6-90312807-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90312807
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 90312807
    reference: chr 6
allele count: 3
allele frequency: 4.313939777400707e-5
allele num: 69542
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000396771
  ensembl transcript: ENST00000447838
  gene symbol: ANKRD6
  hgvsc: ENST00000447838.2:c.279G>A
  hgvsp: ENST00000447838.2:c.279G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430954
  ensembl transcript: ENST00000485637
  gene symbol: ANKRD6
  hgvsc: ENST00000485637.1:c.279G>A
  hgvsp: ENST00000485637.1:c.279G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000428309
  ensembl transcript: ENST00000522705
  gene symbol: ANKRD6
  hgvsc: ENST00000522705.1:c.279G>A
  hgvsp: ENST00000522705.1:c.279G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430985
  ensembl transcript: ENST00000522441
  gene symbol: ANKRD6
  hgvsc: ENST00000522441.1:c.279G>A
  hgvsp: ENST00000522441.1:c.279G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429431
  ensembl transcript: ENST00000465722
  gene symbol: ANKRD6
  hgvsc: ENST00000465722.2:c.279G>A
  hgvsp: ENST00000465722.2:c.279G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000520886
  gene symbol: ANKRD6
  hgvsc: ENST00000520886.2:n.331G>A
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000358416
  ensembl transcript: ENST00000369408
  gene symbol: ANKRD6
  hgvsc: ENST00000369408.5:c.279G>A
  hgvsp: ENST00000369408.5:c.279G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000428377
  ensembl transcript: ENST00000523798
  gene symbol: ANKRD6
  hgvsc: ENST00000523798.1:c.279G>A
  hgvsp: ENST00000523798.1:c.279G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000345767
  ensembl transcript: ENST00000339746
  gene symbol: ANKRD6
  hgvsc: ENST00000339746.4:c.279G>A
  hgvsp: ENST00000339746.4:c.279G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl transcript: ENST00000520897
  gene symbol: LYRM2
  hgvsc: ENST00000520897.1:n.562+18633C>T
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429235
  ensembl transcript: ENST00000518150
  gene symbol: ANKRD6
  hgvsc: ENST00000518150.1:c.121-20322G>A
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000518253
  gene symbol: ANKRD6
  hgvsc: ENST00000518253.1:n.96G>A
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000083099
  ensembl protein: ENSP00000430316
  ensembl transcript: ENST00000412237
  gene symbol: LYRM2
  hgvsc: ENST00000412237.2:c.*139C>T
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429782
  ensembl transcript: ENST00000520793
  gene symbol: ANKRD6
  hgvsc: ENST00000520793.1:c.279G>A
  hgvsp: ENST00000520793.1:c.279G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17280
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1730
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2203
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4729
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17520
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8292
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Ala93Ala
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: South Asian
population: African
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP

6-90312807-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90312807
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 90312807
    reference: chr 6
allele count: 3
allele frequency: 4.313939777400707e-5
allele num: 69542
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429235
  ensembl transcript: ENST00000518150
  gene symbol: ANKRD6
  hgvsc: ENST00000518150.1:c.121-20322G>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000428377
  ensembl transcript: ENST00000523798
  gene symbol: ANKRD6
  hgvsc: ENST00000523798.1:c.279G>T
  hgvsp: ENST00000523798.1:c.279G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000518253
  gene symbol: ANKRD6
  hgvsc: ENST00000518253.1:n.96G>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429431
  ensembl transcript: ENST00000465722
  gene symbol: ANKRD6
  hgvsc: ENST00000465722.2:c.279G>T
  hgvsp: ENST00000465722.2:c.279G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430985
  ensembl transcript: ENST00000522441
  gene symbol: ANKRD6
  hgvsc: ENST00000522441.1:c.279G>T
  hgvsp: ENST00000522441.1:c.279G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000083099
  ensembl protein: ENSP00000430316
  ensembl transcript: ENST00000412237
  gene symbol: LYRM2
  hgvsc: ENST00000412237.2:c.*139C>A
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl transcript: ENST00000520897
  gene symbol: LYRM2
  hgvsc: ENST00000520897.1:n.562+18633C>A
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000520886
  gene symbol: ANKRD6
  hgvsc: ENST00000520886.2:n.331G>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000396771
  ensembl transcript: ENST00000447838
  gene symbol: ANKRD6
  hgvsc: ENST00000447838.2:c.279G>T
  hgvsp: ENST00000447838.2:c.279G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000358416
  ensembl transcript: ENST00000369408
  gene symbol: ANKRD6
  hgvsc: ENST00000369408.5:c.279G>T
  hgvsp: ENST00000369408.5:c.279G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429782
  ensembl transcript: ENST00000520793
  gene symbol: ANKRD6
  hgvsc: ENST00000520793.1:c.279G>T
  hgvsp: ENST00000520793.1:c.279G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000345767
  ensembl transcript: ENST00000339746
  gene symbol: ANKRD6
  hgvsc: ENST00000339746.4:c.279G>T
  hgvsp: ENST00000339746.4:c.279G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000428309
  ensembl transcript: ENST00000522705
  gene symbol: ANKRD6
  hgvsc: ENST00000522705.1:c.279G>T
  hgvsp: ENST00000522705.1:c.279G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430954
  ensembl transcript: ENST00000485637
  gene symbol: ANKRD6
  hgvsc: ENST00000485637.1:c.279G>T
  hgvsp: ENST00000485637.1:c.279G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17280
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17520
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2203
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1730
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1168
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8292
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala93Ala
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: African
population: European (Finnish)
reference allele: G
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: DP

6-90312816-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90312816
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 90312816
    reference: chr 6
allele count: 2
allele frequency: 2.928600714578574e-5
allele num: 68292
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000428377
  ensembl transcript: ENST00000523798
  gene symbol: ANKRD6
  hgvsc: ENST00000523798.1:c.288C>T
  hgvsp: ENST00000523798.1:c.288C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl transcript: ENST00000520897
  gene symbol: LYRM2
  hgvsc: ENST00000520897.1:n.562+18624G>A
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000358416
  ensembl transcript: ENST00000369408
  gene symbol: ANKRD6
  hgvsc: ENST00000369408.5:c.288C>T
  hgvsp: ENST00000369408.5:c.288C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430954
  ensembl transcript: ENST00000485637
  gene symbol: ANKRD6
  hgvsc: ENST00000485637.1:c.288C>T
  hgvsp: ENST00000485637.1:c.288C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429235
  ensembl transcript: ENST00000518150
  gene symbol: ANKRD6
  hgvsc: ENST00000518150.1:c.121-20313C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429782
  ensembl transcript: ENST00000520793
  gene symbol: ANKRD6
  hgvsc: ENST00000520793.1:c.288C>T
  hgvsp: ENST00000520793.1:c.288C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000428309
  ensembl transcript: ENST00000522705
  gene symbol: ANKRD6
  hgvsc: ENST00000522705.1:c.288C>T
  hgvsp: ENST00000522705.1:c.288C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000396771
  ensembl transcript: ENST00000447838
  gene symbol: ANKRD6
  hgvsc: ENST00000447838.2:c.288C>T
  hgvsp: ENST00000447838.2:c.288C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430985
  ensembl transcript: ENST00000522441
  gene symbol: ANKRD6
  hgvsc: ENST00000522441.1:c.288C>T
  hgvsp: ENST00000522441.1:c.288C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000345767
  ensembl transcript: ENST00000339746
  gene symbol: ANKRD6
  hgvsc: ENST00000339746.4:c.288C>T
  hgvsp: ENST00000339746.4:c.288C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000083099
  ensembl protein: ENSP00000430316
  ensembl transcript: ENST00000412237
  gene symbol: LYRM2
  hgvsc: ENST00000412237.2:c.*130G>A
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429431
  ensembl transcript: ENST00000465722
  gene symbol: ANKRD6
  hgvsc: ENST00000465722.2:c.288C>T
  hgvsp: ENST00000465722.2:c.288C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000520886
  gene symbol: ANKRD6
  hgvsc: ENST00000520886.2:n.340C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000518253
  gene symbol: ANKRD6
  hgvsc: ENST00000518253.1:n.105C>T
  variant of: http://identifiers.org/hgnc/17280
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2065
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2094
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24007
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4579
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9830
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15413
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.His96His
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum

6-90312826-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90312826
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 90312826
    reference: chr 6
allele count: 1
allele frequency: 1.531112199902009e-5
allele num: 65312
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430985
  ensembl transcript: ENST00000522441
  gene symbol: ANKRD6
  hgvsc: ENST00000522441.1:c.298G>A
  hgvsp: ENSP00000430985.1:p.Ala100Thr
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429235
  ensembl transcript: ENST00000518150
  gene symbol: ANKRD6
  hgvsc: ENST00000518150.1:c.121-20303G>A
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000428377
  ensembl transcript: ENST00000523798
  gene symbol: ANKRD6
  hgvsc: ENST00000523798.1:c.298G>A
  hgvsp: ENSP00000428377.1:p.Ala100Thr
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000520886
  gene symbol: ANKRD6
  hgvsc: ENST00000520886.2:n.350G>A
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000345767
  ensembl transcript: ENST00000339746
  gene symbol: ANKRD6
  hgvsc: ENST00000339746.4:c.298G>A
  hgvsp: ENSP00000345767.4:p.Ala100Thr
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429782
  ensembl transcript: ENST00000520793
  gene symbol: ANKRD6
  hgvsc: ENST00000520793.1:c.298G>A
  hgvsp: ENSP00000429782.1:p.Ala100Thr
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000358416
  ensembl transcript: ENST00000369408
  gene symbol: ANKRD6
  hgvsc: ENST00000369408.5:c.298G>A
  hgvsp: ENSP00000358416.5:p.Ala100Thr
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430954
  ensembl transcript: ENST00000485637
  gene symbol: ANKRD6
  hgvsc: ENST00000485637.1:c.298G>A
  hgvsp: ENSP00000430954.1:p.Ala100Thr
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000428309
  ensembl transcript: ENST00000522705
  gene symbol: ANKRD6
  hgvsc: ENST00000522705.1:c.298G>A
  hgvsp: ENSP00000428309.1:p.Ala100Thr
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl transcript: ENST00000520897
  gene symbol: LYRM2
  hgvsc: ENST00000520897.1:n.562+18614C>T
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429431
  ensembl transcript: ENST00000465722
  gene symbol: ANKRD6
  hgvsc: ENST00000465722.2:c.298G>A
  hgvsp: ENSP00000429431.1:p.Ala100Thr
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000396771
  ensembl transcript: ENST00000447838
  gene symbol: ANKRD6
  hgvsc: ENST00000447838.2:c.298G>A
  hgvsp: ENSP00000396771.2:p.Ala100Thr
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000083099
  ensembl protein: ENSP00000430316
  ensembl transcript: ENST00000412237
  gene symbol: LYRM2
  hgvsc: ENST00000412237.2:c.*120C>T
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000518253
  gene symbol: ANKRD6
  hgvsc: ENST00000518253.1:n.115G>A
  variant of: http://identifiers.org/hgnc/17280
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4305
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2804
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12214
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24471
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2254
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1101
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala100Thr
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum

6-90312833-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90312833
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 90312833
    reference: chr 6
allele count: 2
allele frequency: 3.160456369899814e-5
allele num: 63282
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429431
  ensembl transcript: ENST00000465722
  gene symbol: ANKRD6
  hgvsc: ENST00000465722.2:c.305A>G
  hgvsp: ENSP00000429431.1:p.Asp102Gly
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000428377
  ensembl transcript: ENST00000523798
  gene symbol: ANKRD6
  hgvsc: ENST00000523798.1:c.305A>G
  hgvsp: ENSP00000428377.1:p.Asp102Gly
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000083099
  ensembl protein: ENSP00000430316
  ensembl transcript: ENST00000412237
  gene symbol: LYRM2
  hgvsc: ENST00000412237.2:c.*118-5T>C
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000358416
  ensembl transcript: ENST00000369408
  gene symbol: ANKRD6
  hgvsc: ENST00000369408.5:c.305A>G
  hgvsp: ENSP00000358416.5:p.Asp102Gly
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430954
  ensembl transcript: ENST00000485637
  gene symbol: ANKRD6
  hgvsc: ENST00000485637.1:c.305A>G
  hgvsp: ENSP00000430954.1:p.Asp102Gly
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430985
  ensembl transcript: ENST00000522441
  gene symbol: ANKRD6
  hgvsc: ENST00000522441.1:c.305A>G
  hgvsp: ENSP00000430985.1:p.Asp102Gly
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl transcript: ENST00000520897
  gene symbol: LYRM2
  hgvsc: ENST00000520897.1:n.562+18607T>C
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000518253
  gene symbol: ANKRD6
  hgvsc: ENST00000518253.1:n.122A>G
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000345767
  ensembl transcript: ENST00000339746
  gene symbol: ANKRD6
  hgvsc: ENST00000339746.4:c.305A>G
  hgvsp: ENSP00000345767.4:p.Asp102Gly
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000396771
  ensembl transcript: ENST00000447838
  gene symbol: ANKRD6
  hgvsc: ENST00000447838.2:c.305A>G
  hgvsp: ENSP00000396771.2:p.Asp102Gly
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000520886
  gene symbol: ANKRD6
  hgvsc: ENST00000520886.2:n.357A>G
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000428309
  ensembl transcript: ENST00000522705
  gene symbol: ANKRD6
  hgvsc: ENST00000522705.1:c.305A>G
  hgvsp: ENSP00000428309.1:p.Asp102Gly
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429235
  ensembl transcript: ENST00000518150
  gene symbol: ANKRD6
  hgvsc: ENST00000518150.1:c.121-20296A>G
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429782
  ensembl transcript: ENST00000520793
  gene symbol: ANKRD6
  hgvsc: ENST00000520793.1:c.305A>G
  hgvsp: ENSP00000429782.1:p.Asp102Gly
  variant of: http://identifiers.org/hgnc/17280
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3624
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9695
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1074
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13548
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24925
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp102Gly
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
reference allele: A
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum

6-90312836-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90312836
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 90312836
    reference: chr 6
allele count: 2
allele frequency: 3.202664616961312e-5
allele num: 62448
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000396771
  ensembl transcript: ENST00000447838
  gene symbol: ANKRD6
  hgvsc: ENST00000447838.2:c.308G>A
  hgvsp: ENSP00000396771.2:p.Arg103Lys
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000345767
  ensembl transcript: ENST00000339746
  gene symbol: ANKRD6
  hgvsc: ENST00000339746.4:c.308G>A
  hgvsp: ENSP00000345767.4:p.Arg103Lys
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430985
  ensembl transcript: ENST00000522441
  gene symbol: ANKRD6
  hgvsc: ENST00000522441.1:c.308G>A
  hgvsp: ENSP00000430985.1:p.Arg103Lys
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429431
  ensembl transcript: ENST00000465722
  gene symbol: ANKRD6
  hgvsc: ENST00000465722.2:c.308G>A
  hgvsp: ENSP00000429431.1:p.Arg103Lys
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl transcript: ENST00000520897
  gene symbol: LYRM2
  hgvsc: ENST00000520897.1:n.562+18604C>T
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429782
  ensembl transcript: ENST00000520793
  gene symbol: ANKRD6
  hgvsc: ENST00000520793.1:c.308G>A
  hgvsp: ENSP00000429782.1:p.Arg103Lys
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000428309
  ensembl transcript: ENST00000522705
  gene symbol: ANKRD6
  hgvsc: ENST00000522705.1:c.308G>A
  hgvsp: ENSP00000428309.1:p.Arg103Lys
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429235
  ensembl transcript: ENST00000518150
  gene symbol: ANKRD6
  hgvsc: ENST00000518150.1:c.121-20293G>A
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430954
  ensembl transcript: ENST00000485637
  gene symbol: ANKRD6
  hgvsc: ENST00000485637.1:c.308G>A
  hgvsp: ENSP00000430954.1:p.Arg103Lys
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000358416
  ensembl transcript: ENST00000369408
  gene symbol: ANKRD6
  hgvsc: ENST00000369408.5:c.308G>A
  hgvsp: ENSP00000358416.5:p.Arg103Lys
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000518253
  gene symbol: ANKRD6
  hgvsc: ENST00000518253.1:n.125G>A
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000520886
  gene symbol: ANKRD6
  hgvsc: ENST00000520886.2:n.360G>A
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000083099
  ensembl protein: ENSP00000430316
  ensembl transcript: ENST00000412237
  gene symbol: LYRM2
  hgvsc: ENST00000412237.2:c.*118-8C>T
  variant of: http://identifiers.org/hgnc/25229
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3856
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9193
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24977
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1071
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3911
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2265
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13816
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Arg103Lys
num of homozygotes: 0
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: G
site quality: FS
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP

6-90312843-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90312843
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 90312843
    reference: chr 6
allele count: 0
allele frequency: 0.0e0
allele num: 60584
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000520886
  gene symbol: ANKRD6
  hgvsc: ENST00000520886.2:n.367C>G
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430985
  ensembl transcript: ENST00000522441
  gene symbol: ANKRD6
  hgvsc: ENST00000522441.1:c.315C>G
  hgvsp: ENSP00000430985.1:p.Asp105Glu
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429782
  ensembl transcript: ENST00000520793
  gene symbol: ANKRD6
  hgvsc: ENST00000520793.1:c.315C>G
  hgvsp: ENSP00000429782.1:p.Asp105Glu
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000358416
  ensembl transcript: ENST00000369408
  gene symbol: ANKRD6
  hgvsc: ENST00000369408.5:c.315C>G
  hgvsp: ENSP00000358416.5:p.Asp105Glu
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000345767
  ensembl transcript: ENST00000339746
  gene symbol: ANKRD6
  hgvsc: ENST00000339746.4:c.315C>G
  hgvsp: ENSP00000345767.4:p.Asp105Glu
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl protein: ENSP00000430316
  ensembl transcript: ENST00000412237
  gene symbol: LYRM2
  hgvsc: ENST00000412237.2:c.*118-15G>C
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000518253
  gene symbol: ANKRD6
  hgvsc: ENST00000518253.1:n.132C>G
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429431
  ensembl transcript: ENST00000465722
  gene symbol: ANKRD6
  hgvsc: ENST00000465722.2:c.315C>G
  hgvsp: ENSP00000429431.1:p.Asp105Glu
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430954
  ensembl transcript: ENST00000485637
  gene symbol: ANKRD6
  hgvsc: ENST00000485637.1:c.315C>G
  hgvsp: ENSP00000430954.1:p.Asp105Glu
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000396771
  ensembl transcript: ENST00000447838
  gene symbol: ANKRD6
  hgvsc: ENST00000447838.2:c.315C>G
  hgvsp: ENSP00000396771.2:p.Asp105Glu
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000428309
  ensembl transcript: ENST00000522705
  gene symbol: ANKRD6
  hgvsc: ENST00000522705.1:c.315C>G
  hgvsp: ENSP00000428309.1:p.Asp105Glu
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429235
  ensembl transcript: ENST00000518150
  gene symbol: ANKRD6
  hgvsc: ENST00000518150.1:c.121-20286C>G
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl transcript: ENST00000520897
  gene symbol: LYRM2
  hgvsc: ENST00000520897.1:n.562+18597G>C
  variant of: http://identifiers.org/hgnc/25229
canonical: true
consequence: missense
filter: AC_Adj0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1083
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14391
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3587
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24883
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7773
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2434
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4889
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asp105Glu
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum

6-90312843-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90312843
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 90312843
    reference: chr 6
allele count: 1
allele frequency: 1.650600818698006e-5
allele num: 60584
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000428309
  ensembl transcript: ENST00000522705
  gene symbol: ANKRD6
  hgvsc: ENST00000522705.1:c.315C>T
  hgvsp: ENST00000522705.1:c.315C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429235
  ensembl transcript: ENST00000518150
  gene symbol: ANKRD6
  hgvsc: ENST00000518150.1:c.121-20286C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429431
  ensembl transcript: ENST00000465722
  gene symbol: ANKRD6
  hgvsc: ENST00000465722.2:c.315C>T
  hgvsp: ENST00000465722.2:c.315C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000518253
  gene symbol: ANKRD6
  hgvsc: ENST00000518253.1:n.132C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429782
  ensembl transcript: ENST00000520793
  gene symbol: ANKRD6
  hgvsc: ENST00000520793.1:c.315C>T
  hgvsp: ENST00000520793.1:c.315C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430985
  ensembl transcript: ENST00000522441
  gene symbol: ANKRD6
  hgvsc: ENST00000522441.1:c.315C>T
  hgvsp: ENST00000522441.1:c.315C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000358416
  ensembl transcript: ENST00000369408
  gene symbol: ANKRD6
  hgvsc: ENST00000369408.5:c.315C>T
  hgvsp: ENST00000369408.5:c.315C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000396771
  ensembl transcript: ENST00000447838
  gene symbol: ANKRD6
  hgvsc: ENST00000447838.2:c.315C>T
  hgvsp: ENST00000447838.2:c.315C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430954
  ensembl transcript: ENST00000485637
  gene symbol: ANKRD6
  hgvsc: ENST00000485637.1:c.315C>T
  hgvsp: ENST00000485637.1:c.315C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl protein: ENSP00000430316
  ensembl transcript: ENST00000412237
  gene symbol: LYRM2
  hgvsc: ENST00000412237.2:c.*118-15G>A
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000520886
  gene symbol: ANKRD6
  hgvsc: ENST00000520886.2:n.367C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000345767
  ensembl transcript: ENST00000339746
  gene symbol: ANKRD6
  hgvsc: ENST00000339746.4:c.315C>T
  hgvsp: ENST00000339746.4:c.315C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl transcript: ENST00000520897
  gene symbol: LYRM2
  hgvsc: ENST00000520897.1:n.562+18597G>A
  variant of: http://identifiers.org/hgnc/25229
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3587
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7773
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2434
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4889
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24883
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14391
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1083
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 309
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Asp105Asp
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
population: Latino
population: African
reference allele: C
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum

6-90312852-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90312852
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 90312852
    reference: chr 6
allele count: 2
allele frequency: 3.528955076401878e-5
allele num: 56674
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429782
  ensembl transcript: ENST00000520793
  gene symbol: ANKRD6
  hgvsc: ENST00000520793.1:c.318+6T>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl transcript: ENST00000520897
  gene symbol: LYRM2
  hgvsc: ENST00000520897.1:n.562+18588A>G
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429431
  ensembl transcript: ENST00000465722
  gene symbol: ANKRD6
  hgvsc: ENST00000465722.2:c.318+6T>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430985
  ensembl transcript: ENST00000522441
  gene symbol: ANKRD6
  hgvsc: ENST00000522441.1:c.318+6T>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000345767
  ensembl transcript: ENST00000339746
  gene symbol: ANKRD6
  hgvsc: ENST00000339746.4:c.318+6T>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429235
  ensembl transcript: ENST00000518150
  gene symbol: ANKRD6
  hgvsc: ENST00000518150.1:c.121-20277T>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl protein: ENSP00000430316
  ensembl transcript: ENST00000412237
  gene symbol: LYRM2
  hgvsc: ENST00000412237.2:c.*118-24A>G
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000518253
  gene symbol: ANKRD6
  hgvsc: ENST00000518253.1:n.135+6T>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000396771
  ensembl transcript: ENST00000447838
  gene symbol: ANKRD6
  hgvsc: ENST00000447838.2:c.318+6T>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000428309
  ensembl transcript: ENST00000522705
  gene symbol: ANKRD6
  hgvsc: ENST00000522705.1:c.318+6T>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000520886
  gene symbol: ANKRD6
  hgvsc: ENST00000520886.2:n.370+6T>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000358416
  ensembl transcript: ENST00000369408
  gene symbol: ANKRD6
  hgvsc: ENST00000369408.5:c.318+6T>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430954
  ensembl transcript: ENST00000485637
  gene symbol: ANKRD6
  hgvsc: ENST00000485637.1:c.318+6T>C
  variant of: http://identifiers.org/hgnc/17280
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3166
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6028
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24596
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14511
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2646
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6981
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1040
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.318+6T>C
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
reference allele: T
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP

6-90312853-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90312853
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 90312853
    reference: chr 6
allele count: 2
allele frequency: 3.574109153293541e-5
allele num: 55958
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000518253
  gene symbol: ANKRD6
  hgvsc: ENST00000518253.1:n.135+7G>A
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430985
  ensembl transcript: ENST00000522441
  gene symbol: ANKRD6
  hgvsc: ENST00000522441.1:c.318+7G>A
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl transcript: ENST00000520897
  gene symbol: LYRM2
  hgvsc: ENST00000520897.1:n.562+18587C>T
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429235
  ensembl transcript: ENST00000518150
  gene symbol: ANKRD6
  hgvsc: ENST00000518150.1:c.121-20276G>A
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000358416
  ensembl transcript: ENST00000369408
  gene symbol: ANKRD6
  hgvsc: ENST00000369408.5:c.318+7G>A
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429782
  ensembl transcript: ENST00000520793
  gene symbol: ANKRD6
  hgvsc: ENST00000520793.1:c.318+7G>A
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000345767
  ensembl transcript: ENST00000339746
  gene symbol: ANKRD6
  hgvsc: ENST00000339746.4:c.318+7G>A
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429431
  ensembl transcript: ENST00000465722
  gene symbol: ANKRD6
  hgvsc: ENST00000465722.2:c.318+7G>A
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000520886
  gene symbol: ANKRD6
  hgvsc: ENST00000520886.2:n.370+7G>A
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000396771
  ensembl transcript: ENST00000447838
  gene symbol: ANKRD6
  hgvsc: ENST00000447838.2:c.318+7G>A
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl protein: ENSP00000430316
  ensembl transcript: ENST00000412237
  gene symbol: LYRM2
  hgvsc: ENST00000412237.2:c.*118-25C>T
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000428309
  ensembl transcript: ENST00000522705
  gene symbol: ANKRD6
  hgvsc: ENST00000522705.1:c.318+7G>A
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430954
  ensembl transcript: ENST00000485637
  gene symbol: ANKRD6
  hgvsc: ENST00000485637.1:c.318+7G>A
  variant of: http://identifiers.org/hgnc/17280
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7268
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14390
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24584
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5910
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1035
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 308
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.318+7G>A
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: East Asian
population: African
population: European (Finnish)
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ

6-90312858-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90312858
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 90312858
    reference: chr 6
allele count: 1
allele frequency: 1.897893338394382e-5
allele num: 52690
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000396771
  ensembl transcript: ENST00000447838
  gene symbol: ANKRD6
  hgvsc: ENST00000447838.2:c.318+12C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000345767
  ensembl transcript: ENST00000339746
  gene symbol: ANKRD6
  hgvsc: ENST00000339746.4:c.318+12C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430985
  ensembl transcript: ENST00000522441
  gene symbol: ANKRD6
  hgvsc: ENST00000522441.1:c.318+12C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl protein: ENSP00000430316
  ensembl transcript: ENST00000412237
  gene symbol: LYRM2
  hgvsc: ENST00000412237.2:c.*118-30G>A
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430954
  ensembl transcript: ENST00000485637
  gene symbol: ANKRD6
  hgvsc: ENST00000485637.1:c.318+12C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000520886
  gene symbol: ANKRD6
  hgvsc: ENST00000520886.2:n.370+12C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429782
  ensembl transcript: ENST00000520793
  gene symbol: ANKRD6
  hgvsc: ENST00000520793.1:c.318+12C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000358416
  ensembl transcript: ENST00000369408
  gene symbol: ANKRD6
  hgvsc: ENST00000369408.5:c.318+12C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl transcript: ENST00000520897
  gene symbol: LYRM2
  hgvsc: ENST00000520897.1:n.562+18582G>A
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000428309
  ensembl transcript: ENST00000522705
  gene symbol: ANKRD6
  hgvsc: ENST00000522705.1:c.318+12C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000518253
  gene symbol: ANKRD6
  hgvsc: ENST00000518253.1:n.135+12C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429431
  ensembl transcript: ENST00000465722
  gene symbol: ANKRD6
  hgvsc: ENST00000465722.2:c.318+12C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429235
  ensembl transcript: ENST00000518150
  gene symbol: ANKRD6
  hgvsc: ENST00000518150.1:c.121-20271C>T
  variant of: http://identifiers.org/hgnc/17280
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1039
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2972
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8932
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24326
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2646
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5141
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 307
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13773
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum

6-90312863-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90312863
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 90312863
    reference: chr 6
allele count: 8644
allele frequency: 1.70077128915473e-1
allele num: 50824
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430985
  ensembl transcript: ENST00000522441
  gene symbol: ANKRD6
  hgvsc: ENST00000522441.1:c.318+17C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000428309
  ensembl transcript: ENST00000522705
  gene symbol: ANKRD6
  hgvsc: ENST00000522705.1:c.318+17C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000396771
  ensembl transcript: ENST00000447838
  gene symbol: ANKRD6
  hgvsc: ENST00000447838.2:c.318+17C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429431
  ensembl transcript: ENST00000465722
  gene symbol: ANKRD6
  hgvsc: ENST00000465722.2:c.318+17C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429782
  ensembl transcript: ENST00000520793
  gene symbol: ANKRD6
  hgvsc: ENST00000520793.1:c.318+17C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl transcript: ENST00000520897
  gene symbol: LYRM2
  hgvsc: ENST00000520897.1:n.562+18577G>A
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430954
  ensembl transcript: ENST00000485637
  gene symbol: ANKRD6
  hgvsc: ENST00000485637.1:c.318+17C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000345767
  ensembl transcript: ENST00000339746
  gene symbol: ANKRD6
  hgvsc: ENST00000339746.4:c.318+17C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl protein: ENSP00000430316
  ensembl transcript: ENST00000412237
  gene symbol: LYRM2
  hgvsc: ENST00000412237.2:c.*118-35G>A
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000358416
  ensembl transcript: ENST00000369408
  gene symbol: ANKRD6
  hgvsc: ENST00000369408.5:c.318+17C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000518253
  gene symbol: ANKRD6
  hgvsc: ENST00000518253.1:n.135+17C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429235
  ensembl transcript: ENST00000518150
  gene symbol: ANKRD6
  hgvsc: ENST00000518150.1:c.121-20266C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000520886
  gene symbol: ANKRD6
  hgvsc: ENST00000520886.2:n.370+17C>T
  variant of: http://identifiers.org/hgnc/17280
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 7.25e1
  variant carriers: 42
genotype depth: GenotypeDepth
  all individuals: 3893
  bin: 2.25e1
  variant carriers: 606
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 5.75e1
  variant carriers: 76
genotype depth: GenotypeDepth
  all individuals: 1112
  bin: 3.25e1
  variant carriers: 393
genotype depth: GenotypeDepth
  all individuals: 23465
  bin: 7.5e0
  variant carriers: 3112
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 3.75e1
  variant carriers: 356
genotype depth: GenotypeDepth
  all individuals: 2509
  bin: 2.75e1
  variant carriers: 418
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 5.25e1
  variant carriers: 118
genotype depth: GenotypeDepth
  all individuals: 10092
  bin: 2.5e0
  variant carriers: 199
genotype depth: GenotypeDepth
  all individuals: 2771
  bin: 1.75e1
  variant carriers: 1555
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.75e1
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 13710
  bin: 1.25e1
  variant carriers: 3822
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 4.75e1
  variant carriers: 184
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 6.25e1
  variant carriers: 56
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 8.75e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 6.75e1
  variant carriers: 42
genotype depth: GenotypeDepth
  all individuals: 522
  bin: 4.25e1
  variant carriers: 271
genotype quality: GenotypeQuality
num of homozygotes: 586
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
reference allele: C
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD

6-90312871-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90312871
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 90312871
    reference: chr 6
allele count: 1
allele frequency: 2.468404423380727e-5
allele num: 40512
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430985
  ensembl transcript: ENST00000522441
  gene symbol: ANKRD6
  hgvsc: ENST00000522441.1:c.318+25C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl protein: ENSP00000430316
  ensembl transcript: ENST00000412237
  gene symbol: LYRM2
  hgvsc: ENST00000412237.2:c.*118-43G>A
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000358416
  ensembl transcript: ENST00000369408
  gene symbol: ANKRD6
  hgvsc: ENST00000369408.5:c.318+25C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000520886
  gene symbol: ANKRD6
  hgvsc: ENST00000520886.2:n.370+25C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000396771
  ensembl transcript: ENST00000447838
  gene symbol: ANKRD6
  hgvsc: ENST00000447838.2:c.318+25C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000345767
  ensembl transcript: ENST00000339746
  gene symbol: ANKRD6
  hgvsc: ENST00000339746.4:c.318+25C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430954
  ensembl transcript: ENST00000485637
  gene symbol: ANKRD6
  hgvsc: ENST00000485637.1:c.318+25C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429235
  ensembl transcript: ENST00000518150
  gene symbol: ANKRD6
  hgvsc: ENST00000518150.1:c.121-20258C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000428309
  ensembl transcript: ENST00000522705
  gene symbol: ANKRD6
  hgvsc: ENST00000522705.1:c.318+25C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000518253
  gene symbol: ANKRD6
  hgvsc: ENST00000518253.1:n.135+25C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl transcript: ENST00000520897
  gene symbol: LYRM2
  hgvsc: ENST00000520897.1:n.562+18569G>A
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429782
  ensembl transcript: ENST00000520793
  gene symbol: ANKRD6
  hgvsc: ENST00000520793.1:c.318+25C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429431
  ensembl transcript: ENST00000465722
  gene symbol: ANKRD6
  hgvsc: ENST00000465722.2:c.318+25C>T
  variant of: http://identifiers.org/hgnc/17280
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1733
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3096
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14845
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24281
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10738
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1011
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2622
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: MQ

6-90312873-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90312873
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 90312873
    reference: chr 6
allele count: 1
allele frequency: 2.50388101557414e-5
allele num: 39938
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429782
  ensembl transcript: ENST00000520793
  gene symbol: ANKRD6
  hgvsc: ENST00000520793.1:c.318+27C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000428309
  ensembl transcript: ENST00000522705
  gene symbol: ANKRD6
  hgvsc: ENST00000522705.1:c.318+27C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl protein: ENSP00000430316
  ensembl transcript: ENST00000412237
  gene symbol: LYRM2
  hgvsc: ENST00000412237.2:c.*118-45G>A
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl transcript: ENST00000520897
  gene symbol: LYRM2
  hgvsc: ENST00000520897.1:n.562+18567G>A
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429431
  ensembl transcript: ENST00000465722
  gene symbol: ANKRD6
  hgvsc: ENST00000465722.2:c.318+27C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000518253
  gene symbol: ANKRD6
  hgvsc: ENST00000518253.1:n.135+27C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000396771
  ensembl transcript: ENST00000447838
  gene symbol: ANKRD6
  hgvsc: ENST00000447838.2:c.318+27C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000345767
  ensembl transcript: ENST00000339746
  gene symbol: ANKRD6
  hgvsc: ENST00000339746.4:c.318+27C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430985
  ensembl transcript: ENST00000522441
  gene symbol: ANKRD6
  hgvsc: ENST00000522441.1:c.318+27C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430954
  ensembl transcript: ENST00000485637
  gene symbol: ANKRD6
  hgvsc: ENST00000485637.1:c.318+27C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000520886
  gene symbol: ANKRD6
  hgvsc: ENST00000520886.2:n.370+27C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429235
  ensembl transcript: ENST00000518150
  gene symbol: ANKRD6
  hgvsc: ENST00000518150.1:c.121-20256C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000358416
  ensembl transcript: ENST00000369408
  gene symbol: ANKRD6
  hgvsc: ENST00000369408.5:c.318+27C>T
  variant of: http://identifiers.org/hgnc/17280
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2646
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15217
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 980
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1719
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10469
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3022
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24250
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: South Asian
reference allele: C
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum

6-90312875-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90312875
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 90312875
    reference: chr 6
allele count: 7
allele frequency: 1.796899065612486e-4
allele num: 38956
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429235
  ensembl transcript: ENST00000518150
  gene symbol: ANKRD6
  hgvsc: ENST00000518150.1:c.121-20254C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000396771
  ensembl transcript: ENST00000447838
  gene symbol: ANKRD6
  hgvsc: ENST00000447838.2:c.318+29C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430954
  ensembl transcript: ENST00000485637
  gene symbol: ANKRD6
  hgvsc: ENST00000485637.1:c.318+29C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000428309
  ensembl transcript: ENST00000522705
  gene symbol: ANKRD6
  hgvsc: ENST00000522705.1:c.318+29C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430985
  ensembl transcript: ENST00000522441
  gene symbol: ANKRD6
  hgvsc: ENST00000522441.1:c.318+29C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl transcript: ENST00000520897
  gene symbol: LYRM2
  hgvsc: ENST00000520897.1:n.562+18565G>A
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000345767
  ensembl transcript: ENST00000339746
  gene symbol: ANKRD6
  hgvsc: ENST00000339746.4:c.318+29C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl protein: ENSP00000430316
  ensembl transcript: ENST00000412237
  gene symbol: LYRM2
  hgvsc: ENST00000412237.2:c.*118-47G>A
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429431
  ensembl transcript: ENST00000465722
  gene symbol: ANKRD6
  hgvsc: ENST00000465722.2:c.318+29C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000358416
  ensembl transcript: ENST00000369408
  gene symbol: ANKRD6
  hgvsc: ENST00000369408.5:c.318+29C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000520886
  gene symbol: ANKRD6
  hgvsc: ENST00000520886.2:n.370+29C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000518253
  gene symbol: ANKRD6
  hgvsc: ENST00000518253.1:n.135+29C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429782
  ensembl transcript: ENST00000520793
  gene symbol: ANKRD6
  hgvsc: ENST00000520793.1:c.318+29C>T
  variant of: http://identifiers.org/hgnc/17280
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1802
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2590
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 409
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 953
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2910
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24186
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10098
  bin: 1.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15716
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Latino
population: East Asian
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ

6-90312880-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90312880
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 90312880
    reference: chr 6
allele count: 1
allele frequency: 2.828374250480823e-5
allele num: 35356
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429782
  ensembl transcript: ENST00000520793
  gene symbol: ANKRD6
  hgvsc: ENST00000520793.1:c.318+34G>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000518253
  gene symbol: ANKRD6
  hgvsc: ENST00000518253.1:n.135+34G>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429235
  ensembl transcript: ENST00000518150
  gene symbol: ANKRD6
  hgvsc: ENST00000518150.1:c.121-20249G>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430985
  ensembl transcript: ENST00000522441
  gene symbol: ANKRD6
  hgvsc: ENST00000522441.1:c.318+34G>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl transcript: ENST00000520897
  gene symbol: LYRM2
  hgvsc: ENST00000520897.1:n.562+18560C>A
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429431
  ensembl transcript: ENST00000465722
  gene symbol: ANKRD6
  hgvsc: ENST00000465722.2:c.318+34G>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000345767
  ensembl transcript: ENST00000339746
  gene symbol: ANKRD6
  hgvsc: ENST00000339746.4:c.318+34G>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000520886
  gene symbol: ANKRD6
  hgvsc: ENST00000520886.2:n.370+34G>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000358416
  ensembl transcript: ENST00000369408
  gene symbol: ANKRD6
  hgvsc: ENST00000369408.5:c.318+34G>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl protein: ENSP00000430316
  ensembl transcript: ENST00000412237
  gene symbol: LYRM2
  hgvsc: ENST00000412237.2:c.*118-52C>A
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000428309
  ensembl transcript: ENST00000522705
  gene symbol: ANKRD6
  hgvsc: ENST00000522705.1:c.318+34G>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430954
  ensembl transcript: ENST00000485637
  gene symbol: ANKRD6
  hgvsc: ENST00000485637.1:c.318+34G>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000396771
  ensembl transcript: ENST00000447838
  gene symbol: ANKRD6
  hgvsc: ENST00000447838.2:c.318+34G>T
  variant of: http://identifiers.org/hgnc/17280
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2273
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 897
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24704
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16780
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2643
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2241
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8520
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: African
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff

6-90312886-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90312886
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 90312886
    reference: chr 6
allele count: 22
allele frequency: 6.904343459703741e-4
allele num: 31864
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl protein: ENSP00000430316
  ensembl transcript: ENST00000412237
  gene symbol: LYRM2
  hgvsc: ENST00000412237.2:c.*118-58C>T
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000428309
  ensembl transcript: ENST00000522705
  gene symbol: ANKRD6
  hgvsc: ENST00000522705.1:c.318+40G>A
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429431
  ensembl transcript: ENST00000465722
  gene symbol: ANKRD6
  hgvsc: ENST00000465722.2:c.318+40G>A
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430985
  ensembl transcript: ENST00000522441
  gene symbol: ANKRD6
  hgvsc: ENST00000522441.1:c.318+40G>A
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl transcript: ENST00000520897
  gene symbol: LYRM2
  hgvsc: ENST00000520897.1:n.562+18554C>T
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429235
  ensembl transcript: ENST00000518150
  gene symbol: ANKRD6
  hgvsc: ENST00000518150.1:c.121-20243G>A
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429782
  ensembl transcript: ENST00000520793
  gene symbol: ANKRD6
  hgvsc: ENST00000520793.1:c.318+40G>A
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000345767
  ensembl transcript: ENST00000339746
  gene symbol: ANKRD6
  hgvsc: ENST00000339746.4:c.318+40G>A
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000520886
  gene symbol: ANKRD6
  hgvsc: ENST00000520886.2:n.370+40G>A
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000396771
  ensembl transcript: ENST00000447838
  gene symbol: ANKRD6
  hgvsc: ENST00000447838.2:c.318+40G>A
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000358416
  ensembl transcript: ENST00000369408
  gene symbol: ANKRD6
  hgvsc: ENST00000369408.5:c.318+40G>A
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000518253
  gene symbol: ANKRD6
  hgvsc: ENST00000518253.1:n.135+40G>A
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430954
  ensembl transcript: ENST00000485637
  gene symbol: ANKRD6
  hgvsc: ENST00000485637.1:c.318+40G>A
  variant of: http://identifiers.org/hgnc/17280
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 4.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16972
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2531
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1969
  bin: 2.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7275
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2473
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25657
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: African
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: QD

6-90312886-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90312886
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 90312886
    reference: chr 6
allele count: 1
allele frequency: 3.138337936228973e-5
allele num: 31864
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000396771
  ensembl transcript: ENST00000447838
  gene symbol: ANKRD6
  hgvsc: ENST00000447838.2:c.318+40G>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429235
  ensembl transcript: ENST00000518150
  gene symbol: ANKRD6
  hgvsc: ENST00000518150.1:c.121-20243G>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430985
  ensembl transcript: ENST00000522441
  gene symbol: ANKRD6
  hgvsc: ENST00000522441.1:c.318+40G>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl protein: ENSP00000430316
  ensembl transcript: ENST00000412237
  gene symbol: LYRM2
  hgvsc: ENST00000412237.2:c.*118-58C>G
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl transcript: ENST00000520897
  gene symbol: LYRM2
  hgvsc: ENST00000520897.1:n.562+18554C>G
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430954
  ensembl transcript: ENST00000485637
  gene symbol: ANKRD6
  hgvsc: ENST00000485637.1:c.318+40G>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429431
  ensembl transcript: ENST00000465722
  gene symbol: ANKRD6
  hgvsc: ENST00000465722.2:c.318+40G>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000518253
  gene symbol: ANKRD6
  hgvsc: ENST00000518253.1:n.135+40G>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000345767
  ensembl transcript: ENST00000339746
  gene symbol: ANKRD6
  hgvsc: ENST00000339746.4:c.318+40G>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000428309
  ensembl transcript: ENST00000522705
  gene symbol: ANKRD6
  hgvsc: ENST00000522705.1:c.318+40G>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429782
  ensembl transcript: ENST00000520793
  gene symbol: ANKRD6
  hgvsc: ENST00000520793.1:c.318+40G>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000358416
  ensembl transcript: ENST00000369408
  gene symbol: ANKRD6
  hgvsc: ENST00000369408.5:c.318+40G>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000520886
  gene symbol: ANKRD6
  hgvsc: ENST00000520886.2:n.370+40G>C
  variant of: http://identifiers.org/hgnc/17280
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25657
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7275
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16972
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 73
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2473
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1969
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2531
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ

6-90312890-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90312890
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 90312890
    reference: chr 6
allele count: 0
allele frequency: 0.0e0
allele num: 31868
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl transcript: ENST00000520897
  gene symbol: LYRM2
  hgvsc: ENST00000520897.1:n.562+18550G>A
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl protein: ENSP00000430316
  ensembl transcript: ENST00000412237
  gene symbol: LYRM2
  hgvsc: ENST00000412237.2:c.*118-62G>A
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430985
  ensembl transcript: ENST00000522441
  gene symbol: ANKRD6
  hgvsc: ENST00000522441.1:c.318+44C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000396771
  ensembl transcript: ENST00000447838
  gene symbol: ANKRD6
  hgvsc: ENST00000447838.2:c.318+44C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000518253
  gene symbol: ANKRD6
  hgvsc: ENST00000518253.1:n.135+44C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000345767
  ensembl transcript: ENST00000339746
  gene symbol: ANKRD6
  hgvsc: ENST00000339746.4:c.318+44C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429431
  ensembl transcript: ENST00000465722
  gene symbol: ANKRD6
  hgvsc: ENST00000465722.2:c.318+44C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000358416
  ensembl transcript: ENST00000369408
  gene symbol: ANKRD6
  hgvsc: ENST00000369408.5:c.318+44C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429782
  ensembl transcript: ENST00000520793
  gene symbol: ANKRD6
  hgvsc: ENST00000520793.1:c.318+44C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000520886
  gene symbol: ANKRD6
  hgvsc: ENST00000520886.2:n.370+44C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000428309
  ensembl transcript: ENST00000522705
  gene symbol: ANKRD6
  hgvsc: ENST00000522705.1:c.318+44C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430954
  ensembl transcript: ENST00000485637
  gene symbol: ANKRD6
  hgvsc: ENST00000485637.1:c.318+44C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429235
  ensembl transcript: ENST00000518150
  gene symbol: ANKRD6
  hgvsc: ENST00000518150.1:c.121-20239C>T
  variant of: http://identifiers.org/hgnc/17280
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26126
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6764
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2611
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16986
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1875
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: Other
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD

6-90312892-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90312892
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 90312892
    reference: chr 6
allele count: 18
allele frequency: 5.719733079122975e-4
allele num: 31470
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl transcript: ENST00000520897
  gene symbol: LYRM2
  hgvsc: ENST00000520897.1:n.562+18548T>C
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430985
  ensembl transcript: ENST00000522441
  gene symbol: ANKRD6
  hgvsc: ENST00000522441.1:c.318+46A>G
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl protein: ENSP00000430316
  ensembl transcript: ENST00000412237
  gene symbol: LYRM2
  hgvsc: ENST00000412237.2:c.*118-64T>C
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000518253
  gene symbol: ANKRD6
  hgvsc: ENST00000518253.1:n.135+46A>G
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000520886
  gene symbol: ANKRD6
  hgvsc: ENST00000520886.2:n.370+46A>G
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000428309
  ensembl transcript: ENST00000522705
  gene symbol: ANKRD6
  hgvsc: ENST00000522705.1:c.318+46A>G
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430954
  ensembl transcript: ENST00000485637
  gene symbol: ANKRD6
  hgvsc: ENST00000485637.1:c.318+46A>G
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000345767
  ensembl transcript: ENST00000339746
  gene symbol: ANKRD6
  hgvsc: ENST00000339746.4:c.318+46A>G
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000396771
  ensembl transcript: ENST00000447838
  gene symbol: ANKRD6
  hgvsc: ENST00000447838.2:c.318+46A>G
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429782
  ensembl transcript: ENST00000520793
  gene symbol: ANKRD6
  hgvsc: ENST00000520793.1:c.318+46A>G
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429431
  ensembl transcript: ENST00000465722
  gene symbol: ANKRD6
  hgvsc: ENST00000465722.2:c.318+46A>G
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429235
  ensembl transcript: ENST00000518150
  gene symbol: ANKRD6
  hgvsc: ENST00000518150.1:c.121-20237A>G
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000358416
  ensembl transcript: ENST00000369408
  gene symbol: ANKRD6
  hgvsc: ENST00000369408.5:c.318+46A>G
  variant of: http://identifiers.org/hgnc/17280
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2681
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1847
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26302
  bin: 7.5e0
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16979
  bin: 2.5e0
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2389
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: QD

6-90312893-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90312893
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 90312893
    reference: chr 6
allele count: 1
allele frequency: 3.234571095872687e-5
allele num: 30916
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000345767
  ensembl transcript: ENST00000339746
  gene symbol: ANKRD6
  hgvsc: ENST00000339746.4:c.318+47G>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000428309
  ensembl transcript: ENST00000522705
  gene symbol: ANKRD6
  hgvsc: ENST00000522705.1:c.318+47G>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl protein: ENSP00000430316
  ensembl transcript: ENST00000412237
  gene symbol: LYRM2
  hgvsc: ENST00000412237.2:c.*118-65C>A
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429782
  ensembl transcript: ENST00000520793
  gene symbol: ANKRD6
  hgvsc: ENST00000520793.1:c.318+47G>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430985
  ensembl transcript: ENST00000522441
  gene symbol: ANKRD6
  hgvsc: ENST00000522441.1:c.318+47G>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000518253
  gene symbol: ANKRD6
  hgvsc: ENST00000518253.1:n.135+47G>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl transcript: ENST00000520897
  gene symbol: LYRM2
  hgvsc: ENST00000520897.1:n.562+18547C>A
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430954
  ensembl transcript: ENST00000485637
  gene symbol: ANKRD6
  hgvsc: ENST00000485637.1:c.318+47G>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429431
  ensembl transcript: ENST00000465722
  gene symbol: ANKRD6
  hgvsc: ENST00000465722.2:c.318+47G>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429235
  ensembl transcript: ENST00000518150
  gene symbol: ANKRD6
  hgvsc: ENST00000518150.1:c.121-20236G>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000396771
  ensembl transcript: ENST00000447838
  gene symbol: ANKRD6
  hgvsc: ENST00000447838.2:c.318+47G>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000520886
  gene symbol: ANKRD6
  hgvsc: ENST00000520886.2:n.370+47G>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000358416
  ensembl transcript: ENST00000369408
  gene symbol: ANKRD6
  hgvsc: ENST00000369408.5:c.318+47G>T
  variant of: http://identifiers.org/hgnc/17280
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2387
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 359
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16975
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26446
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 177
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6377
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2740
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1795
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 76
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: Other
population: Latino
population: European (Finnish)
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/6-90315686-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90315686
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 90315686
    reference: chr 6
allele count: 1
allele frequency: 3.202049311559398e-5
allele num: 31230
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000428309
  ensembl transcript: ENST00000522705
  gene symbol: ANKRD6
  hgvsc: ENST00000522705.1:c.319-40C>A
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl protein: ENSP00000430316
  ensembl transcript: ENST00000412237
  gene symbol: LYRM2
  hgvsc: ENST00000412237.2:c.*118-2858G>T
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429782
  ensembl transcript: ENST00000520793
  gene symbol: ANKRD6
  hgvsc: ENST00000520793.1:c.318+2840C>A
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430985
  ensembl transcript: ENST00000522441
  gene symbol: ANKRD6
  hgvsc: ENST00000522441.1:c.319-40C>A
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430954
  ensembl transcript: ENST00000485637
  gene symbol: ANKRD6
  hgvsc: ENST00000485637.1:c.319-40C>A
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000345767
  ensembl transcript: ENST00000339746
  gene symbol: ANKRD6
  hgvsc: ENST00000339746.4:c.319-40C>A
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl transcript: ENST00000520897
  gene symbol: LYRM2
  hgvsc: ENST00000520897.1:n.562+15754G>T
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000520886
  gene symbol: ANKRD6
  hgvsc: ENST00000520886.2:n.371-40C>A
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000358416
  ensembl transcript: ENST00000369408
  gene symbol: ANKRD6
  hgvsc: ENST00000369408.5:c.319-40C>A
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429235
  ensembl transcript: ENST00000518150
  gene symbol: ANKRD6
  hgvsc: ENST00000518150.1:c.121-17443C>A
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429431
  ensembl transcript: ENST00000465722
  gene symbol: ANKRD6
  hgvsc: ENST00000465722.2:c.319-40C>A
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000518253
  gene symbol: ANKRD6
  hgvsc: ENST00000518253.1:n.136-40C>A
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000396771
  ensembl transcript: ENST00000447838
  gene symbol: ANKRD6
  hgvsc: ENST00000447838.2:c.319-40C>A
  variant of: http://identifiers.org/hgnc/17280
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 249
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17218
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26874
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1783
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7401
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2196
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: South Asian
population: Latino
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum

6-90315694-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90315694
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 90315694
    reference: chr 6
allele count: 1
allele frequency: 3.047108294228777e-5
allele num: 32818
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000518253
  gene symbol: ANKRD6
  hgvsc: ENST00000518253.1:n.136-32A>G
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl protein: ENSP00000430316
  ensembl transcript: ENST00000412237
  gene symbol: LYRM2
  hgvsc: ENST00000412237.2:c.*118-2866T>C
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430985
  ensembl transcript: ENST00000522441
  gene symbol: ANKRD6
  hgvsc: ENST00000522441.1:c.319-32A>G
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000520886
  gene symbol: ANKRD6
  hgvsc: ENST00000520886.2:n.371-32A>G
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430954
  ensembl transcript: ENST00000485637
  gene symbol: ANKRD6
  hgvsc: ENST00000485637.1:c.319-32A>G
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl transcript: ENST00000520897
  gene symbol: LYRM2
  hgvsc: ENST00000520897.1:n.562+15746T>C
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429782
  ensembl transcript: ENST00000520793
  gene symbol: ANKRD6
  hgvsc: ENST00000520793.1:c.318+2848A>G
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000396771
  ensembl transcript: ENST00000447838
  gene symbol: ANKRD6
  hgvsc: ENST00000447838.2:c.319-32A>G
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000428309
  ensembl transcript: ENST00000522705
  gene symbol: ANKRD6
  hgvsc: ENST00000522705.1:c.319-32A>G
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000345767
  ensembl transcript: ENST00000339746
  gene symbol: ANKRD6
  hgvsc: ENST00000339746.4:c.319-32A>G
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000358416
  ensembl transcript: ENST00000369408
  gene symbol: ANKRD6
  hgvsc: ENST00000369408.5:c.319-32A>G
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429235
  ensembl transcript: ENST00000518150
  gene symbol: ANKRD6
  hgvsc: ENST00000518150.1:c.121-17435A>G
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429431
  ensembl transcript: ENST00000465722
  gene symbol: ANKRD6
  hgvsc: ENST00000465722.2:c.319-32A>G
  variant of: http://identifiers.org/hgnc/17280
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3419
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1204
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13892
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29611
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7394
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: African
population: Latino
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: QD

6-90315705-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90315705
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 90315705
    reference: chr 6
allele count: 2
allele frequency: 5.613247263541959e-5
allele num: 35630
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000345767
  ensembl transcript: ENST00000339746
  gene symbol: ANKRD6
  hgvsc: ENST00000339746.4:c.319-21C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000396771
  ensembl transcript: ENST00000447838
  gene symbol: ANKRD6
  hgvsc: ENST00000447838.2:c.319-21C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430954
  ensembl transcript: ENST00000485637
  gene symbol: ANKRD6
  hgvsc: ENST00000485637.1:c.319-21C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl transcript: ENST00000520897
  gene symbol: LYRM2
  hgvsc: ENST00000520897.1:n.562+15735G>A
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429431
  ensembl transcript: ENST00000465722
  gene symbol: ANKRD6
  hgvsc: ENST00000465722.2:c.319-21C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430985
  ensembl transcript: ENST00000522441
  gene symbol: ANKRD6
  hgvsc: ENST00000522441.1:c.319-21C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000428309
  ensembl transcript: ENST00000522705
  gene symbol: ANKRD6
  hgvsc: ENST00000522705.1:c.319-21C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429235
  ensembl transcript: ENST00000518150
  gene symbol: ANKRD6
  hgvsc: ENST00000518150.1:c.121-17424C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000358416
  ensembl transcript: ENST00000369408
  gene symbol: ANKRD6
  hgvsc: ENST00000369408.5:c.319-21C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl protein: ENSP00000430316
  ensembl transcript: ENST00000412237
  gene symbol: LYRM2
  hgvsc: ENST00000412237.2:c.*118-2877G>A
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429782
  ensembl transcript: ENST00000520793
  gene symbol: ANKRD6
  hgvsc: ENST00000520793.1:c.318+2859C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000520886
  gene symbol: ANKRD6
  hgvsc: ENST00000520886.2:n.371-21C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000518253
  gene symbol: ANKRD6
  hgvsc: ENST00000518253.1:n.136-21C>T
  variant of: http://identifiers.org/hgnc/17280
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1043
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6993
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9300
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32762
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5177
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1011
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum

6-90315710-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90315710
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 90315710
    reference: chr 6
allele count: 17
allele frequency: 4.471330878485008e-4
allele num: 38020
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000518253
  gene symbol: ANKRD6
  hgvsc: ENST00000518253.1:n.136-16T>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430985
  ensembl transcript: ENST00000522441
  gene symbol: ANKRD6
  hgvsc: ENST00000522441.1:c.319-16T>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000358416
  ensembl transcript: ENST00000369408
  gene symbol: ANKRD6
  hgvsc: ENST00000369408.5:c.319-16T>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl protein: ENSP00000430316
  ensembl transcript: ENST00000412237
  gene symbol: LYRM2
  hgvsc: ENST00000412237.2:c.*118-2882A>G
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000428309
  ensembl transcript: ENST00000522705
  gene symbol: ANKRD6
  hgvsc: ENST00000522705.1:c.319-16T>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429235
  ensembl transcript: ENST00000518150
  gene symbol: ANKRD6
  hgvsc: ENST00000518150.1:c.121-17419T>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000345767
  ensembl transcript: ENST00000339746
  gene symbol: ANKRD6
  hgvsc: ENST00000339746.4:c.319-16T>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430954
  ensembl transcript: ENST00000485637
  gene symbol: ANKRD6
  hgvsc: ENST00000485637.1:c.319-16T>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429431
  ensembl transcript: ENST00000465722
  gene symbol: ANKRD6
  hgvsc: ENST00000465722.2:c.319-16T>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000396771
  ensembl transcript: ENST00000447838
  gene symbol: ANKRD6
  hgvsc: ENST00000447838.2:c.319-16T>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429782
  ensembl transcript: ENST00000520793
  gene symbol: ANKRD6
  hgvsc: ENST00000520793.1:c.318+2864T>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000520886
  gene symbol: ANKRD6
  hgvsc: ENST00000520886.2:n.371-16T>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl transcript: ENST00000520897
  gene symbol: LYRM2
  hgvsc: ENST00000520897.1:n.562+15730A>G
  variant of: http://identifiers.org/hgnc/25229
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33314
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7579
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6725
  bin: 1.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6349
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1065
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1244
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
reference allele: T
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD

http://identifiers.org/exac.variant/6-90315721-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90315721
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 90315721
    reference: chr 6
allele count: 2
allele frequency: 4.617657923900997e-5
allele num: 43312
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl transcript: ENST00000520897
  gene symbol: LYRM2
  hgvsc: ENST00000520897.1:n.562+15719G>T
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429235
  ensembl transcript: ENST00000518150
  gene symbol: ANKRD6
  hgvsc: ENST00000518150.1:c.121-17408C>A
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000396771
  ensembl transcript: ENST00000447838
  gene symbol: ANKRD6
  hgvsc: ENST00000447838.2:c.319-5C>A
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000345767
  ensembl transcript: ENST00000339746
  gene symbol: ANKRD6
  hgvsc: ENST00000339746.4:c.319-5C>A
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl protein: ENSP00000430316
  ensembl transcript: ENST00000412237
  gene symbol: LYRM2
  hgvsc: ENST00000412237.2:c.*118-2893G>T
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429782
  ensembl transcript: ENST00000520793
  gene symbol: ANKRD6
  hgvsc: ENST00000520793.1:c.318+2875C>A
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000518253
  gene symbol: ANKRD6
  hgvsc: ENST00000518253.1:n.136-5C>A
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000428309
  ensembl transcript: ENST00000522705
  gene symbol: ANKRD6
  hgvsc: ENST00000522705.1:c.319-5C>A
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430985
  ensembl transcript: ENST00000522441
  gene symbol: ANKRD6
  hgvsc: ENST00000522441.1:c.319-5C>A
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000358416
  ensembl transcript: ENST00000369408
  gene symbol: ANKRD6
  hgvsc: ENST00000369408.5:c.319-5C>A
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000520886
  gene symbol: ANKRD6
  hgvsc: ENST00000520886.2:n.371-5C>A
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430954
  ensembl transcript: ENST00000485637
  gene symbol: ANKRD6
  hgvsc: ENST00000485637.1:c.319-5C>A
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429431
  ensembl transcript: ENST00000465722
  gene symbol: ANKRD6
  hgvsc: ENST00000465722.2:c.319-5C>A
  variant of: http://identifiers.org/hgnc/17280
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5042
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1513
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6241
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.319-5C>A
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: African
reference allele: C
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum

6-90315723-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90315723
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 90315723
    reference: chr 6
allele count: 0
allele frequency: 0.0e0
allele num: 44420
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl protein: ENSP00000430316
  ensembl transcript: ENST00000412237
  gene symbol: LYRM2
  hgvsc: ENST00000412237.2:c.*118-2895A>G
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429782
  ensembl transcript: ENST00000520793
  gene symbol: ANKRD6
  hgvsc: ENST00000520793.1:c.318+2877T>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000518253
  gene symbol: ANKRD6
  hgvsc: ENST00000518253.1:n.136-3T>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000520886
  gene symbol: ANKRD6
  hgvsc: ENST00000520886.2:n.371-3T>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429431
  ensembl transcript: ENST00000465722
  gene symbol: ANKRD6
  hgvsc: ENST00000465722.2:c.319-3T>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000396771
  ensembl transcript: ENST00000447838
  gene symbol: ANKRD6
  hgvsc: ENST00000447838.2:c.319-3T>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000428309
  ensembl transcript: ENST00000522705
  gene symbol: ANKRD6
  hgvsc: ENST00000522705.1:c.319-3T>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429235
  ensembl transcript: ENST00000518150
  gene symbol: ANKRD6
  hgvsc: ENST00000518150.1:c.121-17406T>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl transcript: ENST00000520897
  gene symbol: LYRM2
  hgvsc: ENST00000520897.1:n.562+15717A>G
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000345767
  ensembl transcript: ENST00000339746
  gene symbol: ANKRD6
  hgvsc: ENST00000339746.4:c.319-3T>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430985
  ensembl transcript: ENST00000522441
  gene symbol: ANKRD6
  hgvsc: ENST00000522441.1:c.319-3T>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430954
  ensembl transcript: ENST00000485637
  gene symbol: ANKRD6
  hgvsc: ENST00000485637.1:c.319-3T>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000358416
  ensembl transcript: ENST00000369408
  gene symbol: ANKRD6
  hgvsc: ENST00000369408.5:c.319-3T>C
  variant of: http://identifiers.org/hgnc/17280
canonical: true
consequence: splice region
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33296
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9565
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1549
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4736
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.319-3T>C
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: T
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: ClippingRankSum

6-90315752-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90315752
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 90315752
    reference: chr 6
allele count: 2
allele frequency: 3.569771177667512e-5
allele num: 56026
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430954
  ensembl transcript: ENST00000485637
  gene symbol: ANKRD6
  hgvsc: ENST00000485637.1:c.345A>T
  hgvsp: ENST00000485637.1:c.345A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000520886
  gene symbol: ANKRD6
  hgvsc: ENST00000520886.2:n.397A>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000345767
  ensembl transcript: ENST00000339746
  gene symbol: ANKRD6
  hgvsc: ENST00000339746.4:c.345A>T
  hgvsp: ENST00000339746.4:c.345A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000396771
  ensembl transcript: ENST00000447838
  gene symbol: ANKRD6
  hgvsc: ENST00000447838.2:c.345A>T
  hgvsp: ENST00000447838.2:c.345A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430985
  ensembl transcript: ENST00000522441
  gene symbol: ANKRD6
  hgvsc: ENST00000522441.1:c.345A>T
  hgvsp: ENST00000522441.1:c.345A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl protein: ENSP00000430316
  ensembl transcript: ENST00000412237
  gene symbol: LYRM2
  hgvsc: ENST00000412237.2:c.*118-2924T>A
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000428309
  ensembl transcript: ENST00000522705
  gene symbol: ANKRD6
  hgvsc: ENST00000522705.1:c.345A>T
  hgvsp: ENST00000522705.1:c.345A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl transcript: ENST00000520897
  gene symbol: LYRM2
  hgvsc: ENST00000520897.1:n.562+15688T>A
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000358416
  ensembl transcript: ENST00000369408
  gene symbol: ANKRD6
  hgvsc: ENST00000369408.5:c.345A>T
  hgvsp: ENST00000369408.5:c.345A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429431
  ensembl transcript: ENST00000465722
  gene symbol: ANKRD6
  hgvsc: ENST00000465722.2:c.345A>T
  hgvsp: ENST00000465722.2:c.345A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429235
  ensembl transcript: ENST00000518150
  gene symbol: ANKRD6
  hgvsc: ENST00000518150.1:c.121-17377A>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429782
  ensembl transcript: ENST00000520793
  gene symbol: ANKRD6
  hgvsc: ENST00000520793.1:c.318+2906A>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000518253
  gene symbol: ANKRD6
  hgvsc: ENST00000518253.1:n.162A>T
  variant of: http://identifiers.org/hgnc/17280
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2198
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7477
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2508
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3159
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 803
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29125
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala115Ala
num of homozygotes: 0
population: South Asian
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: A
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: MQ

6-90315760-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90315760
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 90315760
    reference: chr 6
allele count: 1
allele frequency: 1.732081615685731e-5
allele num: 57734
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429431
  ensembl transcript: ENST00000465722
  gene symbol: ANKRD6
  hgvsc: ENST00000465722.2:c.353A>G
  hgvsp: ENSP00000429431.1:p.His118Arg
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000396771
  ensembl transcript: ENST00000447838
  gene symbol: ANKRD6
  hgvsc: ENST00000447838.2:c.353A>G
  hgvsp: ENSP00000396771.2:p.His118Arg
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430985
  ensembl transcript: ENST00000522441
  gene symbol: ANKRD6
  hgvsc: ENST00000522441.1:c.353A>G
  hgvsp: ENSP00000430985.1:p.His118Arg
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000428309
  ensembl transcript: ENST00000522705
  gene symbol: ANKRD6
  hgvsc: ENST00000522705.1:c.353A>G
  hgvsp: ENSP00000428309.1:p.His118Arg
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000358416
  ensembl transcript: ENST00000369408
  gene symbol: ANKRD6
  hgvsc: ENST00000369408.5:c.353A>G
  hgvsp: ENSP00000358416.5:p.His118Arg
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000345767
  ensembl transcript: ENST00000339746
  gene symbol: ANKRD6
  hgvsc: ENST00000339746.4:c.353A>G
  hgvsp: ENSP00000345767.4:p.His118Arg
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430954
  ensembl transcript: ENST00000485637
  gene symbol: ANKRD6
  hgvsc: ENST00000485637.1:c.353A>G
  hgvsp: ENSP00000430954.1:p.His118Arg
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429235
  ensembl transcript: ENST00000518150
  gene symbol: ANKRD6
  hgvsc: ENST00000518150.1:c.121-17369A>G
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000520886
  gene symbol: ANKRD6
  hgvsc: ENST00000520886.2:n.405A>G
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl protein: ENSP00000430316
  ensembl transcript: ENST00000412237
  gene symbol: LYRM2
  hgvsc: ENST00000412237.2:c.*118-2932T>C
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl transcript: ENST00000520897
  gene symbol: LYRM2
  hgvsc: ENST00000520897.1:n.562+15680T>C
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000518253
  gene symbol: ANKRD6
  hgvsc: ENST00000518253.1:n.170A>G
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429782
  ensembl transcript: ENST00000520793
  gene symbol: ANKRD6
  hgvsc: ENST00000520793.1:c.318+2914A>G
  variant of: http://identifiers.org/hgnc/17280
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2318
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10688
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28154
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3432
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8215
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 839
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3205
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.His118Arg
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP

6-90315764-TTTCA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90315764
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 90315760
    reference: chr 6
allele count: 2
allele frequency: 3.429237680463633e-5
allele num: 58322
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000518253
  gene symbol: ANKRD6
  hgvsc: ENST00000518253.1:n.175_178delTTCA
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000358416
  ensembl transcript: ENST00000369408
  gene symbol: ANKRD6
  hgvsc: ENST00000369408.5:c.358_361delTTCA
  hgvsp: ENSP00000358416.5:p.Phe120AlafsTer97
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429782
  ensembl transcript: ENST00000520793
  gene symbol: ANKRD6
  hgvsc: ENST00000520793.1:c.318+2919_318+2922delTTCA
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429235
  ensembl transcript: ENST00000518150
  gene symbol: ANKRD6
  hgvsc: ENST00000518150.1:c.121-17364_121-17361delTTCA
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429431
  ensembl transcript: ENST00000465722
  gene symbol: ANKRD6
  hgvsc: ENST00000465722.2:c.358_361delTTCA
  hgvsp: ENSP00000429431.1:p.Phe120AlafsTer?
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430985
  ensembl transcript: ENST00000522441
  gene symbol: ANKRD6
  hgvsc: ENST00000522441.1:c.358_361delTTCA
  hgvsp: ENSP00000430985.1:p.Phe120AlafsTer97
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000345767
  ensembl transcript: ENST00000339746
  gene symbol: ANKRD6
  hgvsc: ENST00000339746.4:c.358_361delTTCA
  hgvsp: ENSP00000345767.4:p.Phe120AlafsTer97
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430954
  ensembl transcript: ENST00000485637
  gene symbol: ANKRD6
  hgvsc: ENST00000485637.1:c.358_361delTTCA
  hgvsp: ENSP00000430954.1:p.Phe120AlafsTer97
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000396771
  ensembl transcript: ENST00000447838
  gene symbol: ANKRD6
  hgvsc: ENST00000447838.2:c.358_361delTTCA
  hgvsp: ENSP00000396771.2:p.Phe120AlafsTer97
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000520886
  gene symbol: ANKRD6
  hgvsc: ENST00000520886.2:n.410_413delTTCA
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl transcript: ENST00000520897
  gene symbol: LYRM2
  hgvsc: ENST00000520897.1:n.562+15672_562+15675delTGAA
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl protein: ENSP00000430316
  ensembl transcript: ENST00000412237
  gene symbol: LYRM2
  hgvsc: ENST00000412237.2:c.*118-2940_*118-2937delTGAA
  variant of: http://identifiers.org/hgnc/25229
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 8512
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9993
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27741
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2367
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3273
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 291
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Phe120AlafsTer97
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: TTTCA
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP

6-90315771-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90315771
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 90315771
    reference: chr 6
allele count: 3905
allele frequency: 6.355587383223202e-2
allele num: 61442
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000345767
  ensembl transcript: ENST00000339746
  gene symbol: ANKRD6
  hgvsc: ENST00000339746.4:c.364C>G
  hgvsp: ENSP00000345767.4:p.Gln122Glu
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430985
  ensembl transcript: ENST00000522441
  gene symbol: ANKRD6
  hgvsc: ENST00000522441.1:c.364C>G
  hgvsp: ENSP00000430985.1:p.Gln122Glu
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000358416
  ensembl transcript: ENST00000369408
  gene symbol: ANKRD6
  hgvsc: ENST00000369408.5:c.364C>G
  hgvsp: ENSP00000358416.5:p.Gln122Glu
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429235
  ensembl transcript: ENST00000518150
  gene symbol: ANKRD6
  hgvsc: ENST00000518150.1:c.121-17358C>G
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000396771
  ensembl transcript: ENST00000447838
  gene symbol: ANKRD6
  hgvsc: ENST00000447838.2:c.364C>G
  hgvsp: ENSP00000396771.2:p.Gln122Glu
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429431
  ensembl transcript: ENST00000465722
  gene symbol: ANKRD6
  hgvsc: ENST00000465722.2:c.364C>G
  hgvsp: ENSP00000429431.1:p.Gln122Glu
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl protein: ENSP00000430316
  ensembl transcript: ENST00000412237
  gene symbol: LYRM2
  hgvsc: ENST00000412237.2:c.*118-2943G>C
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430954
  ensembl transcript: ENST00000485637
  gene symbol: ANKRD6
  hgvsc: ENST00000485637.1:c.364C>G
  hgvsp: ENSP00000430954.1:p.Gln122Glu
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000520886
  gene symbol: ANKRD6
  hgvsc: ENST00000520886.2:n.416C>G
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl transcript: ENST00000520897
  gene symbol: LYRM2
  hgvsc: ENST00000520897.1:n.562+15669G>C
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429782
  ensembl transcript: ENST00000520793
  gene symbol: ANKRD6
  hgvsc: ENST00000520793.1:c.318+2925C>G
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000518253
  gene symbol: ANKRD6
  hgvsc: ENST00000518253.1:n.181C>G
  variant of: http://identifiers.org/hgnc/17280
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 6.75e1
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 4.75e1
  variant carriers: 156
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 5.75e1
  variant carriers: 107
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 7.75e1
  variant carriers: 28
genotype depth: GenotypeDepth
  all individuals: 9696
  bin: 1.25e1
  variant carriers: 1137
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 3.25e1
  variant carriers: 170
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 3.75e1
  variant carriers: 187
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 8.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 8481
  bin: 2.25e1
  variant carriers: 361
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 4.25e1
  variant carriers: 176
genotype depth: GenotypeDepth
  all individuals: 3147
  bin: 2.5e0
  variant carriers: 89
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 5.25e1
  variant carriers: 132
genotype depth: GenotypeDepth
  all individuals: 5480
  bin: 1.75e1
  variant carriers: 787
genotype depth: GenotypeDepth
  all individuals: 25878
  bin: 7.5e0
  variant carriers: 713
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 9.25e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 7.25e1
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 826
  bin: 9.75e1
  variant carriers: 109
genotype quality: GenotypeQuality
hgvs: p.Gln122Glu
num of homozygotes: 173
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: East Asian
population: South Asian
reference allele: C
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP

6-90315772-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90315772
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 90315772
    reference: chr 6
allele count: 1
allele frequency: 1.637626097209485e-5
allele num: 61064
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430954
  ensembl transcript: ENST00000485637
  gene symbol: ANKRD6
  hgvsc: ENST00000485637.1:c.365A>G
  hgvsp: ENSP00000430954.1:p.Gln122Arg
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430985
  ensembl transcript: ENST00000522441
  gene symbol: ANKRD6
  hgvsc: ENST00000522441.1:c.365A>G
  hgvsp: ENSP00000430985.1:p.Gln122Arg
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000345767
  ensembl transcript: ENST00000339746
  gene symbol: ANKRD6
  hgvsc: ENST00000339746.4:c.365A>G
  hgvsp: ENSP00000345767.4:p.Gln122Arg
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl transcript: ENST00000520897
  gene symbol: LYRM2
  hgvsc: ENST00000520897.1:n.562+15668T>C
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000518253
  gene symbol: ANKRD6
  hgvsc: ENST00000518253.1:n.182A>G
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl protein: ENSP00000430316
  ensembl transcript: ENST00000412237
  gene symbol: LYRM2
  hgvsc: ENST00000412237.2:c.*118-2944T>C
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000396771
  ensembl transcript: ENST00000447838
  gene symbol: ANKRD6
  hgvsc: ENST00000447838.2:c.365A>G
  hgvsp: ENSP00000396771.2:p.Gln122Arg
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429782
  ensembl transcript: ENST00000520793
  gene symbol: ANKRD6
  hgvsc: ENST00000520793.1:c.318+2926A>G
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429235
  ensembl transcript: ENST00000518150
  gene symbol: ANKRD6
  hgvsc: ENST00000518150.1:c.121-17357A>G
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000358416
  ensembl transcript: ENST00000369408
  gene symbol: ANKRD6
  hgvsc: ENST00000369408.5:c.365A>G
  hgvsp: ENSP00000358416.5:p.Gln122Arg
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429431
  ensembl transcript: ENST00000465722
  gene symbol: ANKRD6
  hgvsc: ENST00000465722.2:c.365A>G
  hgvsp: ENSP00000429431.1:p.Gln122Arg
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000520886
  gene symbol: ANKRD6
  hgvsc: ENST00000520886.2:n.417A>G
  variant of: http://identifiers.org/hgnc/17280
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 930
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8155
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26244
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5377
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3354
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9792
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2448
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gln122Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: Other
reference allele: A
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: DP

6-90315774-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90315774
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 90315774
    reference: chr 6
allele count: 1
allele frequency: 1.636446946389998e-5
allele num: 61108
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl protein: ENSP00000430316
  ensembl transcript: ENST00000412237
  gene symbol: LYRM2
  hgvsc: ENST00000412237.2:c.*118-2946A>G
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000358416
  ensembl transcript: ENST00000369408
  gene symbol: ANKRD6
  hgvsc: ENST00000369408.5:c.367T>C
  hgvsp: ENSP00000358416.5:p.Ser123Pro
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000345767
  ensembl transcript: ENST00000339746
  gene symbol: ANKRD6
  hgvsc: ENST00000339746.4:c.367T>C
  hgvsp: ENSP00000345767.4:p.Ser123Pro
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429235
  ensembl transcript: ENST00000518150
  gene symbol: ANKRD6
  hgvsc: ENST00000518150.1:c.121-17355T>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000396771
  ensembl transcript: ENST00000447838
  gene symbol: ANKRD6
  hgvsc: ENST00000447838.2:c.367T>C
  hgvsp: ENSP00000396771.2:p.Ser123Pro
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430954
  ensembl transcript: ENST00000485637
  gene symbol: ANKRD6
  hgvsc: ENST00000485637.1:c.367T>C
  hgvsp: ENSP00000430954.1:p.Ser123Pro
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000518253
  gene symbol: ANKRD6
  hgvsc: ENST00000518253.1:n.184T>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430985
  ensembl transcript: ENST00000522441
  gene symbol: ANKRD6
  hgvsc: ENST00000522441.1:c.367T>C
  hgvsp: ENSP00000430985.1:p.Ser123Pro
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000520886
  gene symbol: ANKRD6
  hgvsc: ENST00000520886.2:n.419T>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl transcript: ENST00000520897
  gene symbol: LYRM2
  hgvsc: ENST00000520897.1:n.562+15666A>G
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429782
  ensembl transcript: ENST00000520793
  gene symbol: ANKRD6
  hgvsc: ENST00000520793.1:c.318+2928T>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429431
  ensembl transcript: ENST00000465722
  gene symbol: ANKRD6
  hgvsc: ENST00000465722.2:c.367T>C
  hgvsp: ENSP00000429431.1:p.Ser123Pro
  variant of: http://identifiers.org/hgnc/17280
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2393
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3355
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 406
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26186
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7916
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5686
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9825
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ser123Pro
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: Other
reference allele: T
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff

6-90315776-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90315776
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 90315776
    reference: chr 6
allele count: 161
allele frequency: 2.618482256123345e-3
allele num: 61486
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429431
  ensembl transcript: ENST00000465722
  gene symbol: ANKRD6
  hgvsc: ENST00000465722.2:c.369A>G
  hgvsp: ENST00000465722.2:c.369A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430985
  ensembl transcript: ENST00000522441
  gene symbol: ANKRD6
  hgvsc: ENST00000522441.1:c.369A>G
  hgvsp: ENST00000522441.1:c.369A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430954
  ensembl transcript: ENST00000485637
  gene symbol: ANKRD6
  hgvsc: ENST00000485637.1:c.369A>G
  hgvsp: ENST00000485637.1:c.369A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000358416
  ensembl transcript: ENST00000369408
  gene symbol: ANKRD6
  hgvsc: ENST00000369408.5:c.369A>G
  hgvsp: ENST00000369408.5:c.369A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000518253
  gene symbol: ANKRD6
  hgvsc: ENST00000518253.1:n.186A>G
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl transcript: ENST00000520897
  gene symbol: LYRM2
  hgvsc: ENST00000520897.1:n.562+15664T>C
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl protein: ENSP00000430316
  ensembl transcript: ENST00000412237
  gene symbol: LYRM2
  hgvsc: ENST00000412237.2:c.*118-2948T>C
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000396771
  ensembl transcript: ENST00000447838
  gene symbol: ANKRD6
  hgvsc: ENST00000447838.2:c.369A>G
  hgvsp: ENST00000447838.2:c.369A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000345767
  ensembl transcript: ENST00000339746
  gene symbol: ANKRD6
  hgvsc: ENST00000339746.4:c.369A>G
  hgvsp: ENST00000339746.4:c.369A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429235
  ensembl transcript: ENST00000518150
  gene symbol: ANKRD6
  hgvsc: ENST00000518150.1:c.121-17353A>G
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429782
  ensembl transcript: ENST00000520793
  gene symbol: ANKRD6
  hgvsc: ENST00000520793.1:c.318+2930A>G
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000520886
  gene symbol: ANKRD6
  hgvsc: ENST00000520886.2:n.421A>G
  variant of: http://identifiers.org/hgnc/17280
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 927
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9900
  bin: 1.25e1
  variant carriers: 50
genotype depth: GenotypeDepth
  all individuals: 5815
  bin: 1.75e1
  variant carriers: 38
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26078
  bin: 7.5e0
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 7848
  bin: 2.25e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 5.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3341
  bin: 2.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2370
  bin: 2.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 795
  bin: 9.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 6.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
hgvs: p.Ser123Ser
num of homozygotes: 2
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
population: East Asian
reference allele: A
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: VQSLOD

http://identifiers.org/exac.variant/6-90315780-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90315780
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 90315780
    reference: chr 6
allele count: 1
allele frequency: 1.619695497246518e-5
allele num: 61740
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429431
  ensembl transcript: ENST00000465722
  gene symbol: ANKRD6
  hgvsc: ENST00000465722.2:c.373A>C
  hgvsp: ENSP00000429431.1:p.Lys125Gln
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl protein: ENSP00000430316
  ensembl transcript: ENST00000412237
  gene symbol: LYRM2
  hgvsc: ENST00000412237.2:c.*118-2952T>G
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430985
  ensembl transcript: ENST00000522441
  gene symbol: ANKRD6
  hgvsc: ENST00000522441.1:c.373A>C
  hgvsp: ENSP00000430985.1:p.Lys125Gln
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000396771
  ensembl transcript: ENST00000447838
  gene symbol: ANKRD6
  hgvsc: ENST00000447838.2:c.373A>C
  hgvsp: ENSP00000396771.2:p.Lys125Gln
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl transcript: ENST00000520897
  gene symbol: LYRM2
  hgvsc: ENST00000520897.1:n.562+15660T>G
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000358416
  ensembl transcript: ENST00000369408
  gene symbol: ANKRD6
  hgvsc: ENST00000369408.5:c.373A>C
  hgvsp: ENSP00000358416.5:p.Lys125Gln
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000345767
  ensembl transcript: ENST00000339746
  gene symbol: ANKRD6
  hgvsc: ENST00000339746.4:c.373A>C
  hgvsp: ENSP00000345767.4:p.Lys125Gln
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000518253
  gene symbol: ANKRD6
  hgvsc: ENST00000518253.1:n.190A>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430954
  ensembl transcript: ENST00000485637
  gene symbol: ANKRD6
  hgvsc: ENST00000485637.1:c.373A>C
  hgvsp: ENSP00000430954.1:p.Lys125Gln
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429782
  ensembl transcript: ENST00000520793
  gene symbol: ANKRD6
  hgvsc: ENST00000520793.1:c.318+2934A>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000520886
  gene symbol: ANKRD6
  hgvsc: ENST00000520886.2:n.425A>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429235
  ensembl transcript: ENST00000518150
  gene symbol: ANKRD6
  hgvsc: ENST00000518150.1:c.121-17349A>C
  variant of: http://identifiers.org/hgnc/17280
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10022
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25911
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3316
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 407
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7749
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2322
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5991
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Lys125Gln
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
reference allele: A
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: DP

6-90315781-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90315781
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 90315781
    reference: chr 6
allele count: 6
allele frequency: 9.72100709633518e-5
allele num: 61722
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000358416
  ensembl transcript: ENST00000369408
  gene symbol: ANKRD6
  hgvsc: ENST00000369408.5:c.374A>G
  hgvsp: ENSP00000358416.5:p.Lys125Arg
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000520886
  gene symbol: ANKRD6
  hgvsc: ENST00000520886.2:n.426A>G
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000518253
  gene symbol: ANKRD6
  hgvsc: ENST00000518253.1:n.191A>G
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429235
  ensembl transcript: ENST00000518150
  gene symbol: ANKRD6
  hgvsc: ENST00000518150.1:c.121-17348A>G
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429431
  ensembl transcript: ENST00000465722
  gene symbol: ANKRD6
  hgvsc: ENST00000465722.2:c.374A>G
  hgvsp: ENSP00000429431.1:p.Lys125Arg
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430954
  ensembl transcript: ENST00000485637
  gene symbol: ANKRD6
  hgvsc: ENST00000485637.1:c.374A>G
  hgvsp: ENSP00000430954.1:p.Lys125Arg
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl protein: ENSP00000430316
  ensembl transcript: ENST00000412237
  gene symbol: LYRM2
  hgvsc: ENST00000412237.2:c.*118-2953T>C
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000396771
  ensembl transcript: ENST00000447838
  gene symbol: ANKRD6
  hgvsc: ENST00000447838.2:c.374A>G
  hgvsp: ENSP00000396771.2:p.Lys125Arg
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430985
  ensembl transcript: ENST00000522441
  gene symbol: ANKRD6
  hgvsc: ENST00000522441.1:c.374A>G
  hgvsp: ENSP00000430985.1:p.Lys125Arg
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000345767
  ensembl transcript: ENST00000339746
  gene symbol: ANKRD6
  hgvsc: ENST00000339746.4:c.374A>G
  hgvsp: ENSP00000345767.4:p.Lys125Arg
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl transcript: ENST00000520897
  gene symbol: LYRM2
  hgvsc: ENST00000520897.1:n.562+15659T>C
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429782
  ensembl transcript: ENST00000520793
  gene symbol: ANKRD6
  hgvsc: ENST00000520793.1:c.318+2935A>G
  variant of: http://identifiers.org/hgnc/17280
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7779
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3301
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 937
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5997
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2309
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 793
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25926
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 293
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9996
  bin: 1.25e1
  variant carriers: 4
genotype quality: GenotypeQuality
hgvs: p.Lys125Arg
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: Other
reference allele: A
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD

6-90315785-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90315785
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 90315785
    reference: chr 6
allele count: 1
allele frequency: 1.637465203864418e-5
allele num: 61070
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430985
  ensembl transcript: ENST00000522441
  gene symbol: ANKRD6
  hgvsc: ENST00000522441.1:c.378G>A
  hgvsp: ENST00000522441.1:c.378G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429431
  ensembl transcript: ENST00000465722
  gene symbol: ANKRD6
  hgvsc: ENST00000465722.2:c.378G>A
  hgvsp: ENST00000465722.2:c.378G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl protein: ENSP00000430316
  ensembl transcript: ENST00000412237
  gene symbol: LYRM2
  hgvsc: ENST00000412237.2:c.*118-2957C>T
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430954
  ensembl transcript: ENST00000485637
  gene symbol: ANKRD6
  hgvsc: ENST00000485637.1:c.378G>A
  hgvsp: ENST00000485637.1:c.378G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000520886
  gene symbol: ANKRD6
  hgvsc: ENST00000520886.2:n.430G>A
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429782
  ensembl transcript: ENST00000520793
  gene symbol: ANKRD6
  hgvsc: ENST00000520793.1:c.318+2939G>A
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000345767
  ensembl transcript: ENST00000339746
  gene symbol: ANKRD6
  hgvsc: ENST00000339746.4:c.378G>A
  hgvsp: ENST00000339746.4:c.378G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000358416
  ensembl transcript: ENST00000369408
  gene symbol: ANKRD6
  hgvsc: ENST00000369408.5:c.378G>A
  hgvsp: ENST00000369408.5:c.378G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429235
  ensembl transcript: ENST00000518150
  gene symbol: ANKRD6
  hgvsc: ENST00000518150.1:c.121-17344G>A
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl transcript: ENST00000520897
  gene symbol: LYRM2
  hgvsc: ENST00000520897.1:n.562+15655C>T
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000396771
  ensembl transcript: ENST00000447838
  gene symbol: ANKRD6
  hgvsc: ENST00000447838.2:c.378G>A
  hgvsp: ENST00000447838.2:c.378G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000518253
  gene symbol: ANKRD6
  hgvsc: ENST00000518253.1:n.195G>A
  variant of: http://identifiers.org/hgnc/17280
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6034
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 941
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2332
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25616
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 398
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10227
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3296
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu126Leu
num of homozygotes: 0
population: East Asian
population: South Asian
population: Other
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP

6-90315789-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90315789
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 90315789
    reference: chr 6
allele count: 70281
allele frequency: 8.356439646152383e-1
allele num: 84104
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000396771
  ensembl transcript: ENST00000447838
  gene symbol: ANKRD6
  hgvsc: ENST00000447838.2:c.382A>G
  hgvsp: ENSP00000396771.2:p.Ile128Val
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429782
  ensembl transcript: ENST00000520793
  gene symbol: ANKRD6
  hgvsc: ENST00000520793.1:c.318+2943A>G
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429235
  ensembl transcript: ENST00000518150
  gene symbol: ANKRD6
  hgvsc: ENST00000518150.1:c.121-17340A>G
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000518253
  gene symbol: ANKRD6
  hgvsc: ENST00000518253.1:n.199A>G
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429431
  ensembl transcript: ENST00000465722
  gene symbol: ANKRD6
  hgvsc: ENST00000465722.2:c.382A>G
  hgvsp: ENSP00000429431.1:p.Ile128Val
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl transcript: ENST00000520897
  gene symbol: LYRM2
  hgvsc: ENST00000520897.1:n.562+15651T>C
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000345767
  ensembl transcript: ENST00000339746
  gene symbol: ANKRD6
  hgvsc: ENST00000339746.4:c.382A>G
  hgvsp: ENSP00000345767.4:p.Ile128Val
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl protein: ENSP00000430316
  ensembl transcript: ENST00000412237
  gene symbol: LYRM2
  hgvsc: ENST00000412237.2:c.*118-2961T>C
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430985
  ensembl transcript: ENST00000522441
  gene symbol: ANKRD6
  hgvsc: ENST00000522441.1:c.382A>G
  hgvsp: ENSP00000430985.1:p.Ile128Val
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000358416
  ensembl transcript: ENST00000369408
  gene symbol: ANKRD6
  hgvsc: ENST00000369408.5:c.382A>G
  hgvsp: ENSP00000358416.5:p.Ile128Val
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000520886
  gene symbol: ANKRD6
  hgvsc: ENST00000520886.2:n.434A>G
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430954
  ensembl transcript: ENST00000485637
  gene symbol: ANKRD6
  hgvsc: ENST00000485637.1:c.382A>G
  hgvsp: ENSP00000430954.1:p.Ile128Val
  variant of: http://identifiers.org/hgnc/17280
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 6.25e1
  variant carriers: 508
genotype depth: GenotypeDepth
  all individuals: 1013
  bin: 4.75e1
  variant carriers: 998
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 5.75e1
  variant carriers: 625
genotype depth: GenotypeDepth
  all individuals: 3895
  bin: 2.25e1
  variant carriers: 3647
genotype depth: GenotypeDepth
  all individuals: 2176
  bin: 2.5e0
  variant carriers: 1483
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 8.75e1
  variant carriers: 226
genotype depth: GenotypeDepth
  all individuals: 14682
  bin: 7.5e0
  variant carriers: 12849
genotype depth: GenotypeDepth
  all individuals: 1142
  bin: 4.25e1
  variant carriers: 1122
genotype depth: GenotypeDepth
  all individuals: 879
  bin: 5.25e1
  variant carriers: 857
genotype depth: GenotypeDepth
  all individuals: 9881
  bin: 1.75e1
  variant carriers: 9811
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 7.25e1
  variant carriers: 294
genotype depth: GenotypeDepth
  all individuals: 1300
  bin: 3.25e1
  variant carriers: 1227
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 7.75e1
  variant carriers: 267
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 8.25e1
  variant carriers: 226
genotype depth: GenotypeDepth
  all individuals: 1224
  bin: 9.75e1
  variant carriers: 1224
genotype depth: GenotypeDepth
  all individuals: 1900
  bin: 2.75e1
  variant carriers: 1644
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 9.25e1
  variant carriers: 194
genotype quality: GenotypeQuality
hgvs: p.Ile128Val
num of homozygotes: 29191
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
population: East Asian
reference allele: A
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum

6-90315789-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90315789
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 90315789
    reference: chr 6
allele count: 0
allele frequency: 0.0e0
allele num: 84104
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000345767
  ensembl transcript: ENST00000339746
  gene symbol: ANKRD6
  hgvsc: ENST00000339746.4:c.382A>T
  hgvsp: ENSP00000345767.4:p.Ile128Phe
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl transcript: ENST00000520897
  gene symbol: LYRM2
  hgvsc: ENST00000520897.1:n.562+15651T>A
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429431
  ensembl transcript: ENST00000465722
  gene symbol: ANKRD6
  hgvsc: ENST00000465722.2:c.382A>T
  hgvsp: ENSP00000429431.1:p.Ile128Phe
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429782
  ensembl transcript: ENST00000520793
  gene symbol: ANKRD6
  hgvsc: ENST00000520793.1:c.318+2943A>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430954
  ensembl transcript: ENST00000485637
  gene symbol: ANKRD6
  hgvsc: ENST00000485637.1:c.382A>T
  hgvsp: ENSP00000430954.1:p.Ile128Phe
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000396771
  ensembl transcript: ENST00000447838
  gene symbol: ANKRD6
  hgvsc: ENST00000447838.2:c.382A>T
  hgvsp: ENSP00000396771.2:p.Ile128Phe
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl protein: ENSP00000430316
  ensembl transcript: ENST00000412237
  gene symbol: LYRM2
  hgvsc: ENST00000412237.2:c.*118-2961T>A
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429235
  ensembl transcript: ENST00000518150
  gene symbol: ANKRD6
  hgvsc: ENST00000518150.1:c.121-17340A>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000518253
  gene symbol: ANKRD6
  hgvsc: ENST00000518253.1:n.199A>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000520886
  gene symbol: ANKRD6
  hgvsc: ENST00000520886.2:n.434A>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000358416
  ensembl transcript: ENST00000369408
  gene symbol: ANKRD6
  hgvsc: ENST00000369408.5:c.382A>T
  hgvsp: ENSP00000358416.5:p.Ile128Phe
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430985
  ensembl transcript: ENST00000522441
  gene symbol: ANKRD6
  hgvsc: ENST00000522441.1:c.382A>T
  hgvsp: ENSP00000430985.1:p.Ile128Phe
  variant of: http://identifiers.org/hgnc/17280
canonical: true
consequence: missense
filter: AC_Adj0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9881
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2176
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1142
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14682
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1013
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1900
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 879
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17780
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1197
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1300
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ile128Phe
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum

http://identifiers.org/exac.variant/6-90315793-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90315793
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 90315793
    reference: chr 6
allele count: 1
allele frequency: 2.012153406575717e-5
allele num: 49698
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429431
  ensembl transcript: ENST00000465722
  gene symbol: ANKRD6
  hgvsc: ENST00000465722.2:c.386A>C
  hgvsp: ENSP00000429431.1:p.Lys129Thr
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000358416
  ensembl transcript: ENST00000369408
  gene symbol: ANKRD6
  hgvsc: ENST00000369408.5:c.386A>C
  hgvsp: ENSP00000358416.5:p.Lys129Thr
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429782
  ensembl transcript: ENST00000520793
  gene symbol: ANKRD6
  hgvsc: ENST00000520793.1:c.318+2947A>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000520886
  gene symbol: ANKRD6
  hgvsc: ENST00000520886.2:n.438A>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430954
  ensembl transcript: ENST00000485637
  gene symbol: ANKRD6
  hgvsc: ENST00000485637.1:c.386A>C
  hgvsp: ENSP00000430954.1:p.Lys129Thr
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000518253
  gene symbol: ANKRD6
  hgvsc: ENST00000518253.1:n.203A>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430985
  ensembl transcript: ENST00000522441
  gene symbol: ANKRD6
  hgvsc: ENST00000522441.1:c.386A>C
  hgvsp: ENSP00000430985.1:p.Lys129Thr
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000396771
  ensembl transcript: ENST00000447838
  gene symbol: ANKRD6
  hgvsc: ENST00000447838.2:c.386A>C
  hgvsp: ENSP00000396771.2:p.Lys129Thr
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl transcript: ENST00000520897
  gene symbol: LYRM2
  hgvsc: ENST00000520897.1:n.562+15647T>G
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000345767
  ensembl transcript: ENST00000339746
  gene symbol: ANKRD6
  hgvsc: ENST00000339746.4:c.386A>C
  hgvsp: ENSP00000345767.4:p.Lys129Thr
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl protein: ENSP00000430316
  ensembl transcript: ENST00000412237
  gene symbol: LYRM2
  hgvsc: ENST00000412237.2:c.*118-2965T>G
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429235
  ensembl transcript: ENST00000518150
  gene symbol: ANKRD6
  hgvsc: ENST00000518150.1:c.121-17336A>C
  variant of: http://identifiers.org/hgnc/17280
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1195
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3201
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11716
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8762
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1793
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4975
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26406
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Lys129Thr
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

6-90315795-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90315795
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 90315795
    reference: chr 6
allele count: 2
allele frequency: 4.125242357988532e-5
allele num: 48482
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429782
  ensembl transcript: ENST00000520793
  gene symbol: ANKRD6
  hgvsc: ENST00000520793.1:c.318+2949G>A
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430954
  ensembl transcript: ENST00000485637
  gene symbol: ANKRD6
  hgvsc: ENST00000485637.1:c.388G>A
  hgvsp: ENSP00000430954.1:p.Ala130Thr
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl transcript: ENST00000520897
  gene symbol: LYRM2
  hgvsc: ENST00000520897.1:n.562+15645C>T
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429235
  ensembl transcript: ENST00000518150
  gene symbol: ANKRD6
  hgvsc: ENST00000518150.1:c.121-17334G>A
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000358416
  ensembl transcript: ENST00000369408
  gene symbol: ANKRD6
  hgvsc: ENST00000369408.5:c.388G>A
  hgvsp: ENSP00000358416.5:p.Ala130Thr
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430985
  ensembl transcript: ENST00000522441
  gene symbol: ANKRD6
  hgvsc: ENST00000522441.1:c.388G>A
  hgvsp: ENSP00000430985.1:p.Ala130Thr
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl protein: ENSP00000430316
  ensembl transcript: ENST00000412237
  gene symbol: LYRM2
  hgvsc: ENST00000412237.2:c.*118-2967C>T
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000396771
  ensembl transcript: ENST00000447838
  gene symbol: ANKRD6
  hgvsc: ENST00000447838.2:c.388G>A
  hgvsp: ENSP00000396771.2:p.Ala130Thr
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000345767
  ensembl transcript: ENST00000339746
  gene symbol: ANKRD6
  hgvsc: ENST00000339746.4:c.388G>A
  hgvsp: ENSP00000345767.4:p.Ala130Thr
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000520886
  gene symbol: ANKRD6
  hgvsc: ENST00000520886.2:n.440G>A
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429431
  ensembl transcript: ENST00000465722
  gene symbol: ANKRD6
  hgvsc: ENST00000465722.2:c.388G>A
  hgvsp: ENSP00000429431.1:p.Ala130Thr
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000518253
  gene symbol: ANKRD6
  hgvsc: ENST00000518253.1:n.205G>A
  variant of: http://identifiers.org/hgnc/17280
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1167
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4888
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 562
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11449
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26394
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 414
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3097
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9259
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala130Thr
num of homozygotes: 0
population: Latino
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD

6-90315797-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90315797
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 90315797
    reference: chr 6
allele count: 0
allele frequency: 0.0e0
allele num: 47048
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430985
  ensembl transcript: ENST00000522441
  gene symbol: ANKRD6
  hgvsc: ENST00000522441.1:c.390A>G
  hgvsp: ENST00000522441.1:c.390A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430954
  ensembl transcript: ENST00000485637
  gene symbol: ANKRD6
  hgvsc: ENST00000485637.1:c.390A>G
  hgvsp: ENST00000485637.1:c.390A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000396771
  ensembl transcript: ENST00000447838
  gene symbol: ANKRD6
  hgvsc: ENST00000447838.2:c.390A>G
  hgvsp: ENST00000447838.2:c.390A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429782
  ensembl transcript: ENST00000520793
  gene symbol: ANKRD6
  hgvsc: ENST00000520793.1:c.318+2951A>G
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000358416
  ensembl transcript: ENST00000369408
  gene symbol: ANKRD6
  hgvsc: ENST00000369408.5:c.390A>G
  hgvsp: ENST00000369408.5:c.390A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000345767
  ensembl transcript: ENST00000339746
  gene symbol: ANKRD6
  hgvsc: ENST00000339746.4:c.390A>G
  hgvsp: ENST00000339746.4:c.390A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000520886
  gene symbol: ANKRD6
  hgvsc: ENST00000520886.2:n.442A>G
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl transcript: ENST00000520897
  gene symbol: LYRM2
  hgvsc: ENST00000520897.1:n.562+15643T>C
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000518253
  gene symbol: ANKRD6
  hgvsc: ENST00000518253.1:n.207A>G
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429431
  ensembl transcript: ENST00000465722
  gene symbol: ANKRD6
  hgvsc: ENST00000465722.2:c.390A>G
  hgvsp: ENST00000465722.2:c.390A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl protein: ENSP00000430316
  ensembl transcript: ENST00000412237
  gene symbol: LYRM2
  hgvsc: ENST00000412237.2:c.*118-2969T>C
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429235
  ensembl transcript: ENST00000518150
  gene symbol: ANKRD6
  hgvsc: ENST00000518150.1:c.121-17332A>G
  variant of: http://identifiers.org/hgnc/17280
canonical: true
consequence: synonymous
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 1067
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10042
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4767
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1755
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2975
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26395
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11014
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala130Ala
num of homozygotes: 0
population: East Asian
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD

6-90315806-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90315806
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 90315806
    reference: chr 6
allele count: 1
allele frequency: 2.37394359510018e-5
allele num: 42124
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430954
  ensembl transcript: ENST00000485637
  gene symbol: ANKRD6
  hgvsc: ENST00000485637.1:c.399C>T
  hgvsp: ENST00000485637.1:c.399C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000345767
  ensembl transcript: ENST00000339746
  gene symbol: ANKRD6
  hgvsc: ENST00000339746.4:c.399C>T
  hgvsp: ENST00000339746.4:c.399C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429431
  ensembl transcript: ENST00000465722
  gene symbol: ANKRD6
  hgvsc: ENST00000465722.2:c.399C>T
  hgvsp: ENST00000465722.2:c.399C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000396771
  ensembl transcript: ENST00000447838
  gene symbol: ANKRD6
  hgvsc: ENST00000447838.2:c.399C>T
  hgvsp: ENST00000447838.2:c.399C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000518253
  gene symbol: ANKRD6
  hgvsc: ENST00000518253.1:n.216C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000520886
  gene symbol: ANKRD6
  hgvsc: ENST00000520886.2:n.451C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429782
  ensembl transcript: ENST00000520793
  gene symbol: ANKRD6
  hgvsc: ENST00000520793.1:c.318+2960C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430985
  ensembl transcript: ENST00000522441
  gene symbol: ANKRD6
  hgvsc: ENST00000522441.1:c.399C>T
  hgvsp: ENST00000522441.1:c.399C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000358416
  ensembl transcript: ENST00000369408
  gene symbol: ANKRD6
  hgvsc: ENST00000369408.5:c.399C>T
  hgvsp: ENST00000369408.5:c.399C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl protein: ENSP00000430316
  ensembl transcript: ENST00000412237
  gene symbol: LYRM2
  hgvsc: ENST00000412237.2:c.*118-2978G>A
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429235
  ensembl transcript: ENST00000518150
  gene symbol: ANKRD6
  hgvsc: ENST00000518150.1:c.121-17323C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl transcript: ENST00000520897
  gene symbol: LYRM2
  hgvsc: ENST00000520897.1:n.562+15634G>A
  variant of: http://identifiers.org/hgnc/25229
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12885
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4368
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 415
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9682
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25859
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2668
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1681
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 802
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asn133Asn
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: ReadPosRankSum

6-90315807-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90315807
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 90315807
    reference: chr 6
allele count: 1
allele frequency: 2.404192912439294e-5
allele num: 41594
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429235
  ensembl transcript: ENST00000518150
  gene symbol: ANKRD6
  hgvsc: ENST00000518150.1:c.121-17322G>A
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430985
  ensembl transcript: ENST00000522441
  gene symbol: ANKRD6
  hgvsc: ENST00000522441.1:c.400G>A
  hgvsp: ENSP00000430985.1:p.Val134Met
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000520886
  gene symbol: ANKRD6
  hgvsc: ENST00000520886.2:n.452G>A
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000396771
  ensembl transcript: ENST00000447838
  gene symbol: ANKRD6
  hgvsc: ENST00000447838.2:c.400G>A
  hgvsp: ENSP00000396771.2:p.Val134Met
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000358416
  ensembl transcript: ENST00000369408
  gene symbol: ANKRD6
  hgvsc: ENST00000369408.5:c.400G>A
  hgvsp: ENSP00000358416.5:p.Val134Met
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430954
  ensembl transcript: ENST00000485637
  gene symbol: ANKRD6
  hgvsc: ENST00000485637.1:c.400G>A
  hgvsp: ENSP00000430954.1:p.Val134Met
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl protein: ENSP00000430316
  ensembl transcript: ENST00000412237
  gene symbol: LYRM2
  hgvsc: ENST00000412237.2:c.*118-2979C>T
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000518253
  gene symbol: ANKRD6
  hgvsc: ENST00000518253.1:n.217G>A
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000345767
  ensembl transcript: ENST00000339746
  gene symbol: ANKRD6
  hgvsc: ENST00000339746.4:c.400G>A
  hgvsp: ENSP00000345767.4:p.Val134Met
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429431
  ensembl transcript: ENST00000465722
  gene symbol: ANKRD6
  hgvsc: ENST00000465722.2:c.400G>A
  hgvsp: ENSP00000429431.1:p.Val134Met
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl transcript: ENST00000520897
  gene symbol: LYRM2
  hgvsc: ENST00000520897.1:n.562+15633C>T
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429782
  ensembl transcript: ENST00000520793
  gene symbol: ANKRD6
  hgvsc: ENST00000520793.1:c.318+2961G>A
  variant of: http://identifiers.org/hgnc/17280
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 318
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9495
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 413
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1653
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 767
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13238
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4328
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25810
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val134Met
num of homozygotes: 0
population: East Asian
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum

6-90315808-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90315808
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 90315808
    reference: chr 6
allele count: 2
allele frequency: 4.830451164138731e-5
allele num: 41404
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl transcript: ENST00000520897
  gene symbol: LYRM2
  hgvsc: ENST00000520897.1:n.562+15632A>T
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000345767
  ensembl transcript: ENST00000339746
  gene symbol: ANKRD6
  hgvsc: ENST00000339746.4:c.401T>A
  hgvsp: ENSP00000345767.4:p.Val134Glu
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000396771
  ensembl transcript: ENST00000447838
  gene symbol: ANKRD6
  hgvsc: ENST00000447838.2:c.401T>A
  hgvsp: ENSP00000396771.2:p.Val134Glu
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl protein: ENSP00000430316
  ensembl transcript: ENST00000412237
  gene symbol: LYRM2
  hgvsc: ENST00000412237.2:c.*118-2980A>T
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000358416
  ensembl transcript: ENST00000369408
  gene symbol: ANKRD6
  hgvsc: ENST00000369408.5:c.401T>A
  hgvsp: ENSP00000358416.5:p.Val134Glu
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430985
  ensembl transcript: ENST00000522441
  gene symbol: ANKRD6
  hgvsc: ENST00000522441.1:c.401T>A
  hgvsp: ENSP00000430985.1:p.Val134Glu
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430954
  ensembl transcript: ENST00000485637
  gene symbol: ANKRD6
  hgvsc: ENST00000485637.1:c.401T>A
  hgvsp: ENSP00000430954.1:p.Val134Glu
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000518253
  gene symbol: ANKRD6
  hgvsc: ENST00000518253.1:n.218T>A
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429431
  ensembl transcript: ENST00000465722
  gene symbol: ANKRD6
  hgvsc: ENST00000465722.2:c.401T>A
  hgvsp: ENSP00000429431.1:p.Val134Glu
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000520886
  gene symbol: ANKRD6
  hgvsc: ENST00000520886.2:n.453T>A
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429782
  ensembl transcript: ENST00000520793
  gene symbol: ANKRD6
  hgvsc: ENST00000520793.1:c.318+2962T>A
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429235
  ensembl transcript: ENST00000518150
  gene symbol: ANKRD6
  hgvsc: ENST00000518150.1:c.121-17321T>A
  variant of: http://identifiers.org/hgnc/17280
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9423
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13514
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25732
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 716
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4292
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2618
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1644
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Val134Glu
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
reference allele: T
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: DP

6-90315810-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90315810
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 90315810
    reference: chr 6
allele count: 6
allele frequency: 1.483239394838327e-4
allele num: 40452
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000358416
  ensembl transcript: ENST00000369408
  gene symbol: ANKRD6
  hgvsc: ENST00000369408.5:c.403C>G
  hgvsp: ENSP00000358416.5:p.Leu135Val
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000518253
  gene symbol: ANKRD6
  hgvsc: ENST00000518253.1:n.220C>G
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000520886
  gene symbol: ANKRD6
  hgvsc: ENST00000520886.2:n.455C>G
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl transcript: ENST00000520897
  gene symbol: LYRM2
  hgvsc: ENST00000520897.1:n.562+15630G>C
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000396771
  ensembl transcript: ENST00000447838
  gene symbol: ANKRD6
  hgvsc: ENST00000447838.2:c.403C>G
  hgvsp: ENSP00000396771.2:p.Leu135Val
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429431
  ensembl transcript: ENST00000465722
  gene symbol: ANKRD6
  hgvsc: ENST00000465722.2:c.403C>G
  hgvsp: ENSP00000429431.1:p.Leu135Val
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000345767
  ensembl transcript: ENST00000339746
  gene symbol: ANKRD6
  hgvsc: ENST00000339746.4:c.403C>G
  hgvsp: ENSP00000345767.4:p.Leu135Val
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl protein: ENSP00000430316
  ensembl transcript: ENST00000412237
  gene symbol: LYRM2
  hgvsc: ENST00000412237.2:c.*118-2982G>C
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430954
  ensembl transcript: ENST00000485637
  gene symbol: ANKRD6
  hgvsc: ENST00000485637.1:c.403C>G
  hgvsp: ENSP00000430954.1:p.Leu135Val
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429235
  ensembl transcript: ENST00000518150
  gene symbol: ANKRD6
  hgvsc: ENST00000518150.1:c.121-17319C>G
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429782
  ensembl transcript: ENST00000520793
  gene symbol: ANKRD6
  hgvsc: ENST00000520793.1:c.318+2964C>G
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430985
  ensembl transcript: ENST00000522441
  gene symbol: ANKRD6
  hgvsc: ENST00000522441.1:c.403C>G
  hgvsp: ENSP00000430985.1:p.Leu135Val
  variant of: http://identifiers.org/hgnc/17280
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2546
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9254
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4211
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14107
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25477
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1623
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
hgvs: p.Leu135Val
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: ClippingRankSum

6-90315821-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90315821
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 90315821
    reference: chr 6
allele count: 1
allele frequency: 2.797202797202797e-5
allele num: 35750
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429235
  ensembl transcript: ENST00000518150
  gene symbol: ANKRD6
  hgvsc: ENST00000518150.1:c.121-17308C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429431
  ensembl transcript: ENST00000465722
  gene symbol: ANKRD6
  hgvsc: ENST00000465722.2:c.414C>T
  hgvsp: ENST00000465722.2:c.414C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000518253
  gene symbol: ANKRD6
  hgvsc: ENST00000518253.1:n.231C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000345767
  ensembl transcript: ENST00000339746
  gene symbol: ANKRD6
  hgvsc: ENST00000339746.4:c.414C>T
  hgvsp: ENST00000339746.4:c.414C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000396771
  ensembl transcript: ENST00000447838
  gene symbol: ANKRD6
  hgvsc: ENST00000447838.2:c.414C>T
  hgvsp: ENST00000447838.2:c.414C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429782
  ensembl transcript: ENST00000520793
  gene symbol: ANKRD6
  hgvsc: ENST00000520793.1:c.318+2975C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000358416
  ensembl transcript: ENST00000369408
  gene symbol: ANKRD6
  hgvsc: ENST00000369408.5:c.414C>T
  hgvsp: ENST00000369408.5:c.414C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430985
  ensembl transcript: ENST00000522441
  gene symbol: ANKRD6
  hgvsc: ENST00000522441.1:c.414C>T
  hgvsp: ENST00000522441.1:c.414C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000520886
  gene symbol: ANKRD6
  hgvsc: ENST00000520886.2:n.466C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430954
  ensembl transcript: ENST00000485637
  gene symbol: ANKRD6
  hgvsc: ENST00000485637.1:c.414C>T
  hgvsp: ENST00000485637.1:c.414C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl protein: ENSP00000430316
  ensembl transcript: ENST00000412237
  gene symbol: LYRM2
  hgvsc: ENST00000412237.2:c.*118-2993G>A
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl transcript: ENST00000520897
  gene symbol: LYRM2
  hgvsc: ENST00000520897.1:n.562+15619G>A
  variant of: http://identifiers.org/hgnc/25229
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1412
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22145
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19440
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3551
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 672
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1937
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8424
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asn138Asn
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: South Asian
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: BaseQRankSum

6-90315829-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90315829
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 90315829
    reference: chr 6
allele count: 1
allele frequency: 3.165358318561661e-5
allele num: 31592
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000358416
  ensembl transcript: ENST00000369408
  gene symbol: ANKRD6
  hgvsc: ENST00000369408.5:c.417+5G>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl transcript: ENST00000520897
  gene symbol: LYRM2
  hgvsc: ENST00000520897.1:n.562+15611C>G
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430954
  ensembl transcript: ENST00000485637
  gene symbol: ANKRD6
  hgvsc: ENST00000485637.1:c.417+5G>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429235
  ensembl transcript: ENST00000518150
  gene symbol: ANKRD6
  hgvsc: ENST00000518150.1:c.121-17300G>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429431
  ensembl transcript: ENST00000465722
  gene symbol: ANKRD6
  hgvsc: ENST00000465722.2:c.417+5G>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000396771
  ensembl transcript: ENST00000447838
  gene symbol: ANKRD6
  hgvsc: ENST00000447838.2:c.417+5G>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429782
  ensembl transcript: ENST00000520793
  gene symbol: ANKRD6
  hgvsc: ENST00000520793.1:c.318+2983G>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430985
  ensembl transcript: ENST00000522441
  gene symbol: ANKRD6
  hgvsc: ENST00000522441.1:c.417+5G>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000345767
  ensembl transcript: ENST00000339746
  gene symbol: ANKRD6
  hgvsc: ENST00000339746.4:c.417+5G>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000520886
  gene symbol: ANKRD6
  hgvsc: ENST00000520886.2:n.469+5G>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000518253
  gene symbol: ANKRD6
  hgvsc: ENST00000518253.1:n.234+5G>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl protein: ENSP00000430316
  ensembl transcript: ENST00000412237
  gene symbol: LYRM2
  hgvsc: ENST00000412237.2:c.*118-3001C>G
  variant of: http://identifiers.org/hgnc/25229
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19624
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7540
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1669
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1101
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 752
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23584
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2865
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.417+5G>C
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: Latino
population: Other
reference allele: G
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: DP

6-90315830-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90315830
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 90315830
    reference: chr 6
allele count: 1
allele frequency: 3.215434083601286e-5
allele num: 31100
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429431
  ensembl transcript: ENST00000465722
  gene symbol: ANKRD6
  hgvsc: ENST00000465722.2:c.417+6G>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl transcript: ENST00000520897
  gene symbol: LYRM2
  hgvsc: ENST00000520897.1:n.562+15610C>G
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000520886
  gene symbol: ANKRD6
  hgvsc: ENST00000520886.2:n.469+6G>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429782
  ensembl transcript: ENST00000520793
  gene symbol: ANKRD6
  hgvsc: ENST00000520793.1:c.318+2984G>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430985
  ensembl transcript: ENST00000522441
  gene symbol: ANKRD6
  hgvsc: ENST00000522441.1:c.417+6G>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl protein: ENSP00000430316
  ensembl transcript: ENST00000412237
  gene symbol: LYRM2
  hgvsc: ENST00000412237.2:c.*118-3002C>G
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430954
  ensembl transcript: ENST00000485637
  gene symbol: ANKRD6
  hgvsc: ENST00000485637.1:c.417+6G>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429235
  ensembl transcript: ENST00000518150
  gene symbol: ANKRD6
  hgvsc: ENST00000518150.1:c.121-17299G>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000345767
  ensembl transcript: ENST00000339746
  gene symbol: ANKRD6
  hgvsc: ENST00000339746.4:c.417+6G>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000518253
  gene symbol: ANKRD6
  hgvsc: ENST00000518253.1:n.234+6G>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000358416
  ensembl transcript: ENST00000369408
  gene symbol: ANKRD6
  hgvsc: ENST00000369408.5:c.417+6G>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000396771
  ensembl transcript: ENST00000447838
  gene symbol: ANKRD6
  hgvsc: ENST00000447838.2:c.417+6G>C
  variant of: http://identifiers.org/hgnc/17280
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 764
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19388
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23968
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7497
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2796
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1077
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.417+6G>C
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: DP

6-90315849-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90315849
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 90315849
    reference: chr 6
allele count: 1
allele frequency: 4.397924179787141e-5
allele num: 22738
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl protein: ENSP00000430316
  ensembl transcript: ENST00000412237
  gene symbol: LYRM2
  hgvsc: ENST00000412237.2:c.*118-3021C>T
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430954
  ensembl transcript: ENST00000485637
  gene symbol: ANKRD6
  hgvsc: ENST00000485637.1:c.417+25G>A
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000358416
  ensembl transcript: ENST00000369408
  gene symbol: ANKRD6
  hgvsc: ENST00000369408.5:c.417+25G>A
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429431
  ensembl transcript: ENST00000465722
  gene symbol: ANKRD6
  hgvsc: ENST00000465722.2:c.417+25G>A
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl transcript: ENST00000520897
  gene symbol: LYRM2
  hgvsc: ENST00000520897.1:n.562+15591C>T
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000396771
  ensembl transcript: ENST00000447838
  gene symbol: ANKRD6
  hgvsc: ENST00000447838.2:c.417+25G>A
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000345767
  ensembl transcript: ENST00000339746
  gene symbol: ANKRD6
  hgvsc: ENST00000339746.4:c.417+25G>A
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429235
  ensembl transcript: ENST00000518150
  gene symbol: ANKRD6
  hgvsc: ENST00000518150.1:c.121-17280G>A
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429782
  ensembl transcript: ENST00000520793
  gene symbol: ANKRD6
  hgvsc: ENST00000520793.1:c.318+3003G>A
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000518253
  gene symbol: ANKRD6
  hgvsc: ENST00000518253.1:n.234+25G>A
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430985
  ensembl transcript: ENST00000522441
  gene symbol: ANKRD6
  hgvsc: ENST00000522441.1:c.417+25G>A
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000520886
  gene symbol: ANKRD6
  hgvsc: ENST00000520886.2:n.469+25G>A
  variant of: http://identifiers.org/hgnc/17280
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5369
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1251
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31401
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14001
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1228
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 604
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 986
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum

6-90315860-AG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90315860
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 90315859
    reference: chr 6
allele count: 1
allele frequency: 4.873294346978557e-5
allele num: 20520
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl transcript: ENST00000520897
  gene symbol: LYRM2
  hgvsc: ENST00000520897.1:n.562+15579delC
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000518253
  gene symbol: ANKRD6
  hgvsc: ENST00000518253.1:n.234+38delG
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000358416
  ensembl transcript: ENST00000369408
  gene symbol: ANKRD6
  hgvsc: ENST00000369408.5:c.417+38delG
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000345767
  ensembl transcript: ENST00000339746
  gene symbol: ANKRD6
  hgvsc: ENST00000339746.4:c.417+38delG
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000396771
  ensembl transcript: ENST00000447838
  gene symbol: ANKRD6
  hgvsc: ENST00000447838.2:c.417+38delG
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429431
  ensembl transcript: ENST00000465722
  gene symbol: ANKRD6
  hgvsc: ENST00000465722.2:c.417+38delG
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430985
  ensembl transcript: ENST00000522441
  gene symbol: ANKRD6
  hgvsc: ENST00000522441.1:c.417+38delG
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429235
  ensembl transcript: ENST00000518150
  gene symbol: ANKRD6
  hgvsc: ENST00000518150.1:c.121-17267delG
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000520886
  gene symbol: ANKRD6
  hgvsc: ENST00000520886.2:n.469+38delG
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl protein: ENSP00000430316
  ensembl transcript: ENST00000412237
  gene symbol: LYRM2
  hgvsc: ENST00000412237.2:c.*118-3033delC
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429782
  ensembl transcript: ENST00000520793
  gene symbol: ANKRD6
  hgvsc: ENST00000520793.1:c.318+3016delG
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430954
  ensembl transcript: ENST00000485637
  gene symbol: ANKRD6
  hgvsc: ENST00000485637.1:c.417+38delG
  variant of: http://identifiers.org/hgnc/17280
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32207
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12681
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4713
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 46
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1723
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 562
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: AG
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: QD

6-90321943-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90321943
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 90321943
    reference: chr 6
allele count: 0
allele frequency: 0.0e0
allele num: 18866
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430954
  ensembl transcript: ENST00000485637
  gene symbol: ANKRD6
  hgvsc: ENST00000485637.1:c.418-48C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl transcript: ENST00000520897
  gene symbol: LYRM2
  hgvsc: ENST00000520897.1:n.562+9497G>A
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000396771
  ensembl transcript: ENST00000447838
  gene symbol: ANKRD6
  hgvsc: ENST00000447838.2:c.418-48C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429431
  ensembl transcript: ENST00000465722
  gene symbol: ANKRD6
  hgvsc: ENST00000465722.2:c.418-48C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430985
  ensembl transcript: ENST00000522441
  gene symbol: ANKRD6
  hgvsc: ENST00000522441.1:c.418-48C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429235
  ensembl transcript: ENST00000518150
  gene symbol: ANKRD6
  hgvsc: ENST00000518150.1:c.121-11186C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl protein: ENSP00000430316
  ensembl transcript: ENST00000412237
  gene symbol: LYRM2
  hgvsc: ENST00000412237.2:c.*118-9115G>A
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000520886
  gene symbol: ANKRD6
  hgvsc: ENST00000520886.2:n.470-48C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000518253
  gene symbol: ANKRD6
  hgvsc: ENST00000518253.1:n.235-48C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000358416
  ensembl transcript: ENST00000369408
  gene symbol: ANKRD6
  hgvsc: ENST00000369408.5:c.418-48C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429782
  ensembl transcript: ENST00000520793
  gene symbol: ANKRD6
  hgvsc: ENST00000520793.1:c.319-48C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000345767
  ensembl transcript: ENST00000339746
  gene symbol: ANKRD6
  hgvsc: ENST00000339746.4:c.418-48C>T
  variant of: http://identifiers.org/hgnc/17280
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35155
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1639
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6547
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2008
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1779
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2504
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD

http://identifiers.org/exac.variant/6-90321950-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90321950
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 90321950
    reference: chr 6
allele count: 11
allele frequency: 5.751934741685839e-4
allele num: 19124
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl transcript: ENST00000520897
  gene symbol: LYRM2
  hgvsc: ENST00000520897.1:n.562+9490T>G
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000520886
  gene symbol: ANKRD6
  hgvsc: ENST00000520886.2:n.470-41A>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429235
  ensembl transcript: ENST00000518150
  gene symbol: ANKRD6
  hgvsc: ENST00000518150.1:c.121-11179A>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430985
  ensembl transcript: ENST00000522441
  gene symbol: ANKRD6
  hgvsc: ENST00000522441.1:c.418-41A>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000358416
  ensembl transcript: ENST00000369408
  gene symbol: ANKRD6
  hgvsc: ENST00000369408.5:c.418-41A>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430954
  ensembl transcript: ENST00000485637
  gene symbol: ANKRD6
  hgvsc: ENST00000485637.1:c.418-41A>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000518253
  gene symbol: ANKRD6
  hgvsc: ENST00000518253.1:n.235-41A>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl protein: ENSP00000430316
  ensembl transcript: ENST00000412237
  gene symbol: LYRM2
  hgvsc: ENST00000412237.2:c.*118-9122T>G
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000396771
  ensembl transcript: ENST00000447838
  gene symbol: ANKRD6
  hgvsc: ENST00000447838.2:c.418-41A>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429431
  ensembl transcript: ENST00000465722
  gene symbol: ANKRD6
  hgvsc: ENST00000465722.2:c.418-41A>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429782
  ensembl transcript: ENST00000520793
  gene symbol: ANKRD6
  hgvsc: ENST00000520793.1:c.319-41A>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000345767
  ensembl transcript: ENST00000339746
  gene symbol: ANKRD6
  hgvsc: ENST00000339746.4:c.418-41A>C
  variant of: http://identifiers.org/hgnc/17280
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1589
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3081
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2132
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35063
  bin: 2.5e0
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6823
  bin: 7.5e0
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: South Asian
reference allele: A
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum

6-90321955-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90321955
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 90321955
    reference: chr 6
allele count: 5420
allele frequency: 2.716791979949875e-1
allele num: 19950
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000396771
  ensembl transcript: ENST00000447838
  gene symbol: ANKRD6
  hgvsc: ENST00000447838.2:c.418-36G>A
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429782
  ensembl transcript: ENST00000520793
  gene symbol: ANKRD6
  hgvsc: ENST00000520793.1:c.319-36G>A
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl protein: ENSP00000430316
  ensembl transcript: ENST00000412237
  gene symbol: LYRM2
  hgvsc: ENST00000412237.2:c.*118-9127C>T
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000518253
  gene symbol: ANKRD6
  hgvsc: ENST00000518253.1:n.235-36G>A
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000358416
  ensembl transcript: ENST00000369408
  gene symbol: ANKRD6
  hgvsc: ENST00000369408.5:c.418-36G>A
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000345767
  ensembl transcript: ENST00000339746
  gene symbol: ANKRD6
  hgvsc: ENST00000339746.4:c.418-36G>A
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000520886
  gene symbol: ANKRD6
  hgvsc: ENST00000520886.2:n.470-36G>A
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430954
  ensembl transcript: ENST00000485637
  gene symbol: ANKRD6
  hgvsc: ENST00000485637.1:c.418-36G>A
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429235
  ensembl transcript: ENST00000518150
  gene symbol: ANKRD6
  hgvsc: ENST00000518150.1:c.121-11174G>A
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl transcript: ENST00000520897
  gene symbol: LYRM2
  hgvsc: ENST00000520897.1:n.562+9485C>T
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429431
  ensembl transcript: ENST00000465722
  gene symbol: ANKRD6
  hgvsc: ENST00000465722.2:c.418-36G>A
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430985
  ensembl transcript: ENST00000522441
  gene symbol: ANKRD6
  hgvsc: ENST00000522441.1:c.418-36G>A
  variant of: http://identifiers.org/hgnc/17280
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1635
  bin: 1.25e1
  variant carriers: 847
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 7.25e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.75e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 2766
  bin: 2.25e1
  variant carriers: 731
genotype depth: GenotypeDepth
  all individuals: 28268
  bin: 2.5e0
  variant carriers: 3525
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 3.75e1
  variant carriers: 366
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 8.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 6.25e1
  variant carriers: 50
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 9.75e1
  variant carriers: 119
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 5.25e1
  variant carriers: 70
genotype depth: GenotypeDepth
  all individuals: 9719
  bin: 7.5e0
  variant carriers: 4542
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 5.75e1
  variant carriers: 65
genotype depth: GenotypeDepth
  all individuals: 1060
  bin: 1.75e1
  variant carriers: 644
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 4.25e1
  variant carriers: 186
genotype depth: GenotypeDepth
  all individuals: 1060
  bin: 3.25e1
  variant carriers: 569
genotype depth: GenotypeDepth
  all individuals: 2281
  bin: 2.75e1
  variant carriers: 748
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 6.75e1
  variant carriers: 38
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 8.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.25e1
  variant carriers: 10
genotype quality: GenotypeQuality
num of homozygotes: 790
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum

6-90321960-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90321960
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 90321960
    reference: chr 6
allele count: 4
allele frequency: 2.038320423970648e-4
allele num: 19624
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl protein: ENSP00000430316
  ensembl transcript: ENST00000412237
  gene symbol: LYRM2
  hgvsc: ENST00000412237.2:c.*118-9132A>G
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429235
  ensembl transcript: ENST00000518150
  gene symbol: ANKRD6
  hgvsc: ENST00000518150.1:c.121-11169T>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430954
  ensembl transcript: ENST00000485637
  gene symbol: ANKRD6
  hgvsc: ENST00000485637.1:c.418-31T>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000396771
  ensembl transcript: ENST00000447838
  gene symbol: ANKRD6
  hgvsc: ENST00000447838.2:c.418-31T>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000520886
  gene symbol: ANKRD6
  hgvsc: ENST00000520886.2:n.470-31T>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000345767
  ensembl transcript: ENST00000339746
  gene symbol: ANKRD6
  hgvsc: ENST00000339746.4:c.418-31T>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429782
  ensembl transcript: ENST00000520793
  gene symbol: ANKRD6
  hgvsc: ENST00000520793.1:c.319-31T>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl transcript: ENST00000520897
  gene symbol: LYRM2
  hgvsc: ENST00000520897.1:n.562+9480A>G
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430985
  ensembl transcript: ENST00000522441
  gene symbol: ANKRD6
  hgvsc: ENST00000522441.1:c.418-31T>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000358416
  ensembl transcript: ENST00000369408
  gene symbol: ANKRD6
  hgvsc: ENST00000369408.5:c.418-31T>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000518253
  gene symbol: ANKRD6
  hgvsc: ENST00000518253.1:n.235-31T>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429431
  ensembl transcript: ENST00000465722
  gene symbol: ANKRD6
  hgvsc: ENST00000465722.2:c.418-31T>C
  variant of: http://identifiers.org/hgnc/17280
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 744
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 988
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9215
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1504
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33847
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3169
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3051
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: South Asian
reference allele: T
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: QD

6-90321962-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90321962
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 90321962
    reference: chr 6
allele count: 1
allele frequency: 5.08854060655404e-5
allele num: 19652
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000345767
  ensembl transcript: ENST00000339746
  gene symbol: ANKRD6
  hgvsc: ENST00000339746.4:c.418-29T>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430954
  ensembl transcript: ENST00000485637
  gene symbol: ANKRD6
  hgvsc: ENST00000485637.1:c.418-29T>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429235
  ensembl transcript: ENST00000518150
  gene symbol: ANKRD6
  hgvsc: ENST00000518150.1:c.121-11167T>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429431
  ensembl transcript: ENST00000465722
  gene symbol: ANKRD6
  hgvsc: ENST00000465722.2:c.418-29T>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000520886
  gene symbol: ANKRD6
  hgvsc: ENST00000520886.2:n.470-29T>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429782
  ensembl transcript: ENST00000520793
  gene symbol: ANKRD6
  hgvsc: ENST00000520793.1:c.319-29T>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430985
  ensembl transcript: ENST00000522441
  gene symbol: ANKRD6
  hgvsc: ENST00000522441.1:c.418-29T>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000518253
  gene symbol: ANKRD6
  hgvsc: ENST00000518253.1:n.235-29T>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000396771
  ensembl transcript: ENST00000447838
  gene symbol: ANKRD6
  hgvsc: ENST00000447838.2:c.418-29T>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000358416
  ensembl transcript: ENST00000369408
  gene symbol: ANKRD6
  hgvsc: ENST00000369408.5:c.418-29T>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl transcript: ENST00000520897
  gene symbol: LYRM2
  hgvsc: ENST00000520897.1:n.562+9478A>G
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl protein: ENSP00000430316
  ensembl transcript: ENST00000412237
  gene symbol: LYRM2
  hgvsc: ENST00000412237.2:c.*118-9134A>G
  variant of: http://identifiers.org/hgnc/25229
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3254
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9392
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3083
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34051
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1468
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: African
population: European (Non-Finnish)
reference allele: T
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD

6-90321963-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90321963
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 90321963
    reference: chr 6
allele count: 1
allele frequency: 5.092686901609289e-5
allele num: 19636
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000520886
  gene symbol: ANKRD6
  hgvsc: ENST00000520886.2:n.470-28G>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429431
  ensembl transcript: ENST00000465722
  gene symbol: ANKRD6
  hgvsc: ENST00000465722.2:c.418-28G>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl transcript: ENST00000520897
  gene symbol: LYRM2
  hgvsc: ENST00000520897.1:n.562+9477C>A
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000345767
  ensembl transcript: ENST00000339746
  gene symbol: ANKRD6
  hgvsc: ENST00000339746.4:c.418-28G>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000396771
  ensembl transcript: ENST00000447838
  gene symbol: ANKRD6
  hgvsc: ENST00000447838.2:c.418-28G>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430985
  ensembl transcript: ENST00000522441
  gene symbol: ANKRD6
  hgvsc: ENST00000522441.1:c.418-28G>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429235
  ensembl transcript: ENST00000518150
  gene symbol: ANKRD6
  hgvsc: ENST00000518150.1:c.121-11166G>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429782
  ensembl transcript: ENST00000520793
  gene symbol: ANKRD6
  hgvsc: ENST00000520793.1:c.319-28G>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl protein: ENSP00000430316
  ensembl transcript: ENST00000412237
  gene symbol: LYRM2
  hgvsc: ENST00000412237.2:c.*118-9135C>A
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430954
  ensembl transcript: ENST00000485637
  gene symbol: ANKRD6
  hgvsc: ENST00000485637.1:c.418-28G>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000518253
  gene symbol: ANKRD6
  hgvsc: ENST00000518253.1:n.235-28G>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000358416
  ensembl transcript: ENST00000369408
  gene symbol: ANKRD6
  hgvsc: ENST00000369408.5:c.418-28G>T
  variant of: http://identifiers.org/hgnc/17280
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 648
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1460
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34126
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3285
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9524
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD

6-90321969-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90321969
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 90321969
    reference: chr 6
allele count: 0
allele frequency: 0.0e0
allele num: 19692
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000396771
  ensembl transcript: ENST00000447838
  gene symbol: ANKRD6
  hgvsc: ENST00000447838.2:c.418-22C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000520886
  gene symbol: ANKRD6
  hgvsc: ENST00000520886.2:n.470-22C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429782
  ensembl transcript: ENST00000520793
  gene symbol: ANKRD6
  hgvsc: ENST00000520793.1:c.319-22C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429235
  ensembl transcript: ENST00000518150
  gene symbol: ANKRD6
  hgvsc: ENST00000518150.1:c.121-11160C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430985
  ensembl transcript: ENST00000522441
  gene symbol: ANKRD6
  hgvsc: ENST00000522441.1:c.418-22C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430954
  ensembl transcript: ENST00000485637
  gene symbol: ANKRD6
  hgvsc: ENST00000485637.1:c.418-22C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000345767
  ensembl transcript: ENST00000339746
  gene symbol: ANKRD6
  hgvsc: ENST00000339746.4:c.418-22C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429431
  ensembl transcript: ENST00000465722
  gene symbol: ANKRD6
  hgvsc: ENST00000465722.2:c.418-22C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl protein: ENSP00000430316
  ensembl transcript: ENST00000412237
  gene symbol: LYRM2
  hgvsc: ENST00000412237.2:c.*118-9141G>A
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl transcript: ENST00000520897
  gene symbol: LYRM2
  hgvsc: ENST00000520897.1:n.562+9471G>A
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000518253
  gene symbol: ANKRD6
  hgvsc: ENST00000518253.1:n.235-22C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000358416
  ensembl transcript: ENST00000369408
  gene symbol: ANKRD6
  hgvsc: ENST00000369408.5:c.418-22C>T
  variant of: http://identifiers.org/hgnc/17280
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3266
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10570
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1479
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3230
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34230
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 518
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1052
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: C
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum

6-90321970-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90321970
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 90321970
    reference: chr 6
allele count: 1
allele frequency: 5.062265870203503e-5
allele num: 19754
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000345767
  ensembl transcript: ENST00000339746
  gene symbol: ANKRD6
  hgvsc: ENST00000339746.4:c.418-21C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430985
  ensembl transcript: ENST00000522441
  gene symbol: ANKRD6
  hgvsc: ENST00000522441.1:c.418-21C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000518253
  gene symbol: ANKRD6
  hgvsc: ENST00000518253.1:n.235-21C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl protein: ENSP00000430316
  ensembl transcript: ENST00000412237
  gene symbol: LYRM2
  hgvsc: ENST00000412237.2:c.*118-9142G>A
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000520886
  gene symbol: ANKRD6
  hgvsc: ENST00000520886.2:n.470-21C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429782
  ensembl transcript: ENST00000520793
  gene symbol: ANKRD6
  hgvsc: ENST00000520793.1:c.319-21C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl transcript: ENST00000520897
  gene symbol: LYRM2
  hgvsc: ENST00000520897.1:n.562+9470G>A
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429431
  ensembl transcript: ENST00000465722
  gene symbol: ANKRD6
  hgvsc: ENST00000465722.2:c.418-21C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429235
  ensembl transcript: ENST00000518150
  gene symbol: ANKRD6
  hgvsc: ENST00000518150.1:c.121-11159C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000358416
  ensembl transcript: ENST00000369408
  gene symbol: ANKRD6
  hgvsc: ENST00000369408.5:c.418-21C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000396771
  ensembl transcript: ENST00000447838
  gene symbol: ANKRD6
  hgvsc: ENST00000447838.2:c.418-21C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430954
  ensembl transcript: ENST00000485637
  gene symbol: ANKRD6
  hgvsc: ENST00000485637.1:c.418-21C>T
  variant of: http://identifiers.org/hgnc/17280
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10739
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1058
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1483
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3234
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34241
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3293
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: Other
reference allele: C
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP

6-90321992-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90321992
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 90321992
    reference: chr 6
allele count: 0
allele frequency: 0.0e0
allele num: 20326
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000518253
  gene symbol: ANKRD6
  hgvsc: ENST00000518253.1:n.236C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000396771
  ensembl transcript: ENST00000447838
  gene symbol: ANKRD6
  hgvsc: ENST00000447838.2:c.419C>T
  hgvsp: ENSP00000396771.2:p.Ala140Val
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429431
  ensembl transcript: ENST00000465722
  gene symbol: ANKRD6
  hgvsc: ENST00000465722.2:c.419C>T
  hgvsp: ENSP00000429431.1:p.Ala140Val
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000345767
  ensembl transcript: ENST00000339746
  gene symbol: ANKRD6
  hgvsc: ENST00000339746.4:c.419C>T
  hgvsp: ENSP00000345767.4:p.Ala140Val
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000520886
  gene symbol: ANKRD6
  hgvsc: ENST00000520886.2:n.471C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000358416
  ensembl transcript: ENST00000369408
  gene symbol: ANKRD6
  hgvsc: ENST00000369408.5:c.419C>T
  hgvsp: ENSP00000358416.5:p.Ala140Val
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430954
  ensembl transcript: ENST00000485637
  gene symbol: ANKRD6
  hgvsc: ENST00000485637.1:c.419C>T
  hgvsp: ENSP00000430954.1:p.Ala140Val
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl protein: ENSP00000430316
  ensembl transcript: ENST00000412237
  gene symbol: LYRM2
  hgvsc: ENST00000412237.2:c.*118-9164G>A
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429235
  ensembl transcript: ENST00000518150
  gene symbol: ANKRD6
  hgvsc: ENST00000518150.1:c.121-11137C>T
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429782
  ensembl transcript: ENST00000520793
  gene symbol: ANKRD6
  hgvsc: ENST00000520793.1:c.320C>T
  hgvsp: ENSP00000429782.1:p.Ala107Val
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl transcript: ENST00000520897
  gene symbol: LYRM2
  hgvsc: ENST00000520897.1:n.562+9448G>A
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430985
  ensembl transcript: ENST00000522441
  gene symbol: ANKRD6
  hgvsc: ENST00000522441.1:c.419C>T
  hgvsp: ENSP00000430985.1:p.Ala140Val
  variant of: http://identifiers.org/hgnc/17280
canonical: true
consequence: missense
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1048
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17643
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1570
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3464
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3453
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala140Val
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ

6-90321993-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90321993
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 90321993
    reference: chr 6
allele count: 0
allele frequency: 0.0e0
allele num: 20412
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000345767
  ensembl transcript: ENST00000339746
  gene symbol: ANKRD6
  hgvsc: ENST00000339746.4:c.420G>A
  hgvsp: ENST00000339746.4:c.420G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000520886
  gene symbol: ANKRD6
  hgvsc: ENST00000520886.2:n.472G>A
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000396771
  ensembl transcript: ENST00000447838
  gene symbol: ANKRD6
  hgvsc: ENST00000447838.2:c.420G>A
  hgvsp: ENST00000447838.2:c.420G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl protein: ENSP00000430316
  ensembl transcript: ENST00000412237
  gene symbol: LYRM2
  hgvsc: ENST00000412237.2:c.*118-9165C>T
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000518253
  gene symbol: ANKRD6
  hgvsc: ENST00000518253.1:n.237G>A
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000358416
  ensembl transcript: ENST00000369408
  gene symbol: ANKRD6
  hgvsc: ENST00000369408.5:c.420G>A
  hgvsp: ENST00000369408.5:c.420G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429782
  ensembl transcript: ENST00000520793
  gene symbol: ANKRD6
  hgvsc: ENST00000520793.1:c.321G>A
  hgvsp: ENST00000520793.1:c.321G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl transcript: ENST00000520897
  gene symbol: LYRM2
  hgvsc: ENST00000520897.1:n.562+9447C>T
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429431
  ensembl transcript: ENST00000465722
  gene symbol: ANKRD6
  hgvsc: ENST00000465722.2:c.420G>A
  hgvsp: ENST00000465722.2:c.420G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430954
  ensembl transcript: ENST00000485637
  gene symbol: ANKRD6
  hgvsc: ENST00000485637.1:c.420G>A
  hgvsp: ENST00000485637.1:c.420G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430985
  ensembl transcript: ENST00000522441
  gene symbol: ANKRD6
  hgvsc: ENST00000522441.1:c.420G>A
  hgvsp: ENST00000522441.1:c.420G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429235
  ensembl transcript: ENST00000518150
  gene symbol: ANKRD6
  hgvsc: ENST00000518150.1:c.121-11136G>A
  variant of: http://identifiers.org/hgnc/17280
canonical: true
consequence: splice region
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18170
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3466
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3484
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29460
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1596
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1045
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: c.420G>A
num of homozygotes: 0
population: Latino
population: Other
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: DP
site quality: MQ
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff

6-90321996-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90321996
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 90321996
    reference: chr 6
allele count: 1
allele frequency: 4.865706500583885e-5
allele num: 20552
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl transcript: ENST00000520897
  gene symbol: LYRM2
  hgvsc: ENST00000520897.1:n.562+9444C>T
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000518253
  gene symbol: ANKRD6
  hgvsc: ENST00000518253.1:n.240G>A
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000520886
  gene symbol: ANKRD6
  hgvsc: ENST00000520886.2:n.475G>A
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429431
  ensembl transcript: ENST00000465722
  gene symbol: ANKRD6
  hgvsc: ENST00000465722.2:c.423G>A
  hgvsp: ENST00000465722.2:c.423G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000396771
  ensembl transcript: ENST00000447838
  gene symbol: ANKRD6
  hgvsc: ENST00000447838.2:c.423G>A
  hgvsp: ENST00000447838.2:c.423G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429235
  ensembl transcript: ENST00000518150
  gene symbol: ANKRD6
  hgvsc: ENST00000518150.1:c.121-11133G>A
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000358416
  ensembl transcript: ENST00000369408
  gene symbol: ANKRD6
  hgvsc: ENST00000369408.5:c.423G>A
  hgvsp: ENST00000369408.5:c.423G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429782
  ensembl transcript: ENST00000520793
  gene symbol: ANKRD6
  hgvsc: ENST00000520793.1:c.324G>A
  hgvsp: ENST00000520793.1:c.324G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000345767
  ensembl transcript: ENST00000339746
  gene symbol: ANKRD6
  hgvsc: ENST00000339746.4:c.423G>A
  hgvsp: ENST00000339746.4:c.423G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430985
  ensembl transcript: ENST00000522441
  gene symbol: ANKRD6
  hgvsc: ENST00000522441.1:c.423G>A
  hgvsp: ENST00000522441.1:c.423G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430954
  ensembl transcript: ENST00000485637
  gene symbol: ANKRD6
  hgvsc: ENST00000485637.1:c.423G>A
  hgvsp: ENST00000485637.1:c.423G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl protein: ENSP00000430316
  ensembl transcript: ENST00000412237
  gene symbol: LYRM2
  hgvsc: ENST00000412237.2:c.*118-9168C>T
  variant of: http://identifiers.org/hgnc/25229
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28753
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18934
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1039
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1651
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3483
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3491
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Gly141Gly
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum

6-90322006-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90322006
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 90322006
    reference: chr 6
allele count: 1
allele frequency: 4.8118564142046e-5
allele num: 20782
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430954
  ensembl transcript: ENST00000485637
  gene symbol: ANKRD6
  hgvsc: ENST00000485637.1:c.433C>G
  hgvsp: ENSP00000430954.1:p.Leu145Val
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl transcript: ENST00000520897
  gene symbol: LYRM2
  hgvsc: ENST00000520897.1:n.562+9434G>C
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000518253
  gene symbol: ANKRD6
  hgvsc: ENST00000518253.1:n.250C>G
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429235
  ensembl transcript: ENST00000518150
  gene symbol: ANKRD6
  hgvsc: ENST00000518150.1:c.121-11123C>G
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000520886
  gene symbol: ANKRD6
  hgvsc: ENST00000520886.2:n.485C>G
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429431
  ensembl transcript: ENST00000465722
  gene symbol: ANKRD6
  hgvsc: ENST00000465722.2:c.433C>G
  hgvsp: ENSP00000429431.1:p.Leu145Val
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000345767
  ensembl transcript: ENST00000339746
  gene symbol: ANKRD6
  hgvsc: ENST00000339746.4:c.433C>G
  hgvsp: ENSP00000345767.4:p.Leu145Val
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl protein: ENSP00000430316
  ensembl transcript: ENST00000412237
  gene symbol: LYRM2
  hgvsc: ENST00000412237.2:c.*118-9178G>C
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000358416
  ensembl transcript: ENST00000369408
  gene symbol: ANKRD6
  hgvsc: ENST00000369408.5:c.433C>G
  hgvsp: ENSP00000358416.5:p.Leu145Val
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000396771
  ensembl transcript: ENST00000447838
  gene symbol: ANKRD6
  hgvsc: ENST00000447838.2:c.433C>G
  hgvsp: ENSP00000396771.2:p.Leu145Val
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430985
  ensembl transcript: ENST00000522441
  gene symbol: ANKRD6
  hgvsc: ENST00000522441.1:c.433C>G
  hgvsp: ENSP00000430985.1:p.Leu145Val
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429782
  ensembl transcript: ENST00000520793
  gene symbol: ANKRD6
  hgvsc: ENST00000520793.1:c.334C>G
  hgvsp: ENSP00000429782.1:p.Leu112Val
  variant of: http://identifiers.org/hgnc/17280
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1020
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3443
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3318
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 542
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27388
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20456
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu145Val
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum

6-90322012-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90322012
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 90322012
    reference: chr 6
allele count: 1
allele frequency: 4.76598989610142e-5
allele num: 20982
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl transcript: ENST00000520897
  gene symbol: LYRM2
  hgvsc: ENST00000520897.1:n.562+9428G>C
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429782
  ensembl transcript: ENST00000520793
  gene symbol: ANKRD6
  hgvsc: ENST00000520793.1:c.340C>G
  hgvsp: ENSP00000429782.1:p.Leu114Val
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000520886
  gene symbol: ANKRD6
  hgvsc: ENST00000520886.2:n.491C>G
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430954
  ensembl transcript: ENST00000485637
  gene symbol: ANKRD6
  hgvsc: ENST00000485637.1:c.439C>G
  hgvsp: ENSP00000430954.1:p.Leu147Val
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429431
  ensembl transcript: ENST00000465722
  gene symbol: ANKRD6
  hgvsc: ENST00000465722.2:c.439C>G
  hgvsp: ENSP00000429431.1:p.Leu147Val
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl protein: ENSP00000430316
  ensembl transcript: ENST00000412237
  gene symbol: LYRM2
  hgvsc: ENST00000412237.2:c.*118-9184G>C
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000345767
  ensembl transcript: ENST00000339746
  gene symbol: ANKRD6
  hgvsc: ENST00000339746.4:c.439C>G
  hgvsp: ENSP00000345767.4:p.Leu147Val
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000358416
  ensembl transcript: ENST00000369408
  gene symbol: ANKRD6
  hgvsc: ENST00000369408.5:c.439C>G
  hgvsp: ENSP00000358416.5:p.Leu147Val
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429235
  ensembl transcript: ENST00000518150
  gene symbol: ANKRD6
  hgvsc: ENST00000518150.1:c.121-11117C>G
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430985
  ensembl transcript: ENST00000522441
  gene symbol: ANKRD6
  hgvsc: ENST00000522441.1:c.439C>G
  hgvsp: ENSP00000430985.1:p.Leu147Val
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000396771
  ensembl transcript: ENST00000447838
  gene symbol: ANKRD6
  hgvsc: ENST00000447838.2:c.439C>G
  hgvsp: ENSP00000396771.2:p.Leu147Val
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000518253
  gene symbol: ANKRD6
  hgvsc: ENST00000518253.1:n.256C>G
  variant of: http://identifiers.org/hgnc/17280
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26246
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 98
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 621
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 216
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1015
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1890
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21639
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3416
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Leu147Val
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: MQ
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD

6-90322015-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90322015
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 90322015
    reference: chr 6
allele count: 3
allele frequency: 1.430205949656751e-4
allele num: 20976
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429235
  ensembl transcript: ENST00000518150
  gene symbol: ANKRD6
  hgvsc: ENST00000518150.1:c.121-11114G>A
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000518253
  gene symbol: ANKRD6
  hgvsc: ENST00000518253.1:n.259G>A
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000396771
  ensembl transcript: ENST00000447838
  gene symbol: ANKRD6
  hgvsc: ENST00000447838.2:c.442G>A
  hgvsp: ENSP00000396771.2:p.Ala148Thr
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000520886
  gene symbol: ANKRD6
  hgvsc: ENST00000520886.2:n.494G>A
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430954
  ensembl transcript: ENST00000485637
  gene symbol: ANKRD6
  hgvsc: ENST00000485637.1:c.442G>A
  hgvsp: ENSP00000430954.1:p.Ala148Thr
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429782
  ensembl transcript: ENST00000520793
  gene symbol: ANKRD6
  hgvsc: ENST00000520793.1:c.343G>A
  hgvsp: ENSP00000429782.1:p.Ala115Thr
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000345767
  ensembl transcript: ENST00000339746
  gene symbol: ANKRD6
  hgvsc: ENST00000339746.4:c.442G>A
  hgvsp: ENSP00000345767.4:p.Ala148Thr
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000358416
  ensembl transcript: ENST00000369408
  gene symbol: ANKRD6
  hgvsc: ENST00000369408.5:c.442G>A
  hgvsp: ENSP00000358416.5:p.Ala148Thr
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429431
  ensembl transcript: ENST00000465722
  gene symbol: ANKRD6
  hgvsc: ENST00000465722.2:c.442G>A
  hgvsp: ENSP00000429431.1:p.Ala148Thr
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl protein: ENSP00000430316
  ensembl transcript: ENST00000412237
  gene symbol: LYRM2
  hgvsc: ENST00000412237.2:c.*118-9187C>T
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430985
  ensembl transcript: ENST00000522441
  gene symbol: ANKRD6
  hgvsc: ENST00000522441.1:c.442G>A
  hgvsp: ENSP00000430985.1:p.Ala148Thr
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl transcript: ENST00000520897
  gene symbol: LYRM2
  hgvsc: ENST00000520897.1:n.562+9425C>T
  variant of: http://identifiers.org/hgnc/25229
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22144
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25717
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1017
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3392
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1951
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 99
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Ala148Thr
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Other
population: African
population: European (Finnish)
population: Latino
population: East Asian
reference allele: G
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP

http://identifiers.org/exac.variant/6-90322025-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90322025
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 90322025
    reference: chr 6
allele count: 2
allele frequency: 1.023122570083896e-4
allele num: 19548
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl protein: ENSP00000430316
  ensembl transcript: ENST00000412237
  gene symbol: LYRM2
  hgvsc: ENST00000412237.2:c.*118-9197T>G
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430954
  ensembl transcript: ENST00000485637
  gene symbol: ANKRD6
  hgvsc: ENST00000485637.1:c.452A>C
  hgvsp: ENSP00000430954.1:p.Asn151Thr
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl transcript: ENST00000520897
  gene symbol: LYRM2
  hgvsc: ENST00000520897.1:n.562+9415T>G
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429235
  ensembl transcript: ENST00000518150
  gene symbol: ANKRD6
  hgvsc: ENST00000518150.1:c.121-11104A>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000520886
  gene symbol: ANKRD6
  hgvsc: ENST00000520886.2:n.504A>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000345767
  ensembl transcript: ENST00000339746
  gene symbol: ANKRD6
  hgvsc: ENST00000339746.4:c.452A>C
  hgvsp: ENSP00000345767.4:p.Asn151Thr
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000396771
  ensembl transcript: ENST00000447838
  gene symbol: ANKRD6
  hgvsc: ENST00000447838.2:c.452A>C
  hgvsp: ENSP00000396771.2:p.Asn151Thr
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000358416
  ensembl transcript: ENST00000369408
  gene symbol: ANKRD6
  hgvsc: ENST00000369408.5:c.452A>C
  hgvsp: ENSP00000358416.5:p.Asn151Thr
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429782
  ensembl transcript: ENST00000520793
  gene symbol: ANKRD6
  hgvsc: ENST00000520793.1:c.353A>C
  hgvsp: ENSP00000429782.1:p.Asn118Thr
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429431
  ensembl transcript: ENST00000465722
  gene symbol: ANKRD6
  hgvsc: ENST00000465722.2:c.452A>C
  hgvsp: ENSP00000429431.1:p.Asn151Thr
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000518253
  gene symbol: ANKRD6
  hgvsc: ENST00000518253.1:n.269A>C
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430985
  ensembl transcript: ENST00000522441
  gene symbol: ANKRD6
  hgvsc: ENST00000522441.1:c.452A>C
  hgvsp: ENSP00000430985.1:p.Asn151Thr
  variant of: http://identifiers.org/hgnc/17280
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.95to100.00
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2213
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23402
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24130
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1036
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 631
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3436
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3463
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
hgvs: p.Asn151Thr
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: A
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD

6-90322039-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 90322039
    reference: chr 6
  end: Position
    type: ExactPosition
    position: 90322039
    reference: chr 6
allele count: 2
allele frequency: 8.6333419666753e-5
allele num: 23166
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429431
  ensembl transcript: ENST00000465722
  gene symbol: ANKRD6
  hgvsc: ENST00000465722.2:c.466A>G
  hgvsp: ENSP00000429431.1:p.Ser156Gly
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000518253
  gene symbol: ANKRD6
  hgvsc: ENST00000518253.1:n.283A>G
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000396771
  ensembl transcript: ENST00000447838
  gene symbol: ANKRD6
  hgvsc: ENST00000447838.2:c.466A>G
  hgvsp: ENSP00000396771.2:p.Ser156Gly
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000358416
  ensembl transcript: ENST00000369408
  gene symbol: ANKRD6
  hgvsc: ENST00000369408.5:c.466A>G
  hgvsp: ENSP00000358416.5:p.Ser156Gly
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430954
  ensembl transcript: ENST00000485637
  gene symbol: ANKRD6
  hgvsc: ENST00000485637.1:c.466A>G
  hgvsp: ENSP00000430954.1:p.Ser156Gly
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000345767
  ensembl transcript: ENST00000339746
  gene symbol: ANKRD6
  hgvsc: ENST00000339746.4:c.466A>G
  hgvsp: ENSP00000345767.4:p.Ser156Gly
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429782
  ensembl transcript: ENST00000520793
  gene symbol: ANKRD6
  hgvsc: ENST00000520793.1:c.367A>G
  hgvsp: ENSP00000429782.1:p.Ser123Gly
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl transcript: ENST00000520897
  gene symbol: LYRM2
  hgvsc: ENST00000520897.1:n.562+9401T>C
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000135299
  ensembl transcript: ENST00000520886
  gene symbol: ANKRD6
  hgvsc: ENST00000520886.2:n.518A>G
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000430985
  ensembl transcript: ENST00000522441
  gene symbol: ANKRD6
  hgvsc: ENST00000522441.1:c.466A>G
  hgvsp: ENSP00000430985.1:p.Ser156Gly
  variant of: http://identifiers.org/hgnc/17280
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000083099
  ensembl protein: ENSP00000430316
  ensembl transcript: ENST00000412237
  gene symbol: LYRM2
  hgvsc: ENST00000412237.2:c.*118-9211T>C
  variant of: http://identifiers.org/hgnc/25229
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000135299
  ensembl protein: ENSP00000429235
  ensembl transcript: ENST00000518150
  gene symbol: ANKRD6
  hgvsc: ENST00000518150.1:c.121-11090A>G
  variant of: http://identifiers.org/hgnc/17280
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ser156Gly
num of homozygotes: 0
reference allele: A

GenotypeDepth
all individuals: 149
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1168
bin: 3.25e1
variant carriers: 1

GenotypeDepth
all individuals: 197
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 23492
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 3
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 393
bin: 3.75e1
variant carriers: 0

GenotypeDepth
all individuals: 306
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 246
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1507
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1846
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 174
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27536
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 381
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 915
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 967
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 628
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 896
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 492
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 439
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 603
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 291
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1735
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 943
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18681
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 471
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1617
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 1.931247585940518e-4
allele num: 5178
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2310
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10546
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5728
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4988
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 484
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.961794184777215e-5
allele num: 40308
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.271e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.96e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.29e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 5.29e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 5.04e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 3.18e-1

DP
type: SiteQuality
SIO_000300: 9.27356e5

GenotypeDepth
all individuals: 4729
bin: 2.75e1
variant carriers: 0

GenotypeDepth
all individuals: 23492
bin: 7.5e0
variant carriers: 0

GenotypeDepth
all individuals: 306
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 56
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 149
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 943
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18681
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 967
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 381
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1507
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 128
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 896
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1735
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 246
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 174
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 628
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 439
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1617
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 603
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1846
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 492
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 471
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 915
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27536
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 291
bin: 8.25e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 484
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.961794184777215e-5
allele num: 40308
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5178
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10546
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4988
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5728
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 4.329004329004329e-4
allele num: 2310
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 5.04e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.18e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.29e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.96e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.1e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.271e0

MQRankSum
type: SiteQuality
SIO_000300: 5.29e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 9.27356e5

GenotypeDepth
all individuals: 197
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 149
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 115
bin: 5.75e1
variant carriers: 0

GenotypeDepth
all individuals: 1133
bin: 3.25e1
variant carriers: 0

GenotypeDepth
all individuals: 56
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 9
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 19
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 450
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29287
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2145
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 17097
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 476
bin: 5.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 5610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.522958926228681e-5
allele num: 39636
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5008
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 474
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10468
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4832
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 4.416961130742049e-4
allele num: 2264
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 7.18e-1

VQSLOD
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SIO_000300: -1.83e0

DP
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SIO_000300: 8.97661e5

ReadPosRankSum
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SIO_000300: -1.171e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.4e-1

QD
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SIO_000300: 5.86e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.9e-3

FS
type: SiteQuality
SIO_000300: 6.531e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.4e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2144
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 450
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.869857890800299e-4
allele num: 5348
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4492
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4638
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 37950
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 6.18e-1

BaseQRankSum
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SIO_000300: -3.62e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
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VQSLOD
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SIO_000300: -5.018e-1

FS
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SIO_000300: 0.0e0

InbreedingCoeff
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SIO_000300: -8.3e-3

DP
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SIO_000300: 8.50285e5

ClippingRankSum
type: SiteQuality
SIO_000300: 7.06e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.83e-1

GenotypeDepth
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4458
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 4.710315591144607e-4
allele num: 4246
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10148
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 36736
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5196
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2058
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 440
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.53e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.53e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 8.12619e5

FS
type: SiteQuality
SIO_000300: 2.825e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.52e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.599999999999999e-3

QD
type: SiteQuality
SIO_000300: 8.029999999999999e0

VQSLOD
type: SiteQuality
SIO_000300: -1.295e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.16e0

GenotypeDepth
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bin: 8.25e1
variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
all individuals: 10
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variant carriers: 1

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1996
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5138
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10100
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4152
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 5.510856387082553e-5
allele num: 36292
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 434
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4336
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.644e0

QD
type: SiteQuality
SIO_000300: 1.097e1

MQ
type: SiteQuality
SIO_000300: 5.985e1

VQSLOD
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MQRankSum
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BaseQRankSum
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SIO_000300: -1.582e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.04e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -3.9e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.19e-1

DP
type: SiteQuality
SIO_000300: 8.03141e5

GenotypeDepth
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bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 9
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variant carriers: 0

GenotypeDepth
all individuals: 9
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3978
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 420
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4960
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9930
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1918
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
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SIO_000300: -7.2e-1

QD
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InbreedingCoeff
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VQSLOD
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DP
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MQ
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ClippingRankSum
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SIO_000300: 7.39e-1

FS
type: SiteQuality
SIO_000300: 6.022e0

BaseQRankSum
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SIO_000300: 7.2e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.2e-1

GenotypeDepth
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bin: 6.25e1
variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3978
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1918
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 35238
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 420
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.007049345417925e-4
allele num: 9930
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4140
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

FS
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SIO_000300: 6.022e0

DP
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BaseQRankSum
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SIO_000300: 7.2e-1

InbreedingCoeff
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VQSLOD
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ReadPosRankSum
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QD
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MQ
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SIO_000300: 6.0e1

MQRankSum
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SIO_000300: -7.2e-1

ClippingRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 263
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GenotypeQuality
all individuals: 411
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variant carriers: 0

Other
type: Population
allele count: 1
allele frequency: 2.525252525252525e-3
allele num: 396
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.031405359524676e-5
allele num: 32988
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3712
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1724
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3526
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.118e0

QD
type: SiteQuality
SIO_000300: 5.31e0

FS
type: SiteQuality
SIO_000300: 1.273e0

MQRankSum
type: SiteQuality
SIO_000300: 2.13e-1

BaseQRankSum
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SIO_000300: -1.414e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.28e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.43e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.59e-2

DP
type: SiteQuality
SIO_000300: 7.33222e5

GenotypeDepth
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variant carriers: 1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 970
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variant carriers: 2

GenotypeQuality
all individuals: 125
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9634
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 32544
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 396
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3646
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 5.777007510109763e-4
allele num: 3462
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4578
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1698
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 4.75e-1

VQSLOD
type: SiteQuality
SIO_000300: -7.476e-1

ClippingRankSum
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SIO_000300: -3.17e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.58e-1

DP
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SIO_000300: 7.28484e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.58e-1

QD
type: SiteQuality
SIO_000300: 2.664e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.68e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 413
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GenotypeQuality
all individuals: 1123
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variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 3.225806451612903e-4
allele num: 3100
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 364
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1530
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4382
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9416
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3172
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 30726
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.91e-2

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -7.996e-1

QD
type: SiteQuality
SIO_000300: 1.628e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.52e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.33e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 7.02702e5

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.333e0

GenotypeDepth
all individuals: 47
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variant carriers: 33

GenotypeDepth
all individuals: 91
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variant carriers: 84

GenotypeDepth
all individuals: 28
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variant carriers: 26

GenotypeQuality
all individuals: 1778
bin: 2.75e1
variant carriers: 201

GenotypeQuality
all individuals: 2436
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variant carriers: 170

GenotypeQuality
all individuals: 300
bin: 5.25e1
variant carriers: 179

GenotypeQuality
all individuals: 270
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variant carriers: 150

GenotypeQuality
all individuals: 4599
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variant carriers: 253

GenotypeQuality
all individuals: 2163
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variant carriers: 33

GenotypeQuality
all individuals: 1016
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variant carriers: 234

GenotypeQuality
all individuals: 8611
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variant carriers: 7900

GenotypeQuality
all individuals: 21587
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GenotypeQuality
all individuals: 415
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GenotypeQuality
all individuals: 578
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variant carriers: 107

GenotypeQuality
all individuals: 10371
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GenotypeQuality
all individuals: 1417
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variant carriers: 212

GenotypeQuality
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variant carriers: 392

GenotypeQuality
all individuals: 2068
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variant carriers: 123

GenotypeQuality
all individuals: 220
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variant carriers: 82

GenotypeQuality
all individuals: 445
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variant carriers: 359

GenotypeQuality
all individuals: 345
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variant carriers: 204

GenotypeQuality
all individuals: 390
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variant carriers: 152

GenotypeQuality
all individuals: 428
bin: 8.25e1
variant carriers: 247

European (Finnish)
type: Population
allele count: 323
allele frequency: 2.261904761904762e-1
allele num: 1428
num of homozygotes: 16

Other
type: Population
allele count: 65
allele frequency: 1.815642458100559e-1
allele num: 358
num of homozygotes: 3

South Asian
type: Population
allele count: 1372
allele frequency: 1.452466652551344e-1
allele num: 9446
num of homozygotes: 85

European (Non-Finnish)
type: Population
allele count: 6428
allele frequency: 2.156178719978532e-1
allele num: 29812
num of homozygotes: 465

Latino
type: Population
allele count: 293
allele frequency: 1.009648518263267e-1
allele num: 2902
num of homozygotes: 12

African
type: Population
allele count: 159
allele frequency: 3.874269005847953e-2
allele num: 4104
num of homozygotes: 5

East Asian
type: Population
allele count: 4
allele frequency: 1.44196106705119e-3
allele num: 2774
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.7e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 7.19843e5

BaseQRankSum
type: SiteQuality
SIO_000300: -1.38e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.36e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.39e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.03e-1

QD
type: SiteQuality
SIO_000300: 1.594e1

VQSLOD
type: SiteQuality
SIO_000300: 6.71e0

GenotypeDepth
all individuals: 27
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variant carriers: 0

GenotypeDepth
all individuals: 10
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variant carriers: 0

GenotypeDepth
all individuals: 64
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variant carriers: 0

GenotypeQuality
all individuals: 3647
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variant carriers: 0

GenotypeQuality
all individuals: 823
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GenotypeQuality
all individuals: 259
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GenotypeQuality
all individuals: 203
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GenotypeQuality
all individuals: 184
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GenotypeQuality
all individuals: 346
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GenotypeQuality
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GenotypeQuality
all individuals: 3401
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GenotypeQuality
all individuals: 110
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GenotypeQuality
all individuals: 23010
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2041
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GenotypeQuality
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GenotypeQuality
all individuals: 761
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GenotypeQuality
all individuals: 1038
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GenotypeQuality
all individuals: 1708
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GenotypeQuality
all individuals: 159
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GenotypeQuality
all individuals: 4409
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GenotypeQuality
all individuals: 200
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variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.143641354071363e-4
allele num: 8744
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3662
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 22638
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2300
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 840
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2022
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 306
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.27e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.93e-2

QD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 7.27e-1

BaseQRankSum
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FS
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DP
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SIO_000300: 6.19589e5

VQSLOD
type: SiteQuality
SIO_000300: 9.65e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
all individuals: 12
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variant carriers: 0

GenotypeDepth
all individuals: 414
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GenotypeDepth
all individuals: 23
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GenotypeQuality
all individuals: 985
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 110
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GenotypeQuality
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GenotypeQuality
all individuals: 861
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1039
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GenotypeQuality
all individuals: 188
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GenotypeQuality
all individuals: 1663
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 310
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 4.49802087081684e-5
allele num: 22232
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1972
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 846
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2262
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3628
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 6.14534e5

QD
type: SiteQuality
SIO_000300: 2.818e1

VQSLOD
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MQ
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SIO_000300: 6.0e1

MQRankSum
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BaseQRankSum
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ReadPosRankSum
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SIO_000300: -7.31e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.03e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 7.31e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
all individuals: 1044
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3554
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 21674
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 814
num of homozygotes: 0

South Asian
type: Population
allele count: 7
allele frequency: 8.124419684308263e-4
allele num: 8616
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 1872
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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BaseQRankSum
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DP
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MQRankSum
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InbreedingCoeff
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QD
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VQSLOD
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ClippingRankSum
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FS
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SIO_000300: 1.431e0

ReadPosRankSum
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SIO_000300: 1.34e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
all individuals: 27
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variant carriers: 0

GenotypeDepth
all individuals: 325
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1037
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 96
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GenotypeQuality
all individuals: 18553
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GenotypeQuality
all individuals: 1379
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GenotypeQuality
all individuals: 341
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1717
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 109
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 19428
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1530
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 5.605381165919282e-4
allele num: 1784
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 290
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 652
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 3268
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.73e0

MQRankSum
type: SiteQuality
SIO_000300: 3.61e-1

BaseQRankSum
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SIO_000300: -7.31e-1

DP
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SIO_000300: 5.803e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.570000000000001e-1

FS
type: SiteQuality
SIO_000300: 1.42e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.31e-1

QD
type: SiteQuality
SIO_000300: 1.053e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.59e-2

GenotypeDepth
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variant carriers: 6

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 4

GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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bin: 1.25e1
variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 15
allele frequency: 8.666512595331638e-4
allele num: 17308
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1464
num of homozygotes: 0

European (Finnish)
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allele count: 1
allele frequency: 1.908396946564885e-3
allele num: 524
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 252
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1200
num of homozygotes: 0

African
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allele count: 6
allele frequency: 2.06043956043956e-3
allele num: 2912
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8204
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -4.221e0

InbreedingCoeff
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MQRankSum
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ReadPosRankSum
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MQ
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SIO_000300: 5.899e1

BaseQRankSum
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SIO_000300: -2.822e0

FS
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SIO_000300: 2.432e0

DP
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SIO_000300: 5.65818e5

ClippingRankSum
type: SiteQuality
SIO_000300: 2.21e0

QD
type: SiteQuality
SIO_000300: 6.7e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 153
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 252
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1464
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2912
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 524
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1200
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 5.777675063554426e-5
allele num: 17308
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.21e0

ReadPosRankSum
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SIO_000300: -1.415e0

VQSLOD
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SIO_000300: -4.221e0

FS
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SIO_000300: 2.432e0

QD
type: SiteQuality
SIO_000300: 6.7e-1

BaseQRankSum
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DP
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SIO_000300: 5.65818e5

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.35e-2

MQRankSum
type: SiteQuality
SIO_000300: -1.15e-1

MQ
type: SiteQuality
SIO_000300: 5.899e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 257
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8130
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 258
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 592
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2990
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1438
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1146
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 17314
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.42e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.42e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
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SIO_000300: -7.42e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 5.62566e5

QD
type: SiteQuality
SIO_000300: 2.107e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.83e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 7.42e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.506e0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 6

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 308
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GenotypeQuality
all individuals: 1138
bin: 9.75e1
variant carriers: 22

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1088
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8156
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1394
num of homozygotes: 0

African
type: Population
allele count: 16
allele frequency: 5.420054200542005e-3
allele num: 2952
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 568
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 1.172882946281961e-4
allele num: 17052
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 260
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.5e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.5e-1

MQRankSum
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SIO_000300: 3.66e-1

VQSLOD
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SIO_000300: 2.86e0

InbreedingCoeff
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SIO_000300: -3.7e-2

FS
type: SiteQuality
SIO_000300: 7.93e-1

DP
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SIO_000300: 5.60949e5

ClippingRankSum
type: SiteQuality
SIO_000300: 2.5e-2

QD
type: SiteQuality
SIO_000300: 1.537e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8110
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 5.999520038396928e-5
allele num: 16668
num of homozygotes: 0

African
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1054
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -9.227e-1

InbreedingCoeff
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FS
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MQRankSum
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MQ
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DP
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ClippingRankSum
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BaseQRankSum
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QD
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ReadPosRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 16514
num of homozygotes: 0

European (Finnish)
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Other
type: Population
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allele num: 284
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African
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allele frequency: 0.0e0
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South Asian
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allele frequency: 1.503759398496241e-4
allele num: 6650
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
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ReadPosRankSum
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MQ
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VQSLOD
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DP
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BaseQRankSum
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FS
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QD
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ClippingRankSum
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MQRankSum
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 3342
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 294
num of homozygotes: 0

South Asian
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allele count: 1
allele frequency: 1.461560947091494e-4
allele num: 6842
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1962
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 17430
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 7.24834e5

MQRankSum
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SIO_000300: 3.22e-1

InbreedingCoeff
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SIO_000300: -2.24e-2

VQSLOD
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SIO_000300: -1.03e-1

BaseQRankSum
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ReadPosRankSum
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MQ
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SIO_000300: 6.0e1

ClippingRankSum
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SIO_000300: -6.840000000000001e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
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SIO_000300: 1.247e1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 1504
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1960
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 310
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7154
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 1.051303616484441e-4
allele num: 19024
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.24e0

VQSLOD
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SIO_000300: 5.13e-1

BaseQRankSum
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FS
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DP
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MQ
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InbreedingCoeff
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SIO_000300: -1.78e-2

QD
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MQRankSum
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SIO_000300: -6.13e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 6.39e-1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 16

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 10
allele frequency: 4.906289863605142e-4
allele num: 20382
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 326
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South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 6
allele frequency: 3.496503496503497e-3
allele num: 1716
num of homozygotes: 0

European (Finnish)
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allele count: 1
allele frequency: 4.5004500450045e-4
allele num: 2222
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.874e0

InbreedingCoeff
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MQRankSum
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SIO_000300: -1.63e-1

ReadPosRankSum
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DP
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VQSLOD
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SIO_000300: 1.02e0

MQ
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SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.27e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.63e-1

QD
type: SiteQuality
SIO_000300: 1.243e1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 4.253147329023477e-5
allele num: 23512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 376
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2214
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.249687578105474e-4
allele num: 8002
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2424
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 3.19e0

InbreedingCoeff
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SIO_000300: -1.05e-2

DP
type: SiteQuality
SIO_000300: 8.64779e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
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SIO_000300: 1.48e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
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SIO_000300: -2.929e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.35e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.23e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.12e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4164
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 376
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 2462
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 24170
num of homozygotes: 0

East Asian
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Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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MQ
type: SiteQuality
SIO_000300: 5.763e1

MQRankSum
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BaseQRankSum
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QD
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VQSLOD
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InbreedingCoeff
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ReadPosRankSum
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FS
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DP
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SIO_000300: 8.73738e5

ClippingRankSum
type: SiteQuality
SIO_000300: 4.21e-1

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 9104
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4966
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 6.435006435006435e-5
allele num: 31080
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 9.49935e5

VQSLOD
type: SiteQuality
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BaseQRankSum
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ClippingRankSum
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FS
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SIO_000300: 3.005e0

MQRankSum
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InbreedingCoeff
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QD
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ReadPosRankSum
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MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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Other
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South Asian
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 3.118957020772254e-5
allele num: 32062
num of homozygotes: 0

InbreedingCoeff
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QD
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MQRankSum
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FS
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ClippingRankSum
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VQSLOD
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MQ
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BaseQRankSum
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ReadPosRankSum
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DP
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GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
all individuals: 3379
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 582
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4042
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5158
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9262
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3062
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 3.081854043392505e-5
allele num: 32448
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 2.575991756826378e-4
allele num: 3882
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 468
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.24e0

QD
type: SiteQuality
SIO_000300: 9.65e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.18e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.0e0

FS
type: SiteQuality
SIO_000300: 7.269e0

MQ
type: SiteQuality
SIO_000300: 5.356e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.900000000000001e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 2.1e0

MQRankSum
type: SiteQuality
SIO_000300: -2.82e0

DP
type: SiteQuality
SIO_000300: 9.51624e5

GenotypeDepth
all individuals: 2350
bin: 2.75e1
variant carriers: 195

GenotypeDepth
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variant carriers: 28

GenotypeDepth
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variant carriers: 73

GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
variant carriers: 81

GenotypeQuality
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bin: 3.25e1
variant carriers: 44

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 3.75e1
variant carriers: 32

GenotypeQuality
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bin: 1.25e1
variant carriers: 44

GenotypeQuality
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variant carriers: 49

GenotypeQuality
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GenotypeQuality
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variant carriers: 27

GenotypeQuality
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variant carriers: 55

GenotypeQuality
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variant carriers: 69

GenotypeQuality
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variant carriers: 116

GenotypeQuality
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bin: 2.5e0
variant carriers: 8

GenotypeQuality
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variant carriers: 39

GenotypeQuality
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variant carriers: 113

GenotypeQuality
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bin: 2.25e1
variant carriers: 89

GenotypeQuality
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variant carriers: 74

GenotypeQuality
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variant carriers: 86

GenotypeQuality
all individuals: 145
bin: 5.75e1
variant carriers: 61

GenotypeQuality
all individuals: 6541
bin: 9.75e1
variant carriers: 3424

European (Finnish)
type: Population
allele count: 125
allele frequency: 3.896508728179551e-2
allele num: 3208
num of homozygotes: 3

European (Non-Finnish)
type: Population
allele count: 1206
allele frequency: 3.575240128068303e-2
allele num: 33732
num of homozygotes: 23

Latino
type: Population
allele count: 255
allele frequency: 6.028368794326241e-2
allele num: 4230
num of homozygotes: 5

African
type: Population
allele count: 424
allele frequency: 7.768413338219128e-2
allele num: 5458
num of homozygotes: 9

Other
type: Population
allele count: 21
allele frequency: 4.356846473029045e-2
allele num: 482
num of homozygotes: 0

East Asian
type: Population
allele count: 269
allele frequency: 6.270396270396271e-2
allele num: 4290
num of homozygotes: 4

South Asian
type: Population
allele count: 1605
allele frequency: 1.598287193786098e-1
allele num: 10042
num of homozygotes: 129

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.04e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 4.63e0

QD
type: SiteQuality
SIO_000300: 1.356e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.96e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.1e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.74e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -5.97e-1

DP
type: SiteQuality
SIO_000300: 9.91155e5

GenotypeDepth
all individuals: 151
bin: 8.75e1
variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 382
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variant carriers: 0

GenotypeQuality
all individuals: 1109
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.964544053124629e-5
allele num: 33732
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5394
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4220
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9734
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3202
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4294
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 488
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.81e0

VQSLOD
type: SiteQuality
SIO_000300: -3.106e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.200000000000001e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.31e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.025e0

QD
type: SiteQuality
SIO_000300: 1.256e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.95e0

FS
type: SiteQuality
SIO_000300: 1.74e0

DP
type: SiteQuality
SIO_000300: 9.68351e5

GenotypeDepth
all individuals: 173
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 929
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeQuality
all individuals: 1175
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variant carriers: 0

GenotypeQuality
all individuals: 3791
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GenotypeQuality
all individuals: 231
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GenotypeQuality
all individuals: 453
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1086
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variant carriers: 0

GenotypeQuality
all individuals: 2746
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variant carriers: 0

GenotypeQuality
all individuals: 205
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GenotypeQuality
all individuals: 382
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GenotypeQuality
all individuals: 173
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GenotypeQuality
all individuals: 1714
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variant carriers: 0

GenotypeQuality
all individuals: 7554
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variant carriers: 0

GenotypeQuality
all individuals: 435
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GenotypeQuality
all individuals: 595
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GenotypeQuality
all individuals: 1012
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GenotypeQuality
all individuals: 3168
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variant carriers: 0

GenotypeQuality
all individuals: 3889
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variant carriers: 0

GenotypeQuality
all individuals: 178
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3810
bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4302
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4244
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 33728
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3212
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.027960526315789e-4
allele num: 9728
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5396
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 498
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.319e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.17e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.3e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.61e-1

DP
type: SiteQuality
SIO_000300: 9.66565e5

FS
type: SiteQuality
SIO_000300: 2.886e0

QD
type: SiteQuality
SIO_000300: 6.99e0

MQ
type: SiteQuality
SIO_000300: 5.904e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.78e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.9e-3

GenotypeDepth
all individuals: 401
bin: 4.75e1
variant carriers: 5

GenotypeDepth
all individuals: 434
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variant carriers: 4

GenotypeDepth
all individuals: 348
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variant carriers: 1

GenotypeQuality
all individuals: 2178
bin: 1.75e1
variant carriers: 3

GenotypeQuality
all individuals: 595
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variant carriers: 1

GenotypeQuality
all individuals: 413
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2771
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GenotypeQuality
all individuals: 456
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variant carriers: 3

GenotypeQuality
all individuals: 170
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variant carriers: 6

GenotypeQuality
all individuals: 3804
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GenotypeQuality
all individuals: 1750
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variant carriers: 3

GenotypeQuality
all individuals: 1092
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variant carriers: 2

GenotypeQuality
all individuals: 3929
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1237
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 128
bin: 2.5e0
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GenotypeQuality
all individuals: 3204
bin: 2.75e1
variant carriers: 4

GenotypeQuality
all individuals: 180
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variant carriers: 2

GenotypeQuality
all individuals: 1044
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variant carriers: 2

GenotypeQuality
all individuals: 25388
bin: 2.25e1
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GenotypeQuality
all individuals: 7482
bin: 6.25e1
variant carriers: 8

GenotypeQuality
all individuals: 206
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variant carriers: 7

GenotypeQuality
all individuals: 384
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GenotypeQuality
all individuals: 3940
bin: 9.75e1
variant carriers: 153

African
type: Population
allele count: 151
allele frequency: 2.751457725947522e-2
allele num: 5488
num of homozygotes: 2

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3226
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 1.47423045170421e-4
allele num: 33916
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9762
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 9.341429238673517e-4
allele num: 4282
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 2.0e-3
allele num: 500
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4312
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.48e-1

QD
type: SiteQuality
SIO_000300: 1.281e1

MQRankSum
type: SiteQuality
SIO_000300: 2.78e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.44e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.37e-1

DP
type: SiteQuality
SIO_000300: 9.67459e5

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.96e-2

FS
type: SiteQuality
SIO_000300: 5.38e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 3.63e0

GenotypeDepth
all individuals: 399
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variant carriers: 0

GenotypeDepth
all individuals: 170
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2942
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GenotypeQuality
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GenotypeQuality
all individuals: 2921
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GenotypeQuality
all individuals: 2051
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GenotypeQuality
all individuals: 3817
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 3221
bin: 2.75e1
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GenotypeQuality
all individuals: 592
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GenotypeQuality
all individuals: 125
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GenotypeQuality
all individuals: 1595
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GenotypeQuality
all individuals: 162
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GenotypeQuality
all individuals: 1086
bin: 6.75e1
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GenotypeQuality
all individuals: 1194
bin: 4.25e1
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GenotypeQuality
all individuals: 457
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GenotypeQuality
all individuals: 6728
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GenotypeQuality
all individuals: 179
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GenotypeQuality
all individuals: 560
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 2.314814814814815e-4
allele num: 4320
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3264
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4342
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 34056
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5484
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9772
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 502
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.5208e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.98e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.9e-3

MQRankSum
type: SiteQuality
SIO_000300: -5.5e-1

VQSLOD
type: SiteQuality
SIO_000300: -8.847e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.58e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.17e1

DP
type: SiteQuality
SIO_000300: 9.66878e5

GenotypeDepth
all individuals: 407
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 216
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GenotypeDepth
all individuals: 134
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GenotypeQuality
all individuals: 390
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GenotypeQuality
all individuals: 179
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GenotypeQuality
all individuals: 3860
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GenotypeQuality
all individuals: 609
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GenotypeQuality
all individuals: 1648
bin: 4.75e1
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GenotypeQuality
all individuals: 206
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GenotypeQuality
all individuals: 4108
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GenotypeQuality
all individuals: 142
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GenotypeQuality
all individuals: 145
bin: 2.5e0
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GenotypeQuality
all individuals: 595
bin: 7.75e1
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GenotypeQuality
all individuals: 2942
bin: 3.75e1
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GenotypeQuality
all individuals: 2094
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3054
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3235
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GenotypeQuality
all individuals: 6626
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GenotypeQuality
all individuals: 458
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GenotypeQuality
all individuals: 3820
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 1087
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GenotypeQuality
all individuals: 23916
bin: 2.25e1
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GenotypeQuality
all individuals: 1203
bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4342
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.935995302407516e-5
allele num: 34060
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9776
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 5
allele frequency: 1.532801961986511e-3
allele num: 3262
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4310
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5468
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 504
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.43e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.4e-3

QD
type: SiteQuality
SIO_000300: 1.224e1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.33e-1

DP
type: SiteQuality
SIO_000300: 9.67026e5

MQ
type: SiteQuality
SIO_000300: 5.934e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.169999999999999e-1

FS
type: SiteQuality
SIO_000300: 9.782999999999999e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.639999999999999e-1

VQSLOD
type: SiteQuality
SIO_000300: -6.019e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.75e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 6.75e1
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GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 457
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variant carriers: 0

GenotypeQuality
all individuals: 389
bin: 5.75e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 4258
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9690
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 502
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4276
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5382
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3230
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.964544053124629e-5
allele num: 33732
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.17e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.2e-3

MQRankSum
type: SiteQuality
SIO_000300: -6.33e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.751e0

FS
type: SiteQuality
SIO_000300: 4.075e0

MQ
type: SiteQuality
SIO_000300: 5.939e1

QD
type: SiteQuality
SIO_000300: 1.4e0

VQSLOD
type: SiteQuality
SIO_000300: -3.082e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.17e-1

DP
type: SiteQuality
SIO_000300: 9.6932e5

GenotypeDepth
all individuals: 1197
bin: 3.75e1
variant carriers: 1166

GenotypeDepth
all individuals: 17780
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variant carriers: 17260

GenotypeDepth
all individuals: 407
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variant carriers: 403

GenotypeQuality
all individuals: 4979
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variant carriers: 4964

GenotypeQuality
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variant carriers: 3182

GenotypeQuality
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variant carriers: 2717

GenotypeQuality
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bin: 1.25e1
variant carriers: 1084

GenotypeQuality
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bin: 2.5e0
variant carriers: 212

GenotypeQuality
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bin: 2.75e1
variant carriers: 2752

GenotypeQuality
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bin: 8.25e1
variant carriers: 766

GenotypeQuality
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bin: 6.75e1
variant carriers: 1094

GenotypeQuality
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variant carriers: 5412

GenotypeQuality
all individuals: 2008
bin: 6.25e1
variant carriers: 1573

GenotypeQuality
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bin: 7.5e0
variant carriers: 773

GenotypeQuality
all individuals: 696
bin: 8.75e1
variant carriers: 691

GenotypeQuality
all individuals: 807
bin: 7.75e1
variant carriers: 786

GenotypeQuality
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bin: 4.75e1
variant carriers: 3770

GenotypeQuality
all individuals: 5474
bin: 2.25e1
variant carriers: 4469

GenotypeQuality
all individuals: 888
bin: 9.25e1
variant carriers: 877

GenotypeQuality
all individuals: 2279
bin: 4.25e1
variant carriers: 2272

GenotypeQuality
all individuals: 508
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variant carriers: 487

GenotypeQuality
all individuals: 1211
bin: 5.75e1
variant carriers: 1205

GenotypeQuality
all individuals: 17027
bin: 9.75e1
variant carriers: 16945

South Asian
type: Population
allele count: 7780
allele frequency: 7.039449873326095e-1
allele num: 11052
num of homozygotes: 2685

African
type: Population
allele count: 4707
allele frequency: 7.208269525267994e-1
allele num: 6530
num of homozygotes: 1640

European (Finnish)
type: Population
allele count: 4088
allele frequency: 8.757497857754927e-1
allele num: 4668
num of homozygotes: 1766

European (Non-Finnish)
type: Population
allele count: 40871
allele frequency: 8.572297495700323e-1
allele num: 47678
num of homozygotes: 17325

Latino
type: Population
allele count: 6614
allele frequency: 9.03551912568306e-1
allele num: 7320
num of homozygotes: 2968

Other
type: Population
allele count: 533
allele frequency: 8.35423197492163e-1
allele num: 638
num of homozygotes: 220

East Asian
type: Population
allele count: 5688
allele frequency: 9.147635895786427e-1
allele num: 6218
num of homozygotes: 2587

QD
type: SiteQuality
SIO_000300: 2.818e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.63e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.12e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 7.8e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.2e-1

DP
type: SiteQuality
SIO_000300: 1.20194e6

FS
type: SiteQuality
SIO_000300: 5.53e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.09e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.72e-1

GenotypeDepth
all individuals: 407
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 3895
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variant carriers: 0

GenotypeDepth
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2793
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1267
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GenotypeQuality
all individuals: 2008
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variant carriers: 0

GenotypeQuality
all individuals: 781
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variant carriers: 0

GenotypeQuality
all individuals: 17027
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1619
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GenotypeQuality
all individuals: 807
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 2279
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variant carriers: 0

GenotypeQuality
all individuals: 3256
bin: 1.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6530
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6218
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7320
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4668
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11052
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 638
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47678
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.20194e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.12e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.72e-1

QD
type: SiteQuality
SIO_000300: 2.818e1

VQSLOD
type: SiteQuality
SIO_000300: 6.09e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.63e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.2e-1

FS
type: SiteQuality
SIO_000300: 5.53e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.8e-2

GenotypeDepth
all individuals: 318
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 567
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variant carriers: 0

GenotypeDepth
all individuals: 83
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variant carriers: 0

GenotypeQuality
all individuals: 1578
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 8790
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 202
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variant carriers: 0

GenotypeQuality
all individuals: 110
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GenotypeQuality
all individuals: 679
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variant carriers: 0

GenotypeQuality
all individuals: 7386
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 139
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variant carriers: 0

GenotypeQuality
all individuals: 31504
bin: 2.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2500
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 416
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4398
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.10692937790569e-4
allele num: 9034
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3128
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3158
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 27064
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.95e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.365e0

BaseQRankSum
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MQ
type: SiteQuality
SIO_000300: 5.915e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.75e-2

FS
type: SiteQuality
SIO_000300: 2.057e0

DP
type: SiteQuality
SIO_000300: 7.52823e5

ClippingRankSum
type: SiteQuality
SIO_000300: 1.05e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.518e0

QD
type: SiteQuality
SIO_000300: 1.857e1

GenotypeDepth
all individuals: 37
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variant carriers: 0

GenotypeDepth
all individuals: 1784
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variant carriers: 0

GenotypeDepth
all individuals: 7
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variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 1411
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
all individuals: 9320
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 209
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GenotypeQuality
all individuals: 66
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2984
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3048
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4328
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8960
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 7.591861524445795e-5
allele num: 26344
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2412
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.32e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.61e-1

BaseQRankSum
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FS
type: SiteQuality
SIO_000300: 1.617e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.91e-2

DP
type: SiteQuality
SIO_000300: 7.4518e5

MQRankSum
type: SiteQuality
SIO_000300: 3.28e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.61e-1

QD
type: SiteQuality
SIO_000300: 1.57e1

GenotypeDepth
all individuals: 21
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 254
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variant carriers: 0

GenotypeDepth
all individuals: 102
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 77
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
all individuals: 189
bin: 4.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 1376
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GenotypeQuality
all individuals: 393
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2926
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 400
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4220
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 25504
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2820
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8850
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2328
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.644e0

DP
type: SiteQuality
SIO_000300: 7.33017e5

FS
type: SiteQuality
SIO_000300: 1.45e0

ClippingRankSum
type: SiteQuality
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ReadPosRankSum
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QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -3.22e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.01e-2

VQSLOD
type: SiteQuality
SIO_000300: -2.07e-2

GenotypeDepth
all individuals: 37
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 83
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variant carriers: 0

GenotypeDepth
all individuals: 7
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GenotypeQuality
all individuals: 145
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GenotypeQuality
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GenotypeQuality
all individuals: 1073
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 99
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GenotypeQuality
all individuals: 128
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GenotypeQuality
all individuals: 1293
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1281
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GenotypeQuality
all individuals: 1292
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12947
bin: 7.5e0
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GenotypeQuality
all individuals: 444
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 509
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 292
bin: 8.25e1
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GenotypeQuality
all individuals: 2364
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 358
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GenotypeQuality
all individuals: 6418
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1484
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 230
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3854
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 374
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2424
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2024
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 22734
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2244
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.180637544273908e-4
allele num: 8470
num of homozygotes: 0

BaseQRankSum
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SIO_000300: 0.0e0

ClippingRankSum
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VQSLOD
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SIO_000300: -2.328e-1

FS
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SIO_000300: 2.687e0

MQRankSum
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SIO_000300: 3.65e-1

QD
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InbreedingCoeff
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SIO_000300: -2.56e-2

DP
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SIO_000300: 6.95251e5

MQ
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ReadPosRankSum
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SIO_000300: -5.5e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 1.25e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 2390
num of homozygotes: 0

South Asian
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allele frequency: 1.183712121212121e-4
allele num: 8448
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1976
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 3818
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.48e-1

VQSLOD
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InbreedingCoeff
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MQ
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QD
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ClippingRankSum
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FS
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DP
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MQRankSum
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SIO_000300: 2.48e-1

BaseQRankSum
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SIO_000300: -1.297e0

GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 3810
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 9.140767824497258e-4
allele num: 2188
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 22280
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 366
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8424
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1962
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.37e-1

QD
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SIO_000300: 9.93e0

BaseQRankSum
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VQSLOD
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InbreedingCoeff
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SIO_000300: -2.59e-2

MQ
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SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.44e-1

ReadPosRankSum
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SIO_000300: 1.38e0

FS
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SIO_000300: 3.698e0

DP
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SIO_000300: 6.867e5

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2322
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3746
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 21690
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 1902
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 2098
num of homozygotes: 0

South Asian
type: Population
allele count: 6
allele frequency: 7.201152184349496e-4
allele num: 8332
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 362
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.46e-1

VQSLOD
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FS
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SIO_000300: 1.4442e1

MQ
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MQRankSum
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ReadPosRankSum
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InbreedingCoeff
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SIO_000300: -2.75e-2

QD
type: SiteQuality
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DP
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SIO_000300: 6.79329e5

ClippingRankSum
type: SiteQuality
SIO_000300: 4.21e-1

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 1934
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 18982
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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Other
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num of homozygotes: 0

South Asian
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allele frequency: 1.292323597828896e-4
allele num: 7738
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VQSLOD
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MQRankSum
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FS
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InbreedingCoeff
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ClippingRankSum
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ReadPosRankSum
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MQ
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DP
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QD
type: SiteQuality
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BaseQRankSum
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SIO_000300: -2.166e0

GenotypeDepth
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variant carriers: 0

GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 6.043756799226399e-5
allele num: 16546
num of homozygotes: 0

East Asian
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South Asian
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African
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European (Finnish)
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allele frequency: 0.0e0
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Latino
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Other
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MQ
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QD
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MQRankSum
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ReadPosRankSum
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VQSLOD
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BaseQRankSum
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InbreedingCoeff
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ClippingRankSum
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FS
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DP
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GenotypeDepth
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GenotypeDepth
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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European (Finnish)
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African
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European (Non-Finnish)
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East Asian
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South Asian
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Latino
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InbreedingCoeff
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MQRankSum
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BaseQRankSum
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MQ
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ClippingRankSum
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VQSLOD
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FS
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ReadPosRankSum
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QD
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DP
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GenotypeDepth
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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European (Finnish)
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South Asian
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Latino
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European (Non-Finnish)
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
allele num: 210
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.868e0

FS
type: SiteQuality
SIO_000300: 4.191e0

MQRankSum
type: SiteQuality
SIO_000300: 5.43e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.919e0

DP
type: SiteQuality
SIO_000300: 4.46914e5

QD
type: SiteQuality
SIO_000300: 1.282e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.195e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.86e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.485e0

GenotypeDepth
all individuals: 102
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1462
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 7629
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1412
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 376
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 761
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1033
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 253
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3786
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2001
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4360
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29824
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 222
bin: 4.75e1
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GenotypeQuality
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bin: 8.25e1
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GenotypeQuality
all individuals: 28
bin: 5.75e1
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1121
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 232
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 209
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 776
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 4.317789291882556e-4
allele num: 2316
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 192
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5942
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10126
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 444
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 724
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.84e-1

MQ
type: SiteQuality
SIO_000300: 6.02e1

VQSLOD
type: SiteQuality
SIO_000300: -8.247e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.29e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.33e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.2e-1

MQRankSum
type: SiteQuality
SIO_000300: -9.22e-1

FS
type: SiteQuality
SIO_000300: 4.691e0

DP
type: SiteQuality
SIO_000300: 4.10966e5

QD
type: SiteQuality
SIO_000300: 1.367e1

GenotypeDepth
all individuals: 279
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24892
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 368
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7569
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3114
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 626
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 507
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4216
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 721
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2576
bin: 6.25e1
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 708
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 102
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variant carriers: 0

GenotypeQuality
all individuals: 188
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 923
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 121
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 394
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7464
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1888
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 248
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8098
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 180
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 594
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.42e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.950000000000001e-2

VQSLOD
type: SiteQuality
SIO_000300: 1.5e0

DP
type: SiteQuality
SIO_000300: 3.5858e5

BaseQRankSum
type: SiteQuality
SIO_000300: -7.27e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 7.31e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.27e-1

QD
type: SiteQuality
SIO_000300: 1.046e1

GenotypeDepth
all individuals: 66
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 574
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3983
bin: 1.25e1
variant carriers: 4

GenotypeQuality
all individuals: 106
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variant carriers: 0

GenotypeQuality
all individuals: 963
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28076
bin: 7.5e0
variant carriers: 3

GenotypeQuality
all individuals: 3607
bin: 6.25e1
variant carriers: 2

GenotypeQuality
all individuals: 2268
bin: 1.75e1
variant carriers: 2

GenotypeQuality
all individuals: 410
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 286
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4424
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 115
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variant carriers: 0

GenotypeQuality
all individuals: 375
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variant carriers: 1

GenotypeQuality
all individuals: 651
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 473
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3555
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 331
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 240
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 130
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 730
bin: 9.75e1
variant carriers: 25

GenotypeQuality
all individuals: 235
bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 2
allele frequency: 1.098901098901099e-2
allele num: 182
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 3.3003300330033e-3
allele num: 606
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 3.671970624235006e-4
allele num: 8170
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 3.968253968253968e-3
allele num: 252
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1928
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 2.538071065989848e-3
allele num: 394
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 2.634351949420442e-4
allele num: 7592
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.941e1

DP
type: SiteQuality
SIO_000300: 3.7133e5

ClippingRankSum
type: SiteQuality
SIO_000300: -4.79e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.298e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.75e-1

FS
type: SiteQuality
SIO_000300: 4.098e0

BaseQRankSum
type: SiteQuality
SIO_000300: 9.370000000000001e-1

QD
type: SiteQuality
SIO_000300: 1.71e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.14e-2

MQRankSum
type: SiteQuality
SIO_000300: -2.69e-1

GenotypeDepth
all individuals: 129
bin: 4.75e1
variant carriers: 111

GenotypeQuality
all individuals: 983
bin: 6.75e1
variant carriers: 426

GenotypeQuality
all individuals: 850
bin: 2.75e1
variant carriers: 644

GenotypeQuality
all individuals: 2540
bin: 1.25e1
variant carriers: 1107

GenotypeQuality
all individuals: 1856
bin: 1.75e1
variant carriers: 1138

GenotypeQuality
all individuals: 231
bin: 4.75e1
variant carriers: 75

GenotypeQuality
all individuals: 263
bin: 5.25e1
variant carriers: 142

GenotypeQuality
all individuals: 465
bin: 7.25e1
variant carriers: 309

GenotypeQuality
all individuals: 368
bin: 3.75e1
variant carriers: 107

GenotypeQuality
all individuals: 311
bin: 8.75e1
variant carriers: 274

GenotypeQuality
all individuals: 2687
bin: 2.25e1
variant carriers: 555

GenotypeQuality
all individuals: 277
bin: 8.25e1
variant carriers: 199

GenotypeQuality
all individuals: 4501
bin: 9.75e1
variant carriers: 4413

GenotypeQuality
all individuals: 10337
bin: 2.5e0
variant carriers: 8

GenotypeQuality
all individuals: 17340
bin: 7.5e0
variant carriers: 1632

GenotypeQuality
all individuals: 142
bin: 4.25e1
variant carriers: 38

GenotypeQuality
all individuals: 262
bin: 5.75e1
variant carriers: 212

GenotypeQuality
all individuals: 870
bin: 3.25e1
variant carriers: 581

GenotypeQuality
all individuals: 347
bin: 7.75e1
variant carriers: 215

GenotypeQuality
all individuals: 3185
bin: 6.25e1
variant carriers: 369

GenotypeQuality
all individuals: 298
bin: 9.25e1
variant carriers: 271

Other
type: Population
allele count: 61
allele frequency: 3.177083333333333e-1
allele num: 192
num of homozygotes: 5

South Asian
type: Population
allele count: 1298
allele frequency: 1.695402298850575e-1
allele num: 7656
num of homozygotes: 122

East Asian
type: Population
allele count: 423
allele frequency: 6.257396449704142e-1
allele num: 676
num of homozygotes: 129

European (Non-Finnish)
type: Population
allele count: 2892
allele frequency: 3.345673299398427e-1
allele num: 8644
num of homozygotes: 436

African
type: Population
allele count: 427
allele frequency: 2.130738522954092e-1
allele num: 2004
num of homozygotes: 44

Latino
type: Population
allele count: 161
allele frequency: 3.851674641148325e-1
allele num: 418
num of homozygotes: 28

European (Finnish)
type: Population
allele count: 158
allele frequency: 4.388888888888889e-1
allele num: 360
num of homozygotes: 26

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.777e1

FS
type: SiteQuality
SIO_000300: 7.77e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.96e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.58e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.48e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.63e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.495e0

DP
type: SiteQuality
SIO_000300: 4.10398e5

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

GenotypeDepth
all individuals: 2
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 152
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variant carriers: 0

GenotypeQuality
all individuals: 175
bin: 9.75e1
variant carriers: 6

GenotypeQuality
all individuals: 68
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GenotypeQuality
all individuals: 215
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GenotypeQuality
all individuals: 318
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GenotypeQuality
all individuals: 84
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GenotypeQuality
all individuals: 3980
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variant carriers: 0

GenotypeQuality
all individuals: 481
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GenotypeQuality
all individuals: 286
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GenotypeQuality
all individuals: 5104
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GenotypeQuality
all individuals: 28824
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variant carriers: 2

GenotypeQuality
all individuals: 314
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GenotypeQuality
all individuals: 2955
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GenotypeQuality
all individuals: 382
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GenotypeQuality
all individuals: 1077
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 196
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2791
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4994
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 484
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 9.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 194
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 4.766444232602478e-4
allele num: 8392
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 660
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 330
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1964
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7678
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.96e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.72e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.87e-1

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.137e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.16e0

FS
type: SiteQuality
SIO_000300: 5.364e0

DP
type: SiteQuality
SIO_000300: 3.78584e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.173e1

GenotypeDepth
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 469
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 261
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 169
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variant carriers: 2

GenotypeQuality
all individuals: 320
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GenotypeQuality
all individuals: 174
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GenotypeQuality
all individuals: 5156
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variant carriers: 0

GenotypeQuality
all individuals: 1070
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GenotypeQuality
all individuals: 64
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GenotypeQuality
all individuals: 2787
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GenotypeQuality
all individuals: 352
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GenotypeQuality
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GenotypeQuality
all individuals: 187
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GenotypeQuality
all individuals: 3880
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GenotypeQuality
all individuals: 157
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GenotypeQuality
all individuals: 68
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GenotypeQuality
all individuals: 68
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GenotypeQuality
all individuals: 323
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GenotypeQuality
all individuals: 463
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2569
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5508
bin: 2.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 194
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 664
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7676
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 338
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 408
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1968
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.189909566872918e-4
allele num: 8404
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.06e-1

FS
type: SiteQuality
SIO_000300: 3.066e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.38e0

VQSLOD
type: SiteQuality
SIO_000300: 7.21e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.82e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.06e-1

DP
type: SiteQuality
SIO_000300: 3.8149e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.06e-1

QD
type: SiteQuality
SIO_000300: 1.348e1

GenotypeDepth
all individuals: 3098
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 178
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variant carriers: 0

GenotypeQuality
all individuals: 351
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variant carriers: 0

GenotypeQuality
all individuals: 58
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GenotypeQuality
all individuals: 2411
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variant carriers: 0

GenotypeQuality
all individuals: 3797
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variant carriers: 0

GenotypeQuality
all individuals: 67
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GenotypeQuality
all individuals: 311
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GenotypeQuality
all individuals: 29475
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GenotypeQuality
all individuals: 453
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variant carriers: 0

GenotypeQuality
all individuals: 1067
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variant carriers: 0

GenotypeQuality
all individuals: 188
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variant carriers: 0

GenotypeQuality
all individuals: 2852
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 240
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 477
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 146
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GenotypeQuality
all individuals: 64
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 168
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 307
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 5733
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5220
bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 194
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 408
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.300728407908429e-4
allele num: 7688
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1966
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 660
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8380
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 340
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.89e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.537e0

DP
type: SiteQuality
SIO_000300: 3.8332e5

QD
type: SiteQuality
SIO_000300: 3.23e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.88e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.7e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.36e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.518e0

GenotypeDepth
all individuals: 22
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1057
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 303
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3488
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 274
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 408
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 443
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 215
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 161
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3020
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3415
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29377
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5202
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6170
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 290
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 287
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 404
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 192
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 668
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 342
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8398
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1960
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7728
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 5.82e0

DP
type: SiteQuality
SIO_000300: 3.93986e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.23e0

MQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.83e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.15e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.23e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.36e-1

GenotypeDepth
all individuals: 2
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3376
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 292
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 165
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 29733
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 294
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 668
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 348
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8404
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7760
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 5.060728744939271e-4
allele num: 1976
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 404
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 194
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.78e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.129e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.07e-2

FS
type: SiteQuality
SIO_000300: 3.09e0

QD
type: SiteQuality
SIO_000300: 9.949999999999999e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.03e0

MQ
type: SiteQuality
SIO_000300: 5.281e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.246e0

MQRankSum
type: SiteQuality
SIO_000300: 2.78e-1

DP
type: SiteQuality
SIO_000300: 3.95845e5

GenotypeDepth
all individuals: 29916
bin: 2.5e0
variant carriers: 1

GenotypeDepth
all individuals: 1
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 34
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1077
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 143
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 279
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 28257
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2119
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 165
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 14823
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1733
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 475
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 66
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1450
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 91
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 175
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 106
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 361
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6069
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 278
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 64
bin: 8.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8694
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 712
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 456
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7848
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 426
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1996
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 194
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.622e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.3e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -4.06e-1

DP
type: SiteQuality
SIO_000300: 4.41337e5

QD
type: SiteQuality
SIO_000300: 7.91e0

VQSLOD
type: SiteQuality
SIO_000300: -1.836e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.5e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.61e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeDepth
all individuals: 100
bin: 4.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6
bin: 6.75e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 8.25e1
variant carriers: 0

GenotypeDepth
all individuals: 0
bin: 8.75e1
variant carriers: 0

GenotypeDepth
all individuals: 224
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 165
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1081
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1324
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27972
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 473
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1670
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1956
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 281
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 366
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 74
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6145
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 277
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15542
bin: 2.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 428
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 198
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1994
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 706
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 484
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8746
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7856
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 4.44295e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.273e1

VQSLOD
type: SiteQuality
SIO_000300: 3.8e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.22e-2

GenotypeDepth
all individuals: 1
bin: 9.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 6
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1712
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16292
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 61
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1195
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 469
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2018
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 276
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27367
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 379
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 154
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 165
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 6235
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 283
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1083
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 200
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7868
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 744
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 462
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.131733816206428e-4
allele num: 8836
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2016
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 426
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.37e-1

QD
type: SiteQuality
SIO_000300: 1.242e1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.9e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -9.9e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.08e-2

DP
type: SiteQuality
SIO_000300: 4.48767e5

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 5.56e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.0e-2

GenotypeDepth
all individuals: 8
bin: 6.25e1
variant carriers: 0

GenotypeDepth
all individuals: 1765
bin: 1.25e1
variant carriers: 0

GenotypeDepth
all individuals: 220
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 274
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variant carriers: 0

GenotypeQuality
all individuals: 46
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GenotypeQuality
all individuals: 84
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GenotypeQuality
all individuals: 292
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variant carriers: 0

GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2746
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 138
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26004
bin: 7.5e0
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GenotypeQuality
all individuals: 70
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1913
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 573
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 9.25e1
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GenotypeQuality
all individuals: 185
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 165
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1074
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 95
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8882
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 784
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 560
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 442
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 2008
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.265502404454569e-4
allele num: 7902
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 204
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.85e-2

QD
type: SiteQuality
SIO_000300: 1.161e1

VQSLOD
type: SiteQuality
SIO_000300: -2.75e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.31e0

FS
type: SiteQuality
SIO_000300: 2.115e0

DP
type: SiteQuality
SIO_000300: 4.545e5

MQRankSum
type: SiteQuality
SIO_000300: -4.76e-1

MQ
type: SiteQuality
SIO_000300: 5.88e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.25e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.61e0

GenotypeDepth
all individuals: 0
bin: 9.75e1
variant carriers: 0

GenotypeDepth
all individuals: 6
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variant carriers: 0

GenotypeDepth
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bin: 2.25e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 277
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 17840
bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
all individuals: 25052
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GenotypeQuality
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bin: 1.25e1
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GenotypeQuality
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bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 215
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2833
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
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variant carriers: 0

GenotypeQuality
all individuals: 5935
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 598
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 113
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 63
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variant carriers: 0

GenotypeQuality
all individuals: 1064
bin: 6.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 4.9800796812749e-4
allele num: 2008
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 470
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 814
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 622
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7924
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8936
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 208
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.95e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.099e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -8.839e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.67e-2

MQRankSum
type: SiteQuality
SIO_000300: 9.56e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.1e0

DP
type: SiteQuality
SIO_000300: 4.61766e5

QD
type: SiteQuality
SIO_000300: 9.93e0

GenotypeDepth
all individuals: 22
bin: 5.25e1
variant carriers: 0

GenotypeDepth
all individuals: 3300
bin: 2.25e1
variant carriers: 0

GenotypeDepth
all individuals: 8
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 456
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1383
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2058
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17901
bin: 2.25e1
variant carriers: 1

GenotypeQuality
all individuals: 58
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1052
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 44
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 274
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 24536
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 216
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 165
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 3157
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 269
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 97
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5883
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 101
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 585
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 3.348214285714286e-4
allele num: 8960
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7930
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 202
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 1992
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 582
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 478
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 832
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 7.02e0

MQRankSum
type: SiteQuality
SIO_000300: 7.2e-1

FS
type: SiteQuality
SIO_000300: 2.43e0

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.62e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.83e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.291e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

DP
type: SiteQuality
SIO_000300: 4.64636e5

GenotypeDepth
all individuals: 45
bin: 4.75e1
variant carriers: 0

GenotypeDepth
all individuals: 34
bin: 5.25e1
variant carriers: 1

GenotypeDepth
all individuals: 15
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 94
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3580
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 99
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22286
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 19364
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 349
bin: 3.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2791
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 241
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 249
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 102
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1774
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 984
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5805
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 50
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 160
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 468
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 146
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 123
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 6.666666666666666e-4
allele num: 1500
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 528
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 540
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7924
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7950
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.098901098901099e-3
allele num: 910
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 196
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.04609e2

VQSLOD
type: SiteQuality
SIO_000300: -1.955e2

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.46e-2

DP
type: SiteQuality
SIO_000300: 4.86378e5

BaseQRankSum
type: SiteQuality
SIO_000300: -2.482e0

MQ
type: SiteQuality
SIO_000300: 5.753e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.11e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.669e0

MQRankSum
type: SiteQuality
SIO_000300: -8.95e-1

QD
type: SiteQuality
SIO_000300: 3.72e0