10-61012536-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61012536
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 61012536
    reference: chr 10
allele count: 3
allele frequency: 2.485789569626966e-5
allele num: 120686
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000424249
  ensembl transcript: ENST00000513059
  gene symbol: FAM13C
  hgvsc: ENST00000513059.1:c.*1461+23G>A
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000277705
  ensembl transcript: ENST00000277705
  gene symbol: FAM13C
  hgvsc: ENST00000277705.6:c.1592+23G>A
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362974
  ensembl transcript: ENST00000373867
  gene symbol: FAM13C
  hgvsc: ENST00000373867.3:c.1280+23G>A
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000423896
  ensembl transcript: ENST00000468840
  gene symbol: FAM13C
  hgvsc: ENST00000468840.2:c.1283+23G>A
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000391993
  ensembl transcript: ENST00000419214
  gene symbol: FAM13C
  hgvsc: ENST00000419214.2:c.1238+23G>A
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl transcript: ENST00000489341
  gene symbol: FAM13C
  hgvsc: ENST00000489341.1:n.437+23G>A
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000392302
  ensembl transcript: ENST00000435852
  gene symbol: FAM13C
  hgvsc: ENST00000435852.2:c.1532+23G>A
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000395661
  ensembl transcript: ENST00000442566
  gene symbol: FAM13C
  hgvsc: ENST00000442566.3:c.1595+23G>A
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362975
  ensembl transcript: ENST00000373868
  gene symbol: FAM13C
  hgvsc: ENST00000373868.2:c.1532+23G>A
  variant of: http://identifiers.org/hgnc/19371
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16270
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 497
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2146
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4535
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19906
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9942
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1351
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1016
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10061
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 3470
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4703
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: Latino
population: African
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum

10-61012556-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61012556
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 61012556
    reference: chr 10
allele count: 1
allele frequency: 8.251505899826718e-6
allele num: 121190
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362974
  ensembl transcript: ENST00000373867
  gene symbol: FAM13C
  hgvsc: ENST00000373867.3:c.1280+3G>A
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000392302
  ensembl transcript: ENST00000435852
  gene symbol: FAM13C
  hgvsc: ENST00000435852.2:c.1532+3G>A
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000277705
  ensembl transcript: ENST00000277705
  gene symbol: FAM13C
  hgvsc: ENST00000277705.6:c.1592+3G>A
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl transcript: ENST00000489341
  gene symbol: FAM13C
  hgvsc: ENST00000489341.1:n.437+3G>A
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362975
  ensembl transcript: ENST00000373868
  gene symbol: FAM13C
  hgvsc: ENST00000373868.2:c.1532+3G>A
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000395661
  ensembl transcript: ENST00000442566
  gene symbol: FAM13C
  hgvsc: ENST00000442566.3:c.1595+3G>A
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000423896
  ensembl transcript: ENST00000468840
  gene symbol: FAM13C
  hgvsc: ENST00000468840.2:c.1283+3G>A
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000424249
  ensembl transcript: ENST00000513059
  gene symbol: FAM13C
  hgvsc: ENST00000513059.1:c.*1461+3G>A
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000391993
  ensembl transcript: ENST00000419214
  gene symbol: FAM13C
  hgvsc: ENST00000419214.2:c.1238+3G>A
  variant of: http://identifiers.org/hgnc/19371
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20091
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2153
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1353
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1015
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10108
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16663
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4555
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1592
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
hgvs: c.1532+3G>A
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum

http://identifiers.org/exac.variant/10-61012559-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61012559
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 61012559
    reference: chr 10
allele count: 2
allele frequency: 1.649756660892518e-5
allele num: 121230
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362974
  ensembl transcript: ENST00000373867
  gene symbol: FAM13C
  hgvsc: ENST00000373867.3:c.1280T>G
  hgvsp: ENSP00000362974.3:p.Met427Arg
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000392302
  ensembl transcript: ENST00000435852
  gene symbol: FAM13C
  hgvsc: ENST00000435852.2:c.1532T>G
  hgvsp: ENSP00000392302.2:p.Met511Arg
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000423896
  ensembl transcript: ENST00000468840
  gene symbol: FAM13C
  hgvsc: ENST00000468840.2:c.1283T>G
  hgvsp: ENSP00000423896.1:p.Met428Arg
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000391993
  ensembl transcript: ENST00000419214
  gene symbol: FAM13C
  hgvsc: ENST00000419214.2:c.1238T>G
  hgvsp: ENSP00000391993.2:p.Met413Arg
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000148541
  ensembl transcript: ENST00000489341
  gene symbol: FAM13C
  hgvsc: ENST00000489341.1:n.437T>G
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362975
  ensembl transcript: ENST00000373868
  gene symbol: FAM13C
  hgvsc: ENST00000373868.2:c.1532T>G
  hgvsp: ENSP00000362975.2:p.Met511Arg
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000277705
  ensembl transcript: ENST00000277705
  gene symbol: FAM13C
  hgvsc: ENST00000277705.6:c.1592T>G
  hgvsp: ENSP00000277705.6:p.Met531Arg
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000395661
  ensembl transcript: ENST00000442566
  gene symbol: FAM13C
  hgvsc: ENST00000442566.3:c.1595T>G
  hgvsp: ENSP00000395661.3:p.Met532Arg
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000424249
  ensembl transcript: ENST00000513059
  gene symbol: FAM13C
  hgvsc: ENST00000513059.1:c.*1461T>G
  variant of: http://identifiers.org/hgnc/19371
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2154
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4555
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20094
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1351
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16690
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 952
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10106
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1015
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 26599
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Met511Arg
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: European (Finnish)
reference allele: A
site quality: DP
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum

10-61012561-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61012561
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 61012561
    reference: chr 10
allele count: 2
allele frequency: 1.649566164098842e-5
allele num: 121244
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000424249
  ensembl transcript: ENST00000513059
  gene symbol: FAM13C
  hgvsc: ENST00000513059.1:c.*1459C>T
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000395661
  ensembl transcript: ENST00000442566
  gene symbol: FAM13C
  hgvsc: ENST00000442566.3:c.1593C>T
  hgvsp: ENST00000442566.3:c.1593C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362974
  ensembl transcript: ENST00000373867
  gene symbol: FAM13C
  hgvsc: ENST00000373867.3:c.1278C>T
  hgvsp: ENST00000373867.3:c.1278C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362975
  ensembl transcript: ENST00000373868
  gene symbol: FAM13C
  hgvsc: ENST00000373868.2:c.1530C>T
  hgvsp: ENST00000373868.2:c.1530C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000148541
  ensembl transcript: ENST00000489341
  gene symbol: FAM13C
  hgvsc: ENST00000489341.1:n.435C>T
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000423896
  ensembl transcript: ENST00000468840
  gene symbol: FAM13C
  hgvsc: ENST00000468840.2:c.1281C>T
  hgvsp: ENST00000468840.2:c.1281C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000277705
  ensembl transcript: ENST00000277705
  gene symbol: FAM13C
  hgvsc: ENST00000277705.6:c.1590C>T
  hgvsp: ENST00000277705.6:c.1590C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000392302
  ensembl transcript: ENST00000435852
  gene symbol: FAM13C
  hgvsc: ENST00000435852.2:c.1530C>T
  hgvsp: ENST00000435852.2:c.1530C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000391993
  ensembl transcript: ENST00000419214
  gene symbol: FAM13C
  hgvsc: ENST00000419214.2:c.1236C>T
  hgvsp: ENST00000419214.2:c.1236C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19371
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10108
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16700
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 953
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1356
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4559
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20092
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2154
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1015
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 3.25e1
  variant carriers: 0
hgvs: c.1530C>T
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: DP

10-61012584-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61012584
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 61012584
    reference: chr 10
allele count: 1
allele frequency: 8.241984669908513e-6
allele num: 121330
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000277705
  ensembl transcript: ENST00000277705
  gene symbol: FAM13C
  hgvsc: ENST00000277705.6:c.1567A>G
  hgvsp: ENSP00000277705.6:p.Met523Val
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000392302
  ensembl transcript: ENST00000435852
  gene symbol: FAM13C
  hgvsc: ENST00000435852.2:c.1507A>G
  hgvsp: ENSP00000392302.2:p.Met503Val
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000395661
  ensembl transcript: ENST00000442566
  gene symbol: FAM13C
  hgvsc: ENST00000442566.3:c.1570A>G
  hgvsp: ENSP00000395661.3:p.Met524Val
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362974
  ensembl transcript: ENST00000373867
  gene symbol: FAM13C
  hgvsc: ENST00000373867.3:c.1255A>G
  hgvsp: ENSP00000362974.3:p.Met419Val
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000423896
  ensembl transcript: ENST00000468840
  gene symbol: FAM13C
  hgvsc: ENST00000468840.2:c.1258A>G
  hgvsp: ENSP00000423896.1:p.Met420Val
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000424249
  ensembl transcript: ENST00000513059
  gene symbol: FAM13C
  hgvsc: ENST00000513059.1:c.*1436A>G
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362975
  ensembl transcript: ENST00000373868
  gene symbol: FAM13C
  hgvsc: ENST00000373868.2:c.1507A>G
  hgvsp: ENSP00000362975.2:p.Met503Val
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148541
  ensembl transcript: ENST00000489341
  gene symbol: FAM13C
  hgvsc: ENST00000489341.1:n.412A>G
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000391993
  ensembl transcript: ENST00000419214
  gene symbol: FAM13C
  hgvsc: ENST00000419214.2:c.1213A>G
  hgvsp: ENSP00000391993.2:p.Met405Val
  variant of: http://identifiers.org/hgnc/19371
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20087
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16774
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 498
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10121
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2157
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1351
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4560
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1015
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 806
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3494
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3414
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Met503Val
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: South Asian
population: African
reference allele: T
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: MQRankSum

10-61012596-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61012596
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 61012596
    reference: chr 10
allele count: 28
allele frequency: 2.307413389590269e-4
allele num: 121348
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000395661
  ensembl transcript: ENST00000442566
  gene symbol: FAM13C
  hgvsc: ENST00000442566.3:c.1558C>T
  hgvsp: ENSP00000395661.3:p.Pro520Ser
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000391993
  ensembl transcript: ENST00000419214
  gene symbol: FAM13C
  hgvsc: ENST00000419214.2:c.1201C>T
  hgvsp: ENSP00000391993.2:p.Pro401Ser
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362975
  ensembl transcript: ENST00000373868
  gene symbol: FAM13C
  hgvsc: ENST00000373868.2:c.1495C>T
  hgvsp: ENSP00000362975.2:p.Pro499Ser
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000423896
  ensembl transcript: ENST00000468840
  gene symbol: FAM13C
  hgvsc: ENST00000468840.2:c.1246C>T
  hgvsp: ENSP00000423896.1:p.Pro416Ser
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000392302
  ensembl transcript: ENST00000435852
  gene symbol: FAM13C
  hgvsc: ENST00000435852.2:c.1495C>T
  hgvsp: ENSP00000392302.2:p.Pro499Ser
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000277705
  ensembl transcript: ENST00000277705
  gene symbol: FAM13C
  hgvsc: ENST00000277705.6:c.1555C>T
  hgvsp: ENSP00000277705.6:p.Pro519Ser
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000424249
  ensembl transcript: ENST00000513059
  gene symbol: FAM13C
  hgvsc: ENST00000513059.1:c.*1424C>T
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362974
  ensembl transcript: ENST00000373867
  gene symbol: FAM13C
  hgvsc: ENST00000373867.3:c.1243C>T
  hgvsp: ENSP00000362974.3:p.Pro415Ser
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148541
  ensembl transcript: ENST00000489341
  gene symbol: FAM13C
  hgvsc: ENST00000489341.1:n.400C>T
  variant of: http://identifiers.org/hgnc/19371
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10119
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4557
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20064
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16787
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 7.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2154
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1351
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1031
  bin: 9.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 8.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 10090
  bin: 9.75e1
  variant carriers: 28
genotype quality: GenotypeQuality
  all individuals: 4766
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Pro499Ser
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: InbreedingCoeff

10-61012596-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61012596
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 61012596
    reference: chr 10
allele count: 5
allele frequency: 4.120381052839767e-5
allele num: 121348
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000395661
  ensembl transcript: ENST00000442566
  gene symbol: FAM13C
  hgvsc: ENST00000442566.3:c.1558C>G
  hgvsp: ENSP00000395661.3:p.Pro520Ala
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362974
  ensembl transcript: ENST00000373867
  gene symbol: FAM13C
  hgvsc: ENST00000373867.3:c.1243C>G
  hgvsp: ENSP00000362974.3:p.Pro415Ala
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000277705
  ensembl transcript: ENST00000277705
  gene symbol: FAM13C
  hgvsc: ENST00000277705.6:c.1555C>G
  hgvsp: ENSP00000277705.6:p.Pro519Ala
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000391993
  ensembl transcript: ENST00000419214
  gene symbol: FAM13C
  hgvsc: ENST00000419214.2:c.1201C>G
  hgvsp: ENSP00000391993.2:p.Pro401Ala
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000392302
  ensembl transcript: ENST00000435852
  gene symbol: FAM13C
  hgvsc: ENST00000435852.2:c.1495C>G
  hgvsp: ENSP00000392302.2:p.Pro499Ala
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000423896
  ensembl transcript: ENST00000468840
  gene symbol: FAM13C
  hgvsc: ENST00000468840.2:c.1246C>G
  hgvsp: ENSP00000423896.1:p.Pro416Ala
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148541
  ensembl transcript: ENST00000489341
  gene symbol: FAM13C
  hgvsc: ENST00000489341.1:n.400C>G
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000424249
  ensembl transcript: ENST00000513059
  gene symbol: FAM13C
  hgvsc: ENST00000513059.1:c.*1424C>G
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362975
  ensembl transcript: ENST00000373868
  gene symbol: FAM13C
  hgvsc: ENST00000373868.2:c.1495C>G
  hgvsp: ENSP00000362975.2:p.Pro499Ala
  variant of: http://identifiers.org/hgnc/19371
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2154
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20064
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10119
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4557
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16787
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1031
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1351
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 316
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 502
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10090
  bin: 9.75e1
  variant carriers: 5
hgvs: p.Pro499Ala
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: DP
site quality: ReadPosRankSum

10-61012605-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61012605
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 61012605
    reference: chr 10
allele count: 10
allele frequency: 8.240354664864775e-5
allele num: 121354
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000423896
  ensembl transcript: ENST00000468840
  gene symbol: FAM13C
  hgvsc: ENST00000468840.2:c.1237G>A
  hgvsp: ENSP00000423896.1:p.Val413Ile
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000395661
  ensembl transcript: ENST00000442566
  gene symbol: FAM13C
  hgvsc: ENST00000442566.3:c.1549G>A
  hgvsp: ENSP00000395661.3:p.Val517Ile
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362974
  ensembl transcript: ENST00000373867
  gene symbol: FAM13C
  hgvsc: ENST00000373867.3:c.1234G>A
  hgvsp: ENSP00000362974.3:p.Val412Ile
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000391993
  ensembl transcript: ENST00000419214
  gene symbol: FAM13C
  hgvsc: ENST00000419214.2:c.1192G>A
  hgvsp: ENSP00000391993.2:p.Val398Ile
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362975
  ensembl transcript: ENST00000373868
  gene symbol: FAM13C
  hgvsc: ENST00000373868.2:c.1486G>A
  hgvsp: ENSP00000362975.2:p.Val496Ile
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000277705
  ensembl transcript: ENST00000277705
  gene symbol: FAM13C
  hgvsc: ENST00000277705.6:c.1546G>A
  hgvsp: ENSP00000277705.6:p.Val516Ile
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000392302
  ensembl transcript: ENST00000435852
  gene symbol: FAM13C
  hgvsc: ENST00000435852.2:c.1486G>A
  hgvsp: ENSP00000392302.2:p.Val496Ile
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000424249
  ensembl transcript: ENST00000513059
  gene symbol: FAM13C
  hgvsc: ENST00000513059.1:c.*1415G>A
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148541
  ensembl transcript: ENST00000489341
  gene symbol: FAM13C
  hgvsc: ENST00000489341.1:n.391G>A
  variant of: http://identifiers.org/hgnc/19371
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 807
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2159
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10130
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20049
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4558
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1353
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16802
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1020
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 4769
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3494
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Val496Ile
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: C
site quality: DP
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

10-61012638-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61012638
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 61012638
    reference: chr 10
allele count: 14
allele frequency: 1.153459554764612e-4
allele num: 121374
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000277705
  ensembl transcript: ENST00000277705
  gene symbol: FAM13C
  hgvsc: ENST00000277705.6:c.1513G>C
  hgvsp: ENSP00000277705.6:p.Val505Leu
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362975
  ensembl transcript: ENST00000373868
  gene symbol: FAM13C
  hgvsc: ENST00000373868.2:c.1453G>C
  hgvsp: ENSP00000362975.2:p.Val485Leu
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148541
  ensembl transcript: ENST00000489341
  gene symbol: FAM13C
  hgvsc: ENST00000489341.1:n.358G>C
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000392302
  ensembl transcript: ENST00000435852
  gene symbol: FAM13C
  hgvsc: ENST00000435852.2:c.1453G>C
  hgvsp: ENSP00000392302.2:p.Val485Leu
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000391993
  ensembl transcript: ENST00000419214
  gene symbol: FAM13C
  hgvsc: ENST00000419214.2:c.1159G>C
  hgvsp: ENSP00000391993.2:p.Val387Leu
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000423896
  ensembl transcript: ENST00000468840
  gene symbol: FAM13C
  hgvsc: ENST00000468840.2:c.1204G>C
  hgvsp: ENSP00000423896.1:p.Val402Leu
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362974
  ensembl transcript: ENST00000373867
  gene symbol: FAM13C
  hgvsc: ENST00000373867.3:c.1201G>C
  hgvsp: ENSP00000362974.3:p.Val401Leu
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000424249
  ensembl transcript: ENST00000513059
  gene symbol: FAM13C
  hgvsc: ENST00000513059.1:c.*1382G>C
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000395661
  ensembl transcript: ENST00000442566
  gene symbol: FAM13C
  hgvsc: ENST00000442566.3:c.1516G>C
  hgvsp: ENSP00000395661.3:p.Val506Leu
  variant of: http://identifiers.org/hgnc/19371
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10134
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20017
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4561
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1354
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1024
  bin: 9.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16839
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2161
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26716
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Val485Leu
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
population: South Asian
reference allele: C
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: QD
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD

10-61012638-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61012638
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 61012638
    reference: chr 10
allele count: 1
allele frequency: 8.238996819747227e-6
allele num: 121374
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000424249
  ensembl transcript: ENST00000513059
  gene symbol: FAM13C
  hgvsc: ENST00000513059.1:c.*1382G>A
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000391993
  ensembl transcript: ENST00000419214
  gene symbol: FAM13C
  hgvsc: ENST00000419214.2:c.1159G>A
  hgvsp: ENSP00000391993.2:p.Val387Ile
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000392302
  ensembl transcript: ENST00000435852
  gene symbol: FAM13C
  hgvsc: ENST00000435852.2:c.1453G>A
  hgvsp: ENSP00000392302.2:p.Val485Ile
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000277705
  ensembl transcript: ENST00000277705
  gene symbol: FAM13C
  hgvsc: ENST00000277705.6:c.1513G>A
  hgvsp: ENSP00000277705.6:p.Val505Ile
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362974
  ensembl transcript: ENST00000373867
  gene symbol: FAM13C
  hgvsc: ENST00000373867.3:c.1201G>A
  hgvsp: ENSP00000362974.3:p.Val401Ile
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000423896
  ensembl transcript: ENST00000468840
  gene symbol: FAM13C
  hgvsc: ENST00000468840.2:c.1204G>A
  hgvsp: ENSP00000423896.1:p.Val402Ile
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362975
  ensembl transcript: ENST00000373868
  gene symbol: FAM13C
  hgvsc: ENST00000373868.2:c.1453G>A
  hgvsp: ENSP00000362975.2:p.Val485Ile
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148541
  ensembl transcript: ENST00000489341
  gene symbol: FAM13C
  hgvsc: ENST00000489341.1:n.358G>A
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000395661
  ensembl transcript: ENST00000442566
  gene symbol: FAM13C
  hgvsc: ENST00000442566.3:c.1516G>A
  hgvsp: ENSP00000395661.3:p.Val506Ile
  variant of: http://identifiers.org/hgnc/19371
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10134
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16839
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20017
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1354
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1024
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2161
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4561
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3495
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1591
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Val485Ile
num of homozygotes: 0
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: MQ

10-61012641-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61012641
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 61012641
    reference: chr 10
allele count: 3
allele frequency: 2.47161759132627e-5
allele num: 121378
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000392302
  ensembl transcript: ENST00000435852
  gene symbol: FAM13C
  hgvsc: ENST00000435852.2:c.1450C>T
  hgvsp: ENSP00000392302.2:p.Pro484Ser
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000424249
  ensembl transcript: ENST00000513059
  gene symbol: FAM13C
  hgvsc: ENST00000513059.1:c.*1379C>T
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362974
  ensembl transcript: ENST00000373867
  gene symbol: FAM13C
  hgvsc: ENST00000373867.3:c.1198C>T
  hgvsp: ENSP00000362974.3:p.Pro400Ser
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000423896
  ensembl transcript: ENST00000468840
  gene symbol: FAM13C
  hgvsc: ENST00000468840.2:c.1201C>T
  hgvsp: ENSP00000423896.1:p.Pro401Ser
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148541
  ensembl transcript: ENST00000489341
  gene symbol: FAM13C
  hgvsc: ENST00000489341.1:n.355C>T
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000391993
  ensembl transcript: ENST00000419214
  gene symbol: FAM13C
  hgvsc: ENST00000419214.2:c.1156C>T
  hgvsp: ENSP00000391993.2:p.Pro386Ser
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362975
  ensembl transcript: ENST00000373868
  gene symbol: FAM13C
  hgvsc: ENST00000373868.2:c.1450C>T
  hgvsp: ENSP00000362975.2:p.Pro484Ser
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000277705
  ensembl transcript: ENST00000277705
  gene symbol: FAM13C
  hgvsc: ENST00000277705.6:c.1510C>T
  hgvsp: ENSP00000277705.6:p.Pro504Ser
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000395661
  ensembl transcript: ENST00000442566
  gene symbol: FAM13C
  hgvsc: ENST00000442566.3:c.1513C>T
  hgvsp: ENSP00000395661.3:p.Pro505Ser
  variant of: http://identifiers.org/hgnc/19371
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 952
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4564
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1357
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16841
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1019
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2163
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20009
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10138
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1589
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Pro484Ser
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff

10-61012644-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61012644
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 61012644
    reference: chr 10
allele count: 2
allele frequency: 1.647717910693689e-5
allele num: 121380
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000424249
  ensembl transcript: ENST00000513059
  gene symbol: FAM13C
  hgvsc: ENST00000513059.1:c.*1376G>A
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000392302
  ensembl transcript: ENST00000435852
  gene symbol: FAM13C
  hgvsc: ENST00000435852.2:c.1447G>A
  hgvsp: ENSP00000392302.2:p.Glu483Lys
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000395661
  ensembl transcript: ENST00000442566
  gene symbol: FAM13C
  hgvsc: ENST00000442566.3:c.1510G>A
  hgvsp: ENSP00000395661.3:p.Glu504Lys
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148541
  ensembl transcript: ENST00000489341
  gene symbol: FAM13C
  hgvsc: ENST00000489341.1:n.352G>A
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000277705
  ensembl transcript: ENST00000277705
  gene symbol: FAM13C
  hgvsc: ENST00000277705.6:c.1507G>A
  hgvsp: ENSP00000277705.6:p.Glu503Lys
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362975
  ensembl transcript: ENST00000373868
  gene symbol: FAM13C
  hgvsc: ENST00000373868.2:c.1447G>A
  hgvsp: ENSP00000362975.2:p.Glu483Lys
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000391993
  ensembl transcript: ENST00000419214
  gene symbol: FAM13C
  hgvsc: ENST00000419214.2:c.1153G>A
  hgvsp: ENSP00000391993.2:p.Glu385Lys
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362974
  ensembl transcript: ENST00000373867
  gene symbol: FAM13C
  hgvsc: ENST00000373867.3:c.1195G>A
  hgvsp: ENSP00000362974.3:p.Glu399Lys
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000423896
  ensembl transcript: ENST00000468840
  gene symbol: FAM13C
  hgvsc: ENST00000468840.2:c.1198G>A
  hgvsp: ENSP00000423896.1:p.Glu400Lys
  variant of: http://identifiers.org/hgnc/19371
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10136
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20011
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1358
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2163
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4565
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16846
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1016
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8377
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Glu483Lys
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD

10-61012646-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61012646
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 61012646
    reference: chr 10
allele count: 1
allele frequency: 8.238046594391538e-6
allele num: 121388
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000423896
  ensembl transcript: ENST00000468840
  gene symbol: FAM13C
  hgvsc: ENST00000468840.2:c.1196C>T
  hgvsp: ENSP00000423896.1:p.Thr399Ile
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000424249
  ensembl transcript: ENST00000513059
  gene symbol: FAM13C
  hgvsc: ENST00000513059.1:c.*1374C>T
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000391993
  ensembl transcript: ENST00000419214
  gene symbol: FAM13C
  hgvsc: ENST00000419214.2:c.1151C>T
  hgvsp: ENSP00000391993.2:p.Thr384Ile
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000392302
  ensembl transcript: ENST00000435852
  gene symbol: FAM13C
  hgvsc: ENST00000435852.2:c.1445C>T
  hgvsp: ENSP00000392302.2:p.Thr482Ile
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362975
  ensembl transcript: ENST00000373868
  gene symbol: FAM13C
  hgvsc: ENST00000373868.2:c.1445C>T
  hgvsp: ENSP00000362975.2:p.Thr482Ile
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362974
  ensembl transcript: ENST00000373867
  gene symbol: FAM13C
  hgvsc: ENST00000373867.3:c.1193C>T
  hgvsp: ENSP00000362974.3:p.Thr398Ile
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148541
  ensembl transcript: ENST00000489341
  gene symbol: FAM13C
  hgvsc: ENST00000489341.1:n.350C>T
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000395661
  ensembl transcript: ENST00000442566
  gene symbol: FAM13C
  hgvsc: ENST00000442566.3:c.1508C>T
  hgvsp: ENSP00000395661.3:p.Thr503Ile
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000277705
  ensembl transcript: ENST00000277705
  gene symbol: FAM13C
  hgvsc: ENST00000277705.6:c.1505C>T
  hgvsp: ENSP00000277705.6:p.Thr502Ile
  variant of: http://identifiers.org/hgnc/19371
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1016
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4565
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20009
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1360
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2163
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10139
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16843
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4765
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Thr482Ile
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: Other
population: African
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ

10-61012660-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61012660
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 61012660
    reference: chr 10
allele count: 1
allele frequency: 8.238453806989504e-6
allele num: 121382
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000392302
  ensembl transcript: ENST00000435852
  gene symbol: FAM13C
  hgvsc: ENST00000435852.2:c.1431C>T
  hgvsp: ENST00000435852.2:c.1431C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000423896
  ensembl transcript: ENST00000468840
  gene symbol: FAM13C
  hgvsc: ENST00000468840.2:c.1182C>T
  hgvsp: ENST00000468840.2:c.1182C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000424249
  ensembl transcript: ENST00000513059
  gene symbol: FAM13C
  hgvsc: ENST00000513059.1:c.*1360C>T
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362975
  ensembl transcript: ENST00000373868
  gene symbol: FAM13C
  hgvsc: ENST00000373868.2:c.1431C>T
  hgvsp: ENST00000373868.2:c.1431C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148541
  ensembl transcript: ENST00000489341
  gene symbol: FAM13C
  hgvsc: ENST00000489341.1:n.336C>T
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000391993
  ensembl transcript: ENST00000419214
  gene symbol: FAM13C
  hgvsc: ENST00000419214.2:c.1137C>T
  hgvsp: ENST00000419214.2:c.1137C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362974
  ensembl transcript: ENST00000373867
  gene symbol: FAM13C
  hgvsc: ENST00000373867.3:c.1179C>T
  hgvsp: ENST00000373867.3:c.1179C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000277705
  ensembl transcript: ENST00000277705
  gene symbol: FAM13C
  hgvsc: ENST00000277705.6:c.1491C>T
  hgvsp: ENST00000277705.6:c.1491C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000395661
  ensembl transcript: ENST00000442566
  gene symbol: FAM13C
  hgvsc: ENST00000442566.3:c.1494C>T
  hgvsp: ENST00000442566.3:c.1494C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19371
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10143
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4565
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16850
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1016
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1358
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 952
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20003
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2164
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Thr477Thr
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: European (Finnish)
population: African
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: DP

10-61012660-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61012660
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 61012660
    reference: chr 10
allele count: 1
allele frequency: 8.238453806989504e-6
allele num: 121382
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000391993
  ensembl transcript: ENST00000419214
  gene symbol: FAM13C
  hgvsc: ENST00000419214.2:c.1137C>A
  hgvsp: ENST00000419214.2:c.1137C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362975
  ensembl transcript: ENST00000373868
  gene symbol: FAM13C
  hgvsc: ENST00000373868.2:c.1431C>A
  hgvsp: ENST00000373868.2:c.1431C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000424249
  ensembl transcript: ENST00000513059
  gene symbol: FAM13C
  hgvsc: ENST00000513059.1:c.*1360C>A
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362974
  ensembl transcript: ENST00000373867
  gene symbol: FAM13C
  hgvsc: ENST00000373867.3:c.1179C>A
  hgvsp: ENST00000373867.3:c.1179C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000277705
  ensembl transcript: ENST00000277705
  gene symbol: FAM13C
  hgvsc: ENST00000277705.6:c.1491C>A
  hgvsp: ENST00000277705.6:c.1491C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000423896
  ensembl transcript: ENST00000468840
  gene symbol: FAM13C
  hgvsc: ENST00000468840.2:c.1182C>A
  hgvsp: ENST00000468840.2:c.1182C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000395661
  ensembl transcript: ENST00000442566
  gene symbol: FAM13C
  hgvsc: ENST00000442566.3:c.1494C>A
  hgvsp: ENST00000442566.3:c.1494C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148541
  ensembl transcript: ENST00000489341
  gene symbol: FAM13C
  hgvsc: ENST00000489341.1:n.336C>A
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000392302
  ensembl transcript: ENST00000435852
  gene symbol: FAM13C
  hgvsc: ENST00000435852.2:c.1431C>A
  hgvsp: ENST00000435852.2:c.1431C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19371
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4565
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20003
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1358
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16850
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1016
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2164
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 952
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10143
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Thr477Thr
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum

10-61012666-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61012666
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 61012666
    reference: chr 10
allele count: 1
allele frequency: 8.238182327451271e-6
allele num: 121386
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148541
  ensembl transcript: ENST00000489341
  gene symbol: FAM13C
  hgvsc: ENST00000489341.1:n.330C>T
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000424249
  ensembl transcript: ENST00000513059
  gene symbol: FAM13C
  hgvsc: ENST00000513059.1:c.*1354C>T
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000392302
  ensembl transcript: ENST00000435852
  gene symbol: FAM13C
  hgvsc: ENST00000435852.2:c.1425C>T
  hgvsp: ENST00000435852.2:c.1425C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000423896
  ensembl transcript: ENST00000468840
  gene symbol: FAM13C
  hgvsc: ENST00000468840.2:c.1176C>T
  hgvsp: ENST00000468840.2:c.1176C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000277705
  ensembl transcript: ENST00000277705
  gene symbol: FAM13C
  hgvsc: ENST00000277705.6:c.1485C>T
  hgvsp: ENST00000277705.6:c.1485C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000395661
  ensembl transcript: ENST00000442566
  gene symbol: FAM13C
  hgvsc: ENST00000442566.3:c.1488C>T
  hgvsp: ENST00000442566.3:c.1488C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362975
  ensembl transcript: ENST00000373868
  gene symbol: FAM13C
  hgvsc: ENST00000373868.2:c.1425C>T
  hgvsp: ENST00000373868.2:c.1425C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000391993
  ensembl transcript: ENST00000419214
  gene symbol: FAM13C
  hgvsc: ENST00000419214.2:c.1131C>T
  hgvsp: ENST00000419214.2:c.1131C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362974
  ensembl transcript: ENST00000373867
  gene symbol: FAM13C
  hgvsc: ENST00000373867.3:c.1173C>T
  hgvsp: ENST00000373867.3:c.1173C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19371
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10144
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1359
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16848
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20005
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1017
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4566
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2166
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 3.75e1
  variant carriers: 0
hgvs: p.His475His
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum

10-61012669-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61012669
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 61012669
    reference: chr 10
allele count: 1
allele frequency: 8.237775141689733e-6
allele num: 121392
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000392302
  ensembl transcript: ENST00000435852
  gene symbol: FAM13C
  hgvsc: ENST00000435852.2:c.1422C>T
  hgvsp: ENST00000435852.2:c.1422C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000395661
  ensembl transcript: ENST00000442566
  gene symbol: FAM13C
  hgvsc: ENST00000442566.3:c.1485C>T
  hgvsp: ENST00000442566.3:c.1485C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000391993
  ensembl transcript: ENST00000419214
  gene symbol: FAM13C
  hgvsc: ENST00000419214.2:c.1128C>T
  hgvsp: ENST00000419214.2:c.1128C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362975
  ensembl transcript: ENST00000373868
  gene symbol: FAM13C
  hgvsc: ENST00000373868.2:c.1422C>T
  hgvsp: ENST00000373868.2:c.1422C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000424249
  ensembl transcript: ENST00000513059
  gene symbol: FAM13C
  hgvsc: ENST00000513059.1:c.*1351C>T
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000423896
  ensembl transcript: ENST00000468840
  gene symbol: FAM13C
  hgvsc: ENST00000468840.2:c.1173C>T
  hgvsp: ENST00000468840.2:c.1173C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362974
  ensembl transcript: ENST00000373867
  gene symbol: FAM13C
  hgvsc: ENST00000373867.3:c.1170C>T
  hgvsp: ENST00000373867.3:c.1170C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148541
  ensembl transcript: ENST00000489341
  gene symbol: FAM13C
  hgvsc: ENST00000489341.1:n.327C>T
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000277705
  ensembl transcript: ENST00000277705
  gene symbol: FAM13C
  hgvsc: ENST00000277705.6:c.1482C>T
  hgvsp: ENST00000277705.6:c.1482C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19371
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20005
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4565
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1357
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16851
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2167
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10143
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1017
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 953
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2214
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Asp474Asp
num of homozygotes: 0
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: Other
reference allele: G
site quality: DP
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

http://identifiers.org/exac.variant/10-61012673-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61012673
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 61012673
    reference: chr 10
allele count: 6
allele frequency: 4.942990838990312e-5
allele num: 121384
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000424249
  ensembl transcript: ENST00000513059
  gene symbol: FAM13C
  hgvsc: ENST00000513059.1:c.*1347G>T
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362975
  ensembl transcript: ENST00000373868
  gene symbol: FAM13C
  hgvsc: ENST00000373868.2:c.1418G>T
  hgvsp: ENSP00000362975.2:p.Gly473Val
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000277705
  ensembl transcript: ENST00000277705
  gene symbol: FAM13C
  hgvsc: ENST00000277705.6:c.1478G>T
  hgvsp: ENSP00000277705.6:p.Gly493Val
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000392302
  ensembl transcript: ENST00000435852
  gene symbol: FAM13C
  hgvsc: ENST00000435852.2:c.1418G>T
  hgvsp: ENSP00000392302.2:p.Gly473Val
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000391993
  ensembl transcript: ENST00000419214
  gene symbol: FAM13C
  hgvsc: ENST00000419214.2:c.1124G>T
  hgvsp: ENSP00000391993.2:p.Gly375Val
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000423896
  ensembl transcript: ENST00000468840
  gene symbol: FAM13C
  hgvsc: ENST00000468840.2:c.1169G>T
  hgvsp: ENSP00000423896.1:p.Gly390Val
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362974
  ensembl transcript: ENST00000373867
  gene symbol: FAM13C
  hgvsc: ENST00000373867.3:c.1166G>T
  hgvsp: ENSP00000362974.3:p.Gly389Val
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000395661
  ensembl transcript: ENST00000442566
  gene symbol: FAM13C
  hgvsc: ENST00000442566.3:c.1481G>T
  hgvsp: ENSP00000395661.3:p.Gly494Val
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148541
  ensembl transcript: ENST00000489341
  gene symbol: FAM13C
  hgvsc: ENST00000489341.1:n.323G>T
  variant of: http://identifiers.org/hgnc/19371
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 953
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1022
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1358
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2167
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4565
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16852
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19999
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10141
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10075
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Gly473Val
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: East Asian
population: South Asian
reference allele: C
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/10-61012681-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61012681
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 61012681
    reference: chr 10
allele count: 3
allele frequency: 2.471291826614165e-5
allele num: 121394
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362975
  ensembl transcript: ENST00000373868
  gene symbol: FAM13C
  hgvsc: ENST00000373868.2:c.1410T>G
  hgvsp: ENST00000373868.2:c.1410T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000391993
  ensembl transcript: ENST00000419214
  gene symbol: FAM13C
  hgvsc: ENST00000419214.2:c.1116T>G
  hgvsp: ENST00000419214.2:c.1116T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000395661
  ensembl transcript: ENST00000442566
  gene symbol: FAM13C
  hgvsc: ENST00000442566.3:c.1473T>G
  hgvsp: ENST00000442566.3:c.1473T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000424249
  ensembl transcript: ENST00000513059
  gene symbol: FAM13C
  hgvsc: ENST00000513059.1:c.*1339T>G
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000392302
  ensembl transcript: ENST00000435852
  gene symbol: FAM13C
  hgvsc: ENST00000435852.2:c.1410T>G
  hgvsp: ENST00000435852.2:c.1410T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362974
  ensembl transcript: ENST00000373867
  gene symbol: FAM13C
  hgvsc: ENST00000373867.3:c.1158T>G
  hgvsp: ENST00000373867.3:c.1158T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148541
  ensembl transcript: ENST00000489341
  gene symbol: FAM13C
  hgvsc: ENST00000489341.1:n.315T>G
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000277705
  ensembl transcript: ENST00000277705
  gene symbol: FAM13C
  hgvsc: ENST00000277705.6:c.1470T>G
  hgvsp: ENST00000277705.6:c.1470T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000423896
  ensembl transcript: ENST00000468840
  gene symbol: FAM13C
  hgvsc: ENST00000468840.2:c.1161T>G
  hgvsp: ENST00000468840.2:c.1161T>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19371
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4567
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10140
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 953
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2167
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19994
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 315
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16864
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1017
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1358
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Leu470Leu
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: A
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum

10-61012688-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61012688
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 61012688
    reference: chr 10
allele count: 5
allele frequency: 4.118819711023609e-5
allele num: 121394
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000392302
  ensembl transcript: ENST00000435852
  gene symbol: FAM13C
  hgvsc: ENST00000435852.2:c.1403C>T
  hgvsp: ENSP00000392302.2:p.Ser468Phe
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362974
  ensembl transcript: ENST00000373867
  gene symbol: FAM13C
  hgvsc: ENST00000373867.3:c.1151C>T
  hgvsp: ENSP00000362974.3:p.Ser384Phe
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362975
  ensembl transcript: ENST00000373868
  gene symbol: FAM13C
  hgvsc: ENST00000373868.2:c.1403C>T
  hgvsp: ENSP00000362975.2:p.Ser468Phe
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000423896
  ensembl transcript: ENST00000468840
  gene symbol: FAM13C
  hgvsc: ENST00000468840.2:c.1154C>T
  hgvsp: ENSP00000423896.1:p.Ser385Phe
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000277705
  ensembl transcript: ENST00000277705
  gene symbol: FAM13C
  hgvsc: ENST00000277705.6:c.1463C>T
  hgvsp: ENSP00000277705.6:p.Ser488Phe
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000395661
  ensembl transcript: ENST00000442566
  gene symbol: FAM13C
  hgvsc: ENST00000442566.3:c.1466C>T
  hgvsp: ENSP00000395661.3:p.Ser489Phe
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148541
  ensembl transcript: ENST00000489341
  gene symbol: FAM13C
  hgvsc: ENST00000489341.1:n.308C>T
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000391993
  ensembl transcript: ENST00000419214
  gene symbol: FAM13C
  hgvsc: ENST00000419214.2:c.1109C>T
  hgvsp: ENSP00000391993.2:p.Ser370Phe
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000424249
  ensembl transcript: ENST00000513059
  gene symbol: FAM13C
  hgvsc: ENST00000513059.1:c.*1332C>T
  variant of: http://identifiers.org/hgnc/19371
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10139
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 501
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2166
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16861
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4568
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1020
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 953
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19996
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1356
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ser468Phe
num of homozygotes: 0
population: Other
population: South Asian
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD

10-61012691-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61012691
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 61012691
    reference: chr 10
allele count: 1
allele frequency: 8.237639422047218e-6
allele num: 121394
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000391993
  ensembl transcript: ENST00000419214
  gene symbol: FAM13C
  hgvsc: ENST00000419214.2:c.1106C>T
  hgvsp: ENSP00000391993.2:p.Ala369Val
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362975
  ensembl transcript: ENST00000373868
  gene symbol: FAM13C
  hgvsc: ENST00000373868.2:c.1400C>T
  hgvsp: ENSP00000362975.2:p.Ala467Val
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000277705
  ensembl transcript: ENST00000277705
  gene symbol: FAM13C
  hgvsc: ENST00000277705.6:c.1460C>T
  hgvsp: ENSP00000277705.6:p.Ala487Val
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362974
  ensembl transcript: ENST00000373867
  gene symbol: FAM13C
  hgvsc: ENST00000373867.3:c.1148C>T
  hgvsp: ENSP00000362974.3:p.Ala383Val
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000424249
  ensembl transcript: ENST00000513059
  gene symbol: FAM13C
  hgvsc: ENST00000513059.1:c.*1329C>T
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000392302
  ensembl transcript: ENST00000435852
  gene symbol: FAM13C
  hgvsc: ENST00000435852.2:c.1400C>T
  hgvsp: ENSP00000392302.2:p.Ala467Val
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000423896
  ensembl transcript: ENST00000468840
  gene symbol: FAM13C
  hgvsc: ENST00000468840.2:c.1151C>T
  hgvsp: ENSP00000423896.1:p.Ala384Val
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148541
  ensembl transcript: ENST00000489341
  gene symbol: FAM13C
  hgvsc: ENST00000489341.1:n.305C>T
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000395661
  ensembl transcript: ENST00000442566
  gene symbol: FAM13C
  hgvsc: ENST00000442566.3:c.1463C>T
  hgvsp: ENSP00000395661.3:p.Ala488Val
  variant of: http://identifiers.org/hgnc/19371
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 952
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10140
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4570
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19997
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 339
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1357
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16863
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2168
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1017
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3418
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3495
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ala467Val
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum

10-61012696-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61012696
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 61012696
    reference: chr 10
allele count: 1
allele frequency: 8.237503706876667e-6
allele num: 121396
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362975
  ensembl transcript: ENST00000373868
  gene symbol: FAM13C
  hgvsc: ENST00000373868.2:c.1395T>C
  hgvsp: ENST00000373868.2:c.1395T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000391993
  ensembl transcript: ENST00000419214
  gene symbol: FAM13C
  hgvsc: ENST00000419214.2:c.1101T>C
  hgvsp: ENST00000419214.2:c.1101T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000277705
  ensembl transcript: ENST00000277705
  gene symbol: FAM13C
  hgvsc: ENST00000277705.6:c.1455T>C
  hgvsp: ENST00000277705.6:c.1455T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000395661
  ensembl transcript: ENST00000442566
  gene symbol: FAM13C
  hgvsc: ENST00000442566.3:c.1458T>C
  hgvsp: ENST00000442566.3:c.1458T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000423896
  ensembl transcript: ENST00000468840
  gene symbol: FAM13C
  hgvsc: ENST00000468840.2:c.1146T>C
  hgvsp: ENST00000468840.2:c.1146T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000392302
  ensembl transcript: ENST00000435852
  gene symbol: FAM13C
  hgvsc: ENST00000435852.2:c.1395T>C
  hgvsp: ENST00000435852.2:c.1395T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000424249
  ensembl transcript: ENST00000513059
  gene symbol: FAM13C
  hgvsc: ENST00000513059.1:c.*1324T>C
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362974
  ensembl transcript: ENST00000373867
  gene symbol: FAM13C
  hgvsc: ENST00000373867.3:c.1143T>C
  hgvsp: ENST00000373867.3:c.1143T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148541
  ensembl transcript: ENST00000489341
  gene symbol: FAM13C
  hgvsc: ENST00000489341.1:n.300T>C
  variant of: http://identifiers.org/hgnc/19371
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20001
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1017
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4567
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1356
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2169
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16863
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10142
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 952
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1590
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3494
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Asp465Asp
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
population: Latino
population: Other
population: African
reference allele: A
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum

http://identifiers.org/exac.variant/10-61012698-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61012698
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 61012698
    reference: chr 10
allele count: 1
allele frequency: 8.237367996177861e-6
allele num: 121398
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362974
  ensembl transcript: ENST00000373867
  gene symbol: FAM13C
  hgvsc: ENST00000373867.3:c.1141G>T
  hgvsp: ENSP00000362974.3:p.Asp381Tyr
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000423896
  ensembl transcript: ENST00000468840
  gene symbol: FAM13C
  hgvsc: ENST00000468840.2:c.1144G>T
  hgvsp: ENSP00000423896.1:p.Asp382Tyr
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000424249
  ensembl transcript: ENST00000513059
  gene symbol: FAM13C
  hgvsc: ENST00000513059.1:c.*1322G>T
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362975
  ensembl transcript: ENST00000373868
  gene symbol: FAM13C
  hgvsc: ENST00000373868.2:c.1393G>T
  hgvsp: ENSP00000362975.2:p.Asp465Tyr
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148541
  ensembl transcript: ENST00000489341
  gene symbol: FAM13C
  hgvsc: ENST00000489341.1:n.298G>T
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000391993
  ensembl transcript: ENST00000419214
  gene symbol: FAM13C
  hgvsc: ENST00000419214.2:c.1099G>T
  hgvsp: ENSP00000391993.2:p.Asp367Tyr
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000392302
  ensembl transcript: ENST00000435852
  gene symbol: FAM13C
  hgvsc: ENST00000435852.2:c.1393G>T
  hgvsp: ENSP00000392302.2:p.Asp465Tyr
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000395661
  ensembl transcript: ENST00000442566
  gene symbol: FAM13C
  hgvsc: ENST00000442566.3:c.1456G>T
  hgvsp: ENSP00000395661.3:p.Asp486Tyr
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000277705
  ensembl transcript: ENST00000277705
  gene symbol: FAM13C
  hgvsc: ENST00000277705.6:c.1453G>T
  hgvsp: ENSP00000277705.6:p.Asp485Tyr
  variant of: http://identifiers.org/hgnc/19371
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4566
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19999
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1357
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16863
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10145
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2169
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1017
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Asp465Tyr
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: BaseQRankSum

10-61012700-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61012700
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 61012700
    reference: chr 10
allele count: 1
allele frequency: 8.237367996177861e-6
allele num: 121398
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000277705
  ensembl transcript: ENST00000277705
  gene symbol: FAM13C
  hgvsc: ENST00000277705.6:c.1451C>A
  hgvsp: ENSP00000277705.6:p.Ala484Glu
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148541
  ensembl transcript: ENST00000489341
  gene symbol: FAM13C
  hgvsc: ENST00000489341.1:n.296C>A
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000391993
  ensembl transcript: ENST00000419214
  gene symbol: FAM13C
  hgvsc: ENST00000419214.2:c.1097C>A
  hgvsp: ENSP00000391993.2:p.Ala366Glu
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000395661
  ensembl transcript: ENST00000442566
  gene symbol: FAM13C
  hgvsc: ENST00000442566.3:c.1454C>A
  hgvsp: ENSP00000395661.3:p.Ala485Glu
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000423896
  ensembl transcript: ENST00000468840
  gene symbol: FAM13C
  hgvsc: ENST00000468840.2:c.1142C>A
  hgvsp: ENSP00000423896.1:p.Ala381Glu
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000424249
  ensembl transcript: ENST00000513059
  gene symbol: FAM13C
  hgvsc: ENST00000513059.1:c.*1320C>A
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362974
  ensembl transcript: ENST00000373867
  gene symbol: FAM13C
  hgvsc: ENST00000373867.3:c.1139C>A
  hgvsp: ENSP00000362974.3:p.Ala380Glu
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000392302
  ensembl transcript: ENST00000435852
  gene symbol: FAM13C
  hgvsc: ENST00000435852.2:c.1391C>A
  hgvsp: ENSP00000392302.2:p.Ala464Glu
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362975
  ensembl transcript: ENST00000373868
  gene symbol: FAM13C
  hgvsc: ENST00000373868.2:c.1391C>A
  hgvsp: ENSP00000362975.2:p.Ala464Glu
  variant of: http://identifiers.org/hgnc/19371
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4565
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10145
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19995
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16867
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1357
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2170
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1016
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8382
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10067
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ala464Glu
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: QD

10-61012726-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61012726
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 61012726
    reference: chr 10
allele count: 1
allele frequency: 8.237503706876667e-6
allele num: 121396
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000395661
  ensembl transcript: ENST00000442566
  gene symbol: FAM13C
  hgvsc: ENST00000442566.3:c.1428A>G
  hgvsp: ENST00000442566.3:c.1428A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000391993
  ensembl transcript: ENST00000419214
  gene symbol: FAM13C
  hgvsc: ENST00000419214.2:c.1071A>G
  hgvsp: ENST00000419214.2:c.1071A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362974
  ensembl transcript: ENST00000373867
  gene symbol: FAM13C
  hgvsc: ENST00000373867.3:c.1113A>G
  hgvsp: ENST00000373867.3:c.1113A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362975
  ensembl transcript: ENST00000373868
  gene symbol: FAM13C
  hgvsc: ENST00000373868.2:c.1365A>G
  hgvsp: ENST00000373868.2:c.1365A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000424249
  ensembl transcript: ENST00000513059
  gene symbol: FAM13C
  hgvsc: ENST00000513059.1:c.*1294A>G
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000392302
  ensembl transcript: ENST00000435852
  gene symbol: FAM13C
  hgvsc: ENST00000435852.2:c.1365A>G
  hgvsp: ENST00000435852.2:c.1365A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000277705
  ensembl transcript: ENST00000277705
  gene symbol: FAM13C
  hgvsc: ENST00000277705.6:c.1425A>G
  hgvsp: ENST00000277705.6:c.1425A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000423896
  ensembl transcript: ENST00000468840
  gene symbol: FAM13C
  hgvsc: ENST00000468840.2:c.1116A>G
  hgvsp: ENST00000468840.2:c.1116A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148541
  ensembl transcript: ENST00000489341
  gene symbol: FAM13C
  hgvsc: ENST00000489341.1:n.270A>G
  variant of: http://identifiers.org/hgnc/19371
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16870
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1017
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10142
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2168
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4568
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19986
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1356
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 952
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2212
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Pro455Pro
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: FS

10-61012730-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61012730
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 61012730
    reference: chr 10
allele count: 13
allele frequency: 1.070928412554576e-4
allele num: 121390
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000423896
  ensembl transcript: ENST00000468840
  gene symbol: FAM13C
  hgvsc: ENST00000468840.2:c.1112G>A
  hgvsp: ENSP00000423896.1:p.Arg371His
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362974
  ensembl transcript: ENST00000373867
  gene symbol: FAM13C
  hgvsc: ENST00000373867.3:c.1109G>A
  hgvsp: ENSP00000362974.3:p.Arg370His
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000391993
  ensembl transcript: ENST00000419214
  gene symbol: FAM13C
  hgvsc: ENST00000419214.2:c.1067G>A
  hgvsp: ENSP00000391993.2:p.Arg356His
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148541
  ensembl transcript: ENST00000489341
  gene symbol: FAM13C
  hgvsc: ENST00000489341.1:n.266G>A
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000277705
  ensembl transcript: ENST00000277705
  gene symbol: FAM13C
  hgvsc: ENST00000277705.6:c.1421G>A
  hgvsp: ENSP00000277705.6:p.Arg474His
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000392302
  ensembl transcript: ENST00000435852
  gene symbol: FAM13C
  hgvsc: ENST00000435852.2:c.1361G>A
  hgvsp: ENSP00000392302.2:p.Arg454His
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000395661
  ensembl transcript: ENST00000442566
  gene symbol: FAM13C
  hgvsc: ENST00000442566.3:c.1424G>A
  hgvsp: ENSP00000395661.3:p.Arg475His
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000424249
  ensembl transcript: ENST00000513059
  gene symbol: FAM13C
  hgvsc: ENST00000513059.1:c.*1290G>A
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362975
  ensembl transcript: ENST00000373868
  gene symbol: FAM13C
  hgvsc: ENST00000373868.2:c.1361G>A
  hgvsp: ENSP00000362975.2:p.Arg454His
  variant of: http://identifiers.org/hgnc/19371
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 220
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2166
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1357
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10140
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16869
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 314
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 953
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19975
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1022
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 4568
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3412
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Arg454His
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: Other
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: QD

10-61012731-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61012731
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 61012731
    reference: chr 10
allele count: 6
allele frequency: 4.942827956634923e-5
allele num: 121388
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362974
  ensembl transcript: ENST00000373867
  gene symbol: FAM13C
  hgvsc: ENST00000373867.3:c.1108C>T
  hgvsp: ENSP00000362974.3:p.Arg370Cys
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148541
  ensembl transcript: ENST00000489341
  gene symbol: FAM13C
  hgvsc: ENST00000489341.1:n.265C>T
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000392302
  ensembl transcript: ENST00000435852
  gene symbol: FAM13C
  hgvsc: ENST00000435852.2:c.1360C>T
  hgvsp: ENSP00000392302.2:p.Arg454Cys
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362975
  ensembl transcript: ENST00000373868
  gene symbol: FAM13C
  hgvsc: ENST00000373868.2:c.1360C>T
  hgvsp: ENSP00000362975.2:p.Arg454Cys
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000391993
  ensembl transcript: ENST00000419214
  gene symbol: FAM13C
  hgvsc: ENST00000419214.2:c.1066C>T
  hgvsp: ENSP00000391993.2:p.Arg356Cys
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000423896
  ensembl transcript: ENST00000468840
  gene symbol: FAM13C
  hgvsc: ENST00000468840.2:c.1111C>T
  hgvsp: ENSP00000423896.1:p.Arg371Cys
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000277705
  ensembl transcript: ENST00000277705
  gene symbol: FAM13C
  hgvsc: ENST00000277705.6:c.1420C>T
  hgvsp: ENSP00000277705.6:p.Arg474Cys
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000395661
  ensembl transcript: ENST00000442566
  gene symbol: FAM13C
  hgvsc: ENST00000442566.3:c.1423C>T
  hgvsp: ENSP00000395661.3:p.Arg475Cys
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000424249
  ensembl transcript: ENST00000513059
  gene symbol: FAM13C
  hgvsc: ENST00000513059.1:c.*1289C>T
  variant of: http://identifiers.org/hgnc/19371
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2168
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1020
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19975
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1358
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16875
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4569
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10140
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3413
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Arg454Cys
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff

10-61012747-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61012747
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 61012747
    reference: chr 10
allele count: 1
allele frequency: 8.239947264337508e-6
allele num: 121360
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000423896
  ensembl transcript: ENST00000468840
  gene symbol: FAM13C
  hgvsc: ENST00000468840.2:c.1095G>A
  hgvsp: ENST00000468840.2:c.1095G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000391993
  ensembl transcript: ENST00000419214
  gene symbol: FAM13C
  hgvsc: ENST00000419214.2:c.1050G>A
  hgvsp: ENST00000419214.2:c.1050G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148541
  ensembl transcript: ENST00000489341
  gene symbol: FAM13C
  hgvsc: ENST00000489341.1:n.249G>A
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000277705
  ensembl transcript: ENST00000277705
  gene symbol: FAM13C
  hgvsc: ENST00000277705.6:c.1404G>A
  hgvsp: ENST00000277705.6:c.1404G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000395661
  ensembl transcript: ENST00000442566
  gene symbol: FAM13C
  hgvsc: ENST00000442566.3:c.1407G>A
  hgvsp: ENST00000442566.3:c.1407G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362974
  ensembl transcript: ENST00000373867
  gene symbol: FAM13C
  hgvsc: ENST00000373867.3:c.1092G>A
  hgvsp: ENST00000373867.3:c.1092G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000392302
  ensembl transcript: ENST00000435852
  gene symbol: FAM13C
  hgvsc: ENST00000435852.2:c.1344G>A
  hgvsp: ENST00000435852.2:c.1344G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362975
  ensembl transcript: ENST00000373868
  gene symbol: FAM13C
  hgvsc: ENST00000373868.2:c.1344G>A
  hgvsp: ENST00000373868.2:c.1344G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000424249
  ensembl transcript: ENST00000513059
  gene symbol: FAM13C
  hgvsc: ENST00000513059.1:c.*1273G>A
  variant of: http://identifiers.org/hgnc/19371
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10140
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1359
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19944
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1018
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16876
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2168
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4567
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Glu448Glu
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum

10-61012760-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61012760
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 61012760
    reference: chr 10
allele count: 1
allele frequency: 8.241169586787756e-6
allele num: 121342
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000391993
  ensembl transcript: ENST00000419214
  gene symbol: FAM13C
  hgvsc: ENST00000419214.2:c.1039-2A>T
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000277705
  ensembl transcript: ENST00000277705
  gene symbol: FAM13C
  hgvsc: ENST00000277705.6:c.1396-5A>T
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000392302
  ensembl transcript: ENST00000435852
  gene symbol: FAM13C
  hgvsc: ENST00000435852.2:c.1333-2A>T
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000148541
  ensembl transcript: ENST00000489341
  gene symbol: FAM13C
  hgvsc: ENST00000489341.1:n.238-2A>T
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000395661
  ensembl transcript: ENST00000442566
  gene symbol: FAM13C
  hgvsc: ENST00000442566.3:c.1396-2A>T
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000424249
  ensembl transcript: ENST00000513059
  gene symbol: FAM13C
  hgvsc: ENST00000513059.1:c.*1265-5A>T
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: true
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362975
  ensembl transcript: ENST00000373868
  gene symbol: FAM13C
  hgvsc: ENST00000373868.2:c.1333-2A>T
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: splice_acceptor_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000423896
  ensembl transcript: ENST00000468840
  gene symbol: FAM13C
  hgvsc: ENST00000468840.2:c.1084-2A>T
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362974
  ensembl transcript: ENST00000373867
  gene symbol: FAM13C
  hgvsc: ENST00000373867.3:c.1084-5A>T
  variant of: http://identifiers.org/hgnc/19371
canonical: true
consequence: splice acceptor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16880
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2165
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4567
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 952
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1017
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1357
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10129
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19892
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 4.25e1
  variant carriers: 0
hgvs: c.1333-2A>T
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: East Asian
population: Other
reference allele: T
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP

http://identifiers.org/exac.variant/10-61012770-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61012770
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 61012770
    reference: chr 10
allele count: 1
allele frequency: 8.245654540057389e-6
allele num: 121276
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362974
  ensembl transcript: ENST00000373867
  gene symbol: FAM13C
  hgvsc: ENST00000373867.3:c.1084-15G>T
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl transcript: ENST00000489341
  gene symbol: FAM13C
  hgvsc: ENST00000489341.1:n.238-12G>T
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000424249
  ensembl transcript: ENST00000513059
  gene symbol: FAM13C
  hgvsc: ENST00000513059.1:c.*1265-15G>T
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000423896
  ensembl transcript: ENST00000468840
  gene symbol: FAM13C
  hgvsc: ENST00000468840.2:c.1084-12G>T
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000277705
  ensembl transcript: ENST00000277705
  gene symbol: FAM13C
  hgvsc: ENST00000277705.6:c.1396-15G>T
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000395661
  ensembl transcript: ENST00000442566
  gene symbol: FAM13C
  hgvsc: ENST00000442566.3:c.1396-12G>T
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362975
  ensembl transcript: ENST00000373868
  gene symbol: FAM13C
  hgvsc: ENST00000373868.2:c.1333-12G>T
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000391993
  ensembl transcript: ENST00000419214
  gene symbol: FAM13C
  hgvsc: ENST00000419214.2:c.1039-12G>T
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000392302
  ensembl transcript: ENST00000435852
  gene symbol: FAM13C
  hgvsc: ENST00000435852.2:c.1333-12G>T
  variant of: http://identifiers.org/hgnc/19371
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2166
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1357
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4564
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19736
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10123
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16823
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1017
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26442
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4752
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
population: European (Finnish)
reference allele: C
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum

10-61012776-TAAAG-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61012776
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 61012772
    reference: chr 10
allele count: 2
allele frequency: 1.649838315845047e-5
allele num: 121224
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362974
  ensembl transcript: ENST00000373867
  gene symbol: FAM13C
  hgvsc: ENST00000373867.3:c.1084-25_1084-22delCTTT
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl transcript: ENST00000489341
  gene symbol: FAM13C
  hgvsc: ENST00000489341.1:n.238-22_238-19delCTTT
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000424249
  ensembl transcript: ENST00000513059
  gene symbol: FAM13C
  hgvsc: ENST00000513059.1:c.*1265-25_*1265-22delCTTT
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000277705
  ensembl transcript: ENST00000277705
  gene symbol: FAM13C
  hgvsc: ENST00000277705.6:c.1396-25_1396-22delCTTT
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000392302
  ensembl transcript: ENST00000435852
  gene symbol: FAM13C
  hgvsc: ENST00000435852.2:c.1333-22_1333-19delCTTT
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000391993
  ensembl transcript: ENST00000419214
  gene symbol: FAM13C
  hgvsc: ENST00000419214.2:c.1039-22_1039-19delCTTT
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000423896
  ensembl transcript: ENST00000468840
  gene symbol: FAM13C
  hgvsc: ENST00000468840.2:c.1084-22_1084-19delCTTT
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000395661
  ensembl transcript: ENST00000442566
  gene symbol: FAM13C
  hgvsc: ENST00000442566.3:c.1396-22_1396-19delCTTT
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362975
  ensembl transcript: ENST00000373868
  gene symbol: FAM13C
  hgvsc: ENST00000373868.2:c.1333-22_1333-19delCTTT
  variant of: http://identifiers.org/hgnc/19371
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10096
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19578
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2167
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1358
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16746
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4567
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1017
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26198
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: TAAAG
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: MQ
site quality: MQRankSum

10-61012780-GA-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61012780
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 61012779
    reference: chr 10
allele count: 2
allele frequency: 1.650382888830209e-5
allele num: 121184
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000277705
  ensembl transcript: ENST00000277705
  gene symbol: FAM13C
  hgvsc: ENST00000277705.6:c.1396-26delT
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362974
  ensembl transcript: ENST00000373867
  gene symbol: FAM13C
  hgvsc: ENST00000373867.3:c.1084-26delT
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000423896
  ensembl transcript: ENST00000468840
  gene symbol: FAM13C
  hgvsc: ENST00000468840.2:c.1084-23delT
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000391993
  ensembl transcript: ENST00000419214
  gene symbol: FAM13C
  hgvsc: ENST00000419214.2:c.1039-23delT
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362975
  ensembl transcript: ENST00000373868
  gene symbol: FAM13C
  hgvsc: ENST00000373868.2:c.1333-23delT
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000395661
  ensembl transcript: ENST00000442566
  gene symbol: FAM13C
  hgvsc: ENST00000442566.3:c.1396-23delT
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl transcript: ENST00000489341
  gene symbol: FAM13C
  hgvsc: ENST00000489341.1:n.238-23delT
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000392302
  ensembl transcript: ENST00000435852
  gene symbol: FAM13C
  hgvsc: ENST00000435852.2:c.1333-23delT
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000424249
  ensembl transcript: ENST00000513059
  gene symbol: FAM13C
  hgvsc: ENST00000513059.1:c.*1265-26delT
  variant of: http://identifiers.org/hgnc/19371
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1358
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16695
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2168
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19437
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10085
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 480
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4560
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1018
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 952
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 389
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8278
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
reference allele: GA
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum

10-61012784-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61012784
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 61012784
    reference: chr 10
allele count: 1
allele frequency: 8.254230293025175e-6
allele num: 121150
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000423896
  ensembl transcript: ENST00000468840
  gene symbol: FAM13C
  hgvsc: ENST00000468840.2:c.1084-26C>A
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000391993
  ensembl transcript: ENST00000419214
  gene symbol: FAM13C
  hgvsc: ENST00000419214.2:c.1039-26C>A
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl transcript: ENST00000489341
  gene symbol: FAM13C
  hgvsc: ENST00000489341.1:n.238-26C>A
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000395661
  ensembl transcript: ENST00000442566
  gene symbol: FAM13C
  hgvsc: ENST00000442566.3:c.1396-26C>A
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000277705
  ensembl transcript: ENST00000277705
  gene symbol: FAM13C
  hgvsc: ENST00000277705.6:c.1396-29C>A
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362975
  ensembl transcript: ENST00000373868
  gene symbol: FAM13C
  hgvsc: ENST00000373868.2:c.1333-26C>A
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000424249
  ensembl transcript: ENST00000513059
  gene symbol: FAM13C
  hgvsc: ENST00000513059.1:c.*1265-29C>A
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362974
  ensembl transcript: ENST00000373867
  gene symbol: FAM13C
  hgvsc: ENST00000373867.3:c.1084-29C>A
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000392302
  ensembl transcript: ENST00000435852
  gene symbol: FAM13C
  hgvsc: ENST00000435852.2:c.1333-26C>A
  variant of: http://identifiers.org/hgnc/19371
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19084
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1357
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 950
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10075
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 711
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4558
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 458
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16598
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1019
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2165
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 274
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 533
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP

10-61012785-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61012785
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 61012785
    reference: chr 10
allele count: 1
allele frequency: 8.255184255712587e-6
allele num: 121136
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000391993
  ensembl transcript: ENST00000419214
  gene symbol: FAM13C
  hgvsc: ENST00000419214.2:c.1039-27T>A
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000277705
  ensembl transcript: ENST00000277705
  gene symbol: FAM13C
  hgvsc: ENST00000277705.6:c.1396-30T>A
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000395661
  ensembl transcript: ENST00000442566
  gene symbol: FAM13C
  hgvsc: ENST00000442566.3:c.1396-27T>A
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362975
  ensembl transcript: ENST00000373868
  gene symbol: FAM13C
  hgvsc: ENST00000373868.2:c.1333-27T>A
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000424249
  ensembl transcript: ENST00000513059
  gene symbol: FAM13C
  hgvsc: ENST00000513059.1:c.*1265-30T>A
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000423896
  ensembl transcript: ENST00000468840
  gene symbol: FAM13C
  hgvsc: ENST00000468840.2:c.1084-27T>A
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362974
  ensembl transcript: ENST00000373867
  gene symbol: FAM13C
  hgvsc: ENST00000373867.3:c.1084-30T>A
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl transcript: ENST00000489341
  gene symbol: FAM13C
  hgvsc: ENST00000489341.1:n.238-27T>A
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000392302
  ensembl transcript: ENST00000435852
  gene symbol: FAM13C
  hgvsc: ENST00000435852.2:c.1333-27T>A
  variant of: http://identifiers.org/hgnc/19371
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 16514
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 111
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 873
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1357
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4556
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2164
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18746
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10078
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1019
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4741
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25004
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 251
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10064
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: African
population: South Asian
reference allele: A
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: DP

http://identifiers.org/exac.variant/10-61012786-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61012786
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 61012786
    reference: chr 10
allele count: 1
allele frequency: 8.254639107178234e-6
allele num: 121144
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000277705
  ensembl transcript: ENST00000277705
  gene symbol: FAM13C
  hgvsc: ENST00000277705.6:c.1396-31T>G
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000391993
  ensembl transcript: ENST00000419214
  gene symbol: FAM13C
  hgvsc: ENST00000419214.2:c.1039-28T>G
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000395661
  ensembl transcript: ENST00000442566
  gene symbol: FAM13C
  hgvsc: ENST00000442566.3:c.1396-28T>G
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362974
  ensembl transcript: ENST00000373867
  gene symbol: FAM13C
  hgvsc: ENST00000373867.3:c.1084-31T>G
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000424249
  ensembl transcript: ENST00000513059
  gene symbol: FAM13C
  hgvsc: ENST00000513059.1:c.*1265-31T>G
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000392302
  ensembl transcript: ENST00000435852
  gene symbol: FAM13C
  hgvsc: ENST00000435852.2:c.1333-28T>G
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl transcript: ENST00000489341
  gene symbol: FAM13C
  hgvsc: ENST00000489341.1:n.238-28T>G
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000423896
  ensembl transcript: ENST00000468840
  gene symbol: FAM13C
  hgvsc: ENST00000468840.2:c.1084-28T>G
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362975
  ensembl transcript: ENST00000373868
  gene symbol: FAM13C
  hgvsc: ENST00000373868.2:c.1333-28T>G
  variant of: http://identifiers.org/hgnc/19371
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18745
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16519
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1357
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4555
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 872
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2168
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1019
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10070
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 253
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 368
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3484
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4742
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: Latino
reference allele: A
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum

10-61012804-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61012804
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 61012804
    reference: chr 10
allele count: 1
allele frequency: 8.282670995742708e-6
allele num: 120734
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000424249
  ensembl transcript: ENST00000513059
  gene symbol: FAM13C
  hgvsc: ENST00000513059.1:c.*1265-49A>T
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000277705
  ensembl transcript: ENST00000277705
  gene symbol: FAM13C
  hgvsc: ENST00000277705.6:c.1396-49A>T
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000423896
  ensembl transcript: ENST00000468840
  gene symbol: FAM13C
  hgvsc: ENST00000468840.2:c.1084-46A>T
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl transcript: ENST00000489341
  gene symbol: FAM13C
  hgvsc: ENST00000489341.1:n.238-46A>T
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000392302
  ensembl transcript: ENST00000435852
  gene symbol: FAM13C
  hgvsc: ENST00000435852.2:c.1333-46A>T
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362975
  ensembl transcript: ENST00000373868
  gene symbol: FAM13C
  hgvsc: ENST00000373868.2:c.1333-46A>T
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000391993
  ensembl transcript: ENST00000419214
  gene symbol: FAM13C
  hgvsc: ENST00000419214.2:c.1039-46A>T
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362974
  ensembl transcript: ENST00000373867
  gene symbol: FAM13C
  hgvsc: ENST00000373867.3:c.1084-49A>T
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000395661
  ensembl transcript: ENST00000442566
  gene symbol: FAM13C
  hgvsc: ENST00000442566.3:c.1396-46A>T
  variant of: http://identifiers.org/hgnc/19371
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14790
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 553
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 499
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4468
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17740
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 948
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1355
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9514
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 341
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3587
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1269
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2142
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 312
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1018
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2004
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3259
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18154
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1353
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 921
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
reference allele: T
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum

10-61014016-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61014016
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 61014016
    reference: chr 10
allele count: 1
allele frequency: 9.046990066404907e-6
allele num: 110534
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000277705
  ensembl transcript: ENST00000277705
  gene symbol: FAM13C
  hgvsc: ENST00000277705.6:c.1395+92A>G
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000392302
  ensembl transcript: ENST00000435852
  gene symbol: FAM13C
  hgvsc: ENST00000435852.2:c.1332+92A>G
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362975
  ensembl transcript: ENST00000373868
  gene symbol: FAM13C
  hgvsc: ENST00000373868.2:c.1332+92A>G
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000423896
  ensembl transcript: ENST00000468840
  gene symbol: FAM13C
  hgvsc: ENST00000468840.2:c.1083+92A>G
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000424249
  ensembl transcript: ENST00000513059
  gene symbol: FAM13C
  hgvsc: ENST00000513059.1:c.*1264+92A>G
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000400241
  ensembl transcript: ENST00000422313
  gene symbol: FAM13C
  hgvsc: ENST00000422313.2:c.*47A>G
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362974
  ensembl transcript: ENST00000373867
  gene symbol: FAM13C
  hgvsc: ENST00000373867.3:c.1083+92A>G
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl transcript: ENST00000489341
  gene symbol: FAM13C
  hgvsc: ENST00000489341.1:n.237+92A>G
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000391993
  ensembl transcript: ENST00000419214
  gene symbol: FAM13C
  hgvsc: ENST00000419214.2:c.1038+92A>G
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000395661
  ensembl transcript: ENST00000442566
  gene symbol: FAM13C
  hgvsc: ENST00000442566.3:c.1395+92A>G
  variant of: http://identifiers.org/hgnc/19371
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4078
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7789
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11636
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10273
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2655
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 750
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4761
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1484
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4298
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 513
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 972
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1254
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5332
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2552
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 443
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15726
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1916
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: T
site quality: FS
site quality: MQ
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD

10-61014020-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61014020
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 61014020
    reference: chr 10
allele count: 1
allele frequency: 9.0561663436634e-6
allele num: 110422
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362974
  ensembl transcript: ENST00000373867
  gene symbol: FAM13C
  hgvsc: ENST00000373867.3:c.1083+88C>T
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000277705
  ensembl transcript: ENST00000277705
  gene symbol: FAM13C
  hgvsc: ENST00000277705.6:c.1395+88C>T
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000423896
  ensembl transcript: ENST00000468840
  gene symbol: FAM13C
  hgvsc: ENST00000468840.2:c.1083+88C>T
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000392302
  ensembl transcript: ENST00000435852
  gene symbol: FAM13C
  hgvsc: ENST00000435852.2:c.1332+88C>T
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000395661
  ensembl transcript: ENST00000442566
  gene symbol: FAM13C
  hgvsc: ENST00000442566.3:c.1395+88C>T
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000400241
  ensembl transcript: ENST00000422313
  gene symbol: FAM13C
  hgvsc: ENST00000422313.2:c.*43C>T
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000391993
  ensembl transcript: ENST00000419214
  gene symbol: FAM13C
  hgvsc: ENST00000419214.2:c.1038+88C>T
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl transcript: ENST00000489341
  gene symbol: FAM13C
  hgvsc: ENST00000489341.1:n.237+88C>T
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000424249
  ensembl transcript: ENST00000513059
  gene symbol: FAM13C
  hgvsc: ENST00000513059.1:c.*1264+88C>T
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362975
  ensembl transcript: ENST00000373868
  gene symbol: FAM13C
  hgvsc: ENST00000373868.2:c.1332+88C>T
  variant of: http://identifiers.org/hgnc/19371
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10546
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1179
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4047
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2565
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4105
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13565
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1488
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3092
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4798
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 970
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8057
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2654
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 585
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1745
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1106
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: South Asian
population: Other
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: DP

10-61014028-TATA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61014028
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 61014025
    reference: chr 10
allele count: 1
allele frequency: 9.015506671474937e-6
allele num: 110920
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000400241
  ensembl transcript: ENST00000422313
  gene symbol: FAM13C
  hgvsc: ENST00000422313.2:c.*32_*34delTAT
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362975
  ensembl transcript: ENST00000373868
  gene symbol: FAM13C
  hgvsc: ENST00000373868.2:c.1332+77_1332+79delTAT
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000277705
  ensembl transcript: ENST00000277705
  gene symbol: FAM13C
  hgvsc: ENST00000277705.6:c.1395+77_1395+79delTAT
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl transcript: ENST00000489341
  gene symbol: FAM13C
  hgvsc: ENST00000489341.1:n.237+77_237+79delTAT
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000392302
  ensembl transcript: ENST00000435852
  gene symbol: FAM13C
  hgvsc: ENST00000435852.2:c.1332+77_1332+79delTAT
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000423896
  ensembl transcript: ENST00000468840
  gene symbol: FAM13C
  hgvsc: ENST00000468840.2:c.1083+77_1083+79delTAT
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000391993
  ensembl transcript: ENST00000419214
  gene symbol: FAM13C
  hgvsc: ENST00000419214.2:c.1038+77_1038+79delTAT
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362974
  ensembl transcript: ENST00000373867
  gene symbol: FAM13C
  hgvsc: ENST00000373867.3:c.1083+77_1083+79delTAT
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000395661
  ensembl transcript: ENST00000442566
  gene symbol: FAM13C
  hgvsc: ENST00000442566.3:c.1395+77_1395+79delTAT
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000424249
  ensembl transcript: ENST00000513059
  gene symbol: FAM13C
  hgvsc: ENST00000513059.1:c.*1264+77_*1264+79delTAT
  variant of: http://identifiers.org/hgnc/19371
canonical: false
consequence: 3' UTR
filter: VQSRTrancheINDEL95.00to96.00
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1059
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 514
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 934
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4861
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3010
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1494
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2581
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4169
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8447
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11131
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 748
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 636
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15749
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 973
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2655
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2990
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 378
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 416
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
reference allele: TATA
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD

10-61014034-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61014034
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 61014034
    reference: chr 10
allele count: 1
allele frequency: 8.952872081363702e-6
allele num: 111696
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000400241
  ensembl transcript: ENST00000422313
  gene symbol: FAM13C
  hgvsc: ENST00000422313.2:c.*29A>G
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362974
  ensembl transcript: ENST00000373867
  gene symbol: FAM13C
  hgvsc: ENST00000373867.3:c.1083+74A>G
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000392302
  ensembl transcript: ENST00000435852
  gene symbol: FAM13C
  hgvsc: ENST00000435852.2:c.1332+74A>G
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000277705
  ensembl transcript: ENST00000277705
  gene symbol: FAM13C
  hgvsc: ENST00000277705.6:c.1395+74A>G
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000424249
  ensembl transcript: ENST00000513059
  gene symbol: FAM13C
  hgvsc: ENST00000513059.1:c.*1264+74A>G
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000395661
  ensembl transcript: ENST00000442566
  gene symbol: FAM13C
  hgvsc: ENST00000442566.3:c.1395+74A>G
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000423896
  ensembl transcript: ENST00000468840
  gene symbol: FAM13C
  hgvsc: ENST00000468840.2:c.1083+74A>G
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000391993
  ensembl transcript: ENST00000419214
  gene symbol: FAM13C
  hgvsc: ENST00000419214.2:c.1038+74A>G
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl transcript: ENST00000489341
  gene symbol: FAM13C
  hgvsc: ENST00000489341.1:n.237+74A>G
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362975
  ensembl transcript: ENST00000373868
  gene symbol: FAM13C
  hgvsc: ENST00000373868.2:c.1332+74A>G
  variant of: http://identifiers.org/hgnc/19371
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11427
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4074
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2072
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1498
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8676
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2598
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 736
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17035
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2658
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4882
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 973
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 611
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 93
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
reference allele: T
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: VQSLOD

10-61014035-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61014035
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 61014035
    reference: chr 10
allele count: 1
allele frequency: 8.948545861297538e-6
allele num: 111750
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000391993
  ensembl transcript: ENST00000419214
  gene symbol: FAM13C
  hgvsc: ENST00000419214.2:c.1038+73G>A
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000400241
  ensembl transcript: ENST00000422313
  gene symbol: FAM13C
  hgvsc: ENST00000422313.2:c.*28G>A
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000423896
  ensembl transcript: ENST00000468840
  gene symbol: FAM13C
  hgvsc: ENST00000468840.2:c.1083+73G>A
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000395661
  ensembl transcript: ENST00000442566
  gene symbol: FAM13C
  hgvsc: ENST00000442566.3:c.1395+73G>A
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000424249
  ensembl transcript: ENST00000513059
  gene symbol: FAM13C
  hgvsc: ENST00000513059.1:c.*1264+73G>A
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000392302
  ensembl transcript: ENST00000435852
  gene symbol: FAM13C
  hgvsc: ENST00000435852.2:c.1332+73G>A
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000277705
  ensembl transcript: ENST00000277705
  gene symbol: FAM13C
  hgvsc: ENST00000277705.6:c.1395+73G>A
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362974
  ensembl transcript: ENST00000373867
  gene symbol: FAM13C
  hgvsc: ENST00000373867.3:c.1083+73G>A
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362975
  ensembl transcript: ENST00000373868
  gene symbol: FAM13C
  hgvsc: ENST00000373868.2:c.1332+73G>A
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl transcript: ENST00000489341
  gene symbol: FAM13C
  hgvsc: ENST00000489341.1:n.237+73G>A
  variant of: http://identifiers.org/hgnc/19371
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 972
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 752
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17089
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1994
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2658
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 701
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11503
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4013
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4893
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8744
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2601
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1499
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 289
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 489
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 603
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15893
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
reference allele: C
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum

10-61014036-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61014036
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 61014036
    reference: chr 10
allele count: 1
allele frequency: 8.93160179346564e-6
allele num: 111962
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000395661
  ensembl transcript: ENST00000442566
  gene symbol: FAM13C
  hgvsc: ENST00000442566.3:c.1395+72A>G
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000400241
  ensembl transcript: ENST00000422313
  gene symbol: FAM13C
  hgvsc: ENST00000422313.2:c.*27A>G
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362974
  ensembl transcript: ENST00000373867
  gene symbol: FAM13C
  hgvsc: ENST00000373867.3:c.1083+72A>G
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000392302
  ensembl transcript: ENST00000435852
  gene symbol: FAM13C
  hgvsc: ENST00000435852.2:c.1332+72A>G
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000277705
  ensembl transcript: ENST00000277705
  gene symbol: FAM13C
  hgvsc: ENST00000277705.6:c.1395+72A>G
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000423896
  ensembl transcript: ENST00000468840
  gene symbol: FAM13C
  hgvsc: ENST00000468840.2:c.1083+72A>G
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000424249
  ensembl transcript: ENST00000513059
  gene symbol: FAM13C
  hgvsc: ENST00000513059.1:c.*1264+72A>G
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362975
  ensembl transcript: ENST00000373868
  gene symbol: FAM13C
  hgvsc: ENST00000373868.2:c.1332+72A>G
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000391993
  ensembl transcript: ENST00000419214
  gene symbol: FAM13C
  hgvsc: ENST00000419214.2:c.1038+72A>G
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl transcript: ENST00000489341
  gene symbol: FAM13C
  hgvsc: ENST00000489341.1:n.237+72A>G
  variant of: http://identifiers.org/hgnc/19371
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 635
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 470
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1907
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1497
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2658
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11519
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17221
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3997
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 670
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 973
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4895
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8787
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2601
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2955
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14609
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2123
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
population: South Asian
reference allele: T
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP

10-61014040-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61014040
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 61014040
    reference: chr 10
allele count: 1
allele frequency: 8.886677093701124e-6
allele num: 112528
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000392302
  ensembl transcript: ENST00000435852
  gene symbol: FAM13C
  hgvsc: ENST00000435852.2:c.1332+68T>C
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000277705
  ensembl transcript: ENST00000277705
  gene symbol: FAM13C
  hgvsc: ENST00000277705.6:c.1395+68T>C
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362975
  ensembl transcript: ENST00000373868
  gene symbol: FAM13C
  hgvsc: ENST00000373868.2:c.1332+68T>C
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362974
  ensembl transcript: ENST00000373867
  gene symbol: FAM13C
  hgvsc: ENST00000373867.3:c.1083+68T>C
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000424249
  ensembl transcript: ENST00000513059
  gene symbol: FAM13C
  hgvsc: ENST00000513059.1:c.*1264+68T>C
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000423896
  ensembl transcript: ENST00000468840
  gene symbol: FAM13C
  hgvsc: ENST00000468840.2:c.1083+68T>C
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000395661
  ensembl transcript: ENST00000442566
  gene symbol: FAM13C
  hgvsc: ENST00000442566.3:c.1395+68T>C
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000400241
  ensembl transcript: ENST00000422313
  gene symbol: FAM13C
  hgvsc: ENST00000422313.2:c.*23T>C
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl transcript: ENST00000489341
  gene symbol: FAM13C
  hgvsc: ENST00000489341.1:n.237+68T>C
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000391993
  ensembl transcript: ENST00000419214
  gene symbol: FAM13C
  hgvsc: ENST00000419214.2:c.1038+68T>C
  variant of: http://identifiers.org/hgnc/19371
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4918
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 290
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11653
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17634
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1617
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 751
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 636
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8902
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 556
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2608
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2658
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 974
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1503
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3828
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
population: Latino
population: European (Finnish)
reference allele: A
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ

http://identifiers.org/exac.variant/10-61014056-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61014056
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 61014056
    reference: chr 10
allele count: 96431
allele frequency: 8.10753321002186e-1
allele num: 118940
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000277705
  ensembl transcript: ENST00000277705
  gene symbol: FAM13C
  hgvsc: ENST00000277705.6:c.1395+52G>T
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl transcript: ENST00000489341
  gene symbol: FAM13C
  hgvsc: ENST00000489341.1:n.237+52G>T
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000400241
  ensembl transcript: ENST00000422313
  gene symbol: FAM13C
  hgvsc: ENST00000422313.2:c.*7G>T
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362975
  ensembl transcript: ENST00000373868
  gene symbol: FAM13C
  hgvsc: ENST00000373868.2:c.1332+52G>T
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000424249
  ensembl transcript: ENST00000513059
  gene symbol: FAM13C
  hgvsc: ENST00000513059.1:c.*1264+52G>T
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000392302
  ensembl transcript: ENST00000435852
  gene symbol: FAM13C
  hgvsc: ENST00000435852.2:c.1332+52G>T
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000423896
  ensembl transcript: ENST00000468840
  gene symbol: FAM13C
  hgvsc: ENST00000468840.2:c.1083+52G>T
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000391993
  ensembl transcript: ENST00000419214
  gene symbol: FAM13C
  hgvsc: ENST00000419214.2:c.1038+52G>T
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000395661
  ensembl transcript: ENST00000442566
  gene symbol: FAM13C
  hgvsc: ENST00000442566.3:c.1395+52G>T
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362974
  ensembl transcript: ENST00000373867
  gene symbol: FAM13C
  hgvsc: ENST00000373867.3:c.1083+52G>T
  variant of: http://identifiers.org/hgnc/19371
canonical: false
consequence: 3' UTR
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5207
  bin: 6.25e1
  variant carriers: 5167
genotype depth: GenotypeDepth
  all individuals: 5760
  bin: 5.75e1
  variant carriers: 5712
genotype depth: GenotypeDepth
  all individuals: 2475
  bin: 7.75e1
  variant carriers: 2456
genotype depth: GenotypeDepth
  all individuals: 7842
  bin: 9.75e1
  variant carriers: 7710
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 2.5e0
  variant carriers: 44
genotype depth: GenotypeDepth
  all individuals: 1392
  bin: 2.75e1
  variant carriers: 847
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 7.5e0
  variant carriers: 763
genotype depth: GenotypeDepth
  all individuals: 1739
  bin: 8.25e1
  variant carriers: 1726
genotype depth: GenotypeDepth
  all individuals: 1643
  bin: 2.25e1
  variant carriers: 873
genotype depth: GenotypeDepth
  all individuals: 5691
  bin: 5.25e1
  variant carriers: 5638
genotype depth: GenotypeDepth
  all individuals: 1965
  bin: 1.25e1
  variant carriers: 1858
genotype depth: GenotypeDepth
  all individuals: 1688
  bin: 1.75e1
  variant carriers: 1675
genotype depth: GenotypeDepth
  all individuals: 4282
  bin: 6.75e1
  variant carriers: 4253
genotype depth: GenotypeDepth
  all individuals: 3304
  bin: 7.25e1
  variant carriers: 3286
genotype depth: GenotypeDepth
  all individuals: 2975
  bin: 3.75e1
  variant carriers: 2727
genotype depth: GenotypeDepth
  all individuals: 1918
  bin: 3.25e1
  variant carriers: 1477
genotype depth: GenotypeDepth
  all individuals: 5226
  bin: 4.75e1
  variant carriers: 5131
genotype depth: GenotypeDepth
  all individuals: 1248
  bin: 8.75e1
  variant carriers: 1231
genotype depth: GenotypeDepth
  all individuals: 876
  bin: 9.25e1
  variant carriers: 855
genotype depth: GenotypeDepth
  all individuals: 4310
  bin: 4.25e1
  variant carriers: 4154
genotype quality: GenotypeQuality
  all individuals: 531
  bin: 3.75e1
  variant carriers: 512
genotype quality: GenotypeQuality
  all individuals: 283
  bin: 4.25e1
  variant carriers: 275
genotype quality: GenotypeQuality
  all individuals: 429
  bin: 3.25e1
  variant carriers: 396
num of homozygotes: 39683
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: South Asian
reference allele: C
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ

10-61014064-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61014064
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 61014064
    reference: chr 10
allele count: 2
allele frequency: 1.67838740538091e-5
allele num: 119162
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000423896
  ensembl transcript: ENST00000468840
  gene symbol: FAM13C
  hgvsc: ENST00000468840.2:c.1083+44A>G
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000395661
  ensembl transcript: ENST00000442566
  gene symbol: FAM13C
  hgvsc: ENST00000442566.3:c.1395+44A>G
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000277705
  ensembl transcript: ENST00000277705
  gene symbol: FAM13C
  hgvsc: ENST00000277705.6:c.1395+44A>G
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000392302
  ensembl transcript: ENST00000435852
  gene symbol: FAM13C
  hgvsc: ENST00000435852.2:c.1332+44A>G
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl transcript: ENST00000489341
  gene symbol: FAM13C
  hgvsc: ENST00000489341.1:n.237+44A>G
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: stop_lost
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000400241
  ensembl transcript: ENST00000422313
  gene symbol: FAM13C
  hgvsc: ENST00000422313.2:c.1376A>G
  hgvsp: ENSP00000400241.2:p.Ter459TrpextTer12
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000424249
  ensembl transcript: ENST00000513059
  gene symbol: FAM13C
  hgvsc: ENST00000513059.1:c.*1264+44A>G
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362975
  ensembl transcript: ENST00000373868
  gene symbol: FAM13C
  hgvsc: ENST00000373868.2:c.1332+44A>G
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362974
  ensembl transcript: ENST00000373867
  gene symbol: FAM13C
  hgvsc: ENST00000373867.3:c.1083+44A>G
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000391993
  ensembl transcript: ENST00000419214
  gene symbol: FAM13C
  hgvsc: ENST00000419214.2:c.1038+44A>G
  variant of: http://identifiers.org/hgnc/19371
canonical: false
consequence: stop lost
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5521
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3635
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1333
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9889
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7424
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8384
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3277
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8214
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2317
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 974
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 867
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1985
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2912
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1398
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1072
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 334
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3633
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Ter459TrpextTer12
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
reference allele: T
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum

10-61014069-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61014069
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 61014069
    reference: chr 10
allele count: 1
allele frequency: 8.382370198997468e-6
allele num: 119298
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000424249
  ensembl transcript: ENST00000513059
  gene symbol: FAM13C
  hgvsc: ENST00000513059.1:c.*1264+39T>C
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362975
  ensembl transcript: ENST00000373868
  gene symbol: FAM13C
  hgvsc: ENST00000373868.2:c.1332+39T>C
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000392302
  ensembl transcript: ENST00000435852
  gene symbol: FAM13C
  hgvsc: ENST00000435852.2:c.1332+39T>C
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362974
  ensembl transcript: ENST00000373867
  gene symbol: FAM13C
  hgvsc: ENST00000373867.3:c.1083+39T>C
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000400241
  ensembl transcript: ENST00000422313
  gene symbol: FAM13C
  hgvsc: ENST00000422313.2:c.1371T>C
  hgvsp: ENST00000422313.2:c.1371T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000423896
  ensembl transcript: ENST00000468840
  gene symbol: FAM13C
  hgvsc: ENST00000468840.2:c.1083+39T>C
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000277705
  ensembl transcript: ENST00000277705
  gene symbol: FAM13C
  hgvsc: ENST00000277705.6:c.1395+39T>C
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl transcript: ENST00000489341
  gene symbol: FAM13C
  hgvsc: ENST00000489341.1:n.237+39T>C
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000391993
  ensembl transcript: ENST00000419214
  gene symbol: FAM13C
  hgvsc: ENST00000419214.2:c.1038+39T>C
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000395661
  ensembl transcript: ENST00000442566
  gene symbol: FAM13C
  hgvsc: ENST00000442566.3:c.1395+39T>C
  variant of: http://identifiers.org/hgnc/19371
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5522
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8274
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7422
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3267
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3278
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1332
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 938
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1900
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9901
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3634
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2317
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1104
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 867
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8386
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3634
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Asp457Asp
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: A
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD

10-61014072-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61014072
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 61014072
    reference: chr 10
allele count: 1
allele frequency: 8.37885846432282e-6
allele num: 119348
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362974
  ensembl transcript: ENST00000373867
  gene symbol: FAM13C
  hgvsc: ENST00000373867.3:c.1083+36T>C
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000424249
  ensembl transcript: ENST00000513059
  gene symbol: FAM13C
  hgvsc: ENST00000513059.1:c.*1264+36T>C
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl transcript: ENST00000489341
  gene symbol: FAM13C
  hgvsc: ENST00000489341.1:n.237+36T>C
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362975
  ensembl transcript: ENST00000373868
  gene symbol: FAM13C
  hgvsc: ENST00000373868.2:c.1332+36T>C
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000423896
  ensembl transcript: ENST00000468840
  gene symbol: FAM13C
  hgvsc: ENST00000468840.2:c.1083+36T>C
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000395661
  ensembl transcript: ENST00000442566
  gene symbol: FAM13C
  hgvsc: ENST00000442566.3:c.1395+36T>C
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000392302
  ensembl transcript: ENST00000435852
  gene symbol: FAM13C
  hgvsc: ENST00000435852.2:c.1332+36T>C
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000391993
  ensembl transcript: ENST00000419214
  gene symbol: FAM13C
  hgvsc: ENST00000419214.2:c.1038+36T>C
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000400241
  ensembl transcript: ENST00000422313
  gene symbol: FAM13C
  hgvsc: ENST00000422313.2:c.1368T>C
  hgvsp: ENST00000422313.2:c.1368T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000277705
  ensembl transcript: ENST00000277705
  gene symbol: FAM13C
  hgvsc: ENST00000277705.6:c.1395+36T>C
  variant of: http://identifiers.org/hgnc/19371
canonical: false
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 867
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7422
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 912
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3635
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2317
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 926
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5519
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9895
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8306
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3518
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3277
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1331
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1835
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8389
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 440
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Thr456Thr
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: BaseQRankSum

10-61014074-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61014074
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 61014074
    reference: chr 10
allele count: 1
allele frequency: 8.375069094320028e-6
allele num: 119402
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000395661
  ensembl transcript: ENST00000442566
  gene symbol: FAM13C
  hgvsc: ENST00000442566.3:c.1395+34A>G
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000423896
  ensembl transcript: ENST00000468840
  gene symbol: FAM13C
  hgvsc: ENST00000468840.2:c.1083+34A>G
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000424249
  ensembl transcript: ENST00000513059
  gene symbol: FAM13C
  hgvsc: ENST00000513059.1:c.*1264+34A>G
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000392302
  ensembl transcript: ENST00000435852
  gene symbol: FAM13C
  hgvsc: ENST00000435852.2:c.1332+34A>G
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000277705
  ensembl transcript: ENST00000277705
  gene symbol: FAM13C
  hgvsc: ENST00000277705.6:c.1395+34A>G
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl transcript: ENST00000489341
  gene symbol: FAM13C
  hgvsc: ENST00000489341.1:n.237+34A>G
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000391993
  ensembl transcript: ENST00000419214
  gene symbol: FAM13C
  hgvsc: ENST00000419214.2:c.1038+34A>G
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362975
  ensembl transcript: ENST00000373868
  gene symbol: FAM13C
  hgvsc: ENST00000373868.2:c.1332+34A>G
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000400241
  ensembl transcript: ENST00000422313
  gene symbol: FAM13C
  hgvsc: ENST00000422313.2:c.1366A>G
  hgvsp: ENSP00000400241.2:p.Thr456Ala
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362974
  ensembl transcript: ENST00000373867
  gene symbol: FAM13C
  hgvsc: ENST00000373867.3:c.1083+34A>G
  variant of: http://identifiers.org/hgnc/19371
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8322
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5519
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3636
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3710
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1330
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 867
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 819
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9902
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 902
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8386
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1746
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3277
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7421
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2316
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 423
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2083
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Thr456Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: T
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum

10-61014083-ACAG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61014083
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 61014080
    reference: chr 10
allele count: 7
allele frequency: 5.850299201016281e-5
allele num: 119652
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000395661
  ensembl transcript: ENST00000442566
  gene symbol: FAM13C
  hgvsc: ENST00000442566.3:c.1395+22_1395+24delCTG
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000424249
  ensembl transcript: ENST00000513059
  gene symbol: FAM13C
  hgvsc: ENST00000513059.1:c.*1264+22_*1264+24delCTG
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000392302
  ensembl transcript: ENST00000435852
  gene symbol: FAM13C
  hgvsc: ENST00000435852.2:c.1332+22_1332+24delCTG
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362974
  ensembl transcript: ENST00000373867
  gene symbol: FAM13C
  hgvsc: ENST00000373867.3:c.1083+22_1083+24delCTG
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000277705
  ensembl transcript: ENST00000277705
  gene symbol: FAM13C
  hgvsc: ENST00000277705.6:c.1395+22_1395+24delCTG
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000391993
  ensembl transcript: ENST00000419214
  gene symbol: FAM13C
  hgvsc: ENST00000419214.2:c.1038+22_1038+24delCTG
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000400241
  ensembl transcript: ENST00000422313
  gene symbol: FAM13C
  hgvsc: ENST00000422313.2:c.1354_1356delCTG
  hgvsp: ENSP00000400241.2:p.Leu452del
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362975
  ensembl transcript: ENST00000373868
  gene symbol: FAM13C
  hgvsc: ENST00000373868.2:c.1332+22_1332+24delCTG
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000423896
  ensembl transcript: ENST00000468840
  gene symbol: FAM13C
  hgvsc: ENST00000468840.2:c.1083+22_1083+24delCTG
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl transcript: ENST00000489341
  gene symbol: FAM13C
  hgvsc: ENST00000489341.1:n.237+22_237+24delCTG
  variant of: http://identifiers.org/hgnc/19371
canonical: false
consequence: inframe deletion
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8445
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2315
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1295
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9918
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7419
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4522
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8384
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5518
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1330
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3636
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3280
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 406
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3823
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Leu452del
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Other
population: African
population: East Asian
population: European (Finnish)
population: Latino
reference allele: ACAG
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum

10-61014100-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61014100
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 61014100
    reference: chr 10
allele count: 2
allele frequency: 1.660936435962596e-5
allele num: 120414
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000391993
  ensembl transcript: ENST00000419214
  gene symbol: FAM13C
  hgvsc: ENST00000419214.2:c.1038+8A>G
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000400241
  ensembl transcript: ENST00000422313
  gene symbol: FAM13C
  hgvsc: ENST00000422313.2:c.1340A>G
  hgvsp: ENSP00000400241.2:p.Gln447Arg
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000395661
  ensembl transcript: ENST00000442566
  gene symbol: FAM13C
  hgvsc: ENST00000442566.3:c.1395+8A>G
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000424249
  ensembl transcript: ENST00000513059
  gene symbol: FAM13C
  hgvsc: ENST00000513059.1:c.*1264+8A>G
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000277705
  ensembl transcript: ENST00000277705
  gene symbol: FAM13C
  hgvsc: ENST00000277705.6:c.1395+8A>G
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000423896
  ensembl transcript: ENST00000468840
  gene symbol: FAM13C
  hgvsc: ENST00000468840.2:c.1083+8A>G
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362975
  ensembl transcript: ENST00000373868
  gene symbol: FAM13C
  hgvsc: ENST00000373868.2:c.1332+8A>G
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362974
  ensembl transcript: ENST00000373867
  gene symbol: FAM13C
  hgvsc: ENST00000373867.3:c.1083+8A>G
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl transcript: ENST00000489341
  gene symbol: FAM13C
  hgvsc: ENST00000489341.1:n.237+8A>G
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000392302
  ensembl transcript: ENST00000435852
  gene symbol: FAM13C
  hgvsc: ENST00000435852.2:c.1332+8A>G
  variant of: http://identifiers.org/hgnc/19371
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1330
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8882
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3634
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7421
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5742
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3277
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2316
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 321
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9961
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8389
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 465
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5517
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3838
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Gln447Arg
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
reference allele: T
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQ

10-61014107-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61014107
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 61014107
    reference: chr 10
allele count: 1
allele frequency: 8.285141427364165e-6
allele num: 120698
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: non_coding_transcript_variant
  ensembl gene: ENSG00000148541
  ensembl transcript: ENST00000489341
  gene symbol: FAM13C
  hgvsc: ENST00000489341.1:n.237+1G>C
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362974
  ensembl transcript: ENST00000373867
  gene symbol: FAM13C
  hgvsc: ENST00000373867.3:c.1083+1G>C
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000277705
  ensembl transcript: ENST00000277705
  gene symbol: FAM13C
  hgvsc: ENST00000277705.6:c.1395+1G>C
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000423896
  ensembl transcript: ENST00000468840
  gene symbol: FAM13C
  hgvsc: ENST00000468840.2:c.1083+1G>C
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000392302
  ensembl transcript: ENST00000435852
  gene symbol: FAM13C
  hgvsc: ENST00000435852.2:c.1332+1G>C
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000391993
  ensembl transcript: ENST00000419214
  gene symbol: FAM13C
  hgvsc: ENST00000419214.2:c.1038+1G>C
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000424249
  ensembl transcript: ENST00000513059
  gene symbol: FAM13C
  hgvsc: ENST00000513059.1:c.*1264+1G>C
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000400241
  ensembl transcript: ENST00000422313
  gene symbol: FAM13C
  hgvsc: ENST00000422313.2:c.1333G>C
  hgvsp: ENSP00000400241.2:p.Val445Leu
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: splice_donor_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000395661
  ensembl transcript: ENST00000442566
  gene symbol: FAM13C
  hgvsc: ENST00000442566.3:c.1395+1G>C
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: true
  consequence: splice_donor_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362975
  ensembl transcript: ENST00000373868
  gene symbol: FAM13C
  hgvsc: ENST00000373868.2:c.1332+1G>C
  variant of: http://identifiers.org/hgnc/19371
canonical: true
consequence: splice donor
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8390
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3276
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9974
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1330
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5958
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5519
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8944
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7420
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2316
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3634
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2085
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 4.25e1
  variant carriers: 0
hgvs: c.1332+1G>C
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: QD

10-61014112-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61014112
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 61014112
    reference: chr 10
allele count: 45
allele frequency: 3.725042217145128e-4
allele num: 120804
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000391993
  ensembl transcript: ENST00000419214
  gene symbol: FAM13C
  hgvsc: ENST00000419214.2:c.1034C>T
  hgvsp: ENSP00000391993.2:p.Thr345Ile
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000395661
  ensembl transcript: ENST00000442566
  gene symbol: FAM13C
  hgvsc: ENST00000442566.3:c.1391C>T
  hgvsp: ENSP00000395661.3:p.Thr464Ile
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000400241
  ensembl transcript: ENST00000422313
  gene symbol: FAM13C
  hgvsc: ENST00000422313.2:c.1328C>T
  hgvsp: ENSP00000400241.2:p.Thr443Ile
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362975
  ensembl transcript: ENST00000373868
  gene symbol: FAM13C
  hgvsc: ENST00000373868.2:c.1328C>T
  hgvsp: ENSP00000362975.2:p.Thr443Ile
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362974
  ensembl transcript: ENST00000373867
  gene symbol: FAM13C
  hgvsc: ENST00000373867.3:c.1079C>T
  hgvsp: ENSP00000362974.3:p.Thr360Ile
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148541
  ensembl transcript: ENST00000489341
  gene symbol: FAM13C
  hgvsc: ENST00000489341.1:n.233C>T
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000392302
  ensembl transcript: ENST00000435852
  gene symbol: FAM13C
  hgvsc: ENST00000435852.2:c.1328C>T
  hgvsp: ENSP00000392302.2:p.Thr443Ile
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000423896
  ensembl transcript: ENST00000468840
  gene symbol: FAM13C
  hgvsc: ENST00000468840.2:c.1079C>T
  hgvsp: ENSP00000423896.1:p.Thr360Ile
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000277705
  ensembl transcript: ENST00000277705
  gene symbol: FAM13C
  hgvsc: ENST00000277705.6:c.1391C>T
  hgvsp: ENSP00000277705.6:p.Thr464Ile
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000424249
  ensembl transcript: ENST00000513059
  gene symbol: FAM13C
  hgvsc: ENST00000513059.1:c.*1260C>T
  variant of: http://identifiers.org/hgnc/19371
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 863
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3302
  bin: 9.75e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7416
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8984
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8382
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2313
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5516
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1325
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9972
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 6029
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3632
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Thr443Ile
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Latino
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: DP

10-61014112-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61014112
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 61014112
    reference: chr 10
allele count: 1
allele frequency: 8.27787159365584e-6
allele num: 120804
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000391993
  ensembl transcript: ENST00000419214
  gene symbol: FAM13C
  hgvsc: ENST00000419214.2:c.1034C>A
  hgvsp: ENSP00000391993.2:p.Thr345Lys
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362974
  ensembl transcript: ENST00000373867
  gene symbol: FAM13C
  hgvsc: ENST00000373867.3:c.1079C>A
  hgvsp: ENSP00000362974.3:p.Thr360Lys
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000423896
  ensembl transcript: ENST00000468840
  gene symbol: FAM13C
  hgvsc: ENST00000468840.2:c.1079C>A
  hgvsp: ENSP00000423896.1:p.Thr360Lys
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000277705
  ensembl transcript: ENST00000277705
  gene symbol: FAM13C
  hgvsc: ENST00000277705.6:c.1391C>A
  hgvsp: ENSP00000277705.6:p.Thr464Lys
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148541
  ensembl transcript: ENST00000489341
  gene symbol: FAM13C
  hgvsc: ENST00000489341.1:n.233C>A
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000424249
  ensembl transcript: ENST00000513059
  gene symbol: FAM13C
  hgvsc: ENST00000513059.1:c.*1260C>A
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000400241
  ensembl transcript: ENST00000422313
  gene symbol: FAM13C
  hgvsc: ENST00000422313.2:c.1328C>A
  hgvsp: ENSP00000400241.2:p.Thr443Lys
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000395661
  ensembl transcript: ENST00000442566
  gene symbol: FAM13C
  hgvsc: ENST00000442566.3:c.1391C>A
  hgvsp: ENSP00000395661.3:p.Thr464Lys
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362975
  ensembl transcript: ENST00000373868
  gene symbol: FAM13C
  hgvsc: ENST00000373868.2:c.1328C>A
  hgvsp: ENSP00000362975.2:p.Thr443Lys
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000392302
  ensembl transcript: ENST00000435852
  gene symbol: FAM13C
  hgvsc: ENST00000435852.2:c.1328C>A
  hgvsp: ENSP00000392302.2:p.Thr443Lys
  variant of: http://identifiers.org/hgnc/19371
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2313
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1325
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9972
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5516
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 286
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6029
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8382
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3632
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 548
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 863
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8984
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3302
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7416
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25184
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Thr443Lys
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
population: Latino
population: African
reference allele: G
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff

10-61014129-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61014129
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 61014129
    reference: chr 10
allele count: 1
allele frequency: 8.266512358435975e-6
allele num: 120970
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000392302
  ensembl transcript: ENST00000435852
  gene symbol: FAM13C
  hgvsc: ENST00000435852.2:c.1311A>G
  hgvsp: ENST00000435852.2:c.1311A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362975
  ensembl transcript: ENST00000373868
  gene symbol: FAM13C
  hgvsc: ENST00000373868.2:c.1311A>G
  hgvsp: ENST00000373868.2:c.1311A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000423896
  ensembl transcript: ENST00000468840
  gene symbol: FAM13C
  hgvsc: ENST00000468840.2:c.1062A>G
  hgvsp: ENST00000468840.2:c.1062A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000391993
  ensembl transcript: ENST00000419214
  gene symbol: FAM13C
  hgvsc: ENST00000419214.2:c.1017A>G
  hgvsp: ENST00000419214.2:c.1017A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362974
  ensembl transcript: ENST00000373867
  gene symbol: FAM13C
  hgvsc: ENST00000373867.3:c.1062A>G
  hgvsp: ENST00000373867.3:c.1062A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000424249
  ensembl transcript: ENST00000513059
  gene symbol: FAM13C
  hgvsc: ENST00000513059.1:c.*1243A>G
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000400241
  ensembl transcript: ENST00000422313
  gene symbol: FAM13C
  hgvsc: ENST00000422313.2:c.1311A>G
  hgvsp: ENST00000422313.2:c.1311A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148541
  ensembl transcript: ENST00000489341
  gene symbol: FAM13C
  hgvsc: ENST00000489341.1:n.216A>G
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000395661
  ensembl transcript: ENST00000442566
  gene symbol: FAM13C
  hgvsc: ENST00000442566.3:c.1374A>G
  hgvsp: ENST00000442566.3:c.1374A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000277705
  ensembl transcript: ENST00000277705
  gene symbol: FAM13C
  hgvsc: ENST00000277705.6:c.1374A>G
  hgvsp: ENST00000277705.6:c.1374A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19371
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6099
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9085
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8390
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7417
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9984
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3636
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 75
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 863
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3274
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2311
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1326
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5523
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3631
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Thr437Thr
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: Other
population: African
population: East Asian
population: European (Non-Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: MQ
site quality: InbreedingCoeff

10-61014171-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61014171
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 61014171
    reference: chr 10
allele count: 10
allele frequency: 8.325701440346349e-5
allele num: 120110
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000424249
  ensembl transcript: ENST00000513059
  gene symbol: FAM13C
  hgvsc: ENST00000513059.1:c.*1201G>A
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000277705
  ensembl transcript: ENST00000277705
  gene symbol: FAM13C
  hgvsc: ENST00000277705.6:c.1332G>A
  hgvsp: ENST00000277705.6:c.1332G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000400241
  ensembl transcript: ENST00000422313
  gene symbol: FAM13C
  hgvsc: ENST00000422313.2:c.1269G>A
  hgvsp: ENST00000422313.2:c.1269G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000395661
  ensembl transcript: ENST00000442566
  gene symbol: FAM13C
  hgvsc: ENST00000442566.3:c.1332G>A
  hgvsp: ENST00000442566.3:c.1332G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000391993
  ensembl transcript: ENST00000419214
  gene symbol: FAM13C
  hgvsc: ENST00000419214.2:c.975G>A
  hgvsp: ENST00000419214.2:c.975G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000392302
  ensembl transcript: ENST00000435852
  gene symbol: FAM13C
  hgvsc: ENST00000435852.2:c.1269G>A
  hgvsp: ENST00000435852.2:c.1269G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000423896
  ensembl transcript: ENST00000468840
  gene symbol: FAM13C
  hgvsc: ENST00000468840.2:c.1020G>A
  hgvsp: ENST00000468840.2:c.1020G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148541
  ensembl transcript: ENST00000489341
  gene symbol: FAM13C
  hgvsc: ENST00000489341.1:n.174G>A
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362974
  ensembl transcript: ENST00000373867
  gene symbol: FAM13C
  hgvsc: ENST00000373867.3:c.1020G>A
  hgvsp: ENST00000373867.3:c.1020G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362975
  ensembl transcript: ENST00000373868
  gene symbol: FAM13C
  hgvsc: ENST00000373868.2:c.1269G>A
  hgvsp: ENST00000373868.2:c.1269G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/19371
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5075
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1326
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3636
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 608
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 678
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10001
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9093
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3278
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 864
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7416
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5524
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2311
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8391
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4761
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Pro423Pro
num of homozygotes: 0
population: European (Finnish)
population: Other
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
population: African
reference allele: C
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum

10-61014175-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61014175
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 61014175
    reference: chr 10
allele count: 1
allele frequency: 8.345294922722569e-6
allele num: 119828
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362974
  ensembl transcript: ENST00000373867
  gene symbol: FAM13C
  hgvsc: ENST00000373867.3:c.1016A>G
  hgvsp: ENSP00000362974.3:p.Lys339Arg
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000400241
  ensembl transcript: ENST00000422313
  gene symbol: FAM13C
  hgvsc: ENST00000422313.2:c.1265A>G
  hgvsp: ENSP00000400241.2:p.Lys422Arg
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000424249
  ensembl transcript: ENST00000513059
  gene symbol: FAM13C
  hgvsc: ENST00000513059.1:c.*1197A>G
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362975
  ensembl transcript: ENST00000373868
  gene symbol: FAM13C
  hgvsc: ENST00000373868.2:c.1265A>G
  hgvsp: ENSP00000362975.2:p.Lys422Arg
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000423896
  ensembl transcript: ENST00000468840
  gene symbol: FAM13C
  hgvsc: ENST00000468840.2:c.1016A>G
  hgvsp: ENSP00000423896.1:p.Lys339Arg
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000391993
  ensembl transcript: ENST00000419214
  gene symbol: FAM13C
  hgvsc: ENST00000419214.2:c.971A>G
  hgvsp: ENSP00000391993.2:p.Lys324Arg
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148541
  ensembl transcript: ENST00000489341
  gene symbol: FAM13C
  hgvsc: ENST00000489341.1:n.170A>G
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000395661
  ensembl transcript: ENST00000442566
  gene symbol: FAM13C
  hgvsc: ENST00000442566.3:c.1328A>G
  hgvsp: ENSP00000395661.3:p.Lys443Arg
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000277705
  ensembl transcript: ENST00000277705
  gene symbol: FAM13C
  hgvsc: ENST00000277705.6:c.1328A>G
  hgvsp: ENSP00000277705.6:p.Lys443Arg
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000392302
  ensembl transcript: ENST00000435852
  gene symbol: FAM13C
  hgvsc: ENST00000435852.2:c.1265A>G
  hgvsp: ENSP00000392302.2:p.Lys422Arg
  variant of: http://identifiers.org/hgnc/19371
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 759
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7416
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2311
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 678
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5522
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8386
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4756
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9068
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1326
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 863
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 207
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3272
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9979
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3636
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Lys422Arg
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: Other
population: European (Non-Finnish)
population: Latino
population: South Asian
reference allele: T
site quality: MQ
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum

10-61014179-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61014179
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 61014179
    reference: chr 10
allele count: 2
allele frequency: 1.67313612635524e-5
allele num: 119536
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148541
  ensembl transcript: ENST00000489341
  gene symbol: FAM13C
  hgvsc: ENST00000489341.1:n.166A>G
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362974
  ensembl transcript: ENST00000373867
  gene symbol: FAM13C
  hgvsc: ENST00000373867.3:c.1012A>G
  hgvsp: ENSP00000362974.3:p.Ile338Val
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000395661
  ensembl transcript: ENST00000442566
  gene symbol: FAM13C
  hgvsc: ENST00000442566.3:c.1324A>G
  hgvsp: ENSP00000395661.3:p.Ile442Val
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000392302
  ensembl transcript: ENST00000435852
  gene symbol: FAM13C
  hgvsc: ENST00000435852.2:c.1261A>G
  hgvsp: ENSP00000392302.2:p.Ile421Val
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000400241
  ensembl transcript: ENST00000422313
  gene symbol: FAM13C
  hgvsc: ENST00000422313.2:c.1261A>G
  hgvsp: ENSP00000400241.2:p.Ile421Val
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000424249
  ensembl transcript: ENST00000513059
  gene symbol: FAM13C
  hgvsc: ENST00000513059.1:c.*1193A>G
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000391993
  ensembl transcript: ENST00000419214
  gene symbol: FAM13C
  hgvsc: ENST00000419214.2:c.967A>G
  hgvsp: ENSP00000391993.2:p.Ile323Val
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000277705
  ensembl transcript: ENST00000277705
  gene symbol: FAM13C
  hgvsc: ENST00000277705.6:c.1324A>G
  hgvsp: ENSP00000277705.6:p.Ile442Val
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000423896
  ensembl transcript: ENST00000468840
  gene symbol: FAM13C
  hgvsc: ENST00000468840.2:c.1012A>G
  hgvsp: ENSP00000423896.1:p.Ile338Val
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362975
  ensembl transcript: ENST00000373868
  gene symbol: FAM13C
  hgvsc: ENST00000373868.2:c.1261A>G
  hgvsp: ENSP00000362975.2:p.Ile421Val
  variant of: http://identifiers.org/hgnc/19371
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7416
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 887
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 678
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 898
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 440
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9974
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2311
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1326
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4448
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 863
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8385
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3636
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5521
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3273
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8995
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ile421Val
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
reference allele: T
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: QD

10-61014182-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61014182
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 61014182
    reference: chr 10
allele count: 1
allele frequency: 8.377735330585436e-6
allele num: 119364
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000400241
  ensembl transcript: ENST00000422313
  gene symbol: FAM13C
  hgvsc: ENST00000422313.2:c.1258C>T
  hgvsp: ENSP00000400241.2:p.Leu420Phe
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000148541
  ensembl transcript: ENST00000489341
  gene symbol: FAM13C
  hgvsc: ENST00000489341.1:n.163C>T
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000392302
  ensembl transcript: ENST00000435852
  gene symbol: FAM13C
  hgvsc: ENST00000435852.2:c.1258C>T
  hgvsp: ENSP00000392302.2:p.Leu420Phe
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000277705
  ensembl transcript: ENST00000277705
  gene symbol: FAM13C
  hgvsc: ENST00000277705.6:c.1321C>T
  hgvsp: ENSP00000277705.6:p.Leu441Phe
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000424249
  ensembl transcript: ENST00000513059
  gene symbol: FAM13C
  hgvsc: ENST00000513059.1:c.*1190C>T
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000391993
  ensembl transcript: ENST00000419214
  gene symbol: FAM13C
  hgvsc: ENST00000419214.2:c.964C>T
  hgvsp: ENSP00000391993.2:p.Leu322Phe
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362975
  ensembl transcript: ENST00000373868
  gene symbol: FAM13C
  hgvsc: ENST00000373868.2:c.1258C>T
  hgvsp: ENSP00000362975.2:p.Leu420Phe
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000423896
  ensembl transcript: ENST00000468840
  gene symbol: FAM13C
  hgvsc: ENST00000468840.2:c.1009C>T
  hgvsp: ENSP00000423896.1:p.Leu337Phe
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362974
  ensembl transcript: ENST00000373867
  gene symbol: FAM13C
  hgvsc: ENST00000373867.3:c.1009C>T
  hgvsp: ENSP00000362974.3:p.Leu337Phe
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000395661
  ensembl transcript: ENST00000442566
  gene symbol: FAM13C
  hgvsc: ENST00000442566.3:c.1321C>T
  hgvsp: ENSP00000395661.3:p.Leu441Phe
  variant of: http://identifiers.org/hgnc/19371
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4283
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1008
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7416
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8386
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 863
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 678
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 968
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1326
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8956
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9973
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3636
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3272
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2311
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5521
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Leu420Phe
num of homozygotes: 0
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: G
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum

10-61014211-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61014211
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 61014211
    reference: chr 10
allele count: 1
allele frequency: 8.633192900062159e-6
allele num: 115832
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000400241
  ensembl transcript: ENST00000422313
  gene symbol: FAM13C
  hgvsc: ENST00000422313.2:c.1237-8T>A
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362974
  ensembl transcript: ENST00000373867
  gene symbol: FAM13C
  hgvsc: ENST00000373867.3:c.988-8T>A
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000395661
  ensembl transcript: ENST00000442566
  gene symbol: FAM13C
  hgvsc: ENST00000442566.3:c.1300-8T>A
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000423896
  ensembl transcript: ENST00000468840
  gene symbol: FAM13C
  hgvsc: ENST00000468840.2:c.988-8T>A
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl transcript: ENST00000489341
  gene symbol: FAM13C
  hgvsc: ENST00000489341.1:n.142-8T>A
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000424249
  ensembl transcript: ENST00000513059
  gene symbol: FAM13C
  hgvsc: ENST00000513059.1:c.*1169-8T>A
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000391993
  ensembl transcript: ENST00000419214
  gene symbol: FAM13C
  hgvsc: ENST00000419214.2:c.943-8T>A
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362975
  ensembl transcript: ENST00000373868
  gene symbol: FAM13C
  hgvsc: ENST00000373868.2:c.1237-8T>A
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000392302
  ensembl transcript: ENST00000435852
  gene symbol: FAM13C
  hgvsc: ENST00000435852.2:c.1237-8T>A
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000277705
  ensembl transcript: ENST00000277705
  gene symbol: FAM13C
  hgvsc: ENST00000277705.6:c.1300-8T>A
  variant of: http://identifiers.org/hgnc/19371
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1326
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9881
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2236
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 678
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7414
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2151
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 865
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2340
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8132
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2316
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8380
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3272
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5521
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3637
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 3.75e1
  variant carriers: 0
hgvs: c.1237-8T>A
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: Other
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD

10-61014215-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61014215
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 61014215
    reference: chr 10
allele count: 2
allele frequency: 1.729475450095986e-5
allele num: 115642
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362975
  ensembl transcript: ENST00000373868
  gene symbol: FAM13C
  hgvsc: ENST00000373868.2:c.1237-12C>A
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362974
  ensembl transcript: ENST00000373867
  gene symbol: FAM13C
  hgvsc: ENST00000373867.3:c.988-12C>A
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000400241
  ensembl transcript: ENST00000422313
  gene symbol: FAM13C
  hgvsc: ENST00000422313.2:c.1237-12C>A
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl transcript: ENST00000489341
  gene symbol: FAM13C
  hgvsc: ENST00000489341.1:n.142-12C>A
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000395661
  ensembl transcript: ENST00000442566
  gene symbol: FAM13C
  hgvsc: ENST00000442566.3:c.1300-12C>A
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000392302
  ensembl transcript: ENST00000435852
  gene symbol: FAM13C
  hgvsc: ENST00000435852.2:c.1237-12C>A
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000391993
  ensembl transcript: ENST00000419214
  gene symbol: FAM13C
  hgvsc: ENST00000419214.2:c.943-12C>A
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000423896
  ensembl transcript: ENST00000468840
  gene symbol: FAM13C
  hgvsc: ENST00000468840.2:c.988-12C>A
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000277705
  ensembl transcript: ENST00000277705
  gene symbol: FAM13C
  hgvsc: ENST00000277705.6:c.1300-12C>A
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000424249
  ensembl transcript: ENST00000513059
  gene symbol: FAM13C
  hgvsc: ENST00000513059.1:c.*1169-12C>A
  variant of: http://identifiers.org/hgnc/19371
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7414
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8109
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 494
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8381
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2306
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1328
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 863
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2332
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9860
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3638
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2094
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2313
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3271
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5521
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2244
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3751
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum

10-61014226-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61014226
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 61014226
    reference: chr 10
allele count: 4
allele frequency: 3.506004031904637e-5
allele num: 114090
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362975
  ensembl transcript: ENST00000373868
  gene symbol: FAM13C
  hgvsc: ENST00000373868.2:c.1237-23A>C
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000400241
  ensembl transcript: ENST00000422313
  gene symbol: FAM13C
  hgvsc: ENST00000422313.2:c.1237-23A>C
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000423896
  ensembl transcript: ENST00000468840
  gene symbol: FAM13C
  hgvsc: ENST00000468840.2:c.988-23A>C
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000277705
  ensembl transcript: ENST00000277705
  gene symbol: FAM13C
  hgvsc: ENST00000277705.6:c.1300-23A>C
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000395661
  ensembl transcript: ENST00000442566
  gene symbol: FAM13C
  hgvsc: ENST00000442566.3:c.1300-23A>C
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl transcript: ENST00000489341
  gene symbol: FAM13C
  hgvsc: ENST00000489341.1:n.142-23A>C
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000424249
  ensembl transcript: ENST00000513059
  gene symbol: FAM13C
  hgvsc: ENST00000513059.1:c.*1169-23A>C
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362974
  ensembl transcript: ENST00000373867
  gene symbol: FAM13C
  hgvsc: ENST00000373867.3:c.988-23A>C
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000391993
  ensembl transcript: ENST00000419214
  gene symbol: FAM13C
  hgvsc: ENST00000419214.2:c.943-23A>C
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000392302
  ensembl transcript: ENST00000435852
  gene symbol: FAM13C
  hgvsc: ENST00000435852.2:c.1237-23A>C
  variant of: http://identifiers.org/hgnc/19371
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3638
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 863
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2162
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2541
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7928
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7400
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1909
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3271
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5508
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9756
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2316
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 917
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8356
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1324
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 402
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3852
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 283
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: Other
population: South Asian
reference allele: T
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: VQSLOD

10-61014231-CCT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61014231
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 61014229
    reference: chr 10
allele count: 5
allele frequency: 4.408782294330306e-5
allele num: 113410
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362975
  ensembl transcript: ENST00000373868
  gene symbol: FAM13C
  hgvsc: ENST00000373868.2:c.1237-30_1237-29delAG
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000391993
  ensembl transcript: ENST00000419214
  gene symbol: FAM13C
  hgvsc: ENST00000419214.2:c.943-30_943-29delAG
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl transcript: ENST00000489341
  gene symbol: FAM13C
  hgvsc: ENST00000489341.1:n.142-30_142-29delAG
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362974
  ensembl transcript: ENST00000373867
  gene symbol: FAM13C
  hgvsc: ENST00000373867.3:c.988-30_988-29delAG
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000400241
  ensembl transcript: ENST00000422313
  gene symbol: FAM13C
  hgvsc: ENST00000422313.2:c.1237-30_1237-29delAG
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000423896
  ensembl transcript: ENST00000468840
  gene symbol: FAM13C
  hgvsc: ENST00000468840.2:c.988-30_988-29delAG
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000395661
  ensembl transcript: ENST00000442566
  gene symbol: FAM13C
  hgvsc: ENST00000442566.3:c.1300-30_1300-29delAG
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000424249
  ensembl transcript: ENST00000513059
  gene symbol: FAM13C
  hgvsc: ENST00000513059.1:c.*1169-30_*1169-29delAG
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000392302
  ensembl transcript: ENST00000435852
  gene symbol: FAM13C
  hgvsc: ENST00000435852.2:c.1237-30_1237-29delAG
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000277705
  ensembl transcript: ENST00000277705
  gene symbol: FAM13C
  hgvsc: ENST00000277705.6:c.1300-30_1300-29delAG
  variant of: http://identifiers.org/hgnc/19371
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5506
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7783
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7371
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8284
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2311
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1887
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2682
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1323
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1126
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9603
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2115
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3635
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3271
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4345
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 397
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 209
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: Latino
reference allele: CCT
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD

10-61014236-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61014236
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 61014236
    reference: chr 10
allele count: 1
allele frequency: 8.863205289560917e-6
allele num: 112826
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000391993
  ensembl transcript: ENST00000419214
  gene symbol: FAM13C
  hgvsc: ENST00000419214.2:c.943-33G>C
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362975
  ensembl transcript: ENST00000373868
  gene symbol: FAM13C
  hgvsc: ENST00000373868.2:c.1237-33G>C
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000423896
  ensembl transcript: ENST00000468840
  gene symbol: FAM13C
  hgvsc: ENST00000468840.2:c.988-33G>C
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000395661
  ensembl transcript: ENST00000442566
  gene symbol: FAM13C
  hgvsc: ENST00000442566.3:c.1300-33G>C
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000400241
  ensembl transcript: ENST00000422313
  gene symbol: FAM13C
  hgvsc: ENST00000422313.2:c.1237-33G>C
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000277705
  ensembl transcript: ENST00000277705
  gene symbol: FAM13C
  hgvsc: ENST00000277705.6:c.1300-33G>C
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl transcript: ENST00000489341
  gene symbol: FAM13C
  hgvsc: ENST00000489341.1:n.142-33G>C
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000424249
  ensembl transcript: ENST00000513059
  gene symbol: FAM13C
  hgvsc: ENST00000513059.1:c.*1169-33G>C
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362974
  ensembl transcript: ENST00000373867
  gene symbol: FAM13C
  hgvsc: ENST00000373867.3:c.988-33G>C
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000392302
  ensembl transcript: ENST00000435852
  gene symbol: FAM13C
  hgvsc: ENST00000435852.2:c.1237-33G>C
  variant of: http://identifiers.org/hgnc/19371
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1890
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 374
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7338
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2804
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1302
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8146
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7638
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 678
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9364
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5492
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3629
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3271
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2100
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2308
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1323
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3773
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 216
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum

10-61014239-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61014239
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 61014239
    reference: chr 10
allele count: 14
allele frequency: 1.243736896343414e-4
allele num: 112564
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000400241
  ensembl transcript: ENST00000422313
  gene symbol: FAM13C
  hgvsc: ENST00000422313.2:c.1237-36T>C
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl transcript: ENST00000489341
  gene symbol: FAM13C
  hgvsc: ENST00000489341.1:n.142-36T>C
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000391993
  ensembl transcript: ENST00000419214
  gene symbol: FAM13C
  hgvsc: ENST00000419214.2:c.943-36T>C
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362975
  ensembl transcript: ENST00000373868
  gene symbol: FAM13C
  hgvsc: ENST00000373868.2:c.1237-36T>C
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000392302
  ensembl transcript: ENST00000435852
  gene symbol: FAM13C
  hgvsc: ENST00000435852.2:c.1237-36T>C
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000395661
  ensembl transcript: ENST00000442566
  gene symbol: FAM13C
  hgvsc: ENST00000442566.3:c.1300-36T>C
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000424249
  ensembl transcript: ENST00000513059
  gene symbol: FAM13C
  hgvsc: ENST00000513059.1:c.*1169-36T>C
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000423896
  ensembl transcript: ENST00000468840
  gene symbol: FAM13C
  hgvsc: ENST00000468840.2:c.988-36T>C
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000277705
  ensembl transcript: ENST00000277705
  gene symbol: FAM13C
  hgvsc: ENST00000277705.6:c.1300-36T>C
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362974
  ensembl transcript: ENST00000373867
  gene symbol: FAM13C
  hgvsc: ENST00000373867.3:c.988-36T>C
  variant of: http://identifiers.org/hgnc/19371
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2306
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1322
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1380
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2904
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3271
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1092
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2043
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 863
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8076
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9160
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7432
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5478
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1927
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3623
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7318
  bin: 4.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 440
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1445
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2173
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: Other
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: A
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: MQ

http://identifiers.org/exac.variant/10-61014244-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61014244
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 61014244
    reference: chr 10
allele count: 1
allele frequency: 8.91170284818023e-6
allele num: 112212
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000395661
  ensembl transcript: ENST00000442566
  gene symbol: FAM13C
  hgvsc: ENST00000442566.3:c.1300-41T>G
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362975
  ensembl transcript: ENST00000373868
  gene symbol: FAM13C
  hgvsc: ENST00000373868.2:c.1237-41T>G
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000400241
  ensembl transcript: ENST00000422313
  gene symbol: FAM13C
  hgvsc: ENST00000422313.2:c.1237-41T>G
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl transcript: ENST00000489341
  gene symbol: FAM13C
  hgvsc: ENST00000489341.1:n.142-41T>G
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000424249
  ensembl transcript: ENST00000513059
  gene symbol: FAM13C
  hgvsc: ENST00000513059.1:c.*1169-41T>G
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362974
  ensembl transcript: ENST00000373867
  gene symbol: FAM13C
  hgvsc: ENST00000373867.3:c.988-41T>G
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000277705
  ensembl transcript: ENST00000277705
  gene symbol: FAM13C
  hgvsc: ENST00000277705.6:c.1300-41T>G
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000423896
  ensembl transcript: ENST00000468840
  gene symbol: FAM13C
  hgvsc: ENST00000468840.2:c.988-41T>G
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000391993
  ensembl transcript: ENST00000419214
  gene symbol: FAM13C
  hgvsc: ENST00000419214.2:c.943-41T>G
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000392302
  ensembl transcript: ENST00000435852
  gene symbol: FAM13C
  hgvsc: ENST00000435852.2:c.1237-41T>G
  variant of: http://identifiers.org/hgnc/19371
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1322
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8002
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8693
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5473
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1899
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3271
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3621
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2302
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3053
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1796
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1445
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2106
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7054
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7281
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2074
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 735
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
reference allele: A
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD

10-61014254-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61014254
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 61014254
    reference: chr 10
allele count: 1
allele frequency: 8.991512012660049e-6
allele num: 111216
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000391993
  ensembl transcript: ENST00000419214
  gene symbol: FAM13C
  hgvsc: ENST00000419214.2:c.943-51G>C
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl transcript: ENST00000489341
  gene symbol: FAM13C
  hgvsc: ENST00000489341.1:n.142-51G>C
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000395661
  ensembl transcript: ENST00000442566
  gene symbol: FAM13C
  hgvsc: ENST00000442566.3:c.1300-51G>C
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000400241
  ensembl transcript: ENST00000422313
  gene symbol: FAM13C
  hgvsc: ENST00000422313.2:c.1237-51G>C
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000423896
  ensembl transcript: ENST00000468840
  gene symbol: FAM13C
  hgvsc: ENST00000468840.2:c.988-51G>C
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000424249
  ensembl transcript: ENST00000513059
  gene symbol: FAM13C
  hgvsc: ENST00000513059.1:c.*1169-51G>C
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362975
  ensembl transcript: ENST00000373868
  gene symbol: FAM13C
  hgvsc: ENST00000373868.2:c.1237-51G>C
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000392302
  ensembl transcript: ENST00000435852
  gene symbol: FAM13C
  hgvsc: ENST00000435852.2:c.1237-51G>C
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362974
  ensembl transcript: ENST00000373867
  gene symbol: FAM13C
  hgvsc: ENST00000373867.3:c.988-51G>C
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000277705
  ensembl transcript: ENST00000277705
  gene symbol: FAM13C
  hgvsc: ENST00000277705.6:c.1300-51G>C
  variant of: http://identifiers.org/hgnc/19371
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1997
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4087
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1484
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7251
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7838
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1616
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7538
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3619
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3352
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3271
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6167
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5462
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1322
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2302
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1655
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1726
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1489
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: C
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum

10-61014254-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61014254
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 61014254
    reference: chr 10
allele count: 2
allele frequency: 1.79830240253201e-5
allele num: 111216
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000423896
  ensembl transcript: ENST00000468840
  gene symbol: FAM13C
  hgvsc: ENST00000468840.2:c.988-51G>A
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000277705
  ensembl transcript: ENST00000277705
  gene symbol: FAM13C
  hgvsc: ENST00000277705.6:c.1300-51G>A
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl transcript: ENST00000489341
  gene symbol: FAM13C
  hgvsc: ENST00000489341.1:n.142-51G>A
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000392302
  ensembl transcript: ENST00000435852
  gene symbol: FAM13C
  hgvsc: ENST00000435852.2:c.1237-51G>A
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000400241
  ensembl transcript: ENST00000422313
  gene symbol: FAM13C
  hgvsc: ENST00000422313.2:c.1237-51G>A
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000391993
  ensembl transcript: ENST00000419214
  gene symbol: FAM13C
  hgvsc: ENST00000419214.2:c.943-51G>A
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000395661
  ensembl transcript: ENST00000442566
  gene symbol: FAM13C
  hgvsc: ENST00000442566.3:c.1300-51G>A
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362975
  ensembl transcript: ENST00000373868
  gene symbol: FAM13C
  hgvsc: ENST00000373868.2:c.1237-51G>A
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362974
  ensembl transcript: ENST00000373867
  gene symbol: FAM13C
  hgvsc: ENST00000373867.3:c.988-51G>A
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000424249
  ensembl transcript: ENST00000513059
  gene symbol: FAM13C
  hgvsc: ENST00000513059.1:c.*1169-51G>A
  variant of: http://identifiers.org/hgnc/19371
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1616
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5462
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1322
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4087
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3352
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6167
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7538
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7838
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1484
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2302
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3619
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7251
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3271
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1997
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 672
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 300
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1726
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD

10-61014255-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61014255
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 61014255
    reference: chr 10
allele count: 4
allele frequency: 3.598869954834182e-5
allele num: 111146
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000424249
  ensembl transcript: ENST00000513059
  gene symbol: FAM13C
  hgvsc: ENST00000513059.1:c.*1169-52C>T
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362975
  ensembl transcript: ENST00000373868
  gene symbol: FAM13C
  hgvsc: ENST00000373868.2:c.1237-52C>T
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl transcript: ENST00000489341
  gene symbol: FAM13C
  hgvsc: ENST00000489341.1:n.142-52C>T
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000395661
  ensembl transcript: ENST00000442566
  gene symbol: FAM13C
  hgvsc: ENST00000442566.3:c.1300-52C>T
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000277705
  ensembl transcript: ENST00000277705
  gene symbol: FAM13C
  hgvsc: ENST00000277705.6:c.1300-52C>T
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000400241
  ensembl transcript: ENST00000422313
  gene symbol: FAM13C
  hgvsc: ENST00000422313.2:c.1237-52C>T
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362974
  ensembl transcript: ENST00000373867
  gene symbol: FAM13C
  hgvsc: ENST00000373867.3:c.988-52C>T
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000423896
  ensembl transcript: ENST00000468840
  gene symbol: FAM13C
  hgvsc: ENST00000468840.2:c.988-52C>T
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000391993
  ensembl transcript: ENST00000419214
  gene symbol: FAM13C
  hgvsc: ENST00000419214.2:c.943-52C>T
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000392302
  ensembl transcript: ENST00000435852
  gene symbol: FAM13C
  hgvsc: ENST00000435852.2:c.1237-52C>T
  variant of: http://identifiers.org/hgnc/19371
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3271
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3346
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7460
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1996
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7805
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1322
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3619
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4126
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1488
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1629
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6231
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 439
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2302
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 544
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 676
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7254
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5459
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1635
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3469
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3839
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
population: Latino
reference allele: G
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: ReadPosRankSum

10-61022163-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 61022163
    reference: chr 10
  end: Position
    type: ExactPosition
    position: 61022163
    reference: chr 10
allele count: 1
allele frequency: 8.346966712296751e-6
allele num: 119804
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000395661
  ensembl transcript: ENST00000442566
  gene symbol: FAM13C
  hgvsc: ENST00000442566.3:c.1299+31C>T
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000423896
  ensembl transcript: ENST00000468840
  gene symbol: FAM13C
  hgvsc: ENST00000468840.2:c.987+31C>T
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000392302
  ensembl transcript: ENST00000435852
  gene symbol: FAM13C
  hgvsc: ENST00000435852.2:c.1236+31C>T
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000424249
  ensembl transcript: ENST00000513059
  gene symbol: FAM13C
  hgvsc: ENST00000513059.1:c.*1168+31C>T
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000400241
  ensembl transcript: ENST00000422313
  gene symbol: FAM13C
  hgvsc: ENST00000422313.2:c.1236+31C>T
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000277705
  ensembl transcript: ENST00000277705
  gene symbol: FAM13C
  hgvsc: ENST00000277705.6:c.1299+31C>T
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362974
  ensembl transcript: ENST00000373867
  gene symbol: FAM13C
  hgvsc: ENST00000373867.3:c.987+31C>T
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl transcript: ENST00000489341
  gene symbol: FAM13C
  hgvsc: ENST00000489341.1:n.142-7960C>T
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000362975
  ensembl transcript: ENST00000373868
  gene symbol: FAM13C
  hgvsc: ENST00000373868.2:c.1236+31C>T
  variant of: http://identifiers.org/hgnc/19371
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000148541
  ensembl protein: ENSP00000391993
  ensembl transcript: ENST00000419214
  gene symbol: FAM13C
  hgvsc: ENST00000419214.2:c.942+6150C>T
  variant of: http://identifiers.org/hgnc/19371
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 643
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1816
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6762
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22462
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1159
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1728
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23045
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 420
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 265
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1001
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 435
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 803
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 293
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: Other
population: South Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum

GenotypeQuality
all individuals: 94
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 78
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 25808
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3371
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2207
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8239
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 211
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1581
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 377
bin: 2.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66368
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11430
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 2.889060092449923e-4
allele num: 10384
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16444
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8580
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6576
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.98e-1

QD
type: SiteQuality
SIO_000300: 1.319e1

VQSLOD
type: SiteQuality
SIO_000300: 1.09e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.5e-2

MQ
type: SiteQuality
SIO_000300: 5.968e1

FS
type: SiteQuality
SIO_000300: 4.275e0

MQRankSum
type: SiteQuality
SIO_000300: 1.17e-1

DP
type: SiteQuality
SIO_000300: 1.950943e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.48e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -2.493e0

GenotypeQuality
all individuals: 22
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26556
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3493
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4760
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3405
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8350
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2216
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10069
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 22
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11500
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.06134076857801e-5
allele num: 16498
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66650
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.973e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.93e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.75e-1

QD
type: SiteQuality
SIO_000300: 1.831e1

VQSLOD
type: SiteQuality
SIO_000300: -6.689000000000001e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.18e-1

FS
type: SiteQuality
SIO_000300: 5.9e-1

DP
type: SiteQuality
SIO_000300: 1.963393e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.325e0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2216
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3495
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3413
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 22
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8362
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4764
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1591
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10071
bin: 9.75e1
variant carriers: 2

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11512
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16500
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66668
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.92270717169775e-4
allele num: 10402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.963939e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.22e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.42e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.917e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 2.589e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.01e0

QD
type: SiteQuality
SIO_000300: 1.27e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.7e0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3491
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3409
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1590
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 26612
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4764
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2216
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10070
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 8359
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8634
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.613535858488752e-5
allele num: 10402
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11514
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16502
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.499700059988002e-5
allele num: 66680
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.81e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -4.431e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.81e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -2.08e-1

FS
type: SiteQuality
SIO_000300: 1.679e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.3e-2

QD
type: SiteQuality
SIO_000300: 1.203e1

DP
type: SiteQuality
SIO_000300: 1.964478e6

GenotypeQuality
all individuals: 8
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1593
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4764
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8367
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26685
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2216
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10071
bin: 9.75e1
variant carriers: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498845888665727e-5
allele num: 66718
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11538
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.35e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 3.064e0

VQSLOD
type: SiteQuality
SIO_000300: -8.85e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.535e0

MQ
type: SiteQuality
SIO_000300: 5.978e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.996e0

DP
type: SiteQuality
SIO_000300: 1.965987e6

QD
type: SiteQuality
SIO_000300: 1.357e1

MQRankSum
type: SiteQuality
SIO_000300: -1.107e0

GenotypeQuality
all individuals: 8
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1590
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 37
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3491
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8367
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3415
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26688
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2214
bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 2.997512064986062e-5
allele num: 66722
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

African
type: Population
allele count: 25
allele frequency: 2.402921953094963e-3
allele num: 10404
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.05766900896535e-5
allele num: 16508
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.61e-1

QD
type: SiteQuality
SIO_000300: 1.26e1

VQSLOD
type: SiteQuality
SIO_000300: 5.83e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.886e0

DP
type: SiteQuality
SIO_000300: 1.968181e6

MQRankSum
type: SiteQuality
SIO_000300: 9.7e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.84e-1

MQ
type: SiteQuality
SIO_000300: 5.969e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

GenotypeQuality
all individuals: 3491
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 26688
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 8
bin: 2.75e1
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GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3415
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

African
type: Population
allele count: 5
allele frequency: 4.805843906189927e-4
allele num: 10404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11546
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16508
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66722
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 5.83e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.886e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.61e-1

MQ
type: SiteQuality
SIO_000300: 5.969e1

MQRankSum
type: SiteQuality
SIO_000300: 9.7e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

QD
type: SiteQuality
SIO_000300: 1.26e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.968181e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.84e-1

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
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GenotypeQuality
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GenotypeQuality
all individuals: 7
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3418
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10073
bin: 9.75e1
variant carriers: 10

African
type: Population
allele count: 9
allele frequency: 8.648856428983279e-4
allele num: 10406
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11548
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66724
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.058403004967891e-5
allele num: 16506
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.967145e6

MQ
type: SiteQuality
SIO_000300: 5.976e1

FS
type: SiteQuality
SIO_000300: 7.407e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.36e-2

MQRankSum
type: SiteQuality
SIO_000300: -3.33e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.04e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.931e0

VQSLOD
type: SiteQuality
SIO_000300: 1.33e0

QD
type: SiteQuality
SIO_000300: 1.196e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.41e-1

GenotypeQuality
all individuals: 4
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10076
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variant carriers: 14

GenotypeQuality
all individuals: 5
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variant carriers: 0

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
all individuals: 1591
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variant carriers: 0

GenotypeQuality
all individuals: 0
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variant carriers: 0

GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 2216
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GenotypeQuality
all individuals: 8373
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variant carriers: 0

GenotypeQuality
all individuals: 3417
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variant carriers: 0

GenotypeQuality
all individuals: 6
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variant carriers: 0

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
all individuals: 3495
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4764
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 13
allele frequency: 1.948266043221533e-4
allele num: 66726
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.31e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.31e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.957e1

QD
type: SiteQuality
SIO_000300: 1.472e1

DP
type: SiteQuality
SIO_000300: 1.968363e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.2e-3

MQRankSum
type: SiteQuality
SIO_000300: 3.52e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.12e0

VQSLOD
type: SiteQuality
SIO_000300: 5.56e0

GenotypeQuality
all individuals: 3
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4764
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 6
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GenotypeQuality
all individuals: 4
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GenotypeQuality
all individuals: 5
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GenotypeQuality
all individuals: 8373
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variant carriers: 0

GenotypeQuality
all individuals: 10076
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GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
all individuals: 4
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variant carriers: 0

GenotypeQuality
all individuals: 18
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variant carriers: 0

GenotypeQuality
all individuals: 6
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variant carriers: 0

GenotypeQuality
all individuals: 2216
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3417
bin: 7.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11560
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66726
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.056935190793458e-5
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.31e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.12e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.31e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.56e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.2e-3

MQRankSum
type: SiteQuality
SIO_000300: 3.52e-1

QD
type: SiteQuality
SIO_000300: 1.472e1

DP
type: SiteQuality
SIO_000300: 1.968363e6

MQ
type: SiteQuality
SIO_000300: 5.957e1

GenotypeQuality
all individuals: 8374
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3493
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variant carriers: 0

GenotypeQuality
all individuals: 0
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variant carriers: 0

GenotypeQuality
all individuals: 20
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GenotypeQuality
all individuals: 4764
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 3

GenotypeQuality
all individuals: 3
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 5
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GenotypeQuality
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GenotypeQuality
all individuals: 7
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GenotypeQuality
all individuals: 5
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variant carriers: 0

GenotypeQuality
all individuals: 26719
bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66728
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 2.594706798131811e-4
allele num: 11562
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.35e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.589e0

MQ
type: SiteQuality
SIO_000300: 5.965e1

MQRankSum
type: SiteQuality
SIO_000300: 4.93e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.79e-1

QD
type: SiteQuality
SIO_000300: 1.267e1

FS
type: SiteQuality
SIO_000300: 1.32e0

VQSLOD
type: SiteQuality
SIO_000300: 2.48e0

DP
type: SiteQuality
SIO_000300: 1.967617e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.81e-2

GenotypeQuality
all individuals: 4
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 18
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 9
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
all individuals: 2216
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GenotypeQuality
all individuals: 26721
bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11564
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498621268433042e-5
allele num: 66728
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.91e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.64e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.69e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.039e0

FS
type: SiteQuality
SIO_000300: 5.954e0

DP
type: SiteQuality
SIO_000300: 1.967547e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.771e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.23e-2

QD
type: SiteQuality
SIO_000300: 1.136e1

GenotypeQuality
all individuals: 0
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variant carriers: 0

GenotypeQuality
all individuals: 21
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 6
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 8
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498621268433042e-5
allele num: 66728
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.37e-2

MQRankSum
type: SiteQuality
SIO_000300: -1.319e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.639e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.627e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.353e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.4e0

VQSLOD
type: SiteQuality
SIO_000300: -4.881e-1

DP
type: SiteQuality
SIO_000300: 1.967551e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 3495
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 4
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GenotypeQuality
all individuals: 5
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16
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variant carriers: 0

GenotypeQuality
all individuals: 2
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GenotypeQuality
all individuals: 2
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variant carriers: 0

GenotypeQuality
all individuals: 2
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8654
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.498711108446736e-5
allele num: 66724
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16510
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10406
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.42e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.46e0

FS
type: SiteQuality
SIO_000300: 2.475e0

BaseQRankSum
type: SiteQuality
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QD
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ClippingRankSum
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InbreedingCoeff
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MQ
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ReadPosRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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Other
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Latino
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South Asian
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European (Finnish)
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European (Non-Finnish)
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MQRankSum
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MQ
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FS
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DP
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QD
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BaseQRankSum
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VQSLOD
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InbreedingCoeff
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Other
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European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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Latino
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East Asian
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BaseQRankSum
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VQSLOD
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InbreedingCoeff
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FS
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MQ
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ReadPosRankSum
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MQRankSum
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DP
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QD
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele frequency: 0.0e0
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African
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European (Non-Finnish)
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East Asian
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South Asian
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Latino
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Other
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DP
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QD
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FS
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MQRankSum
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ReadPosRankSum
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VQSLOD
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MQ
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ClippingRankSum
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InbreedingCoeff
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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European (Finnish)
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allele frequency: 0.0e0
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Latino
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African
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East Asian
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South Asian
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QD
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BaseQRankSum
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VQSLOD
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ReadPosRankSum
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FS
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ClippingRankSum
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MQRankSum
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MQ
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DP
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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Other
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East Asian
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Latino
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European (Non-Finnish)
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European (Finnish)
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VQSLOD
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BaseQRankSum
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MQ
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QD
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ReadPosRankSum
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FS
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InbreedingCoeff
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ClippingRankSum
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DP
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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African
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East Asian
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Latino
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European (Non-Finnish)
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European (Finnish)
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MQ
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FS
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DP
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MQRankSum
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BaseQRankSum
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ClippingRankSum
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InbreedingCoeff
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ReadPosRankSum
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QD
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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East Asian
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South Asian
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African
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Latino
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European (Non-Finnish)
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MQ
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InbreedingCoeff
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ReadPosRankSum
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VQSLOD
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QD
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DP
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FS
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BaseQRankSum
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ClippingRankSum
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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East Asian
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South Asian
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Latino
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African
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DP
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VQSLOD
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BaseQRankSum
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MQ
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InbreedingCoeff
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FS
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ClippingRankSum
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ReadPosRankSum
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QD
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MQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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Other
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African
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Latino
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East Asian
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European (Non-Finnish)
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ClippingRankSum
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MQRankSum
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InbreedingCoeff
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FS
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VQSLOD
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ReadPosRankSum
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MQ
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QD
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DP
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BaseQRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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South Asian
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African
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East Asian
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European (Non-Finnish)
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Latino
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MQRankSum
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ClippingRankSum
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MQ
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DP
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ReadPosRankSum
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VQSLOD
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InbreedingCoeff
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FS
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Other
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Latino
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African
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European (Non-Finnish)
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East Asian
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QD
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VQSLOD
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InbreedingCoeff
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ClippingRankSum
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BaseQRankSum
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MQRankSum
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MQ
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DP
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ReadPosRankSum
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FS
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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South Asian
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East Asian
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European (Non-Finnish)
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African
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Latino
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Other
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MQRankSum
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FS
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ReadPosRankSum
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InbreedingCoeff
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ClippingRankSum
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MQ
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BaseQRankSum
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DP
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VQSLOD
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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East Asian
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European (Non-Finnish)
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African
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South Asian
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Other
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ClippingRankSum
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FS
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QD
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VQSLOD
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DP
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BaseQRankSum
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ReadPosRankSum
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MQ
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MQRankSum
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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Latino
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European (Finnish)
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South Asian
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European (Non-Finnish)
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ClippingRankSum
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VQSLOD
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DP
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MQRankSum
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InbreedingCoeff
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MQ
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FS
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QD
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BaseQRankSum
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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European (Finnish)
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African
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South Asian
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East Asian
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Other
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VQSLOD
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MQRankSum
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InbreedingCoeff
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FS
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BaseQRankSum
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QD
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ClippingRankSum
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ReadPosRankSum
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MQ
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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South Asian
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European (Non-Finnish)
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East Asian
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Latino
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European (Finnish)
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VQSLOD
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QD
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ClippingRankSum
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MQ
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MQRankSum
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BaseQRankSum
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FS
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InbreedingCoeff
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DP
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

African
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allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.674531575294934e-5
allele num: 11528
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.500105007350515e-5
allele num: 66662
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

DP
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BaseQRankSum
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
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ClippingRankSum
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SIO_000300: -6.75e-1

VQSLOD
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QD
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FS
type: SiteQuality
SIO_000300: 3.862e0

MQ
type: SiteQuality
SIO_000300: 5.571e1

MQRankSum
type: SiteQuality
SIO_000300: -1.615e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8628
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11520
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

European (Non-Finnish)
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allele count: 2
allele frequency: 3.001200480192077e-5
allele num: 66640
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.95932e6

ReadPosRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: -4.68e-1

MQRankSum
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FS
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SIO_000300: 2.717e0

QD
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VQSLOD
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InbreedingCoeff
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SIO_000300: 9.0e-4

MQ
type: SiteQuality
SIO_000300: 6.001e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.82e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16482
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11520
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.160092807424594e-4
allele num: 8620
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66624
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
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SIO_000300: -1.875e0

FS
type: SiteQuality
SIO_000300: 1.861e0

ReadPosRankSum
type: SiteQuality
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BaseQRankSum
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SIO_000300: -5.152e0

QD
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SIO_000300: 1.08e1

VQSLOD
type: SiteQuality
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InbreedingCoeff
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SIO_000300: 1.9e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -9.31e-1

DP
type: SiteQuality
SIO_000300: 1.955114e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11514
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500915558490679e-5
allele num: 66626
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10388
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.91e-1

MQ
type: SiteQuality
SIO_000300: 5.969e1

MQRankSum
type: SiteQuality
SIO_000300: -1.279e0

QD
type: SiteQuality
SIO_000300: 2.06e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 2.0e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.44e0

FS
type: SiteQuality
SIO_000300: 1.1044e1

VQSLOD
type: SiteQuality
SIO_000300: -1.618e0

DP
type: SiteQuality
SIO_000300: 1.951757e6

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.500960614793468e-5
allele num: 66624
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16486
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10388
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11520
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.47e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.25e0

QD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.951732e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.77e0

ReadPosRankSum
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SIO_000300: -1.509e0

FS
type: SiteQuality
SIO_000300: 3.033e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

MQ
type: SiteQuality
SIO_000300: 5.788e1

MQRankSum
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SIO_000300: -5.5e-1

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66436
num of homozygotes: 0

East Asian
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allele num: 8534
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
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FS
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ClippingRankSum
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VQSLOD
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MQ
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DP
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BaseQRankSum
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QD
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MQRankSum
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ReadPosRankSum
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
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allele count: 0
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num of homozygotes: 0

African
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Latino
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European (Finnish)
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European (Non-Finnish)
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allele num: 63172
num of homozygotes: 0

South Asian
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Other
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FS
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MQ
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InbreedingCoeff
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QD
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MQRankSum
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ClippingRankSum
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ReadPosRankSum
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BaseQRankSum
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DP
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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East Asian
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South Asian
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Other
type: Population
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Latino
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European (Finnish)
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European (Non-Finnish)
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BaseQRankSum
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VQSLOD
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InbreedingCoeff
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ReadPosRankSum
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ClippingRankSum
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FS
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QD
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MQ
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MQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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num of homozygotes: 0

East Asian
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Other
type: Population
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6550
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Latino
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allele frequency: 0.0e0
allele num: 11272
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10120
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.71e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.12e0

MQRankSum
type: SiteQuality
SIO_000300: -2.02e0

MQ
type: SiteQuality
SIO_000300: 5.708e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.06e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.17e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

DP
type: SiteQuality
SIO_000300: 2.048958e6

QD
type: SiteQuality
SIO_000300: 2.299e1

GenotypeQuality
all individuals: 2934
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3044
bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5909
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 922
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15890
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2097
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8370
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 816
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6558
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.569809425135789e-5
allele num: 63702
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11314
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10174
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10762
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.17e-1

DP
type: SiteQuality
SIO_000300: 2.070775e6

MQRankSum
type: SiteQuality
SIO_000300: 9.67e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.71e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

MQ
type: SiteQuality
SIO_000300: 5.961e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.14e0

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.485e1

VQSLOD
type: SiteQuality
SIO_000300: 6.7e-1

GenotypeQuality
all individuals: 742
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 255
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 188
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2936
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63748
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 816
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10174
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.833922261484099e-5
allele num: 11320
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10732
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6562
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8398
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.1e0

QD
type: SiteQuality
SIO_000300: 2.003e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.34e-1

DP
type: SiteQuality
SIO_000300: 2.074622e6

MQRankSum
type: SiteQuality
SIO_000300: -1.0e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.031e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.358e0

GenotypeQuality
all individuals: 845
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 89
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3063
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variant carriers: 0

GenotypeQuality
all individuals: 729
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 240
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3651
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 15907
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4238
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4668
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6562
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 816
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.567005139776858e-5
allele num: 63816
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8416
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11332
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10190
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10830
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 5.58e0

BaseQRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.973e1

VQSLOD
type: SiteQuality
SIO_000300: 3.11e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.5e-3

MQRankSum
type: SiteQuality
SIO_000300: -6.94e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.85e-1

DP
type: SiteQuality
SIO_000300: 2.077228e6

GenotypeQuality
all individuals: 4287
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6021
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 495
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3104
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 346
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 173
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2150
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 639
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2980
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 60
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15933
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 168
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4716
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3580
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 707
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 15042
bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10972
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8502
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.560257130375086e-5
allele num: 64092
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10218
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 818
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11360
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6566
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.02e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.66e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.36e0

DP
type: SiteQuality
SIO_000300: 2.088011e6

QD
type: SiteQuality
SIO_000300: 1.551e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.659999999999999e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.39e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 42
bin: 1.25e1
variant carriers: 39

GenotypeQuality
all individuals: 1104
bin: 6.25e1
variant carriers: 291

GenotypeQuality
all individuals: 120
bin: 2.5e0
variant carriers: 10

GenotypeQuality
all individuals: 53512
bin: 9.75e1
variant carriers: 52789

GenotypeQuality
all individuals: 450
bin: 2.25e1
variant carriers: 227

GenotypeQuality
all individuals: 127
bin: 1.75e1
variant carriers: 109

GenotypeQuality
all individuals: 523
bin: 8.25e1
variant carriers: 335

GenotypeQuality
all individuals: 547
bin: 6.75e1
variant carriers: 272

GenotypeQuality
all individuals: 466
bin: 7.75e1
variant carriers: 260

GenotypeQuality
all individuals: 52
bin: 7.5e0
variant carriers: 24

GenotypeQuality
all individuals: 305
bin: 7.25e1
variant carriers: 158

GenotypeQuality
all individuals: 431
bin: 5.25e1
variant carriers: 418

GenotypeQuality
all individuals: 538
bin: 4.75e1
variant carriers: 527

GenotypeQuality
all individuals: 484
bin: 9.25e1
variant carriers: 353

GenotypeQuality
all individuals: 303
bin: 8.75e1
variant carriers: 213

GenotypeQuality
all individuals: 197
bin: 5.75e1
variant carriers: 187

GenotypeQuality
all individuals: 235
bin: 2.75e1
variant carriers: 188

European (Finnish)
type: Population
allele count: 5902
allele frequency: 8.934302149561005e-1
allele num: 6606
num of homozygotes: 2643

Latino
type: Population
allele count: 9942
allele frequency: 8.643714136671883e-1
allele num: 11502
num of homozygotes: 4298

European (Non-Finnish)
type: Population
allele count: 55906
allele frequency: 8.463681230508372e-1
allele num: 66054
num of homozygotes: 23595

African
type: Population
allele count: 5168
allele frequency: 4.998065764023211e-1
allele num: 10340
num of homozygotes: 1311

Other
type: Population
allele count: 735
allele frequency: 8.239910313901345e-1
allele num: 892
num of homozygotes: 302

East Asian
type: Population
allele count: 7844
allele frequency: 9.076602638278176e-1
allele num: 8642
num of homozygotes: 3565

South Asian
type: Population
allele count: 10934
allele frequency: 7.336285560923242e-1
allele num: 14904
num of homozygotes: 3969

BaseQRankSum
type: SiteQuality
SIO_000300: -7.22e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.2e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.22e-2

QD
type: SiteQuality
SIO_000300: 3.082e1

MQRankSum
type: SiteQuality
SIO_000300: 5.5e-2

DP
type: SiteQuality
SIO_000300: 3.999783e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.41e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.53e-1

MQ
type: SiteQuality
SIO_000300: 5.988e1

GenotypeQuality
all individuals: 510
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10452
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3868
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
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GenotypeQuality
all individuals: 258
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variant carriers: 0

GenotypeQuality
all individuals: 151
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variant carriers: 0

GenotypeQuality
all individuals: 485
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variant carriers: 0

GenotypeQuality
all individuals: 108
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GenotypeQuality
all individuals: 2277
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variant carriers: 0

GenotypeQuality
all individuals: 65
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variant carriers: 0

GenotypeQuality
all individuals: 91
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variant carriers: 0

GenotypeQuality
all individuals: 853
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3830
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 25197
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 2086
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 795
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4608
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157139551029854e-4
allele num: 8642
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66136
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.669334400426837e-5
allele num: 14994
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10360
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.658986e6

QD
type: SiteQuality
SIO_000300: 1.252e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.14e0

VQSLOD
type: SiteQuality
SIO_000300: 6.76e-1

FS
type: SiteQuality
SIO_000300: 6.62e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.62e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.999999999999999e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 7.9e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.06e-1

GenotypeQuality
all individuals: 82
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1113
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
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variant carriers: 0

GenotypeQuality
all individuals: 47
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variant carriers: 0

GenotypeQuality
all individuals: 732
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3829
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 371
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 821
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25194
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 462
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variant carriers: 0

GenotypeQuality
all individuals: 2270
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GenotypeQuality
all individuals: 4626
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GenotypeQuality
all individuals: 54
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GenotypeQuality
all individuals: 292
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GenotypeQuality
all individuals: 3863
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variant carriers: 0

GenotypeQuality
all individuals: 11023
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2085
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11530
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.511441613010489e-5
allele num: 66162
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10364
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15092
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.093e1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.877e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.46e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.81e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.8e-3

DP
type: SiteQuality
SIO_000300: 2.662226e6

FS
type: SiteQuality
SIO_000300: 6.503e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.08e0

MQ
type: SiteQuality
SIO_000300: 5.976e1

VQSLOD
type: SiteQuality
SIO_000300: 6.909999999999999e-1

GenotypeQuality
all individuals: 3632
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 801
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 79
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11265
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1086
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 247
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 71
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 294
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 687
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2085
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4632
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3831
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3865
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2270
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25189
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 101
bin: 5.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11532
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 890
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15142
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.511395925276585e-5
allele num: 66164
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -3.16e-1

FS
type: SiteQuality
SIO_000300: 1.622e0

InbreedingCoeff
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SIO_000300: -5.999999999999999e-4

DP
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SIO_000300: 2.664151e6

ReadPosRankSum
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SIO_000300: 2.17e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.9e-2

VQSLOD
type: SiteQuality
SIO_000300: 9.8e-1

MQ
type: SiteQuality
SIO_000300: 5.975e1

QD
type: SiteQuality
SIO_000300: 1.492e1

BaseQRankSum
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SIO_000300: -5.099e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
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allele count: 1
allele frequency: 1.511121856866538e-5
allele num: 66176
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10368
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11536
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
allele num: 15172
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ClippingRankSum
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QD
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BaseQRankSum
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VQSLOD
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FS
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SIO_000300: 2.356e0

ReadPosRankSum
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DP
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MQ
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SIO_000300: 5.948e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -5.48e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 66224
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15344
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

African
type: Population
allele count: 7
allele frequency: 6.739842095128057e-4
allele num: 10386
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11542
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 9.08e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.27e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.23e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

DP
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SIO_000300: 2.674774e6

ReadPosRankSum
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SIO_000300: 3.74e-1

QD
type: SiteQuality
SIO_000300: 1.697e1

MQRankSum
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SIO_000300: -1.92e0

MQ
type: SiteQuality
SIO_000300: 5.595e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.46e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15862
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.505162708088744e-5
allele num: 66438
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.658008658008658e-5
allele num: 11550
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.46e-1

FS
type: SiteQuality
SIO_000300: 3.029e0

QD
type: SiteQuality
SIO_000300: 1.545e1

MQRankSum
type: SiteQuality
SIO_000300: 7.91e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.59e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.23e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 5.96e-1

DP
type: SiteQuality
SIO_000300: 2.693787e6

MQ
type: SiteQuality
SIO_000300: 5.941e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8650
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11558
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.503668952243474e-5
allele num: 66504
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.57e0

VQSLOD
type: SiteQuality
SIO_000300: 5.34e-1

MQRankSum
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MQ
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SIO_000300: 6.0e1

ReadPosRankSum
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ClippingRankSum
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DP
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InbreedingCoeff
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SIO_000300: 1.61e-2

QD
type: SiteQuality
SIO_000300: 1.161e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 10402
num of homozygotes: 0

South Asian
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allele count: 10
allele frequency: 6.196554715578138e-4
allele num: 16138
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 4.959870141581748e-4
allele num: 66534
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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East Asian
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Latino
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allele frequency: 8.650519031141868e-5
allele num: 11560
num of homozygotes: 0

Other
type: Population
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allele num: 906
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BaseQRankSum
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MQRankSum
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VQSLOD
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MQ
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FS
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ReadPosRankSum
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InbreedingCoeff
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QD
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ClippingRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
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South Asian
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allele frequency: 6.196554715578138e-5
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European (Non-Finnish)
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allele frequency: 0.0e0
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Other
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Latino
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African
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BaseQRankSum
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MQ
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FS
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DP
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MQRankSum
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ReadPosRankSum
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VQSLOD
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ClippingRankSum
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QD
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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num of homozygotes: 0

South Asian
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European (Finnish)
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allele count: 0
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Other
type: Population
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African
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allele frequency: 9.611687812379854e-5
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East Asian
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European (Non-Finnish)
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allele count: 0
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BaseQRankSum
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DP
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MQRankSum
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ClippingRankSum
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ReadPosRankSum
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VQSLOD
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FS
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QD
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MQ
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InbreedingCoeff
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 10

GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.277465508431272e-4
allele num: 15656
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.055170334639735e-4
allele num: 66340
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.650519031141868e-5
allele num: 11560
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.690638e6

MQ
type: SiteQuality
SIO_000300: 5.952e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.31e0

VQSLOD
type: SiteQuality
SIO_000300: 1.64e0

QD
type: SiteQuality
SIO_000300: 8.93e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 6.37e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.81e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.55e-1

GenotypeQuality
all individuals: 23
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10390
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66260
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.464959917248513e-5
allele num: 15468
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.927e1

FS
type: SiteQuality
SIO_000300: 4.02e-1

DP
type: SiteQuality
SIO_000300: 2.685027e6

VQSLOD
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SIO_000300: -8.146e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.933e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.313e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.13e0

MQRankSum
type: SiteQuality
SIO_000300: 1.27e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.07e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11556
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66192
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 1.925669170036588e-4
allele num: 10386
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15252
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.404e0

DP
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SIO_000300: 2.680432e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.18e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.02e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.58e-1

FS
type: SiteQuality
SIO_000300: 1.2e0

MQ
type: SiteQuality
SIO_000300: 5.954e1

MQRankSum
type: SiteQuality
SIO_000300: 8.58e-1

QD
type: SiteQuality
SIO_000300: 1.205e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11554
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10384
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66140
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.605892456070815e-5
allele num: 15138
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.06e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.100000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

FS
type: SiteQuality
SIO_000300: 2.222e0

MQ
type: SiteQuality
SIO_000300: 5.94e1

MQRankSum
type: SiteQuality
SIO_000300: -1.087e0

QD
type: SiteQuality
SIO_000300: 1.279e1

DP
type: SiteQuality
SIO_000300: 2.677663e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.71e-1

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 4527
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11492
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8606
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12762
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 850
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10304
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6598
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.533272002453235e-5
allele num: 65220
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -6.8e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -3.59e-1

MQ
type: SiteQuality
SIO_000300: 5.966e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.0e-4

DP
type: SiteQuality
SIO_000300: 2.633981e6

VQSLOD
type: SiteQuality
SIO_000300: 8.6e-1

FS
type: SiteQuality
SIO_000300: 5.769e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.25e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.53e-1

QD
type: SiteQuality
SIO_000300: 1.163e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.323420074349442e-4
allele num: 8608
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 848
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11488
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10304
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65168
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12626
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.36e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.56e-1

MQ
type: SiteQuality
SIO_000300: 5.974e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.815e0

DP
type: SiteQuality
SIO_000300: 2.630953e6

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.4e-3

QD
type: SiteQuality
SIO_000300: 1.114e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.53e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 5

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64722
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11466
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10252
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 832
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 3.432297923459756e-4
allele num: 11654
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.97e1

MQRankSum
type: SiteQuality
SIO_000300: 1.46e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

ClippingRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
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BaseQRankSum
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SIO_000300: 2.22e0

DP
type: SiteQuality
SIO_000300: 2.61737e6

FS
type: SiteQuality
SIO_000300: 6.661e0

VQSLOD
type: SiteQuality
SIO_000300: 7.35e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

Other
type: Population
allele count: 1
allele frequency: 1.204819277108434e-3
allele num: 830
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

European (Non-Finnish)
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allele count: 4
allele frequency: 6.195978809752471e-5
allele num: 64558
num of homozygotes: 0

African
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allele frequency: 0.0e0
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8556
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11200
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11446
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.64e-1

MQ
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 2.068e0

VQSLOD
type: SiteQuality
SIO_000300: 3.26e0

DP
type: SiteQuality
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InbreedingCoeff
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SIO_000300: 8.0e-4

BaseQRankSum
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SIO_000300: 1.85e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.81e-1

ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.746e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6576
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10844
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.171508903467666e-4
allele num: 8536
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11434
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10226
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64392
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 818
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 3.006e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.5e-1

VQSLOD
type: SiteQuality
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DP
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SIO_000300: 2.592953e6

MQRankSum
type: SiteQuality
SIO_000300: -2.47e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -3.303e0

QD
type: SiteQuality
SIO_000300: 1.599e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.7e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 14

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11426
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.788566953797964e-5
allele num: 10216
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 820
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10690
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8524
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 13
allele frequency: 2.021395695982087e-4
allele num: 64312
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.583139e6

VQSLOD
type: SiteQuality
SIO_000300: 2.27e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -3.32e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.43e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.48e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.533e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.9e-1

MQ
type: SiteQuality
SIO_000300: 5.981e1

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 816
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8498
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64200
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10490
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.788566953797964e-5
allele num: 10216
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11414
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -6.919e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -5.845e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.66e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.728e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.21e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

DP
type: SiteQuality
SIO_000300: 2.567871e6

QD
type: SiteQuality
SIO_000300: 1.464e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10138
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.188777936281503e-4
allele num: 8412
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11390
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6564
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63854
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 810
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10048
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.77e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.8e-1

QD
type: SiteQuality
SIO_000300: 1.331e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 2.544625e6

MQRankSum
type: SiteQuality
SIO_000300: 8.8e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.52e0

VQSLOD
type: SiteQuality
SIO_000300: 4.56e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.9e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -4.7e-2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6564
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8412
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11390
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10138
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.132145206251762e-5
allele num: 63854
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10048
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 810
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 8.8e-1

DP
type: SiteQuality
SIO_000300: 2.544625e6

QD
type: SiteQuality
SIO_000300: 1.331e1

FS
type: SiteQuality
SIO_000300: 6.77e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.9e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.8e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.7e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 2.52e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 4.56e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.18962645729241e-4
allele num: 8406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6564
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63834
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 812
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.966115208291808e-5
allele num: 10034
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10116
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.757469244288225e-4
allele num: 11380
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.543508e6

VQSLOD
type: SiteQuality
SIO_000300: 5.05e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.96e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.9e-3

BaseQRankSum
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MQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.572e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.14e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8492
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11240
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16376
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6516
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.515932450050026e-5
allele num: 65966
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.47e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: 7.33e-1

FS
type: SiteQuality
SIO_000300: 2.254e0

VQSLOD
type: SiteQuality
SIO_000300: 9.14e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.46e0