
allele num: 892
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.863676653075696e-5
allele num: 11282
num of homozygotes: 0

African
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allele count: 15
allele frequency: 1.500300060012002e-3
allele num: 9998
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15846
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6516
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.1e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.83e-1

MQ
type: SiteQuality
SIO_000300: 5.978e1

MQRankSum
type: SiteQuality
SIO_000300: 5.570000000000001e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
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SIO_000300: -5.0e-4

QD
type: SiteQuality
SIO_000300: 1.024e1

VQSLOD
type: SiteQuality
SIO_000300: 4.16e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.14e-1

DP
type: SiteQuality
SIO_000300: 1.38375e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele frequency: 0.0e0
allele num: 884
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11258
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8508
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.555693839452396e-5
allele num: 64280
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6506
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9948
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.504e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.26e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.74e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 8.59e-1

DP
type: SiteQuality
SIO_000300: 1.373368e6

VQSLOD
type: SiteQuality
SIO_000300: -4.575e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.891e0

QD
type: SiteQuality
SIO_000300: 7.52e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15816
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8504
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African
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allele count: 1
allele frequency: 1.004823151125402e-4
allele num: 9952
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11258
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6502
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64258
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.113e0

MQ
type: SiteQuality
SIO_000300: 5.81e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

QD
type: SiteQuality
SIO_000300: 1.071e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.46e0

VQSLOD
type: SiteQuality
SIO_000300: -2.737e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.406e0

DP
type: SiteQuality
SIO_000300: 1.370947e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.77e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6472
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8472
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15730
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11194
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 4.056795131845842e-4
allele num: 9860
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63680
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.83e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.98e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.5e-3

QD
type: SiteQuality
SIO_000300: 1.199e1

MQ
type: SiteQuality
SIO_000300: 5.867e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.46e-1

DP
type: SiteQuality
SIO_000300: 1.351227e6

VQSLOD
type: SiteQuality
SIO_000300: 6.5e-1

FS
type: SiteQuality
SIO_000300: 2.431e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.66e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9830
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.579030475288173e-5
allele num: 63330
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11146
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8430
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6446
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15664
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.33819e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.9e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 5.24e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.43e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.54e-1

FS
type: SiteQuality
SIO_000300: 2.859e0

MQRankSum
type: SiteQuality
SIO_000300: -3.26e-1

ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9818
num of homozygotes: 0

South Asian
type: Population
allele count: 11
allele frequency: 7.032348804500703e-4
allele num: 15642
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6440
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11148
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8420
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European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63244
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 1.918e0

MQRankSum
type: SiteQuality
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QD
type: SiteQuality
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VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.33532e6

ClippingRankSum
type: SiteQuality
SIO_000300: 2.29e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.767e0

ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 61216
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 842
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
allele num: 15334
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African
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allele count: 1
allele frequency: 1.043405676126878e-4
allele num: 9584
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6330
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
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InbreedingCoeff
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QD
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ClippingRankSum
type: SiteQuality
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FS
type: SiteQuality
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BaseQRankSum
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DP
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ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 9500
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.228497600590623e-5
allele num: 10836
num of homozygotes: 0

Other
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South Asian
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allele frequency: 0.0e0
allele num: 15262
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European (Finnish)
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
allele num: 8038
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
type: SiteQuality
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BaseQRankSum
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DP
type: SiteQuality
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VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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QD
type: SiteQuality
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FS
type: SiteQuality
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MQ
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 9500
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 846
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 10836
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.651909607506277e-5
allele num: 60536
num of homozygotes: 0

East Asian
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num of homozygotes: 0

South Asian
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ReadPosRankSum
type: SiteQuality
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BaseQRankSum
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DP
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VQSLOD
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ClippingRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
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MQRankSum
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MQ
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15244
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10828
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9470
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6288
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8014
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.657275439177991e-5
allele num: 60340
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.18e0

InbreedingCoeff
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 7.74e0

FS
type: SiteQuality
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ClippingRankSum
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SIO_000300: 1.51e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.654e0

MQRankSum
type: SiteQuality
SIO_000300: 2.92e-1

VQSLOD
type: SiteQuality
SIO_000300: -8.999999999999999e-3

DP
type: SiteQuality
SIO_000300: 1.219286e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9072
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6100
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 10330
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 56812
num of homozygotes: 0

East Asian
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allele count: 7
allele frequency: 9.416195856873823e-4
allele num: 7434
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 14854
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.899e1

VQSLOD
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QD
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SIO_000300: 1.213e1

BaseQRankSum
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MQRankSum
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DP
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SIO_000300: 1.052373e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-3

FS
type: SiteQuality
SIO_000300: 1.2254e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.41e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.41e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 7434
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6100
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.760191508836161e-5
allele num: 56812
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 10330
num of homozygotes: 0

African
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allele count: 2
allele frequency: 2.204585537918871e-4
allele num: 9072
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 14854
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 822
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.052373e6

VQSLOD
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FS
type: SiteQuality
SIO_000300: 1.2254e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-3

MQRankSum
type: SiteQuality
SIO_000300: -5.32e-1

QD
type: SiteQuality
SIO_000300: 1.213e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.41e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.512e0

MQ
type: SiteQuality
SIO_000300: 5.899e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.41e-1

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11450
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 830
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6576
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 11032
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.56137775973519e-5
allele num: 64046
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.2e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.26e0

ClippingRankSum
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.940621e6

ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.56e1

MQ
type: SiteQuality
SIO_000300: 5.805e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.25e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -2.23e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6594
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.547221190741428e-5
allele num: 64632
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8566
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10184
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 840
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11476
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11490
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.66e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.010409e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.183e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.11e-1

QD
type: SiteQuality
SIO_000300: 1.074e1

MQRankSum
type: SiteQuality
SIO_000300: 2.97e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.79e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.0e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11550
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65360
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13032
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 860
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.682416731216112e-5
allele num: 10328
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.278e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.328e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.5e-2

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.78e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.2e-3

QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.928e1

DP
type: SiteQuality
SIO_000300: 2.042397e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65454
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African
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allele frequency: 0.0e0
allele num: 10340
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East Asian
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allele count: 1
allele frequency: 1.160900859066636e-4
allele num: 8614
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 7.528986598403855e-5
allele num: 13282
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.946e1

FS
type: SiteQuality
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MQRankSum
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VQSLOD
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ReadPosRankSum
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QD
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BaseQRankSum
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InbreedingCoeff
type: SiteQuality
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DP
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ClippingRankSum
type: SiteQuality
SIO_000300: -4.01e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
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African
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num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.516300227445034e-5
allele num: 65950
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
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VQSLOD
type: SiteQuality
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ReadPosRankSum
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DP
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FS
type: SiteQuality
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MQRankSum
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ClippingRankSum
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BaseQRankSum
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MQ
type: SiteQuality
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 6.307556452630251e-5
allele num: 15854
num of homozygotes: 0

East Asian
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
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Other
type: Population
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African
type: Population
allele count: 0
allele frequency: 0.0e0
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Latino
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European (Non-Finnish)
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allele num: 66406
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MQRankSum
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VQSLOD
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FS
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DP
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InbreedingCoeff
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ClippingRankSum
type: SiteQuality
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QD
type: SiteQuality
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MQ
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SIO_000300: 5.933e1

ReadPosRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele num: 8648
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Latino
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allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

South Asian
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Other
type: Population
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African
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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ReadPosRankSum
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QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.954e1

BaseQRankSum
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SIO_000300: -2.589e0

MQRankSum
type: SiteQuality
SIO_000300: 9.5e-2

FS
type: SiteQuality
SIO_000300: 3.939e0

DP
type: SiteQuality
SIO_000300: 2.087418e6

ClippingRankSum
type: SiteQuality
SIO_000300: 7.4e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.5e-3

VQSLOD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500600240096038e-5
allele num: 66640
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16440
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.43e0

QD
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SIO_000300: 1.486e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.97e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.47e-1

MQ
type: SiteQuality
SIO_000300: 5.947e1

DP
type: SiteQuality
SIO_000300: 2.092061e6

FS
type: SiteQuality
SIO_000300: 2.506e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -9.757e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.35e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500375093773443e-5
allele num: 66650
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.937e1

DP
type: SiteQuality
SIO_000300: 2.092648e6

BaseQRankSum
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SIO_000300: -1.716e0

InbreedingCoeff
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SIO_000300: 2.79e-2

VQSLOD
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FS
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SIO_000300: 0.0e0

ClippingRankSum
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SIO_000300: 1.63e0

MQRankSum
type: SiteQuality
SIO_000300: -1.77e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.843e0

QD
type: SiteQuality
SIO_000300: 1.185e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499565126113427e-5
allele num: 66686
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 3.836e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.221e0

MQ
type: SiteQuality
SIO_000300: 5.971e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.93e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.18e-1

QD
type: SiteQuality
SIO_000300: 1.352e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.6e-2

DP
type: SiteQuality
SIO_000300: 2.094317e6

VQSLOD
type: SiteQuality
SIO_000300: 8.38e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

South Asian
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allele count: 1
allele frequency: 6.05913717886573e-5
allele num: 16504
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66598
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10380
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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MQRankSum
type: SiteQuality
SIO_000300: 3.03e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.007e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.91e-1

FS
type: SiteQuality
SIO_000300: 2.6355e1

MQ
type: SiteQuality
SIO_000300: 5.905e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -3.329e0

QD
type: SiteQuality
SIO_000300: 4.37e0

DP
type: SiteQuality
SIO_000300: 2.110549e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.213e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6556
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.004988280545706e-5
allele num: 66556
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10374
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16504
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.47e0

DP
type: SiteQuality
SIO_000300: 2.116625e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.999e0

InbreedingCoeff
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ClippingRankSum
type: SiteQuality
SIO_000300: -9.29e-1

MQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.946e1

VQSLOD
type: SiteQuality
SIO_000300: 8.62e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

South Asian
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.650646593321752e-5
allele num: 10362
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
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allele num: 6556
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FS
type: SiteQuality
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VQSLOD
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MQRankSum
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MQ
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ClippingRankSum
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InbreedingCoeff
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ReadPosRankSum
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BaseQRankSum
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QD
type: SiteQuality
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66498
num of homozygotes: 0

South Asian
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African
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Latino
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allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

Other
type: Population
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MQ
type: SiteQuality
SIO_000300: 5.964e1

FS
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
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MQRankSum
type: SiteQuality
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ClippingRankSum
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VQSLOD
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BaseQRankSum
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InbreedingCoeff
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QD
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 8

European (Finnish)
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allele count: 7
allele frequency: 1.073290401717265e-3
allele num: 6522
num of homozygotes: 0

South Asian
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.504573904670197e-5
allele num: 66464
num of homozygotes: 0

Other
type: Population
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African
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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ClippingRankSum
type: SiteQuality
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MQ
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VQSLOD
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BaseQRankSum
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DP
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QD
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ReadPosRankSum
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MQRankSum
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FS
type: SiteQuality
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6522
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.504573904670197e-5
allele num: 66464
num of homozygotes: 0

African
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Other
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DP
type: SiteQuality
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ReadPosRankSum
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VQSLOD
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MQ
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FS
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QD
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ClippingRankSum
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BaseQRankSum
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InbreedingCoeff
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MQRankSum
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GenotypeQuality
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variant carriers: 12

GenotypeQuality
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variant carriers: 24

GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 16

GenotypeQuality
all individuals: 3521
bin: 9.25e1
variant carriers: 12

GenotypeQuality
all individuals: 2622
bin: 7.25e1
variant carriers: 10

GenotypeQuality
all individuals: 5224
bin: 6.75e1
variant carriers: 30

GenotypeQuality
all individuals: 240
bin: 7.5e0
variant carriers: 46

GenotypeQuality
all individuals: 18582
bin: 9.75e1
variant carriers: 245

GenotypeQuality
all individuals: 246
bin: 4.25e1
variant carriers: 16

GenotypeQuality
all individuals: 284
bin: 4.75e1
variant carriers: 19

East Asian
type: Population
allele count: 39
allele frequency: 4.621948328987911e-3
allele num: 8438
num of homozygotes: 0

South Asian
type: Population
allele count: 7
allele frequency: 4.261017774531288e-4
allele num: 16428
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 223
allele frequency: 3.855463347164592e-2
allele num: 5784
num of homozygotes: 0

African
type: Population
allele count: 49
allele frequency: 4.987785016286645e-3
allele num: 9824
num of homozygotes: 0

Other
type: Population
allele count: 8
allele frequency: 9.36768149882904e-3
allele num: 854
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 192
allele frequency: 2.977390441336104e-3
allele num: 64486
num of homozygotes: 0

Latino
type: Population
allele count: 24
allele frequency: 2.117896223085069e-3
allele num: 11332
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.0316e2

MQRankSum
type: SiteQuality
SIO_000300: 1.53e-1

MQ
type: SiteQuality
SIO_000300: 5.956e1

DP
type: SiteQuality
SIO_000300: 2.477583e6

VQSLOD
type: SiteQuality
SIO_000300: -8.141e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.9e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -6.353e0

QD
type: SiteQuality
SIO_000300: 7.5e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 7.4e-2

GenotypeQuality
all individuals: 5268
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3590
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4115
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16240
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22171
bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66662
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.637070305752289e-5
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16506
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.851e0

QD
type: SiteQuality
SIO_000300: 1.385e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

DP
type: SiteQuality
SIO_000300: 2.330623e6

VQSLOD
type: SiteQuality
SIO_000300: -1.819e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.214e0

FS
type: SiteQuality
SIO_000300: 6.936e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.37e0

MQ
type: SiteQuality
SIO_000300: 5.953e1

MQRankSum
type: SiteQuality
SIO_000300: 2.77e0

GenotypeQuality
all individuals: 2642
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22208
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2289
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16258
bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66714
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -3.04e-1

FS
type: SiteQuality
SIO_000300: 4.94e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.8e0

QD
type: SiteQuality
SIO_000300: 1.63e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.175e0

MQ
type: SiteQuality
SIO_000300: 5.968e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.59e0

VQSLOD
type: SiteQuality
SIO_000300: -1.398e0

DP
type: SiteQuality
SIO_000300: 2.325367e6

GenotypeQuality
all individuals: 3591
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16258
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4248
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 22208
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2642
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2289
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498935755613514e-5
allele num: 66714
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.63e1

VQSLOD
type: SiteQuality
SIO_000300: -1.398e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

FS
type: SiteQuality
SIO_000300: 4.94e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.8e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.175e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.59e0

MQ
type: SiteQuality
SIO_000300: 5.968e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.04e-1

DP
type: SiteQuality
SIO_000300: 2.325367e6

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2642
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2289
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5289
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16263
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4118
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66720
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.977e1

VQSLOD
type: SiteQuality
SIO_000300: -6.814e0

DP
type: SiteQuality
SIO_000300: 2.325358e6

QD
type: SiteQuality
SIO_000300: 1.623e1

MQRankSum
type: SiteQuality
SIO_000300: 8.61e-1

FS
type: SiteQuality
SIO_000300: 1.456e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.31e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -1.924e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.28e0

GenotypeQuality
all individuals: 2643
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22209
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5292
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3592
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16272
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4118
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498800959232614e-5
allele num: 66720
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.517e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.17e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.639e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.71e-1

MQ
type: SiteQuality
SIO_000300: 5.967e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.21e0

MQRankSum
type: SiteQuality
SIO_000300: -1.408e0

QD
type: SiteQuality
SIO_000300: 1.596e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

DP
type: SiteQuality
SIO_000300: 2.325492e6

GenotypeQuality
all individuals: 5290
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 7
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2290
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16265
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 18
bin: 4.25e1
variant carriers: 3

GenotypeQuality
all individuals: 15
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 23
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 4120
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.25e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.927525057825752e-4
allele num: 10376
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 15
allele frequency: 2.251170608716533e-4
allele num: 66632
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.515610791148833e-4
allele num: 6598
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.640055296353897e-5
allele num: 11574
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 3.9e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.249e0

MQ
type: SiteQuality
SIO_000300: 5.922e1

DP
type: SiteQuality
SIO_000300: 2.334105e6

FS
type: SiteQuality
SIO_000300: 1.48562e2

MQRankSum
type: SiteQuality
SIO_000300: 5.05e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -6.205e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.39e0

VQSLOD
type: SiteQuality
SIO_000300: -1.059e2

GenotypeQuality
all individuals: 1
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variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16266
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
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variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5286
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4243
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22241
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 2648
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 2
allele frequency: 1.727414061150458e-4
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 7.494229443328637e-5
allele num: 66718
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.9e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.25e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.251e0

QD
type: SiteQuality
SIO_000300: 1.114e1

MQ
type: SiteQuality
SIO_000300: 5.962e1

VQSLOD
type: SiteQuality
SIO_000300: 1.96e0

FS
type: SiteQuality
SIO_000300: 2.493e0

MQRankSum
type: SiteQuality
SIO_000300: 1.36e-1

DP
type: SiteQuality
SIO_000300: 2.331242e6

GenotypeQuality
all individuals: 13
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 0
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variant carriers: 0

GenotypeQuality
all individuals: 22241
bin: 9.75e1
variant carriers: 9

GenotypeQuality
all individuals: 2648
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variant carriers: 0

GenotypeQuality
all individuals: 3591
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

South Asian
type: Population
allele count: 9
allele frequency: 5.451902108068815e-4
allele num: 16508
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66718
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.25e-1

MQ
type: SiteQuality
SIO_000300: 5.962e1

MQRankSum
type: SiteQuality
SIO_000300: 1.36e-1

FS
type: SiteQuality
SIO_000300: 2.493e0

DP
type: SiteQuality
SIO_000300: 2.331242e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.9e-2

QD
type: SiteQuality
SIO_000300: 1.114e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.251e0

VQSLOD
type: SiteQuality
SIO_000300: 1.96e0

GenotypeQuality
all individuals: 4241
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 0
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variant carriers: 0

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
all individuals: 2288
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variant carriers: 0

GenotypeQuality
all individuals: 16264
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variant carriers: 0

GenotypeQuality
all individuals: 22238
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 0
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
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European (Finnish)
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African
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South Asian
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ClippingRankSum
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ReadPosRankSum
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DP
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QD
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VQSLOD
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FS
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BaseQRankSum
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MQ
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MQRankSum
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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South Asian
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European (Non-Finnish)
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Other
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East Asian
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African
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FS
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VQSLOD
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ClippingRankSum
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DP
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MQ
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MQRankSum
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InbreedingCoeff
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ReadPosRankSum
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BaseQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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Other
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Latino
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European (Non-Finnish)
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allele num: 66712
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African
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South Asian
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QD
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FS
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MQRankSum
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InbreedingCoeff
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VQSLOD
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ReadPosRankSum
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MQ
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DP
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ClippingRankSum
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Latino
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European (Finnish)
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East Asian
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African
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Other
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MQ
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BaseQRankSum
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VQSLOD
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ClippingRankSum
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InbreedingCoeff
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MQRankSum
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DP
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ReadPosRankSum
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FS
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Latino
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European (Non-Finnish)
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European (Finnish)
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African
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East Asian
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BaseQRankSum
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VQSLOD
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InbreedingCoeff
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ReadPosRankSum
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QD
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FS
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MQ
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MQRankSum
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DP
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Finnish)
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African
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Latino
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South Asian
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European (Non-Finnish)
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BaseQRankSum
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FS
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DP
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QD
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MQRankSum
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InbreedingCoeff
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MQ
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ClippingRankSum
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ReadPosRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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African
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European (Non-Finnish)
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South Asian
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Other
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Latino
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FS
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ClippingRankSum
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DP
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ReadPosRankSum
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InbreedingCoeff
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VQSLOD
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BaseQRankSum
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QD
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MQRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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Other
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South Asian
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European (Finnish)
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African
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East Asian
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ClippingRankSum
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ReadPosRankSum
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InbreedingCoeff
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VQSLOD
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BaseQRankSum
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MQRankSum
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FS
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DP
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MQ
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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South Asian
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East Asian
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European (Non-Finnish)
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Latino
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European (Finnish)
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ReadPosRankSum
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FS
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MQRankSum
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InbreedingCoeff
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DP
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MQ
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BaseQRankSum
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QD
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ClippingRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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European (Non-Finnish)
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Latino
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African
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South Asian
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East Asian
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BaseQRankSum
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ReadPosRankSum
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FS
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MQRankSum
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QD
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VQSLOD
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MQ
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DP
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InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2600
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22246
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2285
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 2
allele frequency: 1.927153594141453e-4
allele num: 10378
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66256
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15668
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 1.247e1

MQ
type: SiteQuality
SIO_000300: 5.95e1

MQRankSum
type: SiteQuality
SIO_000300: 9.8e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.85e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.9e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.04e-1

DP
type: SiteQuality
SIO_000300: 2.301229e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.46e0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2285
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5043
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10350
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.512584704743466e-5
allele num: 66112
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15308
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8584
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.116e0

VQSLOD
type: SiteQuality
SIO_000300: -5.855e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.710000000000001e0

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.287662e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.427e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.24e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.521e1

GenotypeQuality
all individuals: 4957
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 1

GenotypeQuality
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bin: 9.75e1
variant carriers: 12

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3588
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 13
allele frequency: 1.968146308968691e-4
allele num: 66052
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10340
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15178
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.237e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.77e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

FS
type: SiteQuality
SIO_000300: 6.35e-1

DP
type: SiteQuality
SIO_000300: 2.282934e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.08e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.06e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.89e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.055e0

MQ
type: SiteQuality
SIO_000300: 5.977e1

GenotypeQuality
all individuals: 3588
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 611
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2284
bin: 8.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10340
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66054
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8580
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15178
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.661008141347653e-5
allele num: 11546
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -6.649e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.09e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.6e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.44e-1

QD
type: SiteQuality
SIO_000300: 9.0e-1

MQ
type: SiteQuality
SIO_000300: 5.686e1

FS
type: SiteQuality
SIO_000300: 2.744e0

VQSLOD
type: SiteQuality
SIO_000300: -4.391e-1

DP
type: SiteQuality
SIO_000300: 2.28227e6

GenotypeQuality
all individuals: 81
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4190
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4112
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2337
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4945
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variant carriers: 0

GenotypeQuality
all individuals: 22248
bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10336
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.661008141347653e-5
allele num: 11546
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15108
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8580
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66020
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.866e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.615e0

MQ
type: SiteQuality
SIO_000300: 5.688e1

VQSLOD
type: SiteQuality
SIO_000300: -6.681e0

MQRankSum
type: SiteQuality
SIO_000300: -7.054e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.41e-1

FS
type: SiteQuality
SIO_000300: 2.751e0

QD
type: SiteQuality
SIO_000300: 1.49e0

DP
type: SiteQuality
SIO_000300: 2.2804e6

GenotypeQuality
all individuals: 23
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2361
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 77
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variant carriers: 0

GenotypeQuality
all individuals: 43
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variant carriers: 0

GenotypeQuality
all individuals: 4112
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12390
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variant carriers: 0

GenotypeQuality
all individuals: 4946
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2583
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 302
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4190
bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66016
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10336
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.612881893929374e-5
allele num: 15122
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11544
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8580
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

QD
type: SiteQuality
SIO_000300: 5.85e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.49e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.95e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.59e0

FS
type: SiteQuality
SIO_000300: 1.335e0

MQRankSum
type: SiteQuality
SIO_000300: -3.27e-1

DP
type: SiteQuality
SIO_000300: 2.280299e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.11e-1

GenotypeQuality
all individuals: 3588
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
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variant carriers: 0

GenotypeQuality
all individuals: 641
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variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22249
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 43
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variant carriers: 0

GenotypeQuality
all individuals: 2583
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 23
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variant carriers: 0

GenotypeQuality
all individuals: 4112
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4190
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66016
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8580
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10336
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.662508662508663e-5
allele num: 11544
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15122
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.280299e6

FS
type: SiteQuality
SIO_000300: 1.335e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -3.27e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.11e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.95e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.49e0

VQSLOD
type: SiteQuality
SIO_000300: 1.59e0

QD
type: SiteQuality
SIO_000300: 5.85e0

GenotypeQuality
all individuals: 4943
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2576
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 62
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variant carriers: 0

GenotypeQuality
all individuals: 50
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GenotypeQuality
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bin: 9.75e1
variant carriers: 4

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2436
bin: 2.25e1
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GenotypeQuality
all individuals: 2284
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8578
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10328
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.06134076857801e-5
allele num: 65992
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15038
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.88e0

QD
type: SiteQuality
SIO_000300: 1.398e1

MQ
type: SiteQuality
SIO_000300: 5.954e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.620000000000001e-1

FS
type: SiteQuality
SIO_000300: 5.91e-1

MQRankSum
type: SiteQuality
SIO_000300: -7.15e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.129e0

DP
type: SiteQuality
SIO_000300: 2.278329e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -4.71e-1

GenotypeQuality
all individuals: 2575
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 67
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10322
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.661008141347653e-5
allele num: 11546
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15038
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65984
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8578
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.8e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.97e0

MQ
type: SiteQuality
SIO_000300: 5.955e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.79e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.63e0

QD
type: SiteQuality
SIO_000300: 4.37e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

DP
type: SiteQuality
SIO_000300: 2.277176e6

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 4.716e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2575
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.515518913676043e-5
allele num: 65984
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10322
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15038
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.716e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.8e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.79e-1

DP
type: SiteQuality
SIO_000300: 2.277176e6

MQRankSum
type: SiteQuality
SIO_000300: -1.63e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -2.876e0

MQ
type: SiteQuality
SIO_000300: 5.955e1

QD
type: SiteQuality
SIO_000300: 4.37e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.97e0

GenotypeQuality
all individuals: 22249
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2284
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 741
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 404
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4907
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4187
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 840
bin: 3.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8568
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14934
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10322
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.661008141347653e-5
allele num: 11546
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65932
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -6.23e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.506e0

DP
type: SiteQuality
SIO_000300: 2.273281e6

MQRankSum
type: SiteQuality
SIO_000300: -6.353e0

MQ
type: SiteQuality
SIO_000300: 5.732e1

QD
type: SiteQuality
SIO_000300: 7.8e-1

FS
type: SiteQuality
SIO_000300: 8.904e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.32e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.561e0

GenotypeQuality
all individuals: 4183
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 738
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11731
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 33
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 77
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 848
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3589
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22249
bin: 9.75e1
variant carriers: 2

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.518695137138171e-5
allele num: 65846
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10318
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.664009703690868e-5
allele num: 11542
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14816
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8566
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.81e0

VQSLOD
type: SiteQuality
SIO_000300: 9.94e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.21e-1

MQ
type: SiteQuality
SIO_000300: 5.959e1

QD
type: SiteQuality
SIO_000300: 1.376e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.97e0

DP
type: SiteQuality
SIO_000300: 2.27185e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.54e0

GenotypeQuality
all individuals: 77
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2568
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 96
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4885
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 103
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 754
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22250
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 11613
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.515151515151515e-4
allele num: 6600
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10312
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14822
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65846
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8564
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.487e0

QD
type: SiteQuality
SIO_000300: 1.642e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.372e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.93e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.84e0

VQSLOD
type: SiteQuality
SIO_000300: -4.48e-2

DP
type: SiteQuality
SIO_000300: 2.270373e6

MQRankSum
type: SiteQuality
SIO_000300: -5.24e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.3e-3

MQ
type: SiteQuality
SIO_000300: 5.985e1

GenotypeQuality
all individuals: 4180
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 802
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11194
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2524
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3589
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4109
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2284
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22250
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65748
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.671522719389525e-5
allele num: 11532
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10296
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14598
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8546
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.61e-1

FS
type: SiteQuality
SIO_000300: 8.3e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.76e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.14e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

QD
type: SiteQuality
SIO_000300: 7.44e0

MQ
type: SiteQuality
SIO_000300: 5.963e1

MQRankSum
type: SiteQuality
SIO_000300: 6.03e-1

DP
type: SiteQuality
SIO_000300: 2.265193e6

VQSLOD
type: SiteQuality
SIO_000300: -6.5e-2