7-104715270-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 104715270
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 104715270
    reference: chr 7
allele count: 1
allele frequency: 9.60208941465663e-6
allele num: 104144
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335599
  ensembl transcript: ENST00000334877
  gene symbol: KMT2E
  hgvsc: ENST00000334877.4:c.729+8T>A
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417193
  ensembl transcript: ENST00000482560
  gene symbol: KMT2E
  hgvsc: ENST00000482560.2:c.*383+8T>A
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417888
  ensembl transcript: ENST00000476671
  gene symbol: KMT2E
  hgvsc: ENST00000476671.1:c.729+8T>A
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000333986
  ensembl transcript: ENST00000334914
  gene symbol: KMT2E
  hgvsc: ENST00000334914.7:c.-2107+8T>A
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335398
  ensembl transcript: ENST00000334884
  gene symbol: KMT2E
  hgvsc: ENST00000334884.5:c.729+8T>A
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000257745
  ensembl transcript: ENST00000257745
  gene symbol: KMT2E
  hgvsc: ENST00000257745.4:c.729+8T>A
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000419883
  ensembl transcript: ENST00000478990
  gene symbol: KMT2E
  hgvsc: ENST00000478990.1:c.303+8T>A
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000312379
  ensembl transcript: ENST00000311117
  gene symbol: KMT2E
  hgvsc: ENST00000311117.3:c.729+8T>A
  variant of: http://identifiers.org/hgnc/18541
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 7974
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1210
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5471
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3448
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 737
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7557
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14831
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16764
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 583
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 273
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 429
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2647
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3652
  bin: 3.25e1
  variant carriers: 0
hgvs: c.729+8T>A
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: East Asian
population: Latino
reference allele: T
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: DP

7-104715274-CTTGTTTTTAGGTGAGTGGATAGGATAGCGGATAGGGA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 104715274
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 104715237
    reference: chr 7
allele count: 1
allele frequency: 9.692928039702233e-6
allele num: 103168
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335599
  ensembl transcript: ENST00000334877
  gene symbol: KMT2E
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000419883
  ensembl transcript: ENST00000478990
  gene symbol: KMT2E
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417193
  ensembl transcript: ENST00000482560
  gene symbol: KMT2E
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000312379
  ensembl transcript: ENST00000311117
  gene symbol: KMT2E
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000333986
  ensembl transcript: ENST00000334914
  gene symbol: KMT2E
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417888
  ensembl transcript: ENST00000476671
  gene symbol: KMT2E
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000257745
  ensembl transcript: ENST00000257745
  gene symbol: KMT2E
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335398
  ensembl transcript: ENST00000334884
  gene symbol: KMT2E
  variant of: http://identifiers.org/hgnc/18541
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 4932
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3569
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15435
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7849
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8187
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16123
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1122
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 154
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3448
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 498
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 712
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 400
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 494
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 271
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 255
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1767
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 968
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
population: East Asian
population: European (Finnish)
reference allele: CTTGTTTTTAGGTGAGTGGATAGGATAGCGGATAGGGA
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: MQ

7-104715280-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 104715280
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 104715280
    reference: chr 7
allele count: 1
allele frequency: 9.9657179303197e-6
allele num: 100344
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417888
  ensembl transcript: ENST00000476671
  gene symbol: KMT2E
  hgvsc: ENST00000476671.1:c.729+18T>A
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335398
  ensembl transcript: ENST00000334884
  gene symbol: KMT2E
  hgvsc: ENST00000334884.5:c.729+18T>A
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000312379
  ensembl transcript: ENST00000311117
  gene symbol: KMT2E
  hgvsc: ENST00000311117.3:c.729+18T>A
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417193
  ensembl transcript: ENST00000482560
  gene symbol: KMT2E
  hgvsc: ENST00000482560.2:c.*383+18T>A
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000257745
  ensembl transcript: ENST00000257745
  gene symbol: KMT2E
  hgvsc: ENST00000257745.4:c.729+18T>A
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000333986
  ensembl transcript: ENST00000334914
  gene symbol: KMT2E
  hgvsc: ENST00000334914.7:c.-2107+18T>A
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000419883
  ensembl transcript: ENST00000478990
  gene symbol: KMT2E
  hgvsc: ENST00000478990.1:c.303+18T>A
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335599
  ensembl transcript: ENST00000334877
  gene symbol: KMT2E
  hgvsc: ENST00000334877.4:c.729+18T>A
  variant of: http://identifiers.org/hgnc/18541
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12130
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 982
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7655
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1201
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3365
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18795
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8930
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4947
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 145
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 741
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 571
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 778
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 370
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18429
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 577
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5210
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD

7-104715291-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 104715291
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 104715291
    reference: chr 7
allele count: 1
allele frequency: 1.038961038961039e-5
allele num: 96250
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000257745
  ensembl transcript: ENST00000257745
  gene symbol: KMT2E
  hgvsc: ENST00000257745.4:c.729+29G>C
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417888
  ensembl transcript: ENST00000476671
  gene symbol: KMT2E
  hgvsc: ENST00000476671.1:c.729+29G>C
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417193
  ensembl transcript: ENST00000482560
  gene symbol: KMT2E
  hgvsc: ENST00000482560.2:c.*383+29G>C
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335398
  ensembl transcript: ENST00000334884
  gene symbol: KMT2E
  hgvsc: ENST00000334884.5:c.729+29G>C
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335599
  ensembl transcript: ENST00000334877
  gene symbol: KMT2E
  hgvsc: ENST00000334877.4:c.729+29G>C
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000312379
  ensembl transcript: ENST00000311117
  gene symbol: KMT2E
  hgvsc: ENST00000311117.3:c.729+29G>C
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000333986
  ensembl transcript: ENST00000334914
  gene symbol: KMT2E
  hgvsc: ENST00000334914.7:c.-2107+29G>C
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000419883
  ensembl transcript: ENST00000478990
  gene symbol: KMT2E
  hgvsc: ENST00000478990.1:c.303+29G>C
  variant of: http://identifiers.org/hgnc/18541
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5135
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2064
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21984
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2397
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 933
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9878
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8458
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7124
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 914
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1039
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1199
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4532
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 462
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 527
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 269
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
population: Latino
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum

7-104715295-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 104715295
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 104715295
    reference: chr 7
allele count: 1
allele frequency: 1.060490370747434e-5
allele num: 94296
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335398
  ensembl transcript: ENST00000334884
  gene symbol: KMT2E
  hgvsc: ENST00000334884.5:c.729+33A>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000257745
  ensembl transcript: ENST00000257745
  gene symbol: KMT2E
  hgvsc: ENST00000257745.4:c.729+33A>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417888
  ensembl transcript: ENST00000476671
  gene symbol: KMT2E
  hgvsc: ENST00000476671.1:c.729+33A>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000419883
  ensembl transcript: ENST00000478990
  gene symbol: KMT2E
  hgvsc: ENST00000478990.1:c.303+33A>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417193
  ensembl transcript: ENST00000482560
  gene symbol: KMT2E
  hgvsc: ENST00000482560.2:c.*383+33A>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000312379
  ensembl transcript: ENST00000311117
  gene symbol: KMT2E
  hgvsc: ENST00000311117.3:c.729+33A>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335599
  ensembl transcript: ENST00000334877
  gene symbol: KMT2E
  hgvsc: ENST00000334877.4:c.729+33A>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000333986
  ensembl transcript: ENST00000334914
  gene symbol: KMT2E
  hgvsc: ENST00000334914.7:c.-2107+33A>G
  variant of: http://identifiers.org/hgnc/18541
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10555
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2486
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5360
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4160
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2048
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22023
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10449
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1449
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 455
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17813
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1613
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8038
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1277
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: Latino
reference allele: A
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS

7-104715301-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 104715301
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 104715301
    reference: chr 7
allele count: 1
allele frequency: 1.104118361488352e-5
allele num: 90570
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335599
  ensembl transcript: ENST00000334877
  gene symbol: KMT2E
  hgvsc: ENST00000334877.4:c.729+39G>A
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417193
  ensembl transcript: ENST00000482560
  gene symbol: KMT2E
  hgvsc: ENST00000482560.2:c.*383+39G>A
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000312379
  ensembl transcript: ENST00000311117
  gene symbol: KMT2E
  hgvsc: ENST00000311117.3:c.729+39G>A
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335398
  ensembl transcript: ENST00000334884
  gene symbol: KMT2E
  hgvsc: ENST00000334884.5:c.729+39G>A
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000419883
  ensembl transcript: ENST00000478990
  gene symbol: KMT2E
  hgvsc: ENST00000478990.1:c.303+39G>A
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417888
  ensembl transcript: ENST00000476671
  gene symbol: KMT2E
  hgvsc: ENST00000476671.1:c.729+39G>A
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000257745
  ensembl transcript: ENST00000257745
  gene symbol: KMT2E
  hgvsc: ENST00000257745.4:c.729+39G>A
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000333986
  ensembl transcript: ENST00000334914
  gene symbol: KMT2E
  hgvsc: ENST00000334914.7:c.-2107+39G>A
  variant of: http://identifiers.org/hgnc/18541
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 11983
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3900
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1510
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4260
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20814
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 779
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11936
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2786
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2108
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 243
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 408
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3339
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16592
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5967
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5689
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5671
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
reference allele: G
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum

7-104715302-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 104715302
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 104715302
    reference: chr 7
allele count: 14
allele frequency: 1.569190073751934e-4
allele num: 89218
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000312379
  ensembl transcript: ENST00000311117
  gene symbol: KMT2E
  hgvsc: ENST00000311117.3:c.729+40C>T
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000257745
  ensembl transcript: ENST00000257745
  gene symbol: KMT2E
  hgvsc: ENST00000257745.4:c.729+40C>T
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335599
  ensembl transcript: ENST00000334877
  gene symbol: KMT2E
  hgvsc: ENST00000334877.4:c.729+40C>T
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000333986
  ensembl transcript: ENST00000334914
  gene symbol: KMT2E
  hgvsc: ENST00000334914.7:c.-2107+40C>T
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335398
  ensembl transcript: ENST00000334884
  gene symbol: KMT2E
  hgvsc: ENST00000334884.5:c.729+40C>T
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417888
  ensembl transcript: ENST00000476671
  gene symbol: KMT2E
  hgvsc: ENST00000476671.1:c.729+40C>T
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417193
  ensembl transcript: ENST00000482560
  gene symbol: KMT2E
  hgvsc: ENST00000482560.2:c.*383+40C>T
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000419883
  ensembl transcript: ENST00000478990
  gene symbol: KMT2E
  hgvsc: ENST00000478990.1:c.303+40C>T
  variant of: http://identifiers.org/hgnc/18541
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4311
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 461
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1445
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2796
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20573
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12140
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 12285
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 343
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 770
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3638
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 397
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2288
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 292
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2033
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8176
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16112
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2352
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD

7-104715303-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 104715303
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 104715303
    reference: chr 7
allele count: 2
allele frequency: 2.252911888616036e-5
allele num: 88774
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417193
  ensembl transcript: ENST00000482560
  gene symbol: KMT2E
  hgvsc: ENST00000482560.2:c.*383+41G>A
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417888
  ensembl transcript: ENST00000476671
  gene symbol: KMT2E
  hgvsc: ENST00000476671.1:c.729+41G>A
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000312379
  ensembl transcript: ENST00000311117
  gene symbol: KMT2E
  hgvsc: ENST00000311117.3:c.729+41G>A
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335398
  ensembl transcript: ENST00000334884
  gene symbol: KMT2E
  hgvsc: ENST00000334884.5:c.729+41G>A
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000419883
  ensembl transcript: ENST00000478990
  gene symbol: KMT2E
  hgvsc: ENST00000478990.1:c.303+41G>A
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000257745
  ensembl transcript: ENST00000257745
  gene symbol: KMT2E
  hgvsc: ENST00000257745.4:c.729+41G>A
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335599
  ensembl transcript: ENST00000334877
  gene symbol: KMT2E
  hgvsc: ENST00000334877.4:c.729+41G>A
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000333986
  ensembl transcript: ENST00000334914
  gene symbol: KMT2E
  hgvsc: ENST00000334914.7:c.-2107+41G>A
  variant of: http://identifiers.org/hgnc/18541
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4421
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2813
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3450
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12553
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20488
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 561
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1366
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12109
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 393
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 764
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 441
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3401
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16013
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2458
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 275
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2640
  bin: 9.75e1
  variant carriers: 2
num of homozygotes: 0
population: Other
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: G
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD

7-104715307-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 104715307
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 104715307
    reference: chr 7
allele count: 1
allele frequency: 1.148897058823529e-5
allele num: 87040
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335398
  ensembl transcript: ENST00000334884
  gene symbol: KMT2E
  hgvsc: ENST00000334884.5:c.729+45A>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335599
  ensembl transcript: ENST00000334877
  gene symbol: KMT2E
  hgvsc: ENST00000334877.4:c.729+45A>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417193
  ensembl transcript: ENST00000482560
  gene symbol: KMT2E
  hgvsc: ENST00000482560.2:c.*383+45A>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417888
  ensembl transcript: ENST00000476671
  gene symbol: KMT2E
  hgvsc: ENST00000476671.1:c.729+45A>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000257745
  ensembl transcript: ENST00000257745
  gene symbol: KMT2E
  hgvsc: ENST00000257745.4:c.729+45A>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000419883
  ensembl transcript: ENST00000478990
  gene symbol: KMT2E
  hgvsc: ENST00000478990.1:c.303+45A>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000312379
  ensembl transcript: ENST00000311117
  gene symbol: KMT2E
  hgvsc: ENST00000311117.3:c.729+45A>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000333986
  ensembl transcript: ENST00000334914
  gene symbol: KMT2E
  hgvsc: ENST00000334914.7:c.-2107+45A>G
  variant of: http://identifiers.org/hgnc/18541
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13703
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5118
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 753
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2872
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19589
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1243
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2735
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11934
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 344
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1156
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2821
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3482
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1126
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14668
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2638
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2338
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 442
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
reference allele: A
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: MQ
site quality: QD
site quality: VQSLOD

7-104716439-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 104716439
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 104716439
    reference: chr 7
allele count: 1
allele frequency: 9.029508433560877e-6
allele num: 110748
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335398
  ensembl transcript: ENST00000334884
  gene symbol: KMT2E
  hgvsc: ENST00000334884.5:c.730-51A>T
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000312379
  ensembl transcript: ENST00000311117
  gene symbol: KMT2E
  hgvsc: ENST00000311117.3:c.730-51A>T
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000419883
  ensembl transcript: ENST00000478990
  gene symbol: KMT2E
  hgvsc: ENST00000478990.1:c.304-51A>T
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417193
  ensembl transcript: ENST00000482560
  gene symbol: KMT2E
  hgvsc: ENST00000482560.2:c.*384-51A>T
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000257745
  ensembl transcript: ENST00000257745
  gene symbol: KMT2E
  hgvsc: ENST00000257745.4:c.730-51A>T
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417888
  ensembl transcript: ENST00000476671
  gene symbol: KMT2E
  hgvsc: ENST00000476671.1:c.730-51A>T
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335599
  ensembl transcript: ENST00000334877
  gene symbol: KMT2E
  hgvsc: ENST00000334877.4:c.730-51A>T
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000333986
  ensembl transcript: ENST00000334914
  gene symbol: KMT2E
  hgvsc: ENST00000334914.7:c.-2106-51A>T
  variant of: http://identifiers.org/hgnc/18541
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4675
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6538
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2166
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13998
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3720
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9820
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1498
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12876
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1046
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1516
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3495
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1329
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5168
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 314
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9548
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2466
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1323
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: East Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
reference allele: A
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: MQ
site quality: ReadPosRankSum

7-104716449-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 104716449
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 104716449
    reference: chr 7
allele count: 5
allele frequency: 4.479564227991901e-5
allele num: 111618
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000419883
  ensembl transcript: ENST00000478990
  gene symbol: KMT2E
  hgvsc: ENST00000478990.1:c.304-41A>T
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335599
  ensembl transcript: ENST00000334877
  gene symbol: KMT2E
  hgvsc: ENST00000334877.4:c.730-41A>T
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417193
  ensembl transcript: ENST00000482560
  gene symbol: KMT2E
  hgvsc: ENST00000482560.2:c.*384-41A>T
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335398
  ensembl transcript: ENST00000334884
  gene symbol: KMT2E
  hgvsc: ENST00000334884.5:c.730-41A>T
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000333986
  ensembl transcript: ENST00000334914
  gene symbol: KMT2E
  hgvsc: ENST00000334914.7:c.-2106-41A>T
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000257745
  ensembl transcript: ENST00000257745
  gene symbol: KMT2E
  hgvsc: ENST00000257745.4:c.730-41A>T
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417888
  ensembl transcript: ENST00000476671
  gene symbol: KMT2E
  hgvsc: ENST00000476671.1:c.730-41A>T
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000312379
  ensembl transcript: ENST00000311117
  gene symbol: KMT2E
  hgvsc: ENST00000311117.3:c.730-41A>T
  variant of: http://identifiers.org/hgnc/18541
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21090
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1501
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4547
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10555
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7420
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4321
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3863
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2175
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1516
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1045
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 479
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 230
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4385
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1736
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2242
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6770
  bin: 9.75e1
  variant carriers: 5
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
population: African
reference allele: A
site quality: FS
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum

7-104716450-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 104716450
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 104716450
    reference: chr 7
allele count: 1
allele frequency: 8.96426842605375e-6
allele num: 111554
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335398
  ensembl transcript: ENST00000334884
  gene symbol: KMT2E
  hgvsc: ENST00000334884.5:c.730-40G>A
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335599
  ensembl transcript: ENST00000334877
  gene symbol: KMT2E
  hgvsc: ENST00000334877.4:c.730-40G>A
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000257745
  ensembl transcript: ENST00000257745
  gene symbol: KMT2E
  hgvsc: ENST00000257745.4:c.730-40G>A
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000312379
  ensembl transcript: ENST00000311117
  gene symbol: KMT2E
  hgvsc: ENST00000311117.3:c.730-40G>A
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417193
  ensembl transcript: ENST00000482560
  gene symbol: KMT2E
  hgvsc: ENST00000482560.2:c.*384-40G>A
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417888
  ensembl transcript: ENST00000476671
  gene symbol: KMT2E
  hgvsc: ENST00000476671.1:c.730-40G>A
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000419883
  ensembl transcript: ENST00000478990
  gene symbol: KMT2E
  hgvsc: ENST00000478990.1:c.304-40G>A
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000333986
  ensembl transcript: ENST00000334914
  gene symbol: KMT2E
  hgvsc: ENST00000334914.7:c.-2106-40G>A
  variant of: http://identifiers.org/hgnc/18541
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3722
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4499
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7523
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2184
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1044
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22191
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1516
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1502
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9933
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3934
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24802
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1425
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1478
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 218
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1340
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 404
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1330
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
population: European (Finnish)
population: East Asian
population: African
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: ClippingRankSum

7-104716450-G-GT
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 104716450
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 104716451
    reference: chr 7
allele count: 1
allele frequency: 8.96426842605375e-6
allele num: 111554
alternate allele: GT
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335398
  ensembl transcript: ENST00000334884
  gene symbol: KMT2E
  hgvsc: ENST00000334884.5:c.730-34dupT
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000257745
  ensembl transcript: ENST00000257745
  gene symbol: KMT2E
  hgvsc: ENST00000257745.4:c.730-34dupT
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000333986
  ensembl transcript: ENST00000334914
  gene symbol: KMT2E
  hgvsc: ENST00000334914.7:c.-2106-34dupT
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000312379
  ensembl transcript: ENST00000311117
  gene symbol: KMT2E
  hgvsc: ENST00000311117.3:c.730-34dupT
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417193
  ensembl transcript: ENST00000482560
  gene symbol: KMT2E
  hgvsc: ENST00000482560.2:c.*384-34dupT
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335599
  ensembl transcript: ENST00000334877
  gene symbol: KMT2E
  hgvsc: ENST00000334877.4:c.730-34dupT
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417888
  ensembl transcript: ENST00000476671
  gene symbol: KMT2E
  hgvsc: ENST00000476671.1:c.730-34dupT
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000419883
  ensembl transcript: ENST00000478990
  gene symbol: KMT2E
  hgvsc: ENST00000478990.1:c.304-34dupT
  variant of: http://identifiers.org/hgnc/18541
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7523
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3722
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4499
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1516
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2184
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9933
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1502
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1044
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3934
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 22191
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3999
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 404
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1478
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 258
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 653
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4396
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: G
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: QD

7-104716450-GT-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 104716450
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 104716449
    reference: chr 7
allele count: 6
allele frequency: 5.37856105563225e-5
allele num: 111554
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000333986
  ensembl transcript: ENST00000334914
  gene symbol: KMT2E
  hgvsc: ENST00000334914.7:c.-2106-34delT
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417888
  ensembl transcript: ENST00000476671
  gene symbol: KMT2E
  hgvsc: ENST00000476671.1:c.730-34delT
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000312379
  ensembl transcript: ENST00000311117
  gene symbol: KMT2E
  hgvsc: ENST00000311117.3:c.730-34delT
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335599
  ensembl transcript: ENST00000334877
  gene symbol: KMT2E
  hgvsc: ENST00000334877.4:c.730-34delT
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335398
  ensembl transcript: ENST00000334884
  gene symbol: KMT2E
  hgvsc: ENST00000334884.5:c.730-34delT
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000257745
  ensembl transcript: ENST00000257745
  gene symbol: KMT2E
  hgvsc: ENST00000257745.4:c.730-34delT
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417193
  ensembl transcript: ENST00000482560
  gene symbol: KMT2E
  hgvsc: ENST00000482560.2:c.*384-34delT
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000419883
  ensembl transcript: ENST00000478990
  gene symbol: KMT2E
  hgvsc: ENST00000478990.1:c.304-34delT
  variant of: http://identifiers.org/hgnc/18541
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2184
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3722
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 7523
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1044
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1502
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9933
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4499
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 218
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1516
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3934
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 22191
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1340
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4410
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1478
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 258
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1759
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1425
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1330
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: Latino
population: Other
reference allele: GT
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: QD

7-104716458-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 104716458
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 104716458
    reference: chr 7
allele count: 1
allele frequency: 8.818964300832511e-6
allele num: 113392
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335599
  ensembl transcript: ENST00000334877
  gene symbol: KMT2E
  hgvsc: ENST00000334877.4:c.730-32G>A
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000333986
  ensembl transcript: ENST00000334914
  gene symbol: KMT2E
  hgvsc: ENST00000334914.7:c.-2106-32G>A
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417193
  ensembl transcript: ENST00000482560
  gene symbol: KMT2E
  hgvsc: ENST00000482560.2:c.*384-32G>A
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000257745
  ensembl transcript: ENST00000257745
  gene symbol: KMT2E
  hgvsc: ENST00000257745.4:c.730-32G>A
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417888
  ensembl transcript: ENST00000476671
  gene symbol: KMT2E
  hgvsc: ENST00000476671.1:c.730-32G>A
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000419883
  ensembl transcript: ENST00000478990
  gene symbol: KMT2E
  hgvsc: ENST00000478990.1:c.304-32G>A
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000312379
  ensembl transcript: ENST00000311117
  gene symbol: KMT2E
  hgvsc: ENST00000311117.3:c.730-32G>A
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335398
  ensembl transcript: ENST00000334884
  gene symbol: KMT2E
  hgvsc: ENST00000334884.5:c.730-32G>A
  variant of: http://identifiers.org/hgnc/18541
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1504
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8324
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1156
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29539
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2192
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5087
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3767
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1516
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4019
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1045
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1341
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 464
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6771
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 407
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1515
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1390
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3729
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum

7-104716458-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 104716458
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 104716458
    reference: chr 7
allele count: 3
allele frequency: 2.645689290249753e-5
allele num: 113392
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335599
  ensembl transcript: ENST00000334877
  gene symbol: KMT2E
  hgvsc: ENST00000334877.4:c.730-32G>C
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335398
  ensembl transcript: ENST00000334884
  gene symbol: KMT2E
  hgvsc: ENST00000334884.5:c.730-32G>C
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417888
  ensembl transcript: ENST00000476671
  gene symbol: KMT2E
  hgvsc: ENST00000476671.1:c.730-32G>C
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417193
  ensembl transcript: ENST00000482560
  gene symbol: KMT2E
  hgvsc: ENST00000482560.2:c.*384-32G>C
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000419883
  ensembl transcript: ENST00000478990
  gene symbol: KMT2E
  hgvsc: ENST00000478990.1:c.304-32G>C
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000257745
  ensembl transcript: ENST00000257745
  gene symbol: KMT2E
  hgvsc: ENST00000257745.4:c.730-32G>C
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000333986
  ensembl transcript: ENST00000334914
  gene symbol: KMT2E
  hgvsc: ENST00000334914.7:c.-2106-32G>C
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000312379
  ensembl transcript: ENST00000311117
  gene symbol: KMT2E
  hgvsc: ENST00000311117.3:c.730-32G>C
  variant of: http://identifiers.org/hgnc/18541
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1156
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5087
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3767
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29539
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1516
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4019
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8324
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1504
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2192
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1045
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1557
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1801
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6771
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 464
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 290
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1390
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD

7-104716458-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 104716458
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 104716458
    reference: chr 7
allele count: 2
allele frequency: 1.763792860166502e-5
allele num: 113392
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000257745
  ensembl transcript: ENST00000257745
  gene symbol: KMT2E
  hgvsc: ENST00000257745.4:c.730-32G>T
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417193
  ensembl transcript: ENST00000482560
  gene symbol: KMT2E
  hgvsc: ENST00000482560.2:c.*384-32G>T
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000312379
  ensembl transcript: ENST00000311117
  gene symbol: KMT2E
  hgvsc: ENST00000311117.3:c.730-32G>T
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335599
  ensembl transcript: ENST00000334877
  gene symbol: KMT2E
  hgvsc: ENST00000334877.4:c.730-32G>T
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417888
  ensembl transcript: ENST00000476671
  gene symbol: KMT2E
  hgvsc: ENST00000476671.1:c.730-32G>T
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000419883
  ensembl transcript: ENST00000478990
  gene symbol: KMT2E
  hgvsc: ENST00000478990.1:c.304-32G>T
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335398
  ensembl transcript: ENST00000334884
  gene symbol: KMT2E
  hgvsc: ENST00000334884.5:c.730-32G>T
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000333986
  ensembl transcript: ENST00000334914
  gene symbol: KMT2E
  hgvsc: ENST00000334914.7:c.-2106-32G>T
  variant of: http://identifiers.org/hgnc/18541
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4019
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5087
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1156
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2192
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1504
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1045
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3767
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1516
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29539
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8324
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 653
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 407
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1390
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6771
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 917
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1557
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32510
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP

7-104716461-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 104716461
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 104716461
    reference: chr 7
allele count: 34
allele frequency: 2.974055737303406e-4
allele num: 114322
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335599
  ensembl transcript: ENST00000334877
  gene symbol: KMT2E
  hgvsc: ENST00000334877.4:c.730-29A>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335398
  ensembl transcript: ENST00000334884
  gene symbol: KMT2E
  hgvsc: ENST00000334884.5:c.730-29A>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000333986
  ensembl transcript: ENST00000334914
  gene symbol: KMT2E
  hgvsc: ENST00000334914.7:c.-2106-29A>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417193
  ensembl transcript: ENST00000482560
  gene symbol: KMT2E
  hgvsc: ENST00000482560.2:c.*384-29A>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000257745
  ensembl transcript: ENST00000257745
  gene symbol: KMT2E
  hgvsc: ENST00000257745.4:c.730-29A>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417888
  ensembl transcript: ENST00000476671
  gene symbol: KMT2E
  hgvsc: ENST00000476671.1:c.730-29A>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000419883
  ensembl transcript: ENST00000478990
  gene symbol: KMT2E
  hgvsc: ENST00000478990.1:c.304-29A>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000312379
  ensembl transcript: ENST00000311117
  gene symbol: KMT2E
  hgvsc: ENST00000311117.3:c.730-29A>G
  variant of: http://identifiers.org/hgnc/18541
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1042
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3935
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 93
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1505
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8639
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1517
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 3404
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2193
  bin: 3.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 31060
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4032
  bin: 3.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1824
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 273
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1416
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 922
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 310
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4402
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
reference allele: A
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: QD

7-104716476-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 104716476
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 104716476
    reference: chr 7
allele count: 79
allele frequency: 6.702071703683594e-4
allele num: 117874
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000419883
  ensembl transcript: ENST00000478990
  gene symbol: KMT2E
  hgvsc: ENST00000478990.1:c.304-14C>T
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335398
  ensembl transcript: ENST00000334884
  gene symbol: KMT2E
  hgvsc: ENST00000334884.5:c.730-14C>T
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417888
  ensembl transcript: ENST00000476671
  gene symbol: KMT2E
  hgvsc: ENST00000476671.1:c.730-14C>T
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000257745
  ensembl transcript: ENST00000257745
  gene symbol: KMT2E
  hgvsc: ENST00000257745.4:c.730-14C>T
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000333986
  ensembl transcript: ENST00000334914
  gene symbol: KMT2E
  hgvsc: ENST00000334914.7:c.-2106-14C>T
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417193
  ensembl transcript: ENST00000482560
  gene symbol: KMT2E
  hgvsc: ENST00000482560.2:c.*384-14C>T
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000312379
  ensembl transcript: ENST00000311117
  gene symbol: KMT2E
  hgvsc: ENST00000311117.3:c.730-14C>T
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335599
  ensembl transcript: ENST00000334877
  gene symbol: KMT2E
  hgvsc: ENST00000334877.4:c.730-14C>T
  variant of: http://identifiers.org/hgnc/18541
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 1.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 1699
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 2205
  bin: 3.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 35085
  bin: 2.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 1044
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 988
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1507
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9740
  bin: 2.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 5.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1521
  bin: 9.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 4188
  bin: 3.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 246
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1764
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 923
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 660
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1846
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6831
  bin: 9.75e1
  variant carriers: 79
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: East Asian
reference allele: C
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: MQ

http://identifiers.org/exac.variant/7-104716477-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 104716477
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 104716477
    reference: chr 7
allele count: 1
allele frequency: 8.471991595784337e-6
allele num: 118036
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000257745
  ensembl transcript: ENST00000257745
  gene symbol: KMT2E
  hgvsc: ENST00000257745.4:c.730-13A>C
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000419883
  ensembl transcript: ENST00000478990
  gene symbol: KMT2E
  hgvsc: ENST00000478990.1:c.304-13A>C
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417193
  ensembl transcript: ENST00000482560
  gene symbol: KMT2E
  hgvsc: ENST00000482560.2:c.*384-13A>C
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000312379
  ensembl transcript: ENST00000311117
  gene symbol: KMT2E
  hgvsc: ENST00000311117.3:c.730-13A>C
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417888
  ensembl transcript: ENST00000476671
  gene symbol: KMT2E
  hgvsc: ENST00000476671.1:c.730-13A>C
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335398
  ensembl transcript: ENST00000334884
  gene symbol: KMT2E
  hgvsc: ENST00000334884.5:c.730-13A>C
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335599
  ensembl transcript: ENST00000334877
  gene symbol: KMT2E
  hgvsc: ENST00000334877.4:c.730-13A>C
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000333986
  ensembl transcript: ENST00000334914
  gene symbol: KMT2E
  hgvsc: ENST00000334914.7:c.-2106-13A>C
  variant of: http://identifiers.org/hgnc/18541
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4166
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35221
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1625
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1508
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2196
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 917
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1517
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1042
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9809
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 659
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 411
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 349
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39801
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 927
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: QD
site quality: ClippingRankSum

7-104716479-GTTTAT-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 104716479
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 104716474
    reference: chr 7
allele count: 1
allele frequency: 8.452942469273554e-6
allele num: 118302
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417193
  ensembl transcript: ENST00000482560
  gene symbol: KMT2E
  hgvsc: ENST00000482560.2:c.*384-6_*384-2delTTTTA
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000333986
  ensembl transcript: ENST00000334914
  gene symbol: KMT2E
  hgvsc: ENST00000334914.7:c.-2106-6_-2106-2delTTTTA
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000419883
  ensembl transcript: ENST00000478990
  gene symbol: KMT2E
  hgvsc: ENST00000478990.1:c.304-6_304-2delTTTTA
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335599
  ensembl transcript: ENST00000334877
  gene symbol: KMT2E
  hgvsc: ENST00000334877.4:c.730-6_730-2delTTTTA
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335398
  ensembl transcript: ENST00000334884
  gene symbol: KMT2E
  hgvsc: ENST00000334884.5:c.730-6_730-2delTTTTA
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000257745
  ensembl transcript: ENST00000257745
  gene symbol: KMT2E
  hgvsc: ENST00000257745.4:c.730-6_730-2delTTTTA
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000312379
  ensembl transcript: ENST00000311117
  gene symbol: KMT2E
  hgvsc: ENST00000311117.3:c.730-6_730-2delTTTTA
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417888
  ensembl transcript: ENST00000476671
  gene symbol: KMT2E
  hgvsc: ENST00000476671.1:c.730-6_730-2delTTTTA
  variant of: http://identifiers.org/hgnc/18541
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2207
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1483
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1517
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1043
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35377
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1506
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9921
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4189
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 347
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6766
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1559
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
hgvs: c.730-6_730-2delTTTTA
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
population: African
population: Other
reference allele: GTTTAT
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: QD

7-104716479-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 104716479
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 104716479
    reference: chr 7
allele count: 1
allele frequency: 8.452942469273554e-6
allele num: 118302
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335599
  ensembl transcript: ENST00000334877
  gene symbol: KMT2E
  hgvsc: ENST00000334877.4:c.730-11G>C
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000257745
  ensembl transcript: ENST00000257745
  gene symbol: KMT2E
  hgvsc: ENST00000257745.4:c.730-11G>C
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000419883
  ensembl transcript: ENST00000478990
  gene symbol: KMT2E
  hgvsc: ENST00000478990.1:c.304-11G>C
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417888
  ensembl transcript: ENST00000476671
  gene symbol: KMT2E
  hgvsc: ENST00000476671.1:c.730-11G>C
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000312379
  ensembl transcript: ENST00000311117
  gene symbol: KMT2E
  hgvsc: ENST00000311117.3:c.730-11G>C
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335398
  ensembl transcript: ENST00000334884
  gene symbol: KMT2E
  hgvsc: ENST00000334884.5:c.730-11G>C
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417193
  ensembl transcript: ENST00000482560
  gene symbol: KMT2E
  hgvsc: ENST00000482560.2:c.*384-11G>C
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000333986
  ensembl transcript: ENST00000334914
  gene symbol: KMT2E
  hgvsc: ENST00000334914.7:c.-2106-11G>C
  variant of: http://identifiers.org/hgnc/18541
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 35377
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4189
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9921
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1483
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2207
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1506
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1043
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1517
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1367
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1864
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1463
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 927
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
population: Latino
population: South Asian
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum

7-104716479-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 104716479
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 104716479
    reference: chr 7
allele count: 1
allele frequency: 8.452942469273554e-6
allele num: 118302
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000257745
  ensembl transcript: ENST00000257745
  gene symbol: KMT2E
  hgvsc: ENST00000257745.4:c.730-11G>T
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417888
  ensembl transcript: ENST00000476671
  gene symbol: KMT2E
  hgvsc: ENST00000476671.1:c.730-11G>T
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335599
  ensembl transcript: ENST00000334877
  gene symbol: KMT2E
  hgvsc: ENST00000334877.4:c.730-11G>T
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000333986
  ensembl transcript: ENST00000334914
  gene symbol: KMT2E
  hgvsc: ENST00000334914.7:c.-2106-11G>T
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335398
  ensembl transcript: ENST00000334884
  gene symbol: KMT2E
  hgvsc: ENST00000334884.5:c.730-11G>T
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417193
  ensembl transcript: ENST00000482560
  gene symbol: KMT2E
  hgvsc: ENST00000482560.2:c.*384-11G>T
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000312379
  ensembl transcript: ENST00000311117
  gene symbol: KMT2E
  hgvsc: ENST00000311117.3:c.730-11G>T
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000419883
  ensembl transcript: ENST00000478990
  gene symbol: KMT2E
  hgvsc: ENST00000478990.1:c.304-11G>T
  variant of: http://identifiers.org/hgnc/18541
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1517
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1483
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9921
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1043
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1506
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2207
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4189
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35377
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1559
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1463
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39919
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4664
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1864
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP

http://identifiers.org/exac.variant/7-104716496-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 104716496
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 104716496
    reference: chr 7
allele count: 1
allele frequency: 8.36372152152822e-6
allele num: 119564
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000312379
  ensembl transcript: ENST00000311117
  gene symbol: KMT2E
  hgvsc: ENST00000311117.3:c.736C>A
  hgvsp: ENSP00000312379.3:p.Arg246Ser
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000419883
  ensembl transcript: ENST00000478990
  gene symbol: KMT2E
  hgvsc: ENST00000478990.1:c.310C>A
  hgvsp: ENSP00000419883.1:p.Arg104Ser
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000333986
  ensembl transcript: ENST00000334914
  gene symbol: KMT2E
  hgvsc: ENST00000334914.7:c.-2100C>A
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417888
  ensembl transcript: ENST00000476671
  gene symbol: KMT2E
  hgvsc: ENST00000476671.1:c.736C>A
  hgvsp: ENSP00000417888.1:p.Arg246Ser
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000257745
  ensembl transcript: ENST00000257745
  gene symbol: KMT2E
  hgvsc: ENST00000257745.4:c.736C>A
  hgvsp: ENSP00000257745.4:p.Arg246Ser
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417193
  ensembl transcript: ENST00000482560
  gene symbol: KMT2E
  hgvsc: ENST00000482560.2:c.*390C>A
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335398
  ensembl transcript: ENST00000334884
  gene symbol: KMT2E
  hgvsc: ENST00000334884.5:c.736C>A
  hgvsp: ENSP00000335398.5:p.Arg246Ser
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335599
  ensembl transcript: ENST00000334877
  gene symbol: KMT2E
  hgvsc: ENST00000334877.4:c.736C>A
  hgvsp: ENSP00000335599.4:p.Arg246Ser
  variant of: http://identifiers.org/hgnc/18541
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1044
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4241
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35836
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2208
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 411
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1517
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 871
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10460
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1509
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1477
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 96
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Arg246Ser
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: ReadPosRankSum

7-104716497-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 104716497
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 104716497
    reference: chr 7
allele count: 12
allele frequency: 1.002992260243058e-4
allele num: 119642
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000419883
  ensembl transcript: ENST00000478990
  gene symbol: KMT2E
  hgvsc: ENST00000478990.1:c.311G>A
  hgvsp: ENSP00000419883.1:p.Arg104His
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335599
  ensembl transcript: ENST00000334877
  gene symbol: KMT2E
  hgvsc: ENST00000334877.4:c.737G>A
  hgvsp: ENSP00000335599.4:p.Arg246His
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000333986
  ensembl transcript: ENST00000334914
  gene symbol: KMT2E
  hgvsc: ENST00000334914.7:c.-2099G>A
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000312379
  ensembl transcript: ENST00000311117
  gene symbol: KMT2E
  hgvsc: ENST00000311117.3:c.737G>A
  hgvsp: ENSP00000312379.3:p.Arg246His
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335398
  ensembl transcript: ENST00000334884
  gene symbol: KMT2E
  hgvsc: ENST00000334884.5:c.737G>A
  hgvsp: ENSP00000335398.5:p.Arg246His
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000257745
  ensembl transcript: ENST00000257745
  gene symbol: KMT2E
  hgvsc: ENST00000257745.4:c.737G>A
  hgvsp: ENSP00000257745.4:p.Arg246His
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417193
  ensembl transcript: ENST00000482560
  gene symbol: KMT2E
  hgvsc: ENST00000482560.2:c.*391G>A
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417888
  ensembl transcript: ENST00000476671
  gene symbol: KMT2E
  hgvsc: ENST00000476671.1:c.737G>A
  hgvsp: ENSP00000417888.1:p.Arg246His
  variant of: http://identifiers.org/hgnc/18541
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2206
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10500
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1518
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 837
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4253
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1045
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35845
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1507
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 659
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Arg246His
num of homozygotes: 0
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD

7-104716497-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 104716497
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 104716497
    reference: chr 7
allele count: 1
allele frequency: 8.358268835358821e-6
allele num: 119642
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000257745
  ensembl transcript: ENST00000257745
  gene symbol: KMT2E
  hgvsc: ENST00000257745.4:c.737G>T
  hgvsp: ENSP00000257745.4:p.Arg246Leu
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000312379
  ensembl transcript: ENST00000311117
  gene symbol: KMT2E
  hgvsc: ENST00000311117.3:c.737G>T
  hgvsp: ENSP00000312379.3:p.Arg246Leu
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417888
  ensembl transcript: ENST00000476671
  gene symbol: KMT2E
  hgvsc: ENST00000476671.1:c.737G>T
  hgvsp: ENSP00000417888.1:p.Arg246Leu
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335398
  ensembl transcript: ENST00000334884
  gene symbol: KMT2E
  hgvsc: ENST00000334884.5:c.737G>T
  hgvsp: ENSP00000335398.5:p.Arg246Leu
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000333986
  ensembl transcript: ENST00000334914
  gene symbol: KMT2E
  hgvsc: ENST00000334914.7:c.-2099G>T
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000419883
  ensembl transcript: ENST00000478990
  gene symbol: KMT2E
  hgvsc: ENST00000478990.1:c.311G>T
  hgvsp: ENSP00000419883.1:p.Arg104Leu
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335599
  ensembl transcript: ENST00000334877
  gene symbol: KMT2E
  hgvsc: ENST00000334877.4:c.737G>T
  hgvsp: ENSP00000335599.4:p.Arg246Leu
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417193
  ensembl transcript: ENST00000482560
  gene symbol: KMT2E
  hgvsc: ENST00000482560.2:c.*391G>T
  variant of: http://identifiers.org/hgnc/18541
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1507
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4253
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35845
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2206
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1518
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10500
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1045
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 837
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 975
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6776
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Arg246Leu
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: East Asian
population: African
reference allele: G
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD

7-104716503-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 104716503
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 104716503
    reference: chr 7
allele count: 1
allele frequency: 8.353939717970996e-6
allele num: 119704
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000419883
  ensembl transcript: ENST00000478990
  gene symbol: KMT2E
  hgvsc: ENST00000478990.1:c.317G>C
  hgvsp: ENSP00000419883.1:p.Gly106Ala
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417888
  ensembl transcript: ENST00000476671
  gene symbol: KMT2E
  hgvsc: ENST00000476671.1:c.743G>C
  hgvsp: ENSP00000417888.1:p.Gly248Ala
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335599
  ensembl transcript: ENST00000334877
  gene symbol: KMT2E
  hgvsc: ENST00000334877.4:c.743G>C
  hgvsp: ENSP00000335599.4:p.Gly248Ala
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000312379
  ensembl transcript: ENST00000311117
  gene symbol: KMT2E
  hgvsc: ENST00000311117.3:c.743G>C
  hgvsp: ENSP00000312379.3:p.Gly248Ala
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000257745
  ensembl transcript: ENST00000257745
  gene symbol: KMT2E
  hgvsc: ENST00000257745.4:c.743G>C
  hgvsp: ENSP00000257745.4:p.Gly248Ala
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000333986
  ensembl transcript: ENST00000334914
  gene symbol: KMT2E
  hgvsc: ENST00000334914.7:c.-2093G>C
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417193
  ensembl transcript: ENST00000482560
  gene symbol: KMT2E
  hgvsc: ENST00000482560.2:c.*397G>C
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335398
  ensembl transcript: ENST00000334884
  gene symbol: KMT2E
  hgvsc: ENST00000334884.5:c.743G>C
  hgvsp: ENSP00000335398.5:p.Gly248Ala
  variant of: http://identifiers.org/hgnc/18541
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1509
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10678
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35672
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1043
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2198
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 811
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4213
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1517
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6763
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 925
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Gly248Ala
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: Other
population: European (Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD

7-104716516-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 104716516
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 104716516
    reference: chr 7
allele count: 1
allele frequency: 8.373526259378349e-6
allele num: 119424
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000312379
  ensembl transcript: ENST00000311117
  gene symbol: KMT2E
  hgvsc: ENST00000311117.3:c.756A>G
  hgvsp: ENST00000311117.3:c.756A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000333986
  ensembl transcript: ENST00000334914
  gene symbol: KMT2E
  hgvsc: ENST00000334914.7:c.-2080A>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000419883
  ensembl transcript: ENST00000478990
  gene symbol: KMT2E
  hgvsc: ENST00000478990.1:c.330A>G
  hgvsp: ENST00000478990.1:c.330A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335599
  ensembl transcript: ENST00000334877
  gene symbol: KMT2E
  hgvsc: ENST00000334877.4:c.756A>G
  hgvsp: ENST00000334877.4:c.756A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000257745
  ensembl transcript: ENST00000257745
  gene symbol: KMT2E
  hgvsc: ENST00000257745.4:c.756A>G
  hgvsp: ENST00000257745.4:c.756A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335398
  ensembl transcript: ENST00000334884
  gene symbol: KMT2E
  hgvsc: ENST00000334884.5:c.756A>G
  hgvsp: ENST00000334884.5:c.756A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417888
  ensembl transcript: ENST00000476671
  gene symbol: KMT2E
  hgvsc: ENST00000476671.1:c.756A>G
  hgvsp: ENST00000476671.1:c.756A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417193
  ensembl transcript: ENST00000482560
  gene symbol: KMT2E
  hgvsc: ENST00000482560.2:c.*410A>G
  variant of: http://identifiers.org/hgnc/18541
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10966
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2197
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1505
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 893
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 948
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4218
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34713
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1517
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1044
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 236
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1452
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6764
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ser252Ser
num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
reference allele: A
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP

http://identifiers.org/exac.variant/7-104716520-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 104716520
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 104716520
    reference: chr 7
allele count: 2
allele frequency: 1.676164934629567e-5
allele num: 119320
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000312379
  ensembl transcript: ENST00000311117
  gene symbol: KMT2E
  hgvsc: ENST00000311117.3:c.760A>C
  hgvsp: ENST00000311117.3:c.760A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000333986
  ensembl transcript: ENST00000334914
  gene symbol: KMT2E
  hgvsc: ENST00000334914.7:c.-2076A>C
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417888
  ensembl transcript: ENST00000476671
  gene symbol: KMT2E
  hgvsc: ENST00000476671.1:c.760A>C
  hgvsp: ENST00000476671.1:c.760A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000419883
  ensembl transcript: ENST00000478990
  gene symbol: KMT2E
  hgvsc: ENST00000478990.1:c.334A>C
  hgvsp: ENST00000478990.1:c.334A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000257745
  ensembl transcript: ENST00000257745
  gene symbol: KMT2E
  hgvsc: ENST00000257745.4:c.760A>C
  hgvsp: ENST00000257745.4:c.760A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335398
  ensembl transcript: ENST00000334884
  gene symbol: KMT2E
  hgvsc: ENST00000334884.5:c.760A>C
  hgvsp: ENST00000334884.5:c.760A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335599
  ensembl transcript: ENST00000334877
  gene symbol: KMT2E
  hgvsc: ENST00000334877.4:c.760A>C
  hgvsp: ENST00000334877.4:c.760A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417193
  ensembl transcript: ENST00000482560
  gene symbol: KMT2E
  hgvsc: ENST00000482560.2:c.*414A>C
  variant of: http://identifiers.org/hgnc/18541
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1045
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2195
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10993
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4220
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1118
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1506
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34349
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1517
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 278
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1363
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1843
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Arg254Arg
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
reference allele: A
site quality: VQSLOD
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff

7-104716520-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 104716520
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 104716520
    reference: chr 7
allele count: 1
allele frequency: 8.380824673147837e-6
allele num: 119320
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335599
  ensembl transcript: ENST00000334877
  gene symbol: KMT2E
  hgvsc: ENST00000334877.4:c.760A>G
  hgvsp: ENSP00000335599.4:p.Arg254Gly
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335398
  ensembl transcript: ENST00000334884
  gene symbol: KMT2E
  hgvsc: ENST00000334884.5:c.760A>G
  hgvsp: ENSP00000335398.5:p.Arg254Gly
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417888
  ensembl transcript: ENST00000476671
  gene symbol: KMT2E
  hgvsc: ENST00000476671.1:c.760A>G
  hgvsp: ENSP00000417888.1:p.Arg254Gly
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000333986
  ensembl transcript: ENST00000334914
  gene symbol: KMT2E
  hgvsc: ENST00000334914.7:c.-2076A>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000419883
  ensembl transcript: ENST00000478990
  gene symbol: KMT2E
  hgvsc: ENST00000478990.1:c.334A>G
  hgvsp: ENSP00000419883.1:p.Arg112Gly
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417193
  ensembl transcript: ENST00000482560
  gene symbol: KMT2E
  hgvsc: ENST00000482560.2:c.*414A>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000257745
  ensembl transcript: ENST00000257745
  gene symbol: KMT2E
  hgvsc: ENST00000257745.4:c.760A>G
  hgvsp: ENSP00000257745.4:p.Arg254Gly
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000312379
  ensembl transcript: ENST00000311117
  gene symbol: KMT2E
  hgvsc: ENST00000311117.3:c.760A>G
  hgvsp: ENSP00000312379.3:p.Arg254Gly
  variant of: http://identifiers.org/hgnc/18541
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4220
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10993
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1506
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34349
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1517
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 299
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1118
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2195
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1045
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6766
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 278
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Arg254Gly
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: South Asian
reference allele: A
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: FS

7-104716522-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 104716522
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 104716522
    reference: chr 7
allele count: 1
allele frequency: 8.390387971539804e-6
allele num: 119184
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417888
  ensembl transcript: ENST00000476671
  gene symbol: KMT2E
  hgvsc: ENST00000476671.1:c.762A>G
  hgvsp: ENST00000476671.1:c.762A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335398
  ensembl transcript: ENST00000334884
  gene symbol: KMT2E
  hgvsc: ENST00000334884.5:c.762A>G
  hgvsp: ENST00000334884.5:c.762A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417193
  ensembl transcript: ENST00000482560
  gene symbol: KMT2E
  hgvsc: ENST00000482560.2:c.*416A>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000257745
  ensembl transcript: ENST00000257745
  gene symbol: KMT2E
  hgvsc: ENST00000257745.4:c.762A>G
  hgvsp: ENST00000257745.4:c.762A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335599
  ensembl transcript: ENST00000334877
  gene symbol: KMT2E
  hgvsc: ENST00000334877.4:c.762A>G
  hgvsp: ENST00000334877.4:c.762A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000312379
  ensembl transcript: ENST00000311117
  gene symbol: KMT2E
  hgvsc: ENST00000311117.3:c.762A>G
  hgvsp: ENST00000311117.3:c.762A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000419883
  ensembl transcript: ENST00000478990
  gene symbol: KMT2E
  hgvsc: ENST00000478990.1:c.336A>G
  hgvsp: ENST00000478990.1:c.336A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000333986
  ensembl transcript: ENST00000334914
  gene symbol: KMT2E
  hgvsc: ENST00000334914.7:c.-2074A>G
  variant of: http://identifiers.org/hgnc/18541
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1517
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10979
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1506
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1069
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2194
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1406
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4212
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1043
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 33930
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 359
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1714
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 659
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1363
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Arg254Arg
num of homozygotes: 0
population: African
population: East Asian
population: European (Finnish)
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: FS

7-104716538-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 104716538
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 104716538
    reference: chr 7
allele count: 2
allele frequency: 1.691446355778827e-5
allele num: 118242
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000419883
  ensembl transcript: ENST00000478990
  gene symbol: KMT2E
  hgvsc: ENST00000478990.1:c.342+10T>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335599
  ensembl transcript: ENST00000334877
  gene symbol: KMT2E
  hgvsc: ENST00000334877.4:c.768+10T>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000257745
  ensembl transcript: ENST00000257745
  gene symbol: KMT2E
  hgvsc: ENST00000257745.4:c.768+10T>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335398
  ensembl transcript: ENST00000334884
  gene symbol: KMT2E
  hgvsc: ENST00000334884.5:c.768+10T>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417888
  ensembl transcript: ENST00000476671
  gene symbol: KMT2E
  hgvsc: ENST00000476671.1:c.768+10T>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417193
  ensembl transcript: ENST00000482560
  gene symbol: KMT2E
  hgvsc: ENST00000482560.2:c.*422+10T>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000333986
  ensembl transcript: ENST00000334914
  gene symbol: KMT2E
  hgvsc: ENST00000334914.7:c.-2068+10T>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000312379
  ensembl transcript: ENST00000311117
  gene symbol: KMT2E
  hgvsc: ENST00000311117.3:c.768+10T>G
  variant of: http://identifiers.org/hgnc/18541
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1116
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4202
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1042
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3603
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1508
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1517
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10774
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2195
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 30755
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1507
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1291
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 685
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3124
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1356
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum

7-104716541-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 104716541
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 104716541
    reference: chr 7
allele count: 1
allele frequency: 8.47443263673497e-6
allele num: 118002
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000333986
  ensembl transcript: ENST00000334914
  gene symbol: KMT2E
  hgvsc: ENST00000334914.7:c.-2068+13A>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417193
  ensembl transcript: ENST00000482560
  gene symbol: KMT2E
  hgvsc: ENST00000482560.2:c.*422+13A>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417888
  ensembl transcript: ENST00000476671
  gene symbol: KMT2E
  hgvsc: ENST00000476671.1:c.768+13A>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000312379
  ensembl transcript: ENST00000311117
  gene symbol: KMT2E
  hgvsc: ENST00000311117.3:c.768+13A>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000257745
  ensembl transcript: ENST00000257745
  gene symbol: KMT2E
  hgvsc: ENST00000257745.4:c.768+13A>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000419883
  ensembl transcript: ENST00000478990
  gene symbol: KMT2E
  hgvsc: ENST00000478990.1:c.342+13A>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335599
  ensembl transcript: ENST00000334877
  gene symbol: KMT2E
  hgvsc: ENST00000334877.4:c.768+13A>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335398
  ensembl transcript: ENST00000334884
  gene symbol: KMT2E
  hgvsc: ENST00000334884.5:c.768+13A>G
  variant of: http://identifiers.org/hgnc/18541
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1478
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4436
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1613
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2195
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29661
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4186
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1517
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1505
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10577
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1042
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3563
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1064
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6765
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 34902
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: A
site quality: MQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD

http://identifiers.org/exac.variant/7-104716546-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 104716546
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 104716546
    reference: chr 7
allele count: 1
allele frequency: 8.496609852668785e-6
allele num: 117694
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000333986
  ensembl transcript: ENST00000334914
  gene symbol: KMT2E
  hgvsc: ENST00000334914.7:c.-2068+18A>C
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417888
  ensembl transcript: ENST00000476671
  gene symbol: KMT2E
  hgvsc: ENST00000476671.1:c.768+18A>C
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417193
  ensembl transcript: ENST00000482560
  gene symbol: KMT2E
  hgvsc: ENST00000482560.2:c.*422+18A>C
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000312379
  ensembl transcript: ENST00000311117
  gene symbol: KMT2E
  hgvsc: ENST00000311117.3:c.768+18A>C
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335398
  ensembl transcript: ENST00000334884
  gene symbol: KMT2E
  hgvsc: ENST00000334884.5:c.768+18A>C
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335599
  ensembl transcript: ENST00000334877
  gene symbol: KMT2E
  hgvsc: ENST00000334877.4:c.768+18A>C
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000257745
  ensembl transcript: ENST00000257745
  gene symbol: KMT2E
  hgvsc: ENST00000257745.4:c.768+18A>C
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000419883
  ensembl transcript: ENST00000478990
  gene symbol: KMT2E
  hgvsc: ENST00000478990.1:c.342+18A>C
  variant of: http://identifiers.org/hgnc/18541
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5765
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4174
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27638
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10423
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 71
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1517
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1042
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1506
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2197
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1747
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2194
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 308
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 923
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32768
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4185
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 327
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4413
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ

7-104716548-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 104716548
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 104716548
    reference: chr 7
allele count: 1
allele frequency: 8.510493438409559e-6
allele num: 117502
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417193
  ensembl transcript: ENST00000482560
  gene symbol: KMT2E
  hgvsc: ENST00000482560.2:c.*422+20G>C
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335599
  ensembl transcript: ENST00000334877
  gene symbol: KMT2E
  hgvsc: ENST00000334877.4:c.768+20G>C
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000419883
  ensembl transcript: ENST00000478990
  gene symbol: KMT2E
  hgvsc: ENST00000478990.1:c.342+20G>C
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000312379
  ensembl transcript: ENST00000311117
  gene symbol: KMT2E
  hgvsc: ENST00000311117.3:c.768+20G>C
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335398
  ensembl transcript: ENST00000334884
  gene symbol: KMT2E
  hgvsc: ENST00000334884.5:c.768+20G>C
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000257745
  ensembl transcript: ENST00000257745
  gene symbol: KMT2E
  hgvsc: ENST00000257745.4:c.768+20G>C
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000333986
  ensembl transcript: ENST00000334914
  gene symbol: KMT2E
  hgvsc: ENST00000334914.7:c.-2068+20G>C
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417888
  ensembl transcript: ENST00000476671
  gene symbol: KMT2E
  hgvsc: ENST00000476671.1:c.768+20G>C
  variant of: http://identifiers.org/hgnc/18541
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2637
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10317
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2204
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1509
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4200
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6447
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1804
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1044
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26514
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1517
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1618
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1555
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6765
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4432
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 360
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 657
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 399
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: G
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff

7-104716549-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 104716549
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 104716549
    reference: chr 7
allele count: 1
allele frequency: 8.517597356137781e-6
allele num: 117404
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335398
  ensembl transcript: ENST00000334884
  gene symbol: KMT2E
  hgvsc: ENST00000334884.5:c.768+21G>T
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000312379
  ensembl transcript: ENST00000311117
  gene symbol: KMT2E
  hgvsc: ENST00000311117.3:c.768+21G>T
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000333986
  ensembl transcript: ENST00000334914
  gene symbol: KMT2E
  hgvsc: ENST00000334914.7:c.-2068+21G>T
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000419883
  ensembl transcript: ENST00000478990
  gene symbol: KMT2E
  hgvsc: ENST00000478990.1:c.342+21G>T
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000257745
  ensembl transcript: ENST00000257745
  gene symbol: KMT2E
  hgvsc: ENST00000257745.4:c.768+21G>T
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417193
  ensembl transcript: ENST00000482560
  gene symbol: KMT2E
  hgvsc: ENST00000482560.2:c.*422+21G>T
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417888
  ensembl transcript: ENST00000476671
  gene symbol: KMT2E
  hgvsc: ENST00000476671.1:c.768+21G>T
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335599
  ensembl transcript: ENST00000334877
  gene symbol: KMT2E
  hgvsc: ENST00000334877.4:c.768+21G>T
  variant of: http://identifiers.org/hgnc/18541
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10244
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25888
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1815
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1042
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2201
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2965
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6831
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1509
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1517
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4180
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6767
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1385
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1716
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4332
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 409
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1786
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
reference allele: G
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: QD

7-104716549-GTGT-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 104716549
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 104716546
    reference: chr 7
allele count: 2
allele frequency: 1.703519471227556e-5
allele num: 117404
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000312379
  ensembl transcript: ENST00000311117
  gene symbol: KMT2E
  hgvsc: ENST00000311117.3:c.768+26_768+28delGTT
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000419883
  ensembl transcript: ENST00000478990
  gene symbol: KMT2E
  hgvsc: ENST00000478990.1:c.342+26_342+28delGTT
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417888
  ensembl transcript: ENST00000476671
  gene symbol: KMT2E
  hgvsc: ENST00000476671.1:c.768+26_768+28delGTT
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417193
  ensembl transcript: ENST00000482560
  gene symbol: KMT2E
  hgvsc: ENST00000482560.2:c.*422+26_*422+28delGTT
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000333986
  ensembl transcript: ENST00000334914
  gene symbol: KMT2E
  hgvsc: ENST00000334914.7:c.-2068+26_-2068+28delGTT
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335599
  ensembl transcript: ENST00000334877
  gene symbol: KMT2E
  hgvsc: ENST00000334877.4:c.768+26_768+28delGTT
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335398
  ensembl transcript: ENST00000334884
  gene symbol: KMT2E
  hgvsc: ENST00000334884.5:c.768+26_768+28delGTT
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000257745
  ensembl transcript: ENST00000257745
  gene symbol: KMT2E
  hgvsc: ENST00000257745.4:c.768+26_768+28delGTT
  variant of: http://identifiers.org/hgnc/18541
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2201
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6831
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1509
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1042
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1815
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25888
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10244
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1517
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2965
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4180
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 922
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 409
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2848
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1716
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 658
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1385
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
reference allele: GTGT
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum

7-104716552-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 104716552
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 104716552
    reference: chr 7
allele count: 2
allele frequency: 1.704012950498424e-5
allele num: 117370
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335599
  ensembl transcript: ENST00000334877
  gene symbol: KMT2E
  hgvsc: ENST00000334877.4:c.768+24T>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417193
  ensembl transcript: ENST00000482560
  gene symbol: KMT2E
  hgvsc: ENST00000482560.2:c.*422+24T>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335398
  ensembl transcript: ENST00000334884
  gene symbol: KMT2E
  hgvsc: ENST00000334884.5:c.768+24T>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000312379
  ensembl transcript: ENST00000311117
  gene symbol: KMT2E
  hgvsc: ENST00000311117.3:c.768+24T>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000257745
  ensembl transcript: ENST00000257745
  gene symbol: KMT2E
  hgvsc: ENST00000257745.4:c.768+24T>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000333986
  ensembl transcript: ENST00000334914
  gene symbol: KMT2E
  hgvsc: ENST00000334914.7:c.-2068+24T>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000419883
  ensembl transcript: ENST00000478990
  gene symbol: KMT2E
  hgvsc: ENST00000478990.1:c.342+24T>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417888
  ensembl transcript: ENST00000476671
  gene symbol: KMT2E
  hgvsc: ENST00000476671.1:c.768+24T>G
  variant of: http://identifiers.org/hgnc/18541
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1043
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4158
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1506
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1517
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7834
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9905
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1862
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24102
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4055
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2193
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 657
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 575
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1343
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1798
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 639
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4928
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
reference allele: T
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQ

7-104716562-CTG-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 104716562
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 104716560
    reference: chr 7
allele count: 1
allele frequency: 8.573829243616784e-6
allele num: 116634
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335599
  ensembl transcript: ENST00000334877
  gene symbol: KMT2E
  hgvsc: ENST00000334877.4:c.768+36_768+37delGT
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000333986
  ensembl transcript: ENST00000334914
  gene symbol: KMT2E
  hgvsc: ENST00000334914.7:c.-2068+36_-2068+37delGT
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335398
  ensembl transcript: ENST00000334884
  gene symbol: KMT2E
  hgvsc: ENST00000334884.5:c.768+36_768+37delGT
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417888
  ensembl transcript: ENST00000476671
  gene symbol: KMT2E
  hgvsc: ENST00000476671.1:c.768+36_768+37delGT
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000257745
  ensembl transcript: ENST00000257745
  gene symbol: KMT2E
  hgvsc: ENST00000257745.4:c.768+36_768+37delGT
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000312379
  ensembl transcript: ENST00000311117
  gene symbol: KMT2E
  hgvsc: ENST00000311117.3:c.768+36_768+37delGT
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417193
  ensembl transcript: ENST00000482560
  gene symbol: KMT2E
  hgvsc: ENST00000482560.2:c.*422+36_*422+37delGT
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000419883
  ensembl transcript: ENST00000478990
  gene symbol: KMT2E
  hgvsc: ENST00000478990.1:c.342+36_342+37delGT
  variant of: http://identifiers.org/hgnc/18541
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9430
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2049
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17675
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9878
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 644
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1495
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3969
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1517
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2172
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8909
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1036
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1594
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 653
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5284
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5627
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3682
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 207
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21188
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
reference allele: CTG
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD

7-104716564-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 104716564
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 104716564
    reference: chr 7
allele count: 1
allele frequency: 8.593427746459508e-6
allele num: 116368
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000419883
  ensembl transcript: ENST00000478990
  gene symbol: KMT2E
  hgvsc: ENST00000478990.1:c.342+36G>T
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335398
  ensembl transcript: ENST00000334884
  gene symbol: KMT2E
  hgvsc: ENST00000334884.5:c.768+36G>T
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000333986
  ensembl transcript: ENST00000334914
  gene symbol: KMT2E
  hgvsc: ENST00000334914.7:c.-2068+36G>T
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417193
  ensembl transcript: ENST00000482560
  gene symbol: KMT2E
  hgvsc: ENST00000482560.2:c.*422+36G>T
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000257745
  ensembl transcript: ENST00000257745
  gene symbol: KMT2E
  hgvsc: ENST00000257745.4:c.768+36G>T
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000312379
  ensembl transcript: ENST00000311117
  gene symbol: KMT2E
  hgvsc: ENST00000311117.3:c.768+36G>T
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335599
  ensembl transcript: ENST00000334877
  gene symbol: KMT2E
  hgvsc: ENST00000334877.4:c.768+36G>T
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417888
  ensembl transcript: ENST00000476671
  gene symbol: KMT2E
  hgvsc: ENST00000476671.1:c.768+36G>T
  variant of: http://identifiers.org/hgnc/18541
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9972
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2171
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2126
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3902
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 644
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10985
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8512
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1489
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16410
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1517
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1036
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 913
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 792
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5001
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 268
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1993
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3547
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 651
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum

7-104716567-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 104716567
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 104716567
    reference: chr 7
allele count: 1
allele frequency: 8.594166279929183e-6
allele num: 116358
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335398
  ensembl transcript: ENST00000334884
  gene symbol: KMT2E
  hgvsc: ENST00000334884.5:c.768+39A>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000257745
  ensembl transcript: ENST00000257745
  gene symbol: KMT2E
  hgvsc: ENST00000257745.4:c.768+39A>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417888
  ensembl transcript: ENST00000476671
  gene symbol: KMT2E
  hgvsc: ENST00000476671.1:c.768+39A>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000312379
  ensembl transcript: ENST00000311117
  gene symbol: KMT2E
  hgvsc: ENST00000311117.3:c.768+39A>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417193
  ensembl transcript: ENST00000482560
  gene symbol: KMT2E
  hgvsc: ENST00000482560.2:c.*422+39A>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000333986
  ensembl transcript: ENST00000334914
  gene symbol: KMT2E
  hgvsc: ENST00000334914.7:c.-2068+39A>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000419883
  ensembl transcript: ENST00000478990
  gene symbol: KMT2E
  hgvsc: ENST00000478990.1:c.342+39A>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335599
  ensembl transcript: ENST00000334877
  gene symbol: KMT2E
  hgvsc: ENST00000334877.4:c.768+39A>G
  variant of: http://identifiers.org/hgnc/18541
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1517
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2163
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 436
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10034
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3767
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15176
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12746
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7941
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2246
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 644
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1486
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1036
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 914
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 300
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1290
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 959
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1722
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3028
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: South Asian
population: African
reference allele: A
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD

7-104716568-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 104716568
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 104716568
    reference: chr 7
allele count: 3
allele frequency: 2.582511233923867e-5
allele num: 116166
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000333986
  ensembl transcript: ENST00000334914
  gene symbol: KMT2E
  hgvsc: ENST00000334914.7:c.-2068+40T>C
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000257745
  ensembl transcript: ENST00000257745
  gene symbol: KMT2E
  hgvsc: ENST00000257745.4:c.768+40T>C
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335599
  ensembl transcript: ENST00000334877
  gene symbol: KMT2E
  hgvsc: ENST00000334877.4:c.768+40T>C
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000419883
  ensembl transcript: ENST00000478990
  gene symbol: KMT2E
  hgvsc: ENST00000478990.1:c.342+40T>C
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417888
  ensembl transcript: ENST00000476671
  gene symbol: KMT2E
  hgvsc: ENST00000476671.1:c.768+40T>C
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335398
  ensembl transcript: ENST00000334884
  gene symbol: KMT2E
  hgvsc: ENST00000334884.5:c.768+40T>C
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000312379
  ensembl transcript: ENST00000311117
  gene symbol: KMT2E
  hgvsc: ENST00000311117.3:c.768+40T>C
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417193
  ensembl transcript: ENST00000482560
  gene symbol: KMT2E
  hgvsc: ENST00000482560.2:c.*422+40T>C
  variant of: http://identifiers.org/hgnc/18541
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1484
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13268
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2161
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1037
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14848
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10025
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3738
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7746
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2286
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 254
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1517
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 644
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1021
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5694
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1322
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6754
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 5921
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5720
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3439
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: African
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

7-104717364-TGTAAGTCC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 104717364
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 104717356
    reference: chr 7
allele count: 0
allele frequency: 0.0e0
allele num: 68240
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000312379
  ensembl transcript: ENST00000311117
  gene symbol: KMT2E
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335599
  ensembl transcript: ENST00000334877
  gene symbol: KMT2E
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335398
  ensembl transcript: ENST00000334884
  gene symbol: KMT2E
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000333986
  ensembl transcript: ENST00000334914
  gene symbol: KMT2E
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000419883
  ensembl transcript: ENST00000478990
  gene symbol: KMT2E
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417888
  ensembl transcript: ENST00000476671
  gene symbol: KMT2E
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000257745
  ensembl transcript: ENST00000257745
  gene symbol: KMT2E
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417193
  ensembl transcript: ENST00000482560
  gene symbol: KMT2E
  variant of: http://identifiers.org/hgnc/18541
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10390
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3457
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1029
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17049
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2059
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19501
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3996
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5265
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3807
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3565
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 198
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 395
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3367
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 826
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1688
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4926
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: TGTAAGTCC
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ

7-104717365-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 104717365
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 104717365
    reference: chr 7
allele count: 3
allele frequency: 4.236929073807304e-5
allele num: 70806
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000419883
  ensembl transcript: ENST00000478990
  gene symbol: KMT2E
  hgvsc: ENST00000478990.1:c.343-45G>C
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000312379
  ensembl transcript: ENST00000311117
  gene symbol: KMT2E
  hgvsc: ENST00000311117.3:c.769-45G>C
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335599
  ensembl transcript: ENST00000334877
  gene symbol: KMT2E
  hgvsc: ENST00000334877.4:c.769-45G>C
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417193
  ensembl transcript: ENST00000482560
  gene symbol: KMT2E
  hgvsc: ENST00000482560.2:c.*423-45G>C
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417888
  ensembl transcript: ENST00000476671
  gene symbol: KMT2E
  hgvsc: ENST00000476671.1:c.769-45G>C
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000333986
  ensembl transcript: ENST00000334914
  gene symbol: KMT2E
  hgvsc: ENST00000334914.7:c.-2067-45G>C
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000257745
  ensembl transcript: ENST00000257745
  gene symbol: KMT2E
  hgvsc: ENST00000257745.4:c.769-45G>C
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335398
  ensembl transcript: ENST00000334884
  gene symbol: KMT2E
  hgvsc: ENST00000334884.5:c.769-45G>C
  variant of: http://identifiers.org/hgnc/18541
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 600
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17146
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 101
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10217
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19380
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 349
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4195
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2057
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 444
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3454
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1034
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 337
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 933
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17666
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3005
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4889
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 411
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
reference allele: G
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum

7-104717366-TAA-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 104717366
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 104717364
    reference: chr 7
allele count: 1
allele frequency: 1.363735544403229e-5
allele num: 73328
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000257745
  ensembl transcript: ENST00000257745
  gene symbol: KMT2E
  hgvsc: ENST00000257745.4:c.769-43_769-42delAA
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000312379
  ensembl transcript: ENST00000311117
  gene symbol: KMT2E
  hgvsc: ENST00000311117.3:c.769-43_769-42delAA
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335599
  ensembl transcript: ENST00000334877
  gene symbol: KMT2E
  hgvsc: ENST00000334877.4:c.769-43_769-42delAA
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000333986
  ensembl transcript: ENST00000334914
  gene symbol: KMT2E
  hgvsc: ENST00000334914.7:c.-2067-43_-2067-42delAA
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335398
  ensembl transcript: ENST00000334884
  gene symbol: KMT2E
  hgvsc: ENST00000334884.5:c.769-43_769-42delAA
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417888
  ensembl transcript: ENST00000476671
  gene symbol: KMT2E
  hgvsc: ENST00000476671.1:c.769-43_769-42delAA
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417193
  ensembl transcript: ENST00000482560
  gene symbol: KMT2E
  hgvsc: ENST00000482560.2:c.*423-43_*423-42delAA
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000419883
  ensembl transcript: ENST00000478990
  gene symbol: KMT2E
  hgvsc: ENST00000478990.1:c.343-43_343-42delAA
  variant of: http://identifiers.org/hgnc/18541
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19443
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 352
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2119
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9894
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4535
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1028
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3377
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17115
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 166
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 359
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 433
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4491
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2623
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2777
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6102
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1460
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
population: African
reference allele: TAA
site quality: QD
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ

7-104717367-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 104717367
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 104717367
    reference: chr 7
allele count: 10
allele frequency: 1.439553162698299e-4
allele num: 69466
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335599
  ensembl transcript: ENST00000334877
  gene symbol: KMT2E
  hgvsc: ENST00000334877.4:c.769-43A>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000419883
  ensembl transcript: ENST00000478990
  gene symbol: KMT2E
  hgvsc: ENST00000478990.1:c.343-43A>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335398
  ensembl transcript: ENST00000334884
  gene symbol: KMT2E
  hgvsc: ENST00000334884.5:c.769-43A>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000312379
  ensembl transcript: ENST00000311117
  gene symbol: KMT2E
  hgvsc: ENST00000311117.3:c.769-43A>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000257745
  ensembl transcript: ENST00000257745
  gene symbol: KMT2E
  hgvsc: ENST00000257745.4:c.769-43A>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417193
  ensembl transcript: ENST00000482560
  gene symbol: KMT2E
  hgvsc: ENST00000482560.2:c.*423-43A>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417888
  ensembl transcript: ENST00000476671
  gene symbol: KMT2E
  hgvsc: ENST00000476671.1:c.769-43A>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000333986
  ensembl transcript: ENST00000334914
  gene symbol: KMT2E
  hgvsc: ENST00000334914.7:c.-2067-43A>G
  variant of: http://identifiers.org/hgnc/18541
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 2171
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9508
  bin: 1.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 3167
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 147
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1065
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 603
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 351
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 19319
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17008
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5276
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 354
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 453
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1403
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4224
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4842
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6395
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3976
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18576
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2321
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: Other
population: Latino
reference allele: A
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum

7-104717368-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 104717368
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 104717368
    reference: chr 7
allele count: 10
allele frequency: 1.368213660245184e-4
allele num: 73088
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000312379
  ensembl transcript: ENST00000311117
  gene symbol: KMT2E
  hgvsc: ENST00000311117.3:c.769-42A>T
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417193
  ensembl transcript: ENST00000482560
  gene symbol: KMT2E
  hgvsc: ENST00000482560.2:c.*423-42A>T
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000257745
  ensembl transcript: ENST00000257745
  gene symbol: KMT2E
  hgvsc: ENST00000257745.4:c.769-42A>T
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335398
  ensembl transcript: ENST00000334884
  gene symbol: KMT2E
  hgvsc: ENST00000334884.5:c.769-42A>T
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335599
  ensembl transcript: ENST00000334877
  gene symbol: KMT2E
  hgvsc: ENST00000334877.4:c.769-42A>T
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000333986
  ensembl transcript: ENST00000334914
  gene symbol: KMT2E
  hgvsc: ENST00000334914.7:c.-2067-42A>T
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000419883
  ensembl transcript: ENST00000478990
  gene symbol: KMT2E
  hgvsc: ENST00000478990.1:c.343-42A>T
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417888
  ensembl transcript: ENST00000476671
  gene symbol: KMT2E
  hgvsc: ENST00000476671.1:c.769-42A>T
  variant of: http://identifiers.org/hgnc/18541
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6133
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 598
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8867
  bin: 1.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 460
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2264
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19224
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16955
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 229
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3003
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 255
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 104
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1089
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6588
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3944
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1248
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4075
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3173
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1435
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 375
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 222
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: South Asian
population: Latino
population: Other
reference allele: A
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum

7-104717371-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 104717371
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 104717371
    reference: chr 7
allele count: 2
allele frequency: 2.566274026740575e-5
allele num: 77934
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335398
  ensembl transcript: ENST00000334884
  gene symbol: KMT2E
  hgvsc: ENST00000334884.5:c.769-39C>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335599
  ensembl transcript: ENST00000334877
  gene symbol: KMT2E
  hgvsc: ENST00000334877.4:c.769-39C>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417888
  ensembl transcript: ENST00000476671
  gene symbol: KMT2E
  hgvsc: ENST00000476671.1:c.769-39C>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000333986
  ensembl transcript: ENST00000334914
  gene symbol: KMT2E
  hgvsc: ENST00000334914.7:c.-2067-39C>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417193
  ensembl transcript: ENST00000482560
  gene symbol: KMT2E
  hgvsc: ENST00000482560.2:c.*423-39C>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000257745
  ensembl transcript: ENST00000257745
  gene symbol: KMT2E
  hgvsc: ENST00000257745.4:c.769-39C>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000312379
  ensembl transcript: ENST00000311117
  gene symbol: KMT2E
  hgvsc: ENST00000311117.3:c.769-39C>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000419883
  ensembl transcript: ENST00000478990
  gene symbol: KMT2E
  hgvsc: ENST00000478990.1:c.343-39C>G
  variant of: http://identifiers.org/hgnc/18541
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2636
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18546
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 16630
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1173
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2392
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6777
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9389
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 355
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 463
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 423
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2969
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1753
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 9113
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 613
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1667
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1280
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1229
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP

7-104717372-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 104717372
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 104717372
    reference: chr 7
allele count: 6
allele frequency: 7.520681875156681e-5
allele num: 79780
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417888
  ensembl transcript: ENST00000476671
  gene symbol: KMT2E
  hgvsc: ENST00000476671.1:c.769-38C>T
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335398
  ensembl transcript: ENST00000334884
  gene symbol: KMT2E
  hgvsc: ENST00000334884.5:c.769-38C>T
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000333986
  ensembl transcript: ENST00000334914
  gene symbol: KMT2E
  hgvsc: ENST00000334914.7:c.-2067-38C>T
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335599
  ensembl transcript: ENST00000334877
  gene symbol: KMT2E
  hgvsc: ENST00000334877.4:c.769-38C>T
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000419883
  ensembl transcript: ENST00000478990
  gene symbol: KMT2E
  hgvsc: ENST00000478990.1:c.343-38C>T
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417193
  ensembl transcript: ENST00000482560
  gene symbol: KMT2E
  hgvsc: ENST00000482560.2:c.*423-38C>T
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000257745
  ensembl transcript: ENST00000257745
  gene symbol: KMT2E
  hgvsc: ENST00000257745.4:c.769-38C>T
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000312379
  ensembl transcript: ENST00000311117
  gene symbol: KMT2E
  hgvsc: ENST00000311117.3:c.769-38C>T
  variant of: http://identifiers.org/hgnc/18541
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17731
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11314
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 16426
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 628
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2092
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5854
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1231
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 468
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2893
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19967
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10800
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1103
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5477
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 464
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1097
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3449
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
population: South Asian
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: MQ

7-104717373-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 104717373
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 104717373
    reference: chr 7
allele count: 64
allele frequency: 7.777939818190656e-4
allele num: 82284
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335599
  ensembl transcript: ENST00000334877
  gene symbol: KMT2E
  hgvsc: ENST00000334877.4:c.769-37G>A
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000312379
  ensembl transcript: ENST00000311117
  gene symbol: KMT2E
  hgvsc: ENST00000311117.3:c.769-37G>A
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335398
  ensembl transcript: ENST00000334884
  gene symbol: KMT2E
  hgvsc: ENST00000334884.5:c.769-37G>A
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000419883
  ensembl transcript: ENST00000478990
  gene symbol: KMT2E
  hgvsc: ENST00000478990.1:c.343-37G>A
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000257745
  ensembl transcript: ENST00000257745
  gene symbol: KMT2E
  hgvsc: ENST00000257745.4:c.769-37G>A
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000333986
  ensembl transcript: ENST00000334914
  gene symbol: KMT2E
  hgvsc: ENST00000334914.7:c.-2067-37G>A
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417888
  ensembl transcript: ENST00000476671
  gene symbol: KMT2E
  hgvsc: ENST00000476671.1:c.769-37G>A
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417193
  ensembl transcript: ENST00000482560
  gene symbol: KMT2E
  hgvsc: ENST00000482560.2:c.*423-37G>A
  variant of: http://identifiers.org/hgnc/18541
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15976
  bin: 1.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 4769
  bin: 1.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 14293
  bin: 2.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 3251
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 348
  bin: 5.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1762
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 16092
  bin: 7.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 209
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1365
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 78
  bin: 8.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2926
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 631
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2150
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 277
  bin: 9.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 762
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 902
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2577
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: South Asian
reference allele: G
site quality: VQSLOD
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff

7-104717374-T-TA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 104717374
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 104717375
    reference: chr 7
allele count: 6
allele frequency: 7.097903752425118e-5
allele num: 84532
alternate allele: TA
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417193
  ensembl transcript: ENST00000482560
  gene symbol: KMT2E
  hgvsc: ENST00000482560.2:c.*423-34dupA
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000419883
  ensembl transcript: ENST00000478990
  gene symbol: KMT2E
  hgvsc: ENST00000478990.1:c.343-34dupA
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000312379
  ensembl transcript: ENST00000311117
  gene symbol: KMT2E
  hgvsc: ENST00000311117.3:c.769-34dupA
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000257745
  ensembl transcript: ENST00000257745
  gene symbol: KMT2E
  hgvsc: ENST00000257745.4:c.769-34dupA
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335599
  ensembl transcript: ENST00000334877
  gene symbol: KMT2E
  hgvsc: ENST00000334877.4:c.769-34dupA
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335398
  ensembl transcript: ENST00000334884
  gene symbol: KMT2E
  hgvsc: ENST00000334884.5:c.769-34dupA
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417888
  ensembl transcript: ENST00000476671
  gene symbol: KMT2E
  hgvsc: ENST00000476671.1:c.769-34dupA
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000333986
  ensembl transcript: ENST00000334914
  gene symbol: KMT2E
  hgvsc: ENST00000334914.7:c.-2067-34dupA
  variant of: http://identifiers.org/hgnc/18541
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15852
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1545
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16249
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 481
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4083
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14919
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3444
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1410
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 489
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 293
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1761
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 582
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15188
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1821
  bin: 9.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 945
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18943
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: T
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD

7-104717382-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 104717382
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 104717382
    reference: chr 7
allele count: 1
allele frequency: 1.046813499706892e-5
allele num: 95528
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335599
  ensembl transcript: ENST00000334877
  gene symbol: KMT2E
  hgvsc: ENST00000334877.4:c.769-28G>A
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000257745
  ensembl transcript: ENST00000257745
  gene symbol: KMT2E
  hgvsc: ENST00000257745.4:c.769-28G>A
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000312379
  ensembl transcript: ENST00000311117
  gene symbol: KMT2E
  hgvsc: ENST00000311117.3:c.769-28G>A
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335398
  ensembl transcript: ENST00000334884
  gene symbol: KMT2E
  hgvsc: ENST00000334884.5:c.769-28G>A
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417888
  ensembl transcript: ENST00000476671
  gene symbol: KMT2E
  hgvsc: ENST00000476671.1:c.769-28G>A
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417193
  ensembl transcript: ENST00000482560
  gene symbol: KMT2E
  hgvsc: ENST00000482560.2:c.*423-28G>A
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000333986
  ensembl transcript: ENST00000334914
  gene symbol: KMT2E
  hgvsc: ENST00000334914.7:c.-2067-28G>A
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000419883
  ensembl transcript: ENST00000478990
  gene symbol: KMT2E
  hgvsc: ENST00000478990.1:c.343-28G>A
  variant of: http://identifiers.org/hgnc/18541
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1974
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11873
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5781
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 233
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1888
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 613
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 733
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28155
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7133
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 197
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1280
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2603
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1341
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13309
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 810
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 269
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: DP

7-104717384-T-TA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 104717384
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 104717385
    reference: chr 7
allele count: 504
allele frequency: 5.11841410407442e-3
allele num: 98468
alternate allele: TA
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335398
  ensembl transcript: ENST00000334884
  gene symbol: KMT2E
  hgvsc: ENST00000334884.5:c.769-25dupA
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417193
  ensembl transcript: ENST00000482560
  gene symbol: KMT2E
  hgvsc: ENST00000482560.2:c.*423-25dupA
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335599
  ensembl transcript: ENST00000334877
  gene symbol: KMT2E
  hgvsc: ENST00000334877.4:c.769-25dupA
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000333986
  ensembl transcript: ENST00000334914
  gene symbol: KMT2E
  hgvsc: ENST00000334914.7:c.-2067-25dupA
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417888
  ensembl transcript: ENST00000476671
  gene symbol: KMT2E
  hgvsc: ENST00000476671.1:c.769-25dupA
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000257745
  ensembl transcript: ENST00000257745
  gene symbol: KMT2E
  hgvsc: ENST00000257745.4:c.769-25dupA
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000419883
  ensembl transcript: ENST00000478990
  gene symbol: KMT2E
  hgvsc: ENST00000478990.1:c.343-25dupA
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000312379
  ensembl transcript: ENST00000311117
  gene symbol: KMT2E
  hgvsc: ENST00000311117.3:c.769-25dupA
  variant of: http://identifiers.org/hgnc/18541
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5684
  bin: 1.25e1
  variant carriers: 55
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1501
  bin: 1.75e1
  variant carriers: 125
genotype depth: GenotypeDepth
  all individuals: 486
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 503
  bin: 4.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 10691
  bin: 7.5e0
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 376
  bin: 4.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2098
  bin: 3.25e1
  variant carriers: 44
genotype depth: GenotypeDepth
  all individuals: 743
  bin: 3.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 30811
  bin: 2.25e1
  variant carriers: 133
genotype depth: GenotypeDepth
  all individuals: 6116
  bin: 2.75e1
  variant carriers: 89
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 345
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 5.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 367
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 11600
  bin: 2.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 1346
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2095
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 351
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2372
  bin: 9.75e1
  variant carriers: 490
num of homozygotes: 4
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: T
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: MQ

7-104717386-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 104717386
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 104717386
    reference: chr 7
allele count: 266
allele frequency: 2.627939142461964e-3
allele num: 101220
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417193
  ensembl transcript: ENST00000482560
  gene symbol: KMT2E
  hgvsc: ENST00000482560.2:c.*423-24C>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335599
  ensembl transcript: ENST00000334877
  gene symbol: KMT2E
  hgvsc: ENST00000334877.4:c.769-24C>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000257745
  ensembl transcript: ENST00000257745
  gene symbol: KMT2E
  hgvsc: ENST00000257745.4:c.769-24C>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000333986
  ensembl transcript: ENST00000334914
  gene symbol: KMT2E
  hgvsc: ENST00000334914.7:c.-2067-24C>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000419883
  ensembl transcript: ENST00000478990
  gene symbol: KMT2E
  hgvsc: ENST00000478990.1:c.343-24C>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335398
  ensembl transcript: ENST00000334884
  gene symbol: KMT2E
  hgvsc: ENST00000334884.5:c.769-24C>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000312379
  ensembl transcript: ENST00000311117
  gene symbol: KMT2E
  hgvsc: ENST00000311117.3:c.769-24C>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417888
  ensembl transcript: ENST00000476671
  gene symbol: KMT2E
  hgvsc: ENST00000476671.1:c.769-24C>G
  variant of: http://identifiers.org/hgnc/18541
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1299
  bin: 1.75e1
  variant carriers: 46
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 5.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2294
  bin: 3.25e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 6.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 4.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 5.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 4592
  bin: 1.25e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 4.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 3.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 9336
  bin: 7.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 32725
  bin: 2.25e1
  variant carriers: 58
genotype depth: GenotypeDepth
  all individuals: 6649
  bin: 2.75e1
  variant carriers: 38
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 9.75e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 465
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1796
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 417
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1410
  bin: 7.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 936
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 10046
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 5
population: Latino
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: C
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

7-104717386-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 104717386
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 104717386
    reference: chr 7
allele count: 1
allele frequency: 9.879470460383324e-6
allele num: 101220
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000257745
  ensembl transcript: ENST00000257745
  gene symbol: KMT2E
  hgvsc: ENST00000257745.4:c.769-24C>T
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335398
  ensembl transcript: ENST00000334884
  gene symbol: KMT2E
  hgvsc: ENST00000334884.5:c.769-24C>T
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335599
  ensembl transcript: ENST00000334877
  gene symbol: KMT2E
  hgvsc: ENST00000334877.4:c.769-24C>T
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417193
  ensembl transcript: ENST00000482560
  gene symbol: KMT2E
  hgvsc: ENST00000482560.2:c.*423-24C>T
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000333986
  ensembl transcript: ENST00000334914
  gene symbol: KMT2E
  hgvsc: ENST00000334914.7:c.-2067-24C>T
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417888
  ensembl transcript: ENST00000476671
  gene symbol: KMT2E
  hgvsc: ENST00000476671.1:c.769-24C>T
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000312379
  ensembl transcript: ENST00000311117
  gene symbol: KMT2E
  hgvsc: ENST00000311117.3:c.769-24C>T
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000419883
  ensembl transcript: ENST00000478990
  gene symbol: KMT2E
  hgvsc: ENST00000478990.1:c.343-24C>T
  variant of: http://identifiers.org/hgnc/18541
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1299
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32725
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 525
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 394
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6649
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4592
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9336
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2294
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 215
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 781
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 375
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 353
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1725
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 907
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 439
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 396
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 140
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 526
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 936
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: Other
population: European (Finnish)
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

7-104717388-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 104717388
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 104717388
    reference: chr 7
allele count: 8
allele frequency: 7.650670389992923e-5
allele num: 104566
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000419883
  ensembl transcript: ENST00000478990
  gene symbol: KMT2E
  hgvsc: ENST00000478990.1:c.343-22A>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335398
  ensembl transcript: ENST00000334884
  gene symbol: KMT2E
  hgvsc: ENST00000334884.5:c.769-22A>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335599
  ensembl transcript: ENST00000334877
  gene symbol: KMT2E
  hgvsc: ENST00000334877.4:c.769-22A>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000333986
  ensembl transcript: ENST00000334914
  gene symbol: KMT2E
  hgvsc: ENST00000334914.7:c.-2067-22A>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000257745
  ensembl transcript: ENST00000257745
  gene symbol: KMT2E
  hgvsc: ENST00000257745.4:c.769-22A>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000312379
  ensembl transcript: ENST00000311117
  gene symbol: KMT2E
  hgvsc: ENST00000311117.3:c.769-22A>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417193
  ensembl transcript: ENST00000482560
  gene symbol: KMT2E
  hgvsc: ENST00000482560.2:c.*423-22A>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417888
  ensembl transcript: ENST00000476671
  gene symbol: KMT2E
  hgvsc: ENST00000476671.1:c.769-22A>G
  variant of: http://identifiers.org/hgnc/18541
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 789
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3489
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6974
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2415
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 956
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 519
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7934
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35215
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34743
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 729
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 268
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 996
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 452
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1593
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: A
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: QD

7-104717391-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 104717391
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 104717391
    reference: chr 7
allele count: 1
allele frequency: 9.256859332765579e-6
allele num: 108028
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335599
  ensembl transcript: ENST00000334877
  gene symbol: KMT2E
  hgvsc: ENST00000334877.4:c.769-19G>T
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000419883
  ensembl transcript: ENST00000478990
  gene symbol: KMT2E
  hgvsc: ENST00000478990.1:c.343-19G>T
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000312379
  ensembl transcript: ENST00000311117
  gene symbol: KMT2E
  hgvsc: ENST00000311117.3:c.769-19G>T
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417888
  ensembl transcript: ENST00000476671
  gene symbol: KMT2E
  hgvsc: ENST00000476671.1:c.769-19G>T
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417193
  ensembl transcript: ENST00000482560
  gene symbol: KMT2E
  hgvsc: ENST00000482560.2:c.*423-19G>T
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335398
  ensembl transcript: ENST00000334884
  gene symbol: KMT2E
  hgvsc: ENST00000334884.5:c.769-19G>T
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000333986
  ensembl transcript: ENST00000334914
  gene symbol: KMT2E
  hgvsc: ENST00000334914.7:c.-2067-19G>T
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000257745
  ensembl transcript: ENST00000257745
  gene symbol: KMT2E
  hgvsc: ENST00000257745.4:c.769-19G>T
  variant of: http://identifiers.org/hgnc/18541
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 808
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6280
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2508
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 693
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37414
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2605
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7543
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1036
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6579
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1670
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 563
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 83
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2044
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: Other
population: Latino
reference allele: G
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum

7-104717392-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 104717392
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 104717392
    reference: chr 7
allele count: 1
allele frequency: 9.1441111923921e-6
allele num: 109360
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000333986
  ensembl transcript: ENST00000334914
  gene symbol: KMT2E
  hgvsc: ENST00000334914.7:c.-2067-18C>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000257745
  ensembl transcript: ENST00000257745
  gene symbol: KMT2E
  hgvsc: ENST00000257745.4:c.769-18C>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417888
  ensembl transcript: ENST00000476671
  gene symbol: KMT2E
  hgvsc: ENST00000476671.1:c.769-18C>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000419883
  ensembl transcript: ENST00000478990
  gene symbol: KMT2E
  hgvsc: ENST00000478990.1:c.343-18C>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335599
  ensembl transcript: ENST00000334877
  gene symbol: KMT2E
  hgvsc: ENST00000334877.4:c.769-18C>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335398
  ensembl transcript: ENST00000334884
  gene symbol: KMT2E
  hgvsc: ENST00000334884.5:c.769-18C>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417193
  ensembl transcript: ENST00000482560
  gene symbol: KMT2E
  hgvsc: ENST00000482560.2:c.*423-18C>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000312379
  ensembl transcript: ENST00000311117
  gene symbol: KMT2E
  hgvsc: ENST00000311117.3:c.769-18C>G
  variant of: http://identifiers.org/hgnc/18541
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 623
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5717
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7729
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38126
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2650
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2211
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 820
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 491
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 61
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 209
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1701
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5748
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
population: African
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: QD

7-104717396-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 104717396
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 104717396
    reference: chr 7
allele count: 1
allele frequency: 8.863990923273295e-6
allele num: 112816
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000257745
  ensembl transcript: ENST00000257745
  gene symbol: KMT2E
  hgvsc: ENST00000257745.4:c.769-14G>A
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000333986
  ensembl transcript: ENST00000334914
  gene symbol: KMT2E
  hgvsc: ENST00000334914.7:c.-2067-14G>A
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000312379
  ensembl transcript: ENST00000311117
  gene symbol: KMT2E
  hgvsc: ENST00000311117.3:c.769-14G>A
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000419883
  ensembl transcript: ENST00000478990
  gene symbol: KMT2E
  hgvsc: ENST00000478990.1:c.343-14G>A
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335599
  ensembl transcript: ENST00000334877
  gene symbol: KMT2E
  hgvsc: ENST00000334877.4:c.769-14G>A
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417193
  ensembl transcript: ENST00000482560
  gene symbol: KMT2E
  hgvsc: ENST00000482560.2:c.*423-14G>A
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417888
  ensembl transcript: ENST00000476671
  gene symbol: KMT2E
  hgvsc: ENST00000476671.1:c.769-14G>A
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335398
  ensembl transcript: ENST00000334884
  gene symbol: KMT2E
  hgvsc: ENST00000334884.5:c.769-14G>A
  variant of: http://identifiers.org/hgnc/18541
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40147
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1365
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8273
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4068
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2850
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 845
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1178
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1795
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1787
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 539
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40124
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: African
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum

7-104717396-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 104717396
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 104717396
    reference: chr 7
allele count: 1
allele frequency: 8.863990923273295e-6
allele num: 112816
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000257745
  ensembl transcript: ENST00000257745
  gene symbol: KMT2E
  hgvsc: ENST00000257745.4:c.769-14G>C
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417193
  ensembl transcript: ENST00000482560
  gene symbol: KMT2E
  hgvsc: ENST00000482560.2:c.*423-14G>C
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000333986
  ensembl transcript: ENST00000334914
  gene symbol: KMT2E
  hgvsc: ENST00000334914.7:c.-2067-14G>C
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000419883
  ensembl transcript: ENST00000478990
  gene symbol: KMT2E
  hgvsc: ENST00000478990.1:c.343-14G>C
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335599
  ensembl transcript: ENST00000334877
  gene symbol: KMT2E
  hgvsc: ENST00000334877.4:c.769-14G>C
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335398
  ensembl transcript: ENST00000334884
  gene symbol: KMT2E
  hgvsc: ENST00000334884.5:c.769-14G>C
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000312379
  ensembl transcript: ENST00000311117
  gene symbol: KMT2E
  hgvsc: ENST00000311117.3:c.769-14G>C
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417888
  ensembl transcript: ENST00000476671
  gene symbol: KMT2E
  hgvsc: ENST00000476671.1:c.769-14G>C
  variant of: http://identifiers.org/hgnc/18541
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 845
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 534
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8273
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40147
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1365
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4068
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2850
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1787
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1178
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1795
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 600
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2082
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: East Asian
population: Latino
population: South Asian
reference allele: G
site quality: FS
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum

7-104717399-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 104717399
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 104717399
    reference: chr 7
allele count: 3
allele frequency: 2.616248648271532e-5
allele num: 114668
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417193
  ensembl transcript: ENST00000482560
  gene symbol: KMT2E
  hgvsc: ENST00000482560.2:c.*423-11T>A
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417888
  ensembl transcript: ENST00000476671
  gene symbol: KMT2E
  hgvsc: ENST00000476671.1:c.769-11T>A
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000257745
  ensembl transcript: ENST00000257745
  gene symbol: KMT2E
  hgvsc: ENST00000257745.4:c.769-11T>A
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335398
  ensembl transcript: ENST00000334884
  gene symbol: KMT2E
  hgvsc: ENST00000334884.5:c.769-11T>A
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335599
  ensembl transcript: ENST00000334877
  gene symbol: KMT2E
  hgvsc: ENST00000334877.4:c.769-11T>A
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000333986
  ensembl transcript: ENST00000334914
  gene symbol: KMT2E
  hgvsc: ENST00000334914.7:c.-2067-11T>A
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000419883
  ensembl transcript: ENST00000478990
  gene symbol: KMT2E
  hgvsc: ENST00000478990.1:c.343-11T>A
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000312379
  ensembl transcript: ENST00000311117
  gene symbol: KMT2E
  hgvsc: ENST00000311117.3:c.769-11T>A
  variant of: http://identifiers.org/hgnc/18541
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41318
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3226
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 965
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8455
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2896
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1227
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 406
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3291
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41522
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
population: South Asian
reference allele: T
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: DP

7-104717400-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 104717400
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 104717400
    reference: chr 7
allele count: 1
allele frequency: 8.684475631361379e-6
allele num: 115148
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000333986
  ensembl transcript: ENST00000334914
  gene symbol: KMT2E
  hgvsc: ENST00000334914.7:c.-2067-10A>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000312379
  ensembl transcript: ENST00000311117
  gene symbol: KMT2E
  hgvsc: ENST00000311117.3:c.769-10A>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335599
  ensembl transcript: ENST00000334877
  gene symbol: KMT2E
  hgvsc: ENST00000334877.4:c.769-10A>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417888
  ensembl transcript: ENST00000476671
  gene symbol: KMT2E
  hgvsc: ENST00000476671.1:c.769-10A>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000419883
  ensembl transcript: ENST00000478990
  gene symbol: KMT2E
  hgvsc: ENST00000478990.1:c.343-10A>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000257745
  ensembl transcript: ENST00000257745
  gene symbol: KMT2E
  hgvsc: ENST00000257745.4:c.769-10A>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335398
  ensembl transcript: ENST00000334884
  gene symbol: KMT2E
  hgvsc: ENST00000334884.5:c.769-10A>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417193
  ensembl transcript: ENST00000482560
  gene symbol: KMT2E
  hgvsc: ENST00000482560.2:c.*423-10A>G
  variant of: http://identifiers.org/hgnc/18541
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 535
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 877
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2992
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8524
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2932
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41569
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 854
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1836
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 536
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 374
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3039
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Other
population: African
reference allele: A
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP

7-104717402-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 104717402
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 104717402
    reference: chr 7
allele count: 1
allele frequency: 8.619352169490942e-6
allele num: 116018
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417193
  ensembl transcript: ENST00000482560
  gene symbol: KMT2E
  hgvsc: ENST00000482560.2:c.*423-8G>T
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335398
  ensembl transcript: ENST00000334884
  gene symbol: KMT2E
  hgvsc: ENST00000334884.5:c.769-8G>T
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417888
  ensembl transcript: ENST00000476671
  gene symbol: KMT2E
  hgvsc: ENST00000476671.1:c.769-8G>T
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000312379
  ensembl transcript: ENST00000311117
  gene symbol: KMT2E
  hgvsc: ENST00000311117.3:c.769-8G>T
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000257745
  ensembl transcript: ENST00000257745
  gene symbol: KMT2E
  hgvsc: ENST00000257745.4:c.769-8G>T
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000419883
  ensembl transcript: ENST00000478990
  gene symbol: KMT2E
  hgvsc: ENST00000478990.1:c.343-8G>T
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000333986
  ensembl transcript: ENST00000334914
  gene symbol: KMT2E
  hgvsc: ENST00000334914.7:c.-2067-8G>T
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335599
  ensembl transcript: ENST00000334877
  gene symbol: KMT2E
  hgvsc: ENST00000334877.4:c.769-8G>T
  variant of: http://identifiers.org/hgnc/18541
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 357
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8649
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2550
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 388
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42010
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3014
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 332
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 310
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1874
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 2.5e0
  variant carriers: 0
hgvs: c.769-8G>T
num of homozygotes: 0
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: Other
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum

7-104717406-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 104717406
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 104717406
    reference: chr 7
allele count: 7
allele frequency: 5.964350226645308e-5
allele num: 117364
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417193
  ensembl transcript: ENST00000482560
  gene symbol: KMT2E
  hgvsc: ENST00000482560.2:c.*423-4T>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000333986
  ensembl transcript: ENST00000334914
  gene symbol: KMT2E
  hgvsc: ENST00000334914.7:c.-2067-4T>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000312379
  ensembl transcript: ENST00000311117
  gene symbol: KMT2E
  hgvsc: ENST00000311117.3:c.769-4T>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417888
  ensembl transcript: ENST00000476671
  gene symbol: KMT2E
  hgvsc: ENST00000476671.1:c.769-4T>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335599
  ensembl transcript: ENST00000334877
  gene symbol: KMT2E
  hgvsc: ENST00000334877.4:c.769-4T>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000419883
  ensembl transcript: ENST00000478990
  gene symbol: KMT2E
  hgvsc: ENST00000478990.1:c.343-4T>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000257745
  ensembl transcript: ENST00000257745
  gene symbol: KMT2E
  hgvsc: ENST00000257745.4:c.769-4T>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335398
  ensembl transcript: ENST00000334884
  gene symbol: KMT2E
  hgvsc: ENST00000334884.5:c.769-4T>G
  variant of: http://identifiers.org/hgnc/18541
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3073
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42541
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1939
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 541
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 360
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8955
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 883
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 204
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1285
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 559
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43064
  bin: 6.25e1
  variant carriers: 0
hgvs: c.769-4T>G
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Other
population: Latino
population: East Asian
population: South Asian
reference allele: T
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP

7-104717411-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 104717411
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 104717411
    reference: chr 7
allele count: 19
allele frequency: 1.600727909954843e-4
allele num: 118696
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335398
  ensembl transcript: ENST00000334884
  gene symbol: KMT2E
  hgvsc: ENST00000334884.5:c.770G>A
  hgvsp: ENSP00000335398.5:p.Gly257Asp
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000419883
  ensembl transcript: ENST00000478990
  gene symbol: KMT2E
  hgvsc: ENST00000478990.1:c.344G>A
  hgvsp: ENSP00000419883.1:p.Gly115Asp
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000257745
  ensembl transcript: ENST00000257745
  gene symbol: KMT2E
  hgvsc: ENST00000257745.4:c.770G>A
  hgvsp: ENSP00000257745.4:p.Gly257Asp
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417193
  ensembl transcript: ENST00000482560
  gene symbol: KMT2E
  hgvsc: ENST00000482560.2:c.*424G>A
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335599
  ensembl transcript: ENST00000334877
  gene symbol: KMT2E
  hgvsc: ENST00000334877.4:c.770G>A
  hgvsp: ENSP00000335599.4:p.Gly257Asp
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417888
  ensembl transcript: ENST00000476671
  gene symbol: KMT2E
  hgvsc: ENST00000476671.1:c.770G>A
  hgvsp: ENSP00000417888.1:p.Gly257Asp
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000312379
  ensembl transcript: ENST00000311117
  gene symbol: KMT2E
  hgvsc: ENST00000311117.3:c.770G>A
  hgvsp: ENSP00000312379.3:p.Gly257Asp
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000333986
  ensembl transcript: ENST00000334914
  gene symbol: KMT2E
  hgvsc: ENST00000334914.7:c.-2066G>A
  variant of: http://identifiers.org/hgnc/18541
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 368
  bin: 5.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1294
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9269
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3228
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 558
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 911
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42881
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43581
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 47
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Gly257Asp
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: Other
population: South Asian
reference allele: G
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum

7-104717412-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 104717412
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 104717412
    reference: chr 7
allele count: 1
allele frequency: 8.413400864897609e-6
allele num: 118858
alternate allele: A
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000257745
  ensembl transcript: ENST00000257745
  gene symbol: KMT2E
  hgvsc: ENST00000257745.4:c.771T>A
  hgvsp: ENST00000257745.4:c.771T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417193
  ensembl transcript: ENST00000482560
  gene symbol: KMT2E
  hgvsc: ENST00000482560.2:c.*425T>A
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417888
  ensembl transcript: ENST00000476671
  gene symbol: KMT2E
  hgvsc: ENST00000476671.1:c.771T>A
  hgvsp: ENST00000476671.1:c.771T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335599
  ensembl transcript: ENST00000334877
  gene symbol: KMT2E
  hgvsc: ENST00000334877.4:c.771T>A
  hgvsp: ENST00000334877.4:c.771T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: synonymous_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335398
  ensembl transcript: ENST00000334884
  gene symbol: KMT2E
  hgvsc: ENST00000334884.5:c.771T>A
  hgvsp: ENST00000334884.5:c.771T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: true
  clinical significance: not_provided
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000312379
  ensembl transcript: ENST00000311117
  gene symbol: KMT2E
  hgvsc: ENST00000311117.3:c.771T>A
  hgvsp: ENST00000311117.3:c.771T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000419883
  ensembl transcript: ENST00000478990
  gene symbol: KMT2E
  hgvsc: ENST00000478990.1:c.345T>A
  hgvsp: ENST00000478990.1:c.345T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000333986
  ensembl transcript: ENST00000334914
  gene symbol: KMT2E
  hgvsc: ENST00000334914.7:c.-2065T>A
  variant of: http://identifiers.org/hgnc/18541
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3234
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 42917
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1224
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9305
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 5.25e1
  variant carriers: 0
hgvs: c.771T>A
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
population: Latino
population: Other
reference allele: T
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: BaseQRankSum

7-104717412-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 104717412
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 104717412
    reference: chr 7
allele count: 41
allele frequency: 3.44949435460802e-4
allele num: 118858
alternate allele: C
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417193
  ensembl transcript: ENST00000482560
  gene symbol: KMT2E
  hgvsc: ENST00000482560.2:c.*425T>C
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000257745
  ensembl transcript: ENST00000257745
  gene symbol: KMT2E
  hgvsc: ENST00000257745.4:c.771T>C
  hgvsp: ENST00000257745.4:c.771T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: synonymous_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335398
  ensembl transcript: ENST00000334884
  gene symbol: KMT2E
  hgvsc: ENST00000334884.5:c.771T>C
  hgvsp: ENST00000334884.5:c.771T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000419883
  ensembl transcript: ENST00000478990
  gene symbol: KMT2E
  hgvsc: ENST00000478990.1:c.345T>C
  hgvsp: ENST00000478990.1:c.345T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: splice_region_variant
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000333986
  ensembl transcript: ENST00000334914
  gene symbol: KMT2E
  hgvsc: ENST00000334914.7:c.-2065T>C
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: true
  clinical significance: not_provided
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000312379
  ensembl transcript: ENST00000311117
  gene symbol: KMT2E
  hgvsc: ENST00000311117.3:c.771T>C
  hgvsp: ENST00000311117.3:c.771T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417888
  ensembl transcript: ENST00000476671
  gene symbol: KMT2E
  hgvsc: ENST00000476671.1:c.771T>C
  hgvsp: ENST00000476671.1:c.771T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  clinical significance: not_provided
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335599
  ensembl transcript: ENST00000334877
  gene symbol: KMT2E
  hgvsc: ENST00000334877.4:c.771T>C
  hgvsp: ENST00000334877.4:c.771T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18541
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3234
  bin: 3.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9305
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 373
  bin: 5.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42917
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1224
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 3.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 4.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 3.75e1
  variant carriers: 0
hgvs: c.771T>C
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: East Asian
population: Latino
population: South Asian
population: European (Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD

7-104717425-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 104717425
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 104717425
    reference: chr 7
allele count: 1
allele frequency: 8.323068215867098e-6
allele num: 120148
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417888
  ensembl transcript: ENST00000476671
  gene symbol: KMT2E
  hgvsc: ENST00000476671.1:c.784A>G
  hgvsp: ENSP00000417888.1:p.Ile262Val
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000419883
  ensembl transcript: ENST00000478990
  gene symbol: KMT2E
  hgvsc: ENST00000478990.1:c.358A>G
  hgvsp: ENSP00000419883.1:p.Ile120Val
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000312379
  ensembl transcript: ENST00000311117
  gene symbol: KMT2E
  hgvsc: ENST00000311117.3:c.784A>G
  hgvsp: ENSP00000312379.3:p.Ile262Val
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335599
  ensembl transcript: ENST00000334877
  gene symbol: KMT2E
  hgvsc: ENST00000334877.4:c.784A>G
  hgvsp: ENSP00000335599.4:p.Ile262Val
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335398
  ensembl transcript: ENST00000334884
  gene symbol: KMT2E
  hgvsc: ENST00000334884.5:c.784A>G
  hgvsp: ENSP00000335398.5:p.Ile262Val
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000257745
  ensembl transcript: ENST00000257745
  gene symbol: KMT2E
  hgvsc: ENST00000257745.4:c.784A>G
  hgvsp: ENSP00000257745.4:p.Ile262Val
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000333986
  ensembl transcript: ENST00000334914
  gene symbol: KMT2E
  hgvsc: ENST00000334914.7:c.-2052A>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417193
  ensembl transcript: ENST00000482560
  gene symbol: KMT2E
  hgvsc: ENST00000482560.2:c.*438A>G
  variant of: http://identifiers.org/hgnc/18541
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 955
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 53
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 117
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43253
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9626
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 617
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3354
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 603
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 605
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ile262Val
num of homozygotes: 0
population: African
population: Latino
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: A
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ

7-104717430-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 104717430
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 104717430
    reference: chr 7
allele count: 1
allele frequency: 8.313242996092776e-6
allele num: 120290
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417193
  ensembl transcript: ENST00000482560
  gene symbol: KMT2E
  hgvsc: ENST00000482560.2:c.*443T>C
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335398
  ensembl transcript: ENST00000334884
  gene symbol: KMT2E
  hgvsc: ENST00000334884.5:c.789T>C
  hgvsp: ENST00000334884.5:c.789T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000333986
  ensembl transcript: ENST00000334914
  gene symbol: KMT2E
  hgvsc: ENST00000334914.7:c.-2047T>C
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335599
  ensembl transcript: ENST00000334877
  gene symbol: KMT2E
  hgvsc: ENST00000334877.4:c.789T>C
  hgvsp: ENST00000334877.4:c.789T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000312379
  ensembl transcript: ENST00000311117
  gene symbol: KMT2E
  hgvsc: ENST00000311117.3:c.789T>C
  hgvsp: ENST00000311117.3:c.789T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000257745
  ensembl transcript: ENST00000257745
  gene symbol: KMT2E
  hgvsc: ENST00000257745.4:c.789T>C
  hgvsp: ENST00000257745.4:c.789T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000419883
  ensembl transcript: ENST00000478990
  gene symbol: KMT2E
  hgvsc: ENST00000478990.1:c.363T>C
  hgvsp: ENST00000478990.1:c.363T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417888
  ensembl transcript: ENST00000476671
  gene symbol: KMT2E
  hgvsc: ENST00000476671.1:c.789T>C
  hgvsp: ENST00000476671.1:c.789T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/18541
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 546
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 47
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 370
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43256
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9679
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 958
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3372
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1373
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2031
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Asp263Asp
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP

7-104717431-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 104717431
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 104717431
    reference: chr 7
allele count: 1
allele frequency: 8.310893919750009e-6
allele num: 120324
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000312379
  ensembl transcript: ENST00000311117
  gene symbol: KMT2E
  hgvsc: ENST00000311117.3:c.790C>T
  hgvsp: ENSP00000312379.3:p.Pro264Ser
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000257745
  ensembl transcript: ENST00000257745
  gene symbol: KMT2E
  hgvsc: ENST00000257745.4:c.790C>T
  hgvsp: ENSP00000257745.4:p.Pro264Ser
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417888
  ensembl transcript: ENST00000476671
  gene symbol: KMT2E
  hgvsc: ENST00000476671.1:c.790C>T
  hgvsp: ENSP00000417888.1:p.Pro264Ser
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335599
  ensembl transcript: ENST00000334877
  gene symbol: KMT2E
  hgvsc: ENST00000334877.4:c.790C>T
  hgvsp: ENSP00000335599.4:p.Pro264Ser
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000333986
  ensembl transcript: ENST00000334914
  gene symbol: KMT2E
  hgvsc: ENST00000334914.7:c.-2046C>T
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000419883
  ensembl transcript: ENST00000478990
  gene symbol: KMT2E
  hgvsc: ENST00000478990.1:c.364C>T
  hgvsp: ENSP00000419883.1:p.Pro122Ser
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335398
  ensembl transcript: ENST00000334884
  gene symbol: KMT2E
  hgvsc: ENST00000334884.5:c.790C>T
  hgvsp: ENSP00000335398.5:p.Pro264Ser
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417193
  ensembl transcript: ENST00000482560
  gene symbol: KMT2E
  hgvsc: ENST00000482560.2:c.*444C>T
  variant of: http://identifiers.org/hgnc/18541
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 236
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43259
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3373
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 962
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 567
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 412
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9689
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44337
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Pro264Ser
num of homozygotes: 0
population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: European (Finnish)
reference allele: C
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: ReadPosRankSum

7-104717438-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 104717438
    reference: chr 7
  end: Position
    type: ExactPosition
    position: 104717438
    reference: chr 7
allele count: 2
allele frequency: 1.659365458648613e-5
allele num: 120528
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000419883
  ensembl transcript: ENST00000478990
  gene symbol: KMT2E
  hgvsc: ENST00000478990.1:c.371C>G
  hgvsp: ENSP00000419883.1:p.Ser124Cys
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000312379
  ensembl transcript: ENST00000311117
  gene symbol: KMT2E
  hgvsc: ENST00000311117.3:c.797C>G
  hgvsp: ENSP00000312379.3:p.Ser266Cys
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000257745
  ensembl transcript: ENST00000257745
  gene symbol: KMT2E
  hgvsc: ENST00000257745.4:c.797C>G
  hgvsp: ENSP00000257745.4:p.Ser266Cys
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417888
  ensembl transcript: ENST00000476671
  gene symbol: KMT2E
  hgvsc: ENST00000476671.1:c.797C>G
  hgvsp: ENSP00000417888.1:p.Ser266Cys
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335599
  ensembl transcript: ENST00000334877
  gene symbol: KMT2E
  hgvsc: ENST00000334877.4:c.797C>G
  hgvsp: ENSP00000335599.4:p.Ser266Cys
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000335398
  ensembl transcript: ENST00000334884
  gene symbol: KMT2E
  hgvsc: ENST00000334884.5:c.797C>G
  hgvsp: ENSP00000335398.5:p.Ser266Cys
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000333986
  ensembl transcript: ENST00000334914
  gene symbol: KMT2E
  hgvsc: ENST00000334914.7:c.-2039C>G
  variant of: http://identifiers.org/hgnc/18541
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000005483
  ensembl protein: ENSP00000417193
  ensembl transcript: ENST00000482560
  gene symbol: KMT2E
  hgvsc: ENST00000482560.2:c.*451C>G
  variant of: http://identifiers.org/hgnc/18541
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43313
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9745
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 66
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 82
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 966
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 110
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Ser266Cys
num of homozygotes: 0
reference allele: C

GenotypeQuality
all individuals: 861
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1733
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1350
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16044
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 895
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3333
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 479
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3600
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 878
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22135
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 232
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 511
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 755
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.718803712616019e-5
allele num: 58180
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 3.88e1

VQSLOD
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: -4.18e-1

ClippingRankSum
type: SiteQuality
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InbreedingCoeff
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QD
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BaseQRankSum
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FS
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: -9.88e-1

DP
type: SiteQuality
SIO_000300: 1.33356e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 10196
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9098
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.732741890767951e-5
allele num: 57712
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6322
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.3e-3

BaseQRankSum
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ClippingRankSum
type: SiteQuality
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ReadPosRankSum
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DP
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MQRankSum
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FS
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VQSLOD
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QD
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MQ
type: SiteQuality
SIO_000300: 5.635e1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
allele num: 9944
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 1.777588168373151e-5
allele num: 56256
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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Other
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InbreedingCoeff
type: SiteQuality
SIO_000300: -3.9e-3

MQ
type: SiteQuality
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DP
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MQRankSum
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FS
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ReadPosRankSum
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BaseQRankSum
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VQSLOD
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ClippingRankSum
type: SiteQuality
SIO_000300: -8.110000000000001e-1

QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.849522823111637e-5
allele num: 54068
num of homozygotes: 0

African
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 730
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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ClippingRankSum
type: SiteQuality
SIO_000300: -3.07e-1

BaseQRankSum
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SIO_000300: -1.359e0

MQ
type: SiteQuality
SIO_000300: 5.901e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.2e-3

VQSLOD
type: SiteQuality
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QD
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: 4.4e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.091457e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.07e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 9814
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.884019744526923e-5
allele num: 53078
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 712
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9416
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.9e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
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DP
type: SiteQuality
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QD
type: SiteQuality
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VQSLOD
type: SiteQuality
SIO_000300: -5.278e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.48e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.001e0

BaseQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 3.522e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6064
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 686
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.962400408179285e-5
allele num: 50958
num of homozygotes: 0

East Asian
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South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9094
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African
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allele count: 0
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MQRankSum
type: SiteQuality
SIO_000300: 1.99e0

BaseQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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MQ
type: SiteQuality
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QD
type: SiteQuality
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FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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DP
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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Other
type: Population
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Latino
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African
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allele frequency: 1.339503166098393e-3
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East Asian
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European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.979782703864369e-5
allele num: 50254
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European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.45e-1

FS
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MQ
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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MQRankSum
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VQSLOD
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DP
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InbreedingCoeff
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BaseQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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European (Non-Finnish)
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Latino
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East Asian
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European (Finnish)
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South Asian
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
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DP
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ClippingRankSum
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QD
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FS
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MQRankSum
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MQ
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BaseQRankSum
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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African
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Other
type: Population
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European (Non-Finnish)
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South Asian
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Latino
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European (Finnish)
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MQRankSum
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BaseQRankSum
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InbreedingCoeff
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ClippingRankSum
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FS
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ReadPosRankSum
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DP
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MQ
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QD
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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African
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East Asian
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European (Non-Finnish)
type: Population
allele count: 0
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6320
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.2e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.55328e6

ClippingRankSum
type: SiteQuality
SIO_000300: 9.72e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.42e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.9e0

QD
type: SiteQuality
SIO_000300: 1.094e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.22e0

GenotypeQuality
all individuals: 4451
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1770
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 919
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15542
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10800
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 60268
num of homozygotes: 0

East Asian
type: Population
allele count: 5
allele frequency: 6.201935003721161e-4
allele num: 8062
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6342
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9736
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 9.18e-1

QD
type: SiteQuality
SIO_000300: 2.892e1

VQSLOD
type: SiteQuality
SIO_000300: 2.29e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.06e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.46e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.35e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-4

DP
type: SiteQuality
SIO_000300: 1.626812e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.11e-1

GenotypeQuality
all individuals: 77
bin: 2.5e0
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4410
bin: 2.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.660688189185599e-5
allele num: 60216
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15548
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10802
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6326
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8056
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9738
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.57e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.16e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.82e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.4e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.94e-1

QD
type: SiteQuality
SIO_000300: 9.74e0

FS
type: SiteQuality
SIO_000300: 1.965e0

DP
type: SiteQuality
SIO_000300: 1.637496e6

ClippingRankSum
type: SiteQuality
SIO_000300: -5.72e-1

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3963
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1340
bin: 7.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10802
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8056
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6326
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.660688189185599e-5
allele num: 60216
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9738
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15548
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.965e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 4.57e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.94e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.72e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.16e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.82e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.4e-3

DP
type: SiteQuality
SIO_000300: 1.637496e6

QD
type: SiteQuality
SIO_000300: 9.74e0

GenotypeQuality
all individuals: 218
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3999
bin: 3.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 6

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2218
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 160
bin: 1.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15548
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6326
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8056
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.964129135113592e-5
allele num: 60216
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9738
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10802
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 868
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.94e-1

DP
type: SiteQuality
SIO_000300: 1.637496e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.82e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 4.57e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.4e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -5.72e-1

FS
type: SiteQuality
SIO_000300: 1.965e0

VQSLOD
type: SiteQuality
SIO_000300: 2.16e0

QD
type: SiteQuality
SIO_000300: 9.74e0

GenotypeQuality
all individuals: 1557
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 312
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4297
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 917
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variant carriers: 0

GenotypeQuality
all individuals: 653
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 55
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variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 1.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.011940902651285e-4
allele num: 9882
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61426
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15700
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10912
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8210
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6390
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.156e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 2.47e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.4e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.535e0

DP
type: SiteQuality
SIO_000300: 1.710934e6

MQRankSum
type: SiteQuality
SIO_000300: 6.98e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.61e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.2e-1

GenotypeQuality
all individuals: 70
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 917
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2457
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 137
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GenotypeQuality
all individuals: 3729
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GenotypeQuality
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bin: 6.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1515
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 653
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GenotypeQuality
all individuals: 407
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10912
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15700
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6390
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8210
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61426
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 3.035822707953856e-4
allele num: 9882
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.535e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.61e-1

QD
type: SiteQuality
SIO_000300: 1.156e1

MQRankSum
type: SiteQuality
SIO_000300: 6.98e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.2e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.4e-3

DP
type: SiteQuality
SIO_000300: 1.710934e6

VQSLOD
type: SiteQuality
SIO_000300: 2.47e0

GenotypeQuality
all individuals: 3729
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 55
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 464
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 290
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1515
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1341
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1801
bin: 7.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15700
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.832844574780059e-4
allele num: 10912
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9882
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6390
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8210
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61426
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.47e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.2e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.4e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 6.98e-1

QD
type: SiteQuality
SIO_000300: 1.156e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.535e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.61e-1

DP
type: SiteQuality
SIO_000300: 1.710934e6

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 386
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 6789
bin: 9.75e1
variant carriers: 33

GenotypeQuality
all individuals: 33996
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 9.104151493080845e-5
allele num: 10984
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6416
num of homozygotes: 0

African
type: Population
allele count: 31
allele frequency: 3.108704372242279e-3
allele num: 9972
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.223310985043837e-5
allele num: 62048
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15774
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8252
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.68e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.8e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.78e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.54e-1

DP
type: SiteQuality
SIO_000300: 1.730967e6

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.67e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.91e0

QD
type: SiteQuality
SIO_000300: 1.36e1

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1358
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 455
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GenotypeQuality
all individuals: 85
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variant carriers: 0

GenotypeQuality
all individuals: 42
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GenotypeQuality
all individuals: 116
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GenotypeQuality
all individuals: 8
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variant carriers: 0

GenotypeQuality
all individuals: 19
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variant carriers: 0

GenotypeQuality
all individuals: 1457
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GenotypeQuality
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GenotypeQuality
all individuals: 380
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GenotypeQuality
all individuals: 4625
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 13
allele frequency: 8.062515504837509e-4
allele num: 16124
num of homozygotes: 0

African
type: Population
allele count: 6
allele frequency: 5.875440658049354e-4
allele num: 10212
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.89521437466643e-5
allele num: 11242
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 58
allele frequency: 9.006211180124223e-4
allele num: 64400
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.121076233183856e-3
allele num: 892
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6516
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8488
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.62e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.19e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.37e-1

QD
type: SiteQuality
SIO_000300: 1.198e1

MQRankSum
type: SiteQuality
SIO_000300: 1.74e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.399999999999999e-3

DP
type: SiteQuality
SIO_000300: 1.796518e6

VQSLOD
type: SiteQuality
SIO_000300: 3.85e0

FS
type: SiteQuality
SIO_000300: 1.263e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 163
bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1364
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 207
bin: 3.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8492
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6524
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10226
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16130
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11252
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.549907005579665e-5
allele num: 64520
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.6e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.09e0

VQSLOD
type: SiteQuality
SIO_000300: 5.590000000000001e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.44e0

DP
type: SiteQuality
SIO_000300: 1.797249e6

MQRankSum
type: SiteQuality
SIO_000300: 5.96e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 3.546e0

QD
type: SiteQuality
SIO_000300: 1.404e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.923e0

GenotypeQuality
all individuals: 213
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64700
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6532
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11272
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8506
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16156
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.761811792268645e-5
allele num: 10244
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.625e0

MQRankSum
type: SiteQuality
SIO_000300: 5.21e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

VQSLOD
type: SiteQuality
SIO_000300: 2.27e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.62e-1

FS
type: SiteQuality
SIO_000300: 2.744e0

MQ
type: SiteQuality
SIO_000300: 5.953e1

DP
type: SiteQuality
SIO_000300: 1.801762e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.1e-2

QD
type: SiteQuality
SIO_000300: 9.470000000000001e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8506
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64700
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10244
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11272
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.189650903689032e-5
allele num: 16156
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6532
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

FS
type: SiteQuality
SIO_000300: 2.744e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.1e-2

MQ
type: SiteQuality
SIO_000300: 5.953e1

VQSLOD
type: SiteQuality
SIO_000300: 2.27e0

MQRankSum
type: SiteQuality
SIO_000300: 5.21e-1

QD
type: SiteQuality
SIO_000300: 9.470000000000001e0

DP
type: SiteQuality
SIO_000300: 1.801762e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.625e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.62e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16156
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10244
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11272
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6532
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8506
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.545595054095827e-5
allele num: 64700
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.744e0

VQSLOD
type: SiteQuality
SIO_000300: 2.27e0

MQ
type: SiteQuality
SIO_000300: 5.953e1

QD
type: SiteQuality
SIO_000300: 9.470000000000001e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.6e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 6.62e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.625e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.1e-2

MQRankSum
type: SiteQuality
SIO_000300: 5.21e-1

DP
type: SiteQuality
SIO_000300: 1.801762e6

GenotypeQuality
all individuals: 164
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.138735420503377e-5
allele num: 16290
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10282
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8548
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11368
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65598
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.4e-3

VQSLOD
type: SiteQuality
SIO_000300: -2.333e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 9.5e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.03e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.46e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.818836e6

QD
type: SiteQuality
SIO_000300: 5.99e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.44e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 12

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8548
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 10
allele frequency: 1.523136442562525e-4
allele num: 65654
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 3.038590094196293e-4
allele num: 6582
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11376
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10290
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16296
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BaseQRankSum
type: SiteQuality
SIO_000300: -9.0e-2

DP
type: SiteQuality
SIO_000300: 1.820019e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.71e-1

QD
type: SiteQuality
SIO_000300: 1.077e1

MQRankSum
type: SiteQuality
SIO_000300: 5.639999999999999e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

MQ
type: SiteQuality
SIO_000300: 5.934e1

VQSLOD
type: SiteQuality
SIO_000300: 3.27e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11376
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.523136442562525e-5
allele num: 65654
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16296
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8548
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10290
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QD
type: SiteQuality
SIO_000300: 1.077e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.71e-1

DP
type: SiteQuality
SIO_000300: 1.820019e6

MQ
type: SiteQuality
SIO_000300: 5.934e1

MQRankSum
type: SiteQuality
SIO_000300: 5.639999999999999e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.53e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -9.0e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 3.27e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
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allele count: 1
allele frequency: 9.710623422023694e-5
allele num: 10298
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65704
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11372
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8546
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.820522e6

FS
type: SiteQuality
SIO_000300: 3.069e0

MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.899e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.7e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.112e0

QD
type: SiteQuality
SIO_000300: 6.8e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8532
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.146281499692685e-5
allele num: 16270
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65516
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11334
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10296
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6580
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.391e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 6.68e0

VQSLOD
type: SiteQuality
SIO_000300: -1.631e0

MQRankSum
type: SiteQuality
SIO_000300: 5.77e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.79e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.155e0

MQ
type: SiteQuality
SIO_000300: 5.913e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.99e-1

DP
type: SiteQuality
SIO_000300: 1.816306e6

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 336
bin: 3.25e1
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GenotypeQuality
all individuals: 40135
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11324
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8528
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6578
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.055954527396632e-5
allele num: 65446
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16256
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10292
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 7.95e-1

DP
type: SiteQuality
SIO_000300: 1.813454e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.2e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -7.03e-1

QD
type: SiteQuality
SIO_000300: 1.227e1

FS
type: SiteQuality
SIO_000300: 2.702e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.43e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.26e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10292
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8528
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11324
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.527977263698316e-5
allele num: 65446
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6578
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16256
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.227e1

MQRankSum
type: SiteQuality
SIO_000300: -7.03e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.95e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.2e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.43e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.26e-1

DP
type: SiteQuality
SIO_000300: 1.813454e6

FS
type: SiteQuality
SIO_000300: 2.702e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10290
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.17343346632246e-4
allele num: 8522
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6574
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16238
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11310
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65354
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.96e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.14e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.299e1

VQSLOD
type: SiteQuality
SIO_000300: 1.09e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.65e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.291e0

DP
type: SiteQuality
SIO_000300: 1.809136e6

FS
type: SiteQuality
SIO_000300: 1.204e0

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 2
allele frequency: 1.950838860710105e-4
allele num: 10252
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64706
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11248
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16114
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8486
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6544
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.06e0

DP
type: SiteQuality
SIO_000300: 1.778021e6

MQ
type: SiteQuality
SIO_000300: 5.929e1

MQRankSum
type: SiteQuality
SIO_000300: 1.74e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.17e-1

QD
type: SiteQuality
SIO_000300: 1.228e1

VQSLOD
type: SiteQuality
SIO_000300: 1.2e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.4e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.68e-1

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16108
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11226
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10234
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6534
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.549378699141644e-5
allele num: 64542
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8466
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 7.12e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.5e-3

DP
type: SiteQuality
SIO_000300: 1.765514e6

VQSLOD
type: SiteQuality
SIO_000300: 2.22e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.48e0

ClippingRankSum
type: SiteQuality
SIO_000300: -8.400000000000001e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.12e-1

QD
type: SiteQuality
SIO_000300: 1.155e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11186
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8446
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6530
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.788566953797964e-5
allele num: 10216
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16060
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64368
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -8.2e-2

InbreedingCoeff
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: 2.78e0

QD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -8.169999999999999e-1

DP
type: SiteQuality
SIO_000300: 1.747071e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6520
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11172
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8432
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.800078400627205e-5
allele num: 10204
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64242
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16044
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.737805e6

QD
type: SiteQuality
SIO_000300: 1.329e1

VQSLOD
type: SiteQuality
SIO_000300: 1.06e0

MQRankSum
type: SiteQuality
SIO_000300: 9.49e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.31e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.659999999999999e-1

MQ
type: SiteQuality
SIO_000300: 5.907e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.167e0

FS
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 5.5e-3

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11152
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64186
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6520
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10200
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South Asian
type: Population
allele count: 1
allele frequency: 6.239860227130913e-5
allele num: 16026
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.001e1

BaseQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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DP
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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FS
type: SiteQuality
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MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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QD
type: SiteQuality
SIO_000300: 1.26e1

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.371916508538899e-4
allele num: 8432
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11152
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16026
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6520
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10200
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64186
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.731727e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.9e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.55e0

MQRankSum
type: SiteQuality
SIO_000300: -5.8e-2

FS
type: SiteQuality
SIO_000300: 8.159000000000001e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.9e-3

MQ
type: SiteQuality
SIO_000300: 6.001e1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.96e-1

QD
type: SiteQuality
SIO_000300: 1.26e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.02e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16026
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6520
num of homozygotes: 0

African
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allele count: 2
allele frequency: 1.96078431372549e-4
allele num: 10200
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64160
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8422
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11154
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 7.1e-1

FS
type: SiteQuality
SIO_000300: 4.149e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.58e0

MQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
SIO_000300: 8.8e-1

DP
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ClippingRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-4

QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6498
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8384
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10172
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.570598397989634e-5
allele num: 63670
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15936
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11092
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 882
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
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ClippingRankSum
type: SiteQuality
SIO_000300: -7.88e-1

QD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 3.411e0

MQRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.034e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.83e0

DP
type: SiteQuality
SIO_000300: 1.659931e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.93e0

VQSLOD
type: SiteQuality
SIO_000300: 1.24e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11088
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10172
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.575795776867318e-5
allele num: 63460
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8362
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15910
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6496
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.17e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.749e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -8.058e-1

QD
type: SiteQuality
SIO_000300: 7.59e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.5e-3

MQRankSum
type: SiteQuality
SIO_000300: -7.17e-1

DP
type: SiteQuality
SIO_000300: 1.648381e6

ClippingRankSum
type: SiteQuality
SIO_000300: 3.87e-1

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8372
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.575497857322914e-5
allele num: 63472
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11056
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6490
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15936
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10154
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.634205e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.491e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 7.91e-1

FS
type: SiteQuality
SIO_000300: 3.274e0

MQRankSum
type: SiteQuality
SIO_000300: -3.37e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.65e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.3e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 6.8e-3

QD
type: SiteQuality
SIO_000300: 1.356e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.25e1
variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6482
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11058
num of homozygotes: 0

European (Non-Finnish)
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allele count: 3
allele frequency: 4.735894926277902e-5
allele num: 63346
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8362
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10156
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 876
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.3e-3

BaseQRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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FS
type: SiteQuality
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MQ
type: SiteQuality
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DP
type: SiteQuality
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VQSLOD
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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QD
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ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 534
num of homozygotes: 0

African
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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South Asian
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 39202
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 6124
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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ClippingRankSum
type: SiteQuality
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QD
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BaseQRankSum
type: SiteQuality
SIO_000300: -6.840000000000001e-1

InbreedingCoeff
type: SiteQuality
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DP
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VQSLOD
type: SiteQuality
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FS
type: SiteQuality
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MQRankSum
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ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
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GenotypeQuality
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variant carriers: 2

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 40660
num of homozygotes: 0

Latino
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African
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European (Finnish)
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South Asian
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East Asian
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Other
type: Population
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QD
type: SiteQuality
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MQ
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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VQSLOD
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DP
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ReadPosRankSum
type: SiteQuality
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FS
type: SiteQuality
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MQRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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South Asian
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European (Finnish)
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Other
type: Population
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European (Non-Finnish)
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Latino
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African
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QD
type: SiteQuality
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FS
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
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DP
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MQRankSum
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BaseQRankSum
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VQSLOD
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ClippingRankSum
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 8

GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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European (Finnish)
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East Asian
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allele frequency: 4.655493482309125e-4
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South Asian
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African
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allele frequency: 3.556187766714083e-4
allele num: 5624
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Other
type: Population
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allele num: 556
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Latino
type: Population
allele count: 1
allele frequency: 1.596933886937081e-4
allele num: 6262
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ReadPosRankSum
type: SiteQuality
SIO_000300: -2.176e0

MQRankSum
type: SiteQuality
SIO_000300: -2.84e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.77e-2

DP
type: SiteQuality
SIO_000300: 9.0485e5

MQ
type: SiteQuality
SIO_000300: 5.685e1

QD
type: SiteQuality
SIO_000300: 4.88e0

VQSLOD
type: SiteQuality
SIO_000300: -1.786e1

FS
type: SiteQuality
SIO_000300: 5.5422e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.05e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.44e0

GenotypeQuality
all individuals: 472
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19397
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1266
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 198
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1707
bin: 9.75e1
variant carriers: 8

GenotypeQuality
all individuals: 5851
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 424
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 5732
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1830
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1999
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 510
bin: 7.75e1
variant carriers: 1

East Asian
type: Population
allele count: 2
allele frequency: 4.478280340349306e-4
allele num: 4466
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4044
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 3.435245620061835e-4
allele num: 5822
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 42166
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 5.370569280343716e-4
allele num: 9310
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.498351813005694e-4
allele num: 6674
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 606
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.43e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.7e-2

VQSLOD
type: SiteQuality
SIO_000300: -1.416e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.325e0

QD
type: SiteQuality
SIO_000300: 5.14e0

MQ
type: SiteQuality
SIO_000300: 5.705e1

DP
type: SiteQuality
SIO_000300: 9.13715e5

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.98e-2

FS
type: SiteQuality
SIO_000300: 4.6639e1

MQRankSum
type: SiteQuality
SIO_000300: 2.83e-1

GenotypeQuality
all individuals: 1182
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 168
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 223
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 427
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1302
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 19941
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 583
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5669
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 244
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1704
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3752
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6398
bin: 3.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6200
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 632
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 2.053388090349076e-4
allele num: 4870
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7172
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4252
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.72762645914397e-5
allele num: 10280
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 44528
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.586e1

QD
type: SiteQuality
SIO_000300: 1.165e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.072e0

VQSLOD
type: SiteQuality
SIO_000300: -3.056e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.72e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.08e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.866e0

DP
type: SiteQuality
SIO_000300: 9.49552e5

GenotypeQuality
all individuals: 673
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1233
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 251
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6114
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2631
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1163
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2033
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 393
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1779
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 239
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 671
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 923
bin: 1.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6306
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4590
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 8.812902088657794e-5
allele num: 45388
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 2.007226013649137e-4
allele num: 4982
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7392
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 634
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.534706331045004e-5
allele num: 10488
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.17e1

MQRankSum
type: SiteQuality
SIO_000300: 1.94e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.12e-1

DP
type: SiteQuality
SIO_000300: 9.72741e5

ClippingRankSum
type: SiteQuality
SIO_000300: 3.58e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.900000000000001e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.157e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.692e1

GenotypeQuality
all individuals: 1852
bin: 9.75e1
variant carriers: 61

GenotypeQuality
all individuals: 5061
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 799
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 395
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 974
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13640
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 19502
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 533
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 796
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 921
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5523
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 267
bin: 8.75e1
variant carriers: 1

African
type: Population
allele count: 60
allele frequency: 9.21942224953903e-3
allele num: 6508
num of homozygotes: 0

Latino
type: Population
allele count: 4
allele frequency: 5.209690023443605e-4
allele num: 7678
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5186
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 46412
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4886
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 662
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10952
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.948e-1

DP
type: SiteQuality
SIO_000300: 1.009789e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.93e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.36e-1

FS
type: SiteQuality
SIO_000300: 7.11e-1

MQ
type: SiteQuality
SIO_000300: 5.739e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.83e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.1e-2

QD
type: SiteQuality
SIO_000300: 1.366e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.9e-3

GenotypeQuality
all individuals: 573
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5155
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 606
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2721
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2805
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 871
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 514
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4714
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 839
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 611
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 953
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 292
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 1.260504201680672e-4
allele num: 47600
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6678
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5428
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11228
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4984
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7944
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 670
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.921e0

MQ
type: SiteQuality
SIO_000300: 5.836e1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.39e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.7e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.5e0

DP
type: SiteQuality
SIO_000300: 1.03217e6

QD
type: SiteQuality
SIO_000300: 1.255e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.51e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -9.22e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.61e0

GenotypeQuality
all individuals: 4542
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 736
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 158
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 392
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 534
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2559
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1873
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 365
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 27198
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1363
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 366
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 602
bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5662
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 730
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.537515375153752e-4
allele num: 6504
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12756
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9472
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7574
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 52830
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.489e0

MQRankSum
type: SiteQuality
SIO_000300: 1.11e0

FS
type: SiteQuality
SIO_000300: 3.565e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.807e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.78e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.6e-3

MQ
type: SiteQuality
SIO_000300: 5.261e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.6e-2

QD
type: SiteQuality
SIO_000300: 5.55e0

DP
type: SiteQuality
SIO_000300: 1.209049e6

GenotypeQuality
all individuals: 127
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 544
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2083
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 432
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 29755
bin: 6.25e1
variant carriers: 3

GenotypeQuality
all individuals: 382
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 4779
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 507
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 849
bin: 8.25e1
variant carriers: 2

GenotypeQuality
all individuals: 1060
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 380
bin: 8.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1420
bin: 7.25e1
variant carriers: 1

Latino
type: Population
allele count: 165
allele frequency: 1.68264327962472e-2
allele num: 9806
num of homozygotes: 2

African
type: Population
allele count: 3
allele frequency: 3.823604384399694e-4
allele num: 7846
num of homozygotes: 0

South Asian
type: Population
allele count: 12
allele frequency: 9.115770282588879e-4
allele num: 13164
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 33
allele frequency: 5.687693898655636e-3
allele num: 5802
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 36
allele frequency: 6.640841173215274e-4
allele num: 54210
num of homozygotes: 0

East Asian
type: Population
allele count: 249
allele frequency: 3.616032529770549e-2
allele num: 6886
num of homozygotes: 2

Other
type: Population
allele count: 6
allele frequency: 7.957559681697613e-3
allele num: 754
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.99e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.71e-1

DP
type: SiteQuality
SIO_000300: 1.247321e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.44e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.12e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 4.75e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.3e-3

QD
type: SiteQuality
SIO_000300: 1.434e1

MQ
type: SiteQuality
SIO_000300: 5.996e1

GenotypeQuality
all individuals: 1482
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2205
bin: 9.75e1
variant carriers: 254

GenotypeQuality
all individuals: 1725
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 439
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 526
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4913
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 907
bin: 8.25e1
variant carriers: 2

GenotypeQuality
all individuals: 140
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 396
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 31763
bin: 6.25e1
variant carriers: 2

GenotypeQuality
all individuals: 412
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 452
bin: 5.25e1
variant carriers: 2

Latino
type: Population
allele count: 10
allele frequency: 9.889240506329115e-4
allele num: 10112
num of homozygotes: 0

African
type: Population
allele count: 249
allele frequency: 3.035104826913701e-2
allele num: 8204
num of homozygotes: 5

South Asian
type: Population
allele count: 1
allele frequency: 7.419498441905327e-5
allele num: 13478
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7152
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 8.996689218367641e-5
allele num: 55576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5922
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.288659793814433e-3
allele num: 776
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.53e-1

MQ
type: SiteQuality
SIO_000300: 5.82e1

VQSLOD
type: SiteQuality
SIO_000300: 1.38e0

DP
type: SiteQuality
SIO_000300: 1.287656e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.86e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.5e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.44e-1

QD
type: SiteQuality
SIO_000300: 1.534e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.49e-1

GenotypeQuality
all individuals: 1410
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 31763
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1796
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 465
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 10046
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 412
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2205
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 417
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1482
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 452
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4913
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7152
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.799337843673528e-5
allele num: 55576
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13478
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8204
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10112
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 776
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5922
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.287656e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.86e-2

MQRankSum
type: SiteQuality
SIO_000300: 3.53e-1

MQ
type: SiteQuality
SIO_000300: 5.82e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.5e0

QD
type: SiteQuality
SIO_000300: 1.534e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.44e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.49e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.38e0

GenotypeQuality
all individuals: 62
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 8413
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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bin: 4.75e1
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GenotypeQuality
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bin: 9.75e1
variant carriers: 8

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 446
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1534
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1372
bin: 3.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 796
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7466
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.17813383600377e-4
allele num: 8488
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6114
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.917913310318374e-4
allele num: 10428
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 5
allele frequency: 8.735150244584206e-5
allele num: 57240
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14034
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.45e0

MQRankSum
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 9.21e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.4e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.8e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -4.8e-2

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.322293e6

MQ
type: SiteQuality
SIO_000300: 5.922e1

QD
type: SiteQuality
SIO_000300: 1.395e1

GenotypeQuality
all individuals: 1639
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1063
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 258
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 464
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59026
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14572
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7846
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8834
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6212
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 828
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.337068160597572e-5
allele num: 10710
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.3e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.611e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 2.803e1

DP
type: SiteQuality
SIO_000300: 1.362845e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.085e0

MQRankSum
type: SiteQuality
SIO_000300: -1.656e0

MQ
type: SiteQuality
SIO_000300: 5.843e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.89e-1

GenotypeQuality
all individuals: 303
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1093
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 286
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variant carriers: 0

GenotypeQuality
all individuals: 1669
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7966
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.780580417683754e-5
allele num: 14748
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6298
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 834
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59750
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10808
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8956
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.309e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.716e1

MQRankSum
type: SiteQuality
SIO_000300: -2.01e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.276e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.1e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.154e0

DP
type: SiteQuality
SIO_000300: 1.375896e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.1e-1

QD
type: SiteQuality
SIO_000300: 9.32e0

GenotypeQuality
all individuals: 2082
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4170
bin: 2.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
all individuals: 177
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 600
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variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 1.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15294
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11062
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9270
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6422
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.21654501216545e-4
allele num: 8220
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61692
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.414327e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.01e-1

QD
type: SiteQuality
SIO_000300: 1.174e1

MQRankSum
type: SiteQuality
SIO_000300: 7.16e-1

FS
type: SiteQuality
SIO_000300: 2.293e0

MQ
type: SiteQuality
SIO_000300: 5.958e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.03e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.87e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.1e-1

GenotypeQuality
all individuals: 40124
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 557
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variant carriers: 0

GenotypeQuality
all individuals: 4170
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 539
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variant carriers: 0

GenotypeQuality
all individuals: 55
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variant carriers: 0

GenotypeQuality
all individuals: 516
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variant carriers: 0

GenotypeQuality
all individuals: 344
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variant carriers: 0

GenotypeQuality
all individuals: 34
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GenotypeQuality
all individuals: 177
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 181
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variant carriers: 0

GenotypeQuality
all individuals: 6019
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 175
bin: 5.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61692
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6422
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 856
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9270
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8220
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11062
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.53851183470642e-5
allele num: 15294
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.293e0

QD
type: SiteQuality
SIO_000300: 1.174e1

MQ
type: SiteQuality
SIO_000300: 5.958e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.87e0

DP
type: SiteQuality
SIO_000300: 1.414327e6

MQRankSum
type: SiteQuality
SIO_000300: 7.16e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.01e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.1e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.03e0

GenotypeQuality
all individuals: 23
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 111
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variant carriers: 0

GenotypeQuality
all individuals: 18
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variant carriers: 0

GenotypeQuality
all individuals: 195
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variant carriers: 0

GenotypeQuality
all individuals: 2093
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variant carriers: 3

GenotypeQuality
all individuals: 1845
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GenotypeQuality
all individuals: 117
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GenotypeQuality
all individuals: 6202
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 535
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GenotypeQuality
all individuals: 1843
bin: 7.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8324
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9454
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6466
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.778744146038421e-5
allele num: 62778
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11166
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15618
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.86e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -1.71e-2

QD
type: SiteQuality
SIO_000300: 1.39e1

MQRankSum
type: SiteQuality
SIO_000300: 1.33e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.211e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.27e-1

MQ
type: SiteQuality
SIO_000300: 5.916e1

FS
type: SiteQuality
SIO_000300: 1.251e0

DP
type: SiteQuality
SIO_000300: 1.432987e6

GenotypeQuality
all individuals: 17
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1852
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 41718
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 2094
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11198
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8362
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6472
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15686
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.586395075829685e-5
allele num: 63036
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9522
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ClippingRankSum
type: SiteQuality
SIO_000300: -1.121e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 7.08e-1

FS
type: SiteQuality
SIO_000300: 5.3e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.03e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.9e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.69e0

QD
type: SiteQuality
SIO_000300: 1.001e1

DP
type: SiteQuality
SIO_000300: 1.438113e6

GenotypeQuality
all individuals: 148
bin: 5.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 568
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variant carriers: 0

GenotypeQuality
all individuals: 2584
bin: 2.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.331518298087882e-5
allele num: 15794
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8416
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9598
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6500
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63572
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11266
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.891e0

MQ
type: SiteQuality
SIO_000300: 5.829e1

FS
type: SiteQuality
SIO_000300: 2.092e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.83e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.84e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 1.65e0

QD
type: SiteQuality
SIO_000300: 1.131e1

DP
type: SiteQuality
SIO_000300: 1.448107e6

BaseQRankSum
type: SiteQuality
SIO_000300: -2.775e0

GenotypeQuality
all individuals: 1947
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
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GenotypeQuality
all individuals: 1933
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 97
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GenotypeQuality
all individuals: 214
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GenotypeQuality
all individuals: 60
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 83
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GenotypeQuality
all individuals: 2143
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 6365
bin: 6.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64370
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6544
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9736
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 878
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11328
num of homozygotes: 0

East Asian
type: Population
allele count: 7
allele frequency: 8.252770572978071e-4
allele num: 8482
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16026
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.15e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.32e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.85e0

FS
type: SiteQuality
SIO_000300: 2.605e0

QD
type: SiteQuality
SIO_000300: 1.254e1

MQ
type: SiteQuality
SIO_000300: 5.92e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 3.02e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.23e0

DP
type: SiteQuality
SIO_000300: 1.462462e6

GenotypeQuality
all individuals: 1294
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1972
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 126
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 88
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 578
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 142
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2202
bin: 9.75e1
variant carriers: 19

GenotypeQuality
all individuals: 60
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 619
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1981
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1340
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6469
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11390
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 19
allele frequency: 2.915272961610458e-4
allele num: 65174
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6588
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8526
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16226
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.21e0

FS
type: SiteQuality
SIO_000300: 6.57e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.97e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

QD
type: SiteQuality
SIO_000300: 1.254e1

MQ
type: SiteQuality
SIO_000300: 5.915e1

MQRankSum
type: SiteQuality
SIO_000300: 2.7e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.08e-1

DP
type: SiteQuality
SIO_000300: 1.478758e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.04e-1

GenotypeQuality
all individuals: 1978
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 575
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 68
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1992
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2230
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 112
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 627
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1219
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 58
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43636
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1338
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 90
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6472
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8528
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.532003554248246e-5
allele num: 65274
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9928
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16252
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11402
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 6.840000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.81e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.28e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.1e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.84e-1

MQ
type: SiteQuality
SIO_000300: 5.939e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.480935e6

QD
type: SiteQuality
SIO_000300: 1.389e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.9e0

GenotypeQuality
all individuals: 58
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 627
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1992
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6472
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2230
bin: 9.75e1
variant carriers: 41

GenotypeQuality
all individuals: 1978
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 575
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1219
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 14
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1338
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 43636
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 72
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65274
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9928
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

East Asian
type: Population
allele count: 41
allele frequency: 4.807692307692308e-3
allele num: 8528
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11402
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16252
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6586
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.480935e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.1e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.81e-1

FS
type: SiteQuality
SIO_000300: 6.840000000000001e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.84e-1

QD
type: SiteQuality
SIO_000300: 1.389e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.9e0

MQ
type: SiteQuality
SIO_000300: 5.939e1

VQSLOD
type: SiteQuality
SIO_000300: 3.28e0

GenotypeQuality
all individuals: 32
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1371
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
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variant carriers: 0

GenotypeQuality
all individuals: 3
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variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2029
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2264
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2045
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6590
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 651
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 44288
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10114
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11472
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16406
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.51336299524804e-5
allele num: 66078
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8576
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 2.86e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.605e0

QD
type: SiteQuality
SIO_000300: 2.82e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.06e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.8e0

DP
type: SiteQuality
SIO_000300: 1.495632e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.28e0

MQ
type: SiteQuality
SIO_000300: 5.626e1

GenotypeQuality
all individuals: 608
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6606
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 538
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 18
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 38
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2053
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2266
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 44329
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 29
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 654
bin: 9.25e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.846396218983852e-5
allele num: 10156
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16416
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6606
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11486
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66144
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8584
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 7.191e0

QD
type: SiteQuality
SIO_000300: 1.49e1

MQ
type: SiteQuality
SIO_000300: 5.917e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.73e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.11e0

MQRankSum
type: SiteQuality
SIO_000300: 1.18e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.68e0

VQSLOD
type: SiteQuality
SIO_000300: 3.97e-1

DP
type: SiteQuality
SIO_000300: 1.497365e6

GenotypeQuality
all individuals: 6609
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 520
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 39
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1372
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2268
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 606
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2032
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2055
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 653
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 36
bin: 3.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16416
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.511121856866538e-5
allele num: 66176
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11490
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8584
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10156
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 3.04e-1

FS
type: SiteQuality
SIO_000300: 3.628e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -3.855e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.549e0

QD
type: SiteQuality
SIO_000300: 1.477e1

DP
type: SiteQuality
SIO_000300: 1.497793e6

VQSLOD
type: SiteQuality
SIO_000300: 1.13e0

MQ
type: SiteQuality
SIO_000300: 5.911e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.129999999999999e-1