5-433114-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 433114
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 433114
    reference: chr 5
allele count: 11
allele frequency: 1.453834157172689e-4
allele num: 75662
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000323816
  ensembl transcript: ENST00000316418
  gene symbol: AHRR
  hgvsc: ENST00000316418.5:c.1178+52G>A
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000063438
  ensembl transcript: ENST00000507048
  gene symbol: AHRR
  hgvsc: ENST00000507048.1:n.923+52G>A
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426076
  ensembl transcript: ENST00000511487
  gene symbol: AHRR
  hgvsc: ENST00000511487.1:c.90-854G>A
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426932
  ensembl transcript: ENST00000506456
  gene symbol: AHRR
  hgvsc: ENST00000506456.1:c.692+52G>A
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424601
  ensembl transcript: ENST00000505113
  gene symbol: AHRR
  hgvsc: ENST00000505113.1:c.1124+52G>A
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424880
  ensembl transcript: ENST00000512529
  gene symbol: AHRR
  hgvsc: ENST00000512529.1:c.662+52G>A
  variant of: http://identifiers.org/hgnc/346
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11447
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 16455
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4558
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4462
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1353
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 235
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 149
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20480
  bin: 1.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 484
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 31
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2800
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 606
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 4445
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6201
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 548
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5873
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8356
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 14166
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1151
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1676
  bin: 6.25e1
  variant carriers: 1
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: South Asian
reference allele: G
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum

5-433921-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 433921
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 433921
    reference: chr 5
allele count: 1
allele frequency: 1.246478697679057e-5
allele num: 80226
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424601
  ensembl transcript: ENST00000505113
  gene symbol: AHRR
  hgvsc: ENST00000505113.1:c.1125-47C>G
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000063438
  ensembl transcript: ENST00000507048
  gene symbol: AHRR
  hgvsc: ENST00000507048.1:n.924-47C>G
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426932
  ensembl transcript: ENST00000506456
  gene symbol: AHRR
  hgvsc: ENST00000506456.1:c.693-47C>G
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426076
  ensembl transcript: ENST00000511487
  gene symbol: AHRR
  hgvsc: ENST00000511487.1:c.90-47C>G
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000323816
  ensembl transcript: ENST00000316418
  gene symbol: AHRR
  hgvsc: ENST00000316418.5:c.1179-47C>G
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424880
  ensembl transcript: ENST00000512529
  gene symbol: AHRR
  hgvsc: ENST00000512529.1:c.663-47C>G
  variant of: http://identifiers.org/hgnc/346
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10745
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5924
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1902
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19513
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12697
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4593
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 322
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 649
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2293
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1131
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10819
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3116
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5112
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2057
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7060
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5186
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2947
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1254
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 406
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1329
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
reference allele: C
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD

5-433924-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 433924
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 433924
    reference: chr 5
allele count: 3
allele frequency: 3.722823389258414e-5
allele num: 80584
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426932
  ensembl transcript: ENST00000506456
  gene symbol: AHRR
  hgvsc: ENST00000506456.1:c.693-44G>C
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426076
  ensembl transcript: ENST00000511487
  gene symbol: AHRR
  hgvsc: ENST00000511487.1:c.90-44G>C
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424601
  ensembl transcript: ENST00000505113
  gene symbol: AHRR
  hgvsc: ENST00000505113.1:c.1125-44G>C
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000063438
  ensembl transcript: ENST00000507048
  gene symbol: AHRR
  hgvsc: ENST00000507048.1:n.924-44G>C
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000323816
  ensembl transcript: ENST00000316418
  gene symbol: AHRR
  hgvsc: ENST00000316418.5:c.1179-44G>C
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424880
  ensembl transcript: ENST00000512529
  gene symbol: AHRR
  hgvsc: ENST00000512529.1:c.663-44G>C
  variant of: http://identifiers.org/hgnc/346
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2005
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12666
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9579
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19423
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7184
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 320
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4509
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1588
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1531
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 11619
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3187
  bin: 7.5e0
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genotype quality: GenotypeQuality
  all individuals: 6958
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 214
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  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 6.25e1
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genotype quality: GenotypeQuality
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  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3596
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8202
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: ClippingRankSum

5-433936-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 433936
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 433936
    reference: chr 5
allele count: 1
allele frequency: 1.219095918466865e-5
allele num: 82028
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426932
  ensembl transcript: ENST00000506456
  gene symbol: AHRR
  hgvsc: ENST00000506456.1:c.693-32G>C
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424601
  ensembl transcript: ENST00000505113
  gene symbol: AHRR
  hgvsc: ENST00000505113.1:c.1125-32G>C
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426076
  ensembl transcript: ENST00000511487
  gene symbol: AHRR
  hgvsc: ENST00000511487.1:c.90-32G>C
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000323816
  ensembl transcript: ENST00000316418
  gene symbol: AHRR
  hgvsc: ENST00000316418.5:c.1179-32G>C
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424880
  ensembl transcript: ENST00000512529
  gene symbol: AHRR
  hgvsc: ENST00000512529.1:c.663-32G>C
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000063438
  ensembl transcript: ENST00000507048
  gene symbol: AHRR
  hgvsc: ENST00000507048.1:n.924-32G>C
  variant of: http://identifiers.org/hgnc/346
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 168
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5269
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17245
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13735
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 745
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2580
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12531
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3957
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 759
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1777
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12878
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7442
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12636
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 468
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 675
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 461
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 746
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 118
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3206
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 256
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1552
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
population: African
population: Latino
population: South Asian
reference allele: G
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum

5-433940-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 433940
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 433940
    reference: chr 5
allele count: 1
allele frequency: 1.207175450880031e-5
allele num: 82838
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424880
  ensembl transcript: ENST00000512529
  gene symbol: AHRR
  hgvsc: ENST00000512529.1:c.663-28T>G
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426932
  ensembl transcript: ENST00000506456
  gene symbol: AHRR
  hgvsc: ENST00000506456.1:c.693-28T>G
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000323816
  ensembl transcript: ENST00000316418
  gene symbol: AHRR
  hgvsc: ENST00000316418.5:c.1179-28T>G
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426076
  ensembl transcript: ENST00000511487
  gene symbol: AHRR
  hgvsc: ENST00000511487.1:c.90-28T>G
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424601
  ensembl transcript: ENST00000505113
  gene symbol: AHRR
  hgvsc: ENST00000505113.1:c.1125-28T>G
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000063438
  ensembl transcript: ENST00000507048
  gene symbol: AHRR
  hgvsc: ENST00000507048.1:n.924-28T>G
  variant of: http://identifiers.org/hgnc/346
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2834
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3843
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4412
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15958
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 797
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12348
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15930
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1537
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 605
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12597
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15087
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 543
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1464
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 727
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3243
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 509
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4748
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 490
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1703
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: DP
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: MQ

5-433945-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 433945
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 433945
    reference: chr 5
allele count: 3
allele frequency: 3.573640825272788e-5
allele num: 83948
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424601
  ensembl transcript: ENST00000505113
  gene symbol: AHRR
  hgvsc: ENST00000505113.1:c.1125-23T>C
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426076
  ensembl transcript: ENST00000511487
  gene symbol: AHRR
  hgvsc: ENST00000511487.1:c.90-23T>C
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426932
  ensembl transcript: ENST00000506456
  gene symbol: AHRR
  hgvsc: ENST00000506456.1:c.693-23T>C
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424880
  ensembl transcript: ENST00000512529
  gene symbol: AHRR
  hgvsc: ENST00000512529.1:c.663-23T>C
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000323816
  ensembl transcript: ENST00000316418
  gene symbol: AHRR
  hgvsc: ENST00000316418.5:c.1179-23T>C
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000063438
  ensembl transcript: ENST00000507048
  gene symbol: AHRR
  hgvsc: ENST00000507048.1:n.924-23T>C
  variant of: http://identifiers.org/hgnc/346
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3563
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3756
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3235
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18810
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12030
  bin: 7.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 862
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13973
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 590
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1135
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 453
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 419
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3312
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 464
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4287
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 481
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17933
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1122
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1542
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 1908
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 12332
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
population: Latino
reference allele: T
site quality: ClippingRankSum
site quality: QD
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff

5-433946-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 433946
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 433946
    reference: chr 5
allele count: 0
allele frequency: 0.0e0
allele num: 84080
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000323816
  ensembl transcript: ENST00000316418
  gene symbol: AHRR
  hgvsc: ENST00000316418.5:c.1179-22G>A
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426076
  ensembl transcript: ENST00000511487
  gene symbol: AHRR
  hgvsc: ENST00000511487.1:c.90-22G>A
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424880
  ensembl transcript: ENST00000512529
  gene symbol: AHRR
  hgvsc: ENST00000512529.1:c.663-22G>A
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424601
  ensembl transcript: ENST00000505113
  gene symbol: AHRR
  hgvsc: ENST00000505113.1:c.1125-22G>A
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426932
  ensembl transcript: ENST00000506456
  gene symbol: AHRR
  hgvsc: ENST00000506456.1:c.693-22G>A
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000063438
  ensembl transcript: ENST00000507048
  gene symbol: AHRR
  hgvsc: ENST00000507048.1:n.924-22G>A
  variant of: http://identifiers.org/hgnc/346
canonical: true
consequence: intron
filter: AC_Adj0_Filter
genotype depth: GenotypeDepth
  all individuals: 3426
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19453
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11909
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13486
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3349
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 894
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3727
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 743
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4193
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 476
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 412
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1070
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12248
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 592
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1539
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18575
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3350
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 170
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 593
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: G
site quality: ClippingRankSum
site quality: DP
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum

5-433948-GCC-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 433948
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 433946
    reference: chr 5
allele count: 1
allele frequency: 1.178522604063546e-5
allele num: 84852
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000063438
  ensembl transcript: ENST00000507048
  gene symbol: AHRR
  hgvsc: ENST00000507048.1:n.924-17_924-16delCC
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426076
  ensembl transcript: ENST00000511487
  gene symbol: AHRR
  hgvsc: ENST00000511487.1:c.90-17_90-16delCC
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424880
  ensembl transcript: ENST00000512529
  gene symbol: AHRR
  hgvsc: ENST00000512529.1:c.663-17_663-16delCC
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424601
  ensembl transcript: ENST00000505113
  gene symbol: AHRR
  hgvsc: ENST00000505113.1:c.1125-17_1125-16delCC
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426932
  ensembl transcript: ENST00000506456
  gene symbol: AHRR
  hgvsc: ENST00000506456.1:c.693-17_693-16delCC
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000323816
  ensembl transcript: ENST00000316418
  gene symbol: AHRR
  hgvsc: ENST00000316418.5:c.1179-17_1179-16delCC
  variant of: http://identifiers.org/hgnc/346
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3628
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 941
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20431
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 96
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3695
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 72
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3277
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11625
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12675
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 55
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 80
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 94
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 112
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 383
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3392
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 453
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 595
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 434
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 998
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1544
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 19246
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 352
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3356
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 640
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
population: East Asian
population: Other
reference allele: GCC
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: DP

5-433952-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 433952
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 433952
    reference: chr 5
allele count: 40443
allele frequency: 4.149617286737395e-1
allele num: 97462
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424601
  ensembl transcript: ENST00000505113
  gene symbol: AHRR
  hgvsc: ENST00000505113.1:c.1125-16C>T
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426076
  ensembl transcript: ENST00000511487
  gene symbol: AHRR
  hgvsc: ENST00000511487.1:c.90-16C>T
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000323816
  ensembl transcript: ENST00000316418
  gene symbol: AHRR
  hgvsc: ENST00000316418.5:c.1179-16C>T
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426932
  ensembl transcript: ENST00000506456
  gene symbol: AHRR
  hgvsc: ENST00000506456.1:c.693-16C>T
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424880
  ensembl transcript: ENST00000512529
  gene symbol: AHRR
  hgvsc: ENST00000512529.1:c.663-16C>T
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000063438
  ensembl transcript: ENST00000507048
  gene symbol: AHRR
  hgvsc: ENST00000507048.1:n.924-16C>T
  variant of: http://identifiers.org/hgnc/346
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10285
  bin: 1.75e1
  variant carriers: 8967
genotype depth: GenotypeDepth
  all individuals: 2827
  bin: 3.25e1
  variant carriers: 2206
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 5.25e1
  variant carriers: 219
genotype depth: GenotypeDepth
  all individuals: 2405
  bin: 2.5e0
  variant carriers: 460
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.25e1
  variant carriers: 151
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 8.25e1
  variant carriers: 93
genotype depth: GenotypeDepth
  all individuals: 154
  bin: 7.25e1
  variant carriers: 148
genotype depth: GenotypeDepth
  all individuals: 4738
  bin: 7.5e0
  variant carriers: 1862
genotype depth: GenotypeDepth
  all individuals: 369
  bin: 4.75e1
  variant carriers: 336
genotype depth: GenotypeDepth
  all individuals: 170
  bin: 5.75e1
  variant carriers: 161
genotype depth: GenotypeDepth
  all individuals: 7085
  bin: 2.75e1
  variant carriers: 4652
genotype depth: GenotypeDepth
  all individuals: 1131
  bin: 3.75e1
  variant carriers: 1002
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 4.25e1
  variant carriers: 501
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 6.75e1
  variant carriers: 134
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 7.75e1
  variant carriers: 107
genotype depth: GenotypeDepth
  all individuals: 9336
  bin: 1.25e1
  variant carriers: 5868
genotype depth: GenotypeDepth
  all individuals: 48
  bin: 9.25e1
  variant carriers: 48
genotype depth: GenotypeDepth
  all individuals: 17055
  bin: 2.25e1
  variant carriers: 7733
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 9.75e1
  variant carriers: 376
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 8.75e1
  variant carriers: 64
genotype quality: GenotypeQuality
  all individuals: 971
  bin: 4.25e1
  variant carriers: 579
genotype quality: GenotypeQuality
  all individuals: 493
  bin: 1.25e1
  variant carriers: 329
genotype quality: GenotypeQuality
  all individuals: 1554
  bin: 2.75e1
  variant carriers: 442
genotype quality: GenotypeQuality
  all individuals: 972
  bin: 5.75e1
  variant carriers: 588
genotype quality: GenotypeQuality
  all individuals: 1573
  bin: 5.25e1
  variant carriers: 1083
genotype quality: GenotypeQuality
  all individuals: 454
  bin: 9.25e1
  variant carriers: 416
genotype quality: GenotypeQuality
  all individuals: 1835
  bin: 7.5e0
  variant carriers: 423
genotype quality: GenotypeQuality
  all individuals: 23876
  bin: 9.75e1
  variant carriers: 23756
genotype quality: GenotypeQuality
  all individuals: 1926
  bin: 3.75e1
  variant carriers: 1036
genotype quality: GenotypeQuality
  all individuals: 605
  bin: 8.25e1
  variant carriers: 521
genotype quality: GenotypeQuality
  all individuals: 450
  bin: 8.75e1
  variant carriers: 402
genotype quality: GenotypeQuality
  all individuals: 1797
  bin: 2.5e0
  variant carriers: 166
genotype quality: GenotypeQuality
  all individuals: 597
  bin: 1.75e1
  variant carriers: 424
num of homozygotes: 8284
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: African
population: South Asian
population: Other
population: East Asian
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum

5-433953-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 433953
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 433953
    reference: chr 5
allele count: 221
allele frequency: 2.22092696064638e-3
allele num: 99508
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424601
  ensembl transcript: ENST00000505113
  gene symbol: AHRR
  hgvsc: ENST00000505113.1:c.1125-15G>A
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000323816
  ensembl transcript: ENST00000316418
  gene symbol: AHRR
  hgvsc: ENST00000316418.5:c.1179-15G>A
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000063438
  ensembl transcript: ENST00000507048
  gene symbol: AHRR
  hgvsc: ENST00000507048.1:n.924-15G>A
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424880
  ensembl transcript: ENST00000512529
  gene symbol: AHRR
  hgvsc: ENST00000512529.1:c.663-15G>A
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426076
  ensembl transcript: ENST00000511487
  gene symbol: AHRR
  hgvsc: ENST00000511487.1:c.90-15G>A
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426932
  ensembl transcript: ENST00000506456
  gene symbol: AHRR
  hgvsc: ENST00000506456.1:c.693-15G>A
  variant of: http://identifiers.org/hgnc/346
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3370
  bin: 2.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 4.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9249
  bin: 1.25e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 3.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 4782
  bin: 7.5e0
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 9602
  bin: 1.75e1
  variant carriers: 45
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9004
  bin: 2.75e1
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2397
  bin: 3.25e1
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18577
  bin: 2.25e1
  variant carriers: 42
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 5.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 20615
  bin: 6.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3920
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 670
  bin: 9.75e1
  variant carriers: 205
genotype quality: GenotypeQuality
  all individuals: 682
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 330
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1121
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3051
  bin: 7.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3164
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2642
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5801
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 482
  bin: 8.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3808
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 7
population: Latino
population: European (Finnish)
population: East Asian
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

5-433953-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 433953
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 433953
    reference: chr 5
allele count: 2
allele frequency: 2.00988865216867e-5
allele num: 99508
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000063438
  ensembl transcript: ENST00000507048
  gene symbol: AHRR
  hgvsc: ENST00000507048.1:n.924-15G>C
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426076
  ensembl transcript: ENST00000511487
  gene symbol: AHRR
  hgvsc: ENST00000511487.1:c.90-15G>C
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000323816
  ensembl transcript: ENST00000316418
  gene symbol: AHRR
  hgvsc: ENST00000316418.5:c.1179-15G>C
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426932
  ensembl transcript: ENST00000506456
  gene symbol: AHRR
  hgvsc: ENST00000506456.1:c.693-15G>C
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424601
  ensembl transcript: ENST00000505113
  gene symbol: AHRR
  hgvsc: ENST00000505113.1:c.1125-15G>C
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424880
  ensembl transcript: ENST00000512529
  gene symbol: AHRR
  hgvsc: ENST00000512529.1:c.663-15G>C
  variant of: http://identifiers.org/hgnc/346
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3370
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9602
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18577
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4782
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9249
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2397
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9004
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2642
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 682
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5801
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 976
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3051
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1301
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 397
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 330
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20615
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3164
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3671
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1121
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
reference allele: G
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum

5-433955-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 433955
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 433955
    reference: chr 5
allele count: 2
allele frequency: 2.004650789832411e-5
allele num: 99768
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426076
  ensembl transcript: ENST00000511487
  gene symbol: AHRR
  hgvsc: ENST00000511487.1:c.90-13C>G
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424601
  ensembl transcript: ENST00000505113
  gene symbol: AHRR
  hgvsc: ENST00000505113.1:c.1125-13C>G
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000323816
  ensembl transcript: ENST00000316418
  gene symbol: AHRR
  hgvsc: ENST00000316418.5:c.1179-13C>G
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000063438
  ensembl transcript: ENST00000507048
  gene symbol: AHRR
  hgvsc: ENST00000507048.1:n.924-13C>G
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424880
  ensembl transcript: ENST00000512529
  gene symbol: AHRR
  hgvsc: ENST00000512529.1:c.663-13C>G
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426932
  ensembl transcript: ENST00000506456
  gene symbol: AHRR
  hgvsc: ENST00000506456.1:c.693-13C>G
  variant of: http://identifiers.org/hgnc/346
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4695
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 240
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9292
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2405
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19114
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9027
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3464
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9142
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 644
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 465
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 3057
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3854
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1106
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 354
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3840
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 390
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5744
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1766
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3119
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3395
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
reference allele: C
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum

5-433960-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 433960
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 433960
    reference: chr 5
allele count: 1
allele frequency: 9.990209594597294e-6
allele num: 100098
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000063438
  ensembl transcript: ENST00000507048
  gene symbol: AHRR
  hgvsc: ENST00000507048.1:n.924-8C>T
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000323816
  ensembl transcript: ENST00000316418
  gene symbol: AHRR
  hgvsc: ENST00000316418.5:c.1179-8C>T
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426932
  ensembl transcript: ENST00000506456
  gene symbol: AHRR
  hgvsc: ENST00000506456.1:c.693-8C>T
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424880
  ensembl transcript: ENST00000512529
  gene symbol: AHRR
  hgvsc: ENST00000512529.1:c.663-8C>T
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426076
  ensembl transcript: ENST00000511487
  gene symbol: AHRR
  hgvsc: ENST00000511487.1:c.90-8C>T
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424601
  ensembl transcript: ENST00000505113
  gene symbol: AHRR
  hgvsc: ENST00000505113.1:c.1125-8C>T
  variant of: http://identifiers.org/hgnc/346
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 594
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7954
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4537
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20864
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2419
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8584
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9342
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3666
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 449
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3339
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1716
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 380
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 462
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 24065
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 697
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 343
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3488
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5711
  bin: 2.25e1
  variant carriers: 0
hgvs: c.1179-8C>T
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: South Asian
reference allele: C
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: ClippingRankSum

5-433961-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 433961
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 433961
    reference: chr 5
allele count: 3
allele frequency: 2.987809736275994e-5
allele num: 100408
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426932
  ensembl transcript: ENST00000506456
  gene symbol: AHRR
  hgvsc: ENST00000506456.1:c.693-7T>C
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426076
  ensembl transcript: ENST00000511487
  gene symbol: AHRR
  hgvsc: ENST00000511487.1:c.90-7T>C
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424880
  ensembl transcript: ENST00000512529
  gene symbol: AHRR
  hgvsc: ENST00000512529.1:c.663-7T>C
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424601
  ensembl transcript: ENST00000505113
  gene symbol: AHRR
  hgvsc: ENST00000505113.1:c.1125-7T>C
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000063438
  ensembl transcript: ENST00000507048
  gene symbol: AHRR
  hgvsc: ENST00000507048.1:n.924-7T>C
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000323816
  ensembl transcript: ENST00000316418
  gene symbol: AHRR
  hgvsc: ENST00000316418.5:c.1179-7T>C
  variant of: http://identifiers.org/hgnc/346
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3698
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9409
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21217
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8512
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4510
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2405
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 593
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7663
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5737
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2856
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 342
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 414
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 567
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 940
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1144
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3366
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1687
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2476
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3452
  bin: 3.75e1
  variant carriers: 0
hgvs: c.1179-7T>C
num of homozygotes: 0
population: Other
population: African
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: DP

5-433962-CT-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 433962
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 433961
    reference: chr 5
allele count: 1
allele frequency: 9.961349962146871e-6
allele num: 100388
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000063438
  ensembl transcript: ENST00000507048
  gene symbol: AHRR
  hgvsc: ENST00000507048.1:n.924-5delT
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424880
  ensembl transcript: ENST00000512529
  gene symbol: AHRR
  hgvsc: ENST00000512529.1:c.663-5delT
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426076
  ensembl transcript: ENST00000511487
  gene symbol: AHRR
  hgvsc: ENST00000511487.1:c.90-5delT
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000323816
  ensembl transcript: ENST00000316418
  gene symbol: AHRR
  hgvsc: ENST00000316418.5:c.1179-5delT
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424601
  ensembl transcript: ENST00000505113
  gene symbol: AHRR
  hgvsc: ENST00000505113.1:c.1125-5delT
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426932
  ensembl transcript: ENST00000506456
  gene symbol: AHRR
  hgvsc: ENST00000506456.1:c.693-5delT
  variant of: http://identifiers.org/hgnc/346
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7295
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2431
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8402
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4471
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21638
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3720
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9501
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5748
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2679
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1135
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 343
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1652
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 380
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 327
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3418
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1531
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25291
  bin: 6.25e1
  variant carriers: 0
hgvs: c.1179-5delT
num of homozygotes: 0
population: Latino
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: CT
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum

5-433968-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 433968
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 433968
    reference: chr 5
allele count: 2
allele frequency: 1.981178801386825e-5
allele num: 100950
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426932
  ensembl transcript: ENST00000506456
  gene symbol: AHRR
  hgvsc: ENST00000506456.1:c.693G>A
  hgvsp: ENST00000506456.1:c.693G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000323816
  ensembl transcript: ENST00000316418
  gene symbol: AHRR
  hgvsc: ENST00000316418.5:c.1179G>A
  hgvsp: ENST00000316418.5:c.1179G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000063438
  ensembl transcript: ENST00000507048
  gene symbol: AHRR
  hgvsc: ENST00000507048.1:n.924G>A
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426076
  ensembl transcript: ENST00000511487
  gene symbol: AHRR
  hgvsc: ENST00000511487.1:c.90G>A
  hgvsp: ENST00000511487.1:c.90G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424601
  ensembl transcript: ENST00000505113
  gene symbol: AHRR
  hgvsc: ENST00000505113.1:c.1125G>A
  hgvsp: ENST00000505113.1:c.1125G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424880
  ensembl transcript: ENST00000512529
  gene symbol: AHRR
  hgvsc: ENST00000512529.1:c.663G>A
  hgvsp: ENST00000512529.1:c.663G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/346
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7797
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5895
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4268
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2547
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 605
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10172
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3895
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23119
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3569
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 343
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1433
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4103
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 455
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 715
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 312
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 329
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3130
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 887
  bin: 7.75e1
  variant carriers: 0
hgvs: c.1179G>A
num of homozygotes: 0
population: Latino
population: Other
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: QD

5-433972-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 433972
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 433972
    reference: chr 5
allele count: 3
allele frequency: 2.959513850524821e-5
allele num: 101368
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426932
  ensembl transcript: ENST00000506456
  gene symbol: AHRR
  hgvsc: ENST00000506456.1:c.697A>G
  hgvsp: ENSP00000426932.1:p.Arg233Gly
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426076
  ensembl transcript: ENST00000511487
  gene symbol: AHRR
  hgvsc: ENST00000511487.1:c.94A>G
  hgvsp: ENSP00000426076.1:p.Arg32Gly
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424601
  ensembl transcript: ENST00000505113
  gene symbol: AHRR
  hgvsc: ENST00000505113.1:c.1129A>G
  hgvsp: ENSP00000424601.1:p.Arg377Gly
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000323816
  ensembl transcript: ENST00000316418
  gene symbol: AHRR
  hgvsc: ENST00000316418.5:c.1183A>G
  hgvsp: ENSP00000323816.5:p.Arg395Gly
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000063438
  ensembl transcript: ENST00000507048
  gene symbol: AHRR
  hgvsc: ENST00000507048.1:n.928A>G
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424880
  ensembl transcript: ENST00000512529
  gene symbol: AHRR
  hgvsc: ENST00000512529.1:c.667A>G
  hgvsp: ENSP00000424880.1:p.Arg223Gly
  variant of: http://identifiers.org/hgnc/346
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3939
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2630
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10636
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7290
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4141
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24358
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4821
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3666
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 324
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1097
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1169
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 269
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3142
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 322
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2176
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5405
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Arg395Gly
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: DP

5-433998-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 433998
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 433998
    reference: chr 5
allele count: 2
allele frequency: 1.933413247747573e-5
allele num: 103444
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424601
  ensembl transcript: ENST00000505113
  gene symbol: AHRR
  hgvsc: ENST00000505113.1:c.1155G>A
  hgvsp: ENST00000505113.1:c.1155G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424880
  ensembl transcript: ENST00000512529
  gene symbol: AHRR
  hgvsc: ENST00000512529.1:c.693G>A
  hgvsp: ENST00000512529.1:c.693G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426932
  ensembl transcript: ENST00000506456
  gene symbol: AHRR
  hgvsc: ENST00000506456.1:c.723G>A
  hgvsp: ENST00000506456.1:c.723G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000063438
  ensembl transcript: ENST00000507048
  gene symbol: AHRR
  hgvsc: ENST00000507048.1:n.954G>A
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000323816
  ensembl transcript: ENST00000316418
  gene symbol: AHRR
  hgvsc: ENST00000316418.5:c.1209G>A
  hgvsp: ENST00000316418.5:c.1209G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426076
  ensembl transcript: ENST00000511487
  gene symbol: AHRR
  hgvsc: ENST00000511487.1:c.120G>A
  hgvsp: ENST00000511487.1:c.120G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/346
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13068
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3502
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 620
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3205
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4170
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4601
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2916
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26881
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 450
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1004
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3908
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4590
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 962
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 299
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 682
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33789
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Leu403Leu
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: Other
population: Latino
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: MQ
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD

5-434001-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 434001
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 434001
    reference: chr 5
allele count: 1
allele frequency: 9.652509652509653e-6
allele num: 103600
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000323816
  ensembl transcript: ENST00000316418
  gene symbol: AHRR
  hgvsc: ENST00000316418.5:c.1212C>G
  hgvsp: ENSP00000323816.5:p.Ser404Arg
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000063438
  ensembl transcript: ENST00000507048
  gene symbol: AHRR
  hgvsc: ENST00000507048.1:n.957C>G
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426932
  ensembl transcript: ENST00000506456
  gene symbol: AHRR
  hgvsc: ENST00000506456.1:c.726C>G
  hgvsp: ENSP00000426932.1:p.Ser242Arg
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424880
  ensembl transcript: ENST00000512529
  gene symbol: AHRR
  hgvsc: ENST00000512529.1:c.696C>G
  hgvsp: ENSP00000424880.1:p.Ser232Arg
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426076
  ensembl transcript: ENST00000511487
  gene symbol: AHRR
  hgvsc: ENST00000511487.1:c.123C>G
  hgvsp: ENSP00000426076.1:p.Ser41Arg
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424601
  ensembl transcript: ENST00000505113
  gene symbol: AHRR
  hgvsc: ENST00000505113.1:c.1158C>G
  hgvsp: ENSP00000424601.1:p.Ser386Arg
  variant of: http://identifiers.org/hgnc/346
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4178
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26964
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 627
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3429
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4347
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13308
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3001
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3140
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4456
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1465
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 660
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33922
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1027
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1592
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1018
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1904
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3883
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ser404Arg
num of homozygotes: 0
population: East Asian
population: Latino
population: South Asian
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: FS
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: DP

5-434003-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 434003
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 434003
    reference: chr 5
allele count: 1
allele frequency: 9.63613937711995e-6
allele num: 103776
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000063438
  ensembl transcript: ENST00000507048
  gene symbol: AHRR
  hgvsc: ENST00000507048.1:n.959G>A
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426932
  ensembl transcript: ENST00000506456
  gene symbol: AHRR
  hgvsc: ENST00000506456.1:c.728G>A
  hgvsp: ENSP00000426932.1:p.Arg243Lys
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000323816
  ensembl transcript: ENST00000316418
  gene symbol: AHRR
  hgvsc: ENST00000316418.5:c.1214G>A
  hgvsp: ENSP00000323816.5:p.Arg405Lys
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424601
  ensembl transcript: ENST00000505113
  gene symbol: AHRR
  hgvsc: ENST00000505113.1:c.1160G>A
  hgvsp: ENSP00000424601.1:p.Arg387Lys
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426076
  ensembl transcript: ENST00000511487
  gene symbol: AHRR
  hgvsc: ENST00000511487.1:c.125G>A
  hgvsp: ENSP00000426076.1:p.Arg42Lys
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424880
  ensembl transcript: ENST00000512529
  gene symbol: AHRR
  hgvsc: ENST00000512529.1:c.698G>A
  hgvsp: ENSP00000424880.1:p.Arg233Lys
  variant of: http://identifiers.org/hgnc/346
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27058
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3026
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3056
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13535
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4160
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4184
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3374
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 242
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 626
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1380
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 314
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4772
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3905
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 999
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 991
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1021
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1532
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4370
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 235
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Arg405Lys
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: East Asian
reference allele: G
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD

5-434021-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 434021
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 434021
    reference: chr 5
allele count: 1
allele frequency: 9.512756606609463e-6
allele num: 105122
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426076
  ensembl transcript: ENST00000511487
  gene symbol: AHRR
  hgvsc: ENST00000511487.1:c.143G>A
  hgvsp: ENSP00000426076.1:p.Gly48Glu
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000063438
  ensembl transcript: ENST00000507048
  gene symbol: AHRR
  hgvsc: ENST00000507048.1:n.977G>A
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424601
  ensembl transcript: ENST00000505113
  gene symbol: AHRR
  hgvsc: ENST00000505113.1:c.1178G>A
  hgvsp: ENSP00000424601.1:p.Gly393Glu
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424880
  ensembl transcript: ENST00000512529
  gene symbol: AHRR
  hgvsc: ENST00000512529.1:c.716G>A
  hgvsp: ENSP00000424880.1:p.Gly239Glu
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426932
  ensembl transcript: ENST00000506456
  gene symbol: AHRR
  hgvsc: ENST00000506456.1:c.746G>A
  hgvsp: ENSP00000426932.1:p.Gly249Glu
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000323816
  ensembl transcript: ENST00000316418
  gene symbol: AHRR
  hgvsc: ENST00000316418.5:c.1232G>A
  hgvsp: ENSP00000323816.5:p.Gly411Glu
  variant of: http://identifiers.org/hgnc/346
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 644
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2926
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4129
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2910
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15402
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27452
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3328
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2323
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 298
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 509
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 838
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 223
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 154
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 958
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1167
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 419
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1390
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5176
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3756
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Gly411Glu
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: European (Non-Finnish)
population: African
population: South Asian
population: East Asian
reference allele: G
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: ReadPosRankSum

5-434024-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 434024
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 434024
    reference: chr 5
allele count: 19
allele frequency: 1.802485532681909e-4
allele num: 105410
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426076
  ensembl transcript: ENST00000511487
  gene symbol: AHRR
  hgvsc: ENST00000511487.1:c.146G>A
  hgvsp: ENSP00000426076.1:p.Arg49Gln
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426932
  ensembl transcript: ENST00000506456
  gene symbol: AHRR
  hgvsc: ENST00000506456.1:c.749G>A
  hgvsp: ENSP00000426932.1:p.Arg250Gln
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000323816
  ensembl transcript: ENST00000316418
  gene symbol: AHRR
  hgvsc: ENST00000316418.5:c.1235G>A
  hgvsp: ENSP00000323816.5:p.Arg412Gln
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000063438
  ensembl transcript: ENST00000507048
  gene symbol: AHRR
  hgvsc: ENST00000507048.1:n.980G>A
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424880
  ensembl transcript: ENST00000512529
  gene symbol: AHRR
  hgvsc: ENST00000512529.1:c.719G>A
  hgvsp: ENSP00000424880.1:p.Arg240Gln
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424601
  ensembl transcript: ENST00000505113
  gene symbol: AHRR
  hgvsc: ENST00000505113.1:c.1181G>A
  hgvsp: ENSP00000424601.1:p.Arg394Gln
  variant of: http://identifiers.org/hgnc/346
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2689
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27580
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2002
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4121
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2810
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 663
  bin: 3.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3471
  bin: 3.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15823
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 919
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3480
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3819
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 677
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1140
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 364
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37441
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 467
  bin: 9.75e1
  variant carriers: 19
genotype quality: GenotypeQuality
  all individuals: 506
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1410
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Arg412Gln
num of homozygotes: 0
population: East Asian
population: Other
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD

5-434027-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 434027
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 434027
    reference: chr 5
allele count: 1
allele frequency: 9.464677822366926e-6
allele num: 105656
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000063438
  ensembl transcript: ENST00000507048
  gene symbol: AHRR
  hgvsc: ENST00000507048.1:n.983G>A
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424880
  ensembl transcript: ENST00000512529
  gene symbol: AHRR
  hgvsc: ENST00000512529.1:c.722G>A
  hgvsp: ENSP00000424880.1:p.Arg241Lys
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000323816
  ensembl transcript: ENST00000316418
  gene symbol: AHRR
  hgvsc: ENST00000316418.5:c.1238G>A
  hgvsp: ENSP00000323816.5:p.Arg413Lys
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426932
  ensembl transcript: ENST00000506456
  gene symbol: AHRR
  hgvsc: ENST00000506456.1:c.752G>A
  hgvsp: ENSP00000426932.1:p.Arg251Lys
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426076
  ensembl transcript: ENST00000511487
  gene symbol: AHRR
  hgvsc: ENST00000511487.1:c.149G>A
  hgvsp: ENSP00000426076.1:p.Arg50Lys
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424601
  ensembl transcript: ENST00000505113
  gene symbol: AHRR
  hgvsc: ENST00000505113.1:c.1184G>A
  hgvsp: ENSP00000424601.1:p.Arg395Lys
  variant of: http://identifiers.org/hgnc/346
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27888
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4115
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1764
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3491
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16084
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 673
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2738
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2447
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 498
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 941
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3850
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1449
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1013
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 776
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 401
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 230
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 217
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 510
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Arg413Lys
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: G
site quality: FS
site quality: QD
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ

5-434028-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 434028
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 434028
    reference: chr 5
allele count: 1
allele frequency: 9.463782105880794e-6
allele num: 105666
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424601
  ensembl transcript: ENST00000505113
  gene symbol: AHRR
  hgvsc: ENST00000505113.1:c.1185G>A
  hgvsp: ENST00000505113.1:c.1185G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424880
  ensembl transcript: ENST00000512529
  gene symbol: AHRR
  hgvsc: ENST00000512529.1:c.723G>A
  hgvsp: ENST00000512529.1:c.723G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426932
  ensembl transcript: ENST00000506456
  gene symbol: AHRR
  hgvsc: ENST00000506456.1:c.753G>A
  hgvsp: ENST00000506456.1:c.753G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000063438
  ensembl transcript: ENST00000507048
  gene symbol: AHRR
  hgvsc: ENST00000507048.1:n.984G>A
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000323816
  ensembl transcript: ENST00000316418
  gene symbol: AHRR
  hgvsc: ENST00000316418.5:c.1239G>A
  hgvsp: ENST00000316418.5:c.1239G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426076
  ensembl transcript: ENST00000511487
  gene symbol: AHRR
  hgvsc: ENST00000511487.1:c.150G>A
  hgvsp: ENST00000511487.1:c.150G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/346
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 671
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2424
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3506
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2722
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1834
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4104
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27771
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16156
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1462
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 153
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 317
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 424
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1105
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 513
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1018
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 451
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 761
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 413
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 934
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Arg413Arg
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum

5-434035-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 434035
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 434035
    reference: chr 5
allele count: 1
allele frequency: 9.425959091337543e-6
allele num: 106090
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426932
  ensembl transcript: ENST00000506456
  gene symbol: AHRR
  hgvsc: ENST00000506456.1:c.760C>G
  hgvsp: ENSP00000426932.1:p.Pro254Ala
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424601
  ensembl transcript: ENST00000505113
  gene symbol: AHRR
  hgvsc: ENST00000505113.1:c.1192C>G
  hgvsp: ENSP00000424601.1:p.Pro398Ala
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000323816
  ensembl transcript: ENST00000316418
  gene symbol: AHRR
  hgvsc: ENST00000316418.5:c.1246C>G
  hgvsp: ENSP00000323816.5:p.Pro416Ala
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426076
  ensembl transcript: ENST00000511487
  gene symbol: AHRR
  hgvsc: ENST00000511487.1:c.157C>G
  hgvsp: ENSP00000426076.1:p.Pro53Ala
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424880
  ensembl transcript: ENST00000512529
  gene symbol: AHRR
  hgvsc: ENST00000512529.1:c.730C>G
  hgvsp: ENSP00000424880.1:p.Pro244Ala
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000063438
  ensembl transcript: ENST00000507048
  gene symbol: AHRR
  hgvsc: ENST00000507048.1:n.991C>G
  variant of: http://identifiers.org/hgnc/346
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16529
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2113
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1456
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4089
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2638
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28213
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 669
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3573
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1487
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38675
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 368
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 545
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 497
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 233
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 787
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3066
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 284
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 318
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Pro416Ala
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
reference allele: C
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: FS
site quality: ReadPosRankSum

5-434045-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 434045
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 434045
    reference: chr 5
allele count: 28
allele frequency: 2.627134546819291e-4
allele num: 106580
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424601
  ensembl transcript: ENST00000505113
  gene symbol: AHRR
  hgvsc: ENST00000505113.1:c.1202C>G
  hgvsp: ENSP00000424601.1:p.Thr401Arg
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424880
  ensembl transcript: ENST00000512529
  gene symbol: AHRR
  hgvsc: ENST00000512529.1:c.740C>G
  hgvsp: ENSP00000424880.1:p.Thr247Arg
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000063438
  ensembl transcript: ENST00000507048
  gene symbol: AHRR
  hgvsc: ENST00000507048.1:n.1001C>G
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000323816
  ensembl transcript: ENST00000316418
  gene symbol: AHRR
  hgvsc: ENST00000316418.5:c.1256C>G
  hgvsp: ENSP00000323816.5:p.Thr419Arg
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426932
  ensembl transcript: ENST00000506456
  gene symbol: AHRR
  hgvsc: ENST00000506456.1:c.770C>G
  hgvsp: ENSP00000426932.1:p.Thr257Arg
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426076
  ensembl transcript: ENST00000511487
  gene symbol: AHRR
  hgvsc: ENST00000511487.1:c.167C>G
  hgvsp: ENSP00000426076.1:p.Thr56Arg
  variant of: http://identifiers.org/hgnc/346
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1705
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1028
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17216
  bin: 2.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28397
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3999
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 4.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2645
  bin: 7.5e0
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 3742
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 674
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 242
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1207
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 360
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2892
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 231
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3700
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 444
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39858
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1541
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 210
  bin: 5.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 595
  bin: 3.25e1
  variant carriers: 2
hgvs: p.Thr419Arg
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: African
population: Latino
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: QD

5-434047-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 434047
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 434047
    reference: chr 5
allele count: 1
allele frequency: 9.372598271692879e-6
allele num: 106694
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426076
  ensembl transcript: ENST00000511487
  gene symbol: AHRR
  hgvsc: ENST00000511487.1:c.169A>G
  hgvsp: ENSP00000426076.1:p.Lys57Glu
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424601
  ensembl transcript: ENST00000505113
  gene symbol: AHRR
  hgvsc: ENST00000505113.1:c.1204A>G
  hgvsp: ENSP00000424601.1:p.Lys402Glu
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426932
  ensembl transcript: ENST00000506456
  gene symbol: AHRR
  hgvsc: ENST00000506456.1:c.772A>G
  hgvsp: ENSP00000426932.1:p.Lys258Glu
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000323816
  ensembl transcript: ENST00000316418
  gene symbol: AHRR
  hgvsc: ENST00000316418.5:c.1258A>G
  hgvsp: ENSP00000323816.5:p.Lys420Glu
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000063438
  ensembl transcript: ENST00000507048
  gene symbol: AHRR
  hgvsc: ENST00000507048.1:n.1003A>G
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424880
  ensembl transcript: ENST00000512529
  gene symbol: AHRR
  hgvsc: ENST00000512529.1:c.742A>G
  hgvsp: ENSP00000424880.1:p.Lys248Glu
  variant of: http://identifiers.org/hgnc/346
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1602
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 253
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28592
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2649
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 929
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3986
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3748
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17281
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 669
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 238
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3730
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5759
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1216
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 398
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 186
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2924
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1560
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 271
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 536
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Lys420Glu
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: African
reference allele: A
site quality: MQ
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum

5-434052-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 434052
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 434052
    reference: chr 5
allele count: 5
allele frequency: 4.679807566312873e-5
allele num: 106842
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000063438
  ensembl transcript: ENST00000507048
  gene symbol: AHRR
  hgvsc: ENST00000507048.1:n.1008C>T
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426932
  ensembl transcript: ENST00000506456
  gene symbol: AHRR
  hgvsc: ENST00000506456.1:c.777C>T
  hgvsp: ENST00000506456.1:c.777C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424601
  ensembl transcript: ENST00000505113
  gene symbol: AHRR
  hgvsc: ENST00000505113.1:c.1209C>T
  hgvsp: ENST00000505113.1:c.1209C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424880
  ensembl transcript: ENST00000512529
  gene symbol: AHRR
  hgvsc: ENST00000512529.1:c.747C>T
  hgvsp: ENST00000512529.1:c.747C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426076
  ensembl transcript: ENST00000511487
  gene symbol: AHRR
  hgvsc: ENST00000511487.1:c.174C>T
  hgvsp: ENST00000511487.1:c.174C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000323816
  ensembl transcript: ENST00000316418
  gene symbol: AHRR
  hgvsc: ENST00000316418.5:c.1263C>T
  hgvsp: ENST00000316418.5:c.1263C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/346
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3910
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2704
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28750
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17475
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1413
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 780
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3815
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 675
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 257
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 545
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 186
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 256
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1575
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3669
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 317
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5819
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1227
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 336
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Pro421Pro
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: East Asian
population: Latino
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum

http://identifiers.org/exac.variant/5-434056-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 434056
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 434056
    reference: chr 5
allele count: 1
allele frequency: 9.349464275697002e-6
allele num: 106958
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424601
  ensembl transcript: ENST00000505113
  gene symbol: AHRR
  hgvsc: ENST00000505113.1:c.1213C>A
  hgvsp: ENSP00000424601.1:p.Pro405Thr
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426076
  ensembl transcript: ENST00000511487
  gene symbol: AHRR
  hgvsc: ENST00000511487.1:c.178C>A
  hgvsp: ENSP00000426076.1:p.Pro60Thr
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000323816
  ensembl transcript: ENST00000316418
  gene symbol: AHRR
  hgvsc: ENST00000316418.5:c.1267C>A
  hgvsp: ENSP00000323816.5:p.Pro423Thr
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426932
  ensembl transcript: ENST00000506456
  gene symbol: AHRR
  hgvsc: ENST00000506456.1:c.781C>A
  hgvsp: ENSP00000426932.1:p.Pro261Thr
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424880
  ensembl transcript: ENST00000512529
  gene symbol: AHRR
  hgvsc: ENST00000512529.1:c.751C>A
  hgvsp: ENSP00000424880.1:p.Pro251Thr
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000063438
  ensembl transcript: ENST00000507048
  gene symbol: AHRR
  hgvsc: ENST00000507048.1:n.1012C>A
  variant of: http://identifiers.org/hgnc/346
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17726
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28630
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1334
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3834
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2765
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3877
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 448
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2861
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 284
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3563
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 309
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 402
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 341
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 555
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 248
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1595
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Pro423Thr
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
reference allele: C
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ

5-434064-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 434064
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 434064
    reference: chr 5
allele count: 1
allele frequency: 9.324878776575904e-6
allele num: 107240
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426932
  ensembl transcript: ENST00000506456
  gene symbol: AHRR
  hgvsc: ENST00000506456.1:c.789A>G
  hgvsp: ENST00000506456.1:c.789A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000323816
  ensembl transcript: ENST00000316418
  gene symbol: AHRR
  hgvsc: ENST00000316418.5:c.1275A>G
  hgvsp: ENST00000316418.5:c.1275A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000063438
  ensembl transcript: ENST00000507048
  gene symbol: AHRR
  hgvsc: ENST00000507048.1:n.1020A>G
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424601
  ensembl transcript: ENST00000505113
  gene symbol: AHRR
  hgvsc: ENST00000505113.1:c.1221A>G
  hgvsp: ENST00000505113.1:c.1221A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424880
  ensembl transcript: ENST00000512529
  gene symbol: AHRR
  hgvsc: ENST00000512529.1:c.759A>G
  hgvsp: ENST00000512529.1:c.759A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426076
  ensembl transcript: ENST00000511487
  gene symbol: AHRR
  hgvsc: ENST00000511487.1:c.186A>G
  hgvsp: ENST00000511487.1:c.186A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/346
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1174
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2937
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18030
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3908
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28727
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 252
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3619
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5964
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 186
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 383
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1265
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 252
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 191
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3001
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3371
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Thr425Thr
num of homozygotes: 0
population: European (Finnish)
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
reference allele: A
site quality: DP
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum

5-434066-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 434066
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 434066
    reference: chr 5
allele count: 41
allele frequency: 3.824056111028205e-4
allele num: 107216
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426932
  ensembl transcript: ENST00000506456
  gene symbol: AHRR
  hgvsc: ENST00000506456.1:c.791C>T
  hgvsp: ENSP00000426932.1:p.Ala264Val
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000323816
  ensembl transcript: ENST00000316418
  gene symbol: AHRR
  hgvsc: ENST00000316418.5:c.1277C>T
  hgvsp: ENSP00000323816.5:p.Ala426Val
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000063438
  ensembl transcript: ENST00000507048
  gene symbol: AHRR
  hgvsc: ENST00000507048.1:n.1022C>T
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424601
  ensembl transcript: ENST00000505113
  gene symbol: AHRR
  hgvsc: ENST00000505113.1:c.1223C>T
  hgvsp: ENSP00000424601.1:p.Ala408Val
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426076
  ensembl transcript: ENST00000511487
  gene symbol: AHRR
  hgvsc: ENST00000511487.1:c.188C>T
  hgvsp: ENSP00000426076.1:p.Ala63Val
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424880
  ensembl transcript: ENST00000512529
  gene symbol: AHRR
  hgvsc: ENST00000512529.1:c.761C>T
  hgvsp: ENSP00000424880.1:p.Ala254Val
  variant of: http://identifiers.org/hgnc/346
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2965
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3565
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1175
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18087
  bin: 2.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28577
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 4.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 722
  bin: 3.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 4009
  bin: 3.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 4.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 312
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 161
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 230
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 329
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1244
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 339
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5913
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 239
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3337
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ala426Val
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
population: African
population: East Asian
population: Latino
reference allele: C
site quality: ClippingRankSum
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: DP

5-434067-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 434067
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 434067
    reference: chr 5
allele count: 1
allele frequency: 9.320533134495293e-6
allele num: 107290
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000323816
  ensembl transcript: ENST00000316418
  gene symbol: AHRR
  hgvsc: ENST00000316418.5:c.1278G>A
  hgvsp: ENST00000316418.5:c.1278G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426932
  ensembl transcript: ENST00000506456
  gene symbol: AHRR
  hgvsc: ENST00000506456.1:c.792G>A
  hgvsp: ENST00000506456.1:c.792G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424880
  ensembl transcript: ENST00000512529
  gene symbol: AHRR
  hgvsc: ENST00000512529.1:c.762G>A
  hgvsp: ENST00000512529.1:c.762G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000063438
  ensembl transcript: ENST00000507048
  gene symbol: AHRR
  hgvsc: ENST00000507048.1:n.1023G>A
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424601
  ensembl transcript: ENST00000505113
  gene symbol: AHRR
  hgvsc: ENST00000505113.1:c.1224G>A
  hgvsp: ENST00000505113.1:c.1224G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426076
  ensembl transcript: ENST00000511487
  gene symbol: AHRR
  hgvsc: ENST00000511487.1:c.189G>A
  hgvsp: ENST00000511487.1:c.189G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/346
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18169
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3520
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 511
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28595
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3015
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1157
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3997
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3321
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 223
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 191
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 216
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 192
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 377
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 281
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1273
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 304
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 459
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Ala426Ala
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: InbreedingCoeff

http://identifiers.org/exac.variant/5-434070-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 434070
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 434070
    reference: chr 5
allele count: 3
allele frequency: 2.792412085559506e-5
allele num: 107434
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426932
  ensembl transcript: ENST00000506456
  gene symbol: AHRR
  hgvsc: ENST00000506456.1:c.795A>C
  hgvsp: ENST00000506456.1:c.795A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000323816
  ensembl transcript: ENST00000316418
  gene symbol: AHRR
  hgvsc: ENST00000316418.5:c.1281A>C
  hgvsp: ENST00000316418.5:c.1281A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000063438
  ensembl transcript: ENST00000507048
  gene symbol: AHRR
  hgvsc: ENST00000507048.1:n.1026A>C
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424601
  ensembl transcript: ENST00000505113
  gene symbol: AHRR
  hgvsc: ENST00000505113.1:c.1227A>C
  hgvsp: ENST00000505113.1:c.1227A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426076
  ensembl transcript: ENST00000511487
  gene symbol: AHRR
  hgvsc: ENST00000511487.1:c.192A>C
  hgvsp: ENST00000511487.1:c.192A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424880
  ensembl transcript: ENST00000512529
  gene symbol: AHRR
  hgvsc: ENST00000512529.1:c.765A>C
  hgvsp: ENST00000512529.1:c.765A>C(p.%3D)
  variant of: http://identifiers.org/hgnc/346
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18281
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 487
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3095
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3444
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28576
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1160
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 697
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3985
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41322
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1638
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 133
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 265
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 580
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3246
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 359
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 312
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1291
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3206
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Gly427Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
population: African
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum

5-434077-AGTGAGGATG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 434077
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 434068
    reference: chr 5
allele count: 1
allele frequency: 9.30076824345691e-6
allele num: 107518
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426932
  ensembl transcript: ENST00000506456
  gene symbol: AHRR
  hgvsc: ENST00000506456.1:c.806_814delAGGATGGTG
  hgvsp: ENSP00000426932.1:p.Glu269_Gly271del
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424601
  ensembl transcript: ENST00000505113
  gene symbol: AHRR
  hgvsp: ENSP00000424601.1:p.Glu413_Gly415del
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424880
  ensembl transcript: ENST00000512529
  gene symbol: AHRR
  hgvsc: ENST00000512529.1:c.776_784delAGGATGGTG
  hgvsp: ENSP00000424880.1:p.Glu259_Gly261del
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000323816
  ensembl transcript: ENST00000316418
  gene symbol: AHRR
  hgvsp: ENSP00000323816.5:p.Glu431_Gly433del
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000063438
  ensembl transcript: ENST00000507048
  gene symbol: AHRR
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426076
  ensembl transcript: ENST00000511487
  gene symbol: AHRR
  hgvsc: ENST00000511487.1:c.203_211delAGGATGGTG
  hgvsp: ENSP00000426076.1:p.Glu68_Gly70del
  variant of: http://identifiers.org/hgnc/346
canonical: true
consequence: inframe deletion
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 3250
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3293
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 478
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4000
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 694
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1191
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28483
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18390
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 315
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 180
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 124
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6020
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 380
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 457
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3327
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1289
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1636
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Glu431_Gly433del
num of homozygotes: 0
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
reference allele: AGTGAGGATG
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: BaseQRankSum

5-434079-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 434079
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 434079
    reference: chr 5
allele count: 1
allele frequency: 9.302152518092687e-6
allele num: 107502
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424880
  ensembl transcript: ENST00000512529
  gene symbol: AHRR
  hgvsc: ENST00000512529.1:c.774T>C
  hgvsp: ENST00000512529.1:c.774T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000063438
  ensembl transcript: ENST00000507048
  gene symbol: AHRR
  hgvsc: ENST00000507048.1:n.1035T>C
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426076
  ensembl transcript: ENST00000511487
  gene symbol: AHRR
  hgvsc: ENST00000511487.1:c.201T>C
  hgvsp: ENST00000511487.1:c.201T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424601
  ensembl transcript: ENST00000505113
  gene symbol: AHRR
  hgvsc: ENST00000505113.1:c.1236T>C
  hgvsp: ENST00000505113.1:c.1236T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000323816
  ensembl transcript: ENST00000316418
  gene symbol: AHRR
  hgvsc: ENST00000316418.5:c.1290T>C
  hgvsp: ENST00000316418.5:c.1290T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426932
  ensembl transcript: ENST00000506456
  gene symbol: AHRR
  hgvsc: ENST00000506456.1:c.804T>C
  hgvsp: ENST00000506456.1:c.804T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/346
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 695
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3252
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1237
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 260
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18391
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3291
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4011
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28374
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 396
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 358
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3314
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 457
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3084
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5998
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1632
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 283
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ser430Ser
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum

5-434087-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 434087
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 434087
    reference: chr 5
allele count: 1
allele frequency: 9.30076824345691e-6
allele num: 107518
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424880
  ensembl transcript: ENST00000512529
  gene symbol: AHRR
  hgvsc: ENST00000512529.1:c.782G>A
  hgvsp: ENSP00000424880.1:p.Gly261Asp
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000323816
  ensembl transcript: ENST00000316418
  gene symbol: AHRR
  hgvsc: ENST00000316418.5:c.1298G>A
  hgvsp: ENSP00000323816.5:p.Gly433Asp
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426932
  ensembl transcript: ENST00000506456
  gene symbol: AHRR
  hgvsc: ENST00000506456.1:c.812G>A
  hgvsp: ENSP00000426932.1:p.Gly271Asp
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424601
  ensembl transcript: ENST00000505113
  gene symbol: AHRR
  hgvsc: ENST00000505113.1:c.1244G>A
  hgvsp: ENSP00000424601.1:p.Gly415Asp
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000063438
  ensembl transcript: ENST00000507048
  gene symbol: AHRR
  hgvsc: ENST00000507048.1:n.1043G>A
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426076
  ensembl transcript: ENST00000511487
  gene symbol: AHRR
  hgvsc: ENST00000511487.1:c.209G>A
  hgvsp: ENSP00000426076.1:p.Gly70Asp
  variant of: http://identifiers.org/hgnc/346
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28001
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18451
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1423
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3095
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3467
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4017
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 237
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 445
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 298
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 200
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 442
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6003
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 404
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2950
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40840
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Gly433Asp
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum

5-434096-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 434096
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 434096
    reference: chr 5
allele count: 1
allele frequency: 9.294716882923746e-6
allele num: 107588
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424601
  ensembl transcript: ENST00000505113
  gene symbol: AHRR
  hgvsc: ENST00000505113.1:c.1253C>G
  hgvsp: ENSP00000424601.1:p.Pro418Arg
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424880
  ensembl transcript: ENST00000512529
  gene symbol: AHRR
  hgvsc: ENST00000512529.1:c.791C>G
  hgvsp: ENSP00000424880.1:p.Pro264Arg
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426076
  ensembl transcript: ENST00000511487
  gene symbol: AHRR
  hgvsc: ENST00000511487.1:c.218C>G
  hgvsp: ENSP00000426076.1:p.Pro73Arg
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000323816
  ensembl transcript: ENST00000316418
  gene symbol: AHRR
  hgvsc: ENST00000316418.5:c.1307C>G
  hgvsp: ENSP00000323816.5:p.Pro436Arg
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426932
  ensembl transcript: ENST00000506456
  gene symbol: AHRR
  hgvsc: ENST00000506456.1:c.821C>G
  hgvsp: ENSP00000426932.1:p.Pro274Arg
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000063438
  ensembl transcript: ENST00000507048
  gene symbol: AHRR
  hgvsc: ENST00000507048.1:n.1052C>G
  variant of: http://identifiers.org/hgnc/346
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27609
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18530
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2823
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3722
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 698
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 266
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4041
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1639
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 249
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 545
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 461
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 521
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1606
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3861
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2698
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40522
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 282
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 227
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5950
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Pro436Arg
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Other
population: South Asian
population: Latino
population: European (Finnish)
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

5-434105-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 434105
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 434105
    reference: chr 5
allele count: 1
allele frequency: 9.285051067780874e-6
allele num: 107700
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000063438
  ensembl transcript: ENST00000507048
  gene symbol: AHRR
  hgvsc: ENST00000507048.1:n.1061A>G
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000323816
  ensembl transcript: ENST00000316418
  gene symbol: AHRR
  hgvsc: ENST00000316418.5:c.1316A>G
  hgvsp: ENSP00000323816.5:p.Gln439Arg
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424880
  ensembl transcript: ENST00000512529
  gene symbol: AHRR
  hgvsc: ENST00000512529.1:c.800A>G
  hgvsp: ENSP00000424880.1:p.Gln267Arg
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426076
  ensembl transcript: ENST00000511487
  gene symbol: AHRR
  hgvsc: ENST00000511487.1:c.227A>G
  hgvsp: ENSP00000426076.1:p.Gln76Arg
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426932
  ensembl transcript: ENST00000506456
  gene symbol: AHRR
  hgvsc: ENST00000506456.1:c.830A>G
  hgvsp: ENSP00000426932.1:p.Gln277Arg
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424601
  ensembl transcript: ENST00000505113
  gene symbol: AHRR
  hgvsc: ENST00000505113.1:c.1262A>G
  hgvsp: ENSP00000424601.1:p.Gln421Arg
  variant of: http://identifiers.org/hgnc/346
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27188
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2508
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3989
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 981
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4004
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1954
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18574
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 227
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5918
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4346
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 264
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 312
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 372
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2414
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 186
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Gln439Arg
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: Other
population: African
population: Latino
reference allele: A
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum

http://identifiers.org/exac.variant/5-434109-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 434109
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 434109
    reference: chr 5
allele count: 12
allele frequency: 1.113255158082233e-4
allele num: 107792
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424601
  ensembl transcript: ENST00000505113
  gene symbol: AHRR
  hgvsc: ENST00000505113.1:c.1266C>A
  hgvsp: ENST00000505113.1:c.1266C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000063438
  ensembl transcript: ENST00000507048
  gene symbol: AHRR
  hgvsc: ENST00000507048.1:n.1065C>A
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424880
  ensembl transcript: ENST00000512529
  gene symbol: AHRR
  hgvsc: ENST00000512529.1:c.804C>A
  hgvsp: ENST00000512529.1:c.804C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426932
  ensembl transcript: ENST00000506456
  gene symbol: AHRR
  hgvsc: ENST00000506456.1:c.834C>A
  hgvsp: ENST00000506456.1:c.834C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426076
  ensembl transcript: ENST00000511487
  gene symbol: AHRR
  hgvsc: ENST00000511487.1:c.231C>A
  hgvsp: ENST00000511487.1:c.231C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000323816
  ensembl transcript: ENST00000316418
  gene symbol: AHRR
  hgvsc: ENST00000316418.5:c.1320C>A
  hgvsp: ENST00000316418.5:c.1320C>A(p.%3D)
  variant of: http://identifiers.org/hgnc/346
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4001
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26926
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1110
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4075
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2389
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 123
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2105
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 704
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18575
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 266
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1560
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5909
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 320
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 264
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 468
  bin: 9.75e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2344
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Pro440Pro
num of homozygotes: 0
population: African
population: Other
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum

5-434112-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 434112
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 434112
    reference: chr 5
allele count: 1
allele frequency: 9.282637754344274e-6
allele num: 107728
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000063438
  ensembl transcript: ENST00000507048
  gene symbol: AHRR
  hgvsc: ENST00000507048.1:n.1068C>T
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424880
  ensembl transcript: ENST00000512529
  gene symbol: AHRR
  hgvsc: ENST00000512529.1:c.807C>T
  hgvsp: ENST00000512529.1:c.807C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426932
  ensembl transcript: ENST00000506456
  gene symbol: AHRR
  hgvsc: ENST00000506456.1:c.837C>T
  hgvsp: ENST00000506456.1:c.837C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426076
  ensembl transcript: ENST00000511487
  gene symbol: AHRR
  hgvsc: ENST00000511487.1:c.234C>T
  hgvsp: ENST00000511487.1:c.234C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424601
  ensembl transcript: ENST00000505113
  gene symbol: AHRR
  hgvsc: ENST00000505113.1:c.1269C>T
  hgvsp: ENST00000505113.1:c.1269C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000323816
  ensembl transcript: ENST00000316418
  gene symbol: AHRR
  hgvsc: ENST00000316418.5:c.1323C>T
  hgvsp: ENST00000316418.5:c.1323C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/346
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 18484
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1346
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4165
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2290
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2298
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4026
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26570
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 713
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 681
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 471
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 317
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 773
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1548
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4578
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 255
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5853
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 463
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 556
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 219
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ser441Ser
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum

5-434123-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 434123
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 434123
    reference: chr 5
allele count: 3
allele frequency: 2.784119383039145e-5
allele num: 107754
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426076
  ensembl transcript: ENST00000511487
  gene symbol: AHRR
  hgvsc: ENST00000511487.1:c.245C>T
  hgvsp: ENSP00000426076.1:p.Pro82Leu
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424601
  ensembl transcript: ENST00000505113
  gene symbol: AHRR
  hgvsc: ENST00000505113.1:c.1280C>T
  hgvsp: ENSP00000424601.1:p.Pro427Leu
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426932
  ensembl transcript: ENST00000506456
  gene symbol: AHRR
  hgvsc: ENST00000506456.1:c.848C>T
  hgvsp: ENSP00000426932.1:p.Pro283Leu
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000323816
  ensembl transcript: ENST00000316418
  gene symbol: AHRR
  hgvsc: ENST00000316418.5:c.1334C>T
  hgvsp: ENSP00000323816.5:p.Pro445Leu
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000063438
  ensembl transcript: ENST00000507048
  gene symbol: AHRR
  hgvsc: ENST00000507048.1:n.1079C>T
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424880
  ensembl transcript: ENST00000512529
  gene symbol: AHRR
  hgvsc: ENST00000512529.1:c.818C>T
  hgvsp: ENSP00000424880.1:p.Pro273Leu
  variant of: http://identifiers.org/hgnc/346
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18251
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25639
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2092
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1941
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4035
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4390
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 124
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 718
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2799
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1004
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 563
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 180
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1937
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 161
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 303
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 768
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 312
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5720
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1014
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 460
  bin: 9.75e1
  variant carriers: 3
hgvs: p.Pro445Leu
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: South Asian
population: African
population: East Asian
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: QD

5-434127-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 434127
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 434127
    reference: chr 5
allele count: 2
allele frequency: 1.849864959857931e-5
allele num: 108116
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000063438
  ensembl transcript: ENST00000507048
  gene symbol: AHRR
  hgvsc: ENST00000507048.1:n.1083C>T
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000323816
  ensembl transcript: ENST00000316418
  gene symbol: AHRR
  hgvsc: ENST00000316418.5:c.1338C>T
  hgvsp: ENST00000316418.5:c.1338C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426932
  ensembl transcript: ENST00000506456
  gene symbol: AHRR
  hgvsc: ENST00000506456.1:c.852C>T
  hgvsp: ENST00000506456.1:c.852C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426076
  ensembl transcript: ENST00000511487
  gene symbol: AHRR
  hgvsc: ENST00000511487.1:c.249C>T
  hgvsp: ENST00000511487.1:c.249C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424880
  ensembl transcript: ENST00000512529
  gene symbol: AHRR
  hgvsc: ENST00000512529.1:c.822C>T
  hgvsp: ENST00000512529.1:c.822C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424601
  ensembl transcript: ENST00000505113
  gene symbol: AHRR
  hgvsc: ENST00000505113.1:c.1284C>T
  hgvsp: ENST00000505113.1:c.1284C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/346
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1715
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2971
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25436
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 702
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3956
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4524
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18273
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2312
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 614
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 458
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 321
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37491
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 840
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 452
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5493
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1741
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 193
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1108
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Pro446Pro
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: Other
population: European (Finnish)
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: DP

5-434129-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 434129
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 434129
    reference: chr 5
allele count: 1
allele frequency: 9.242998428690267e-6
allele num: 108190
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000063438
  ensembl transcript: ENST00000507048
  gene symbol: AHRR
  hgvsc: ENST00000507048.1:n.1085C>T
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426932
  ensembl transcript: ENST00000506456
  gene symbol: AHRR
  hgvsc: ENST00000506456.1:c.854C>T
  hgvsp: ENSP00000426932.1:p.Ser285Phe
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426076
  ensembl transcript: ENST00000511487
  gene symbol: AHRR
  hgvsc: ENST00000511487.1:c.251C>T
  hgvsp: ENSP00000426076.1:p.Ser84Phe
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424880
  ensembl transcript: ENST00000512529
  gene symbol: AHRR
  hgvsc: ENST00000512529.1:c.824C>T
  hgvsp: ENSP00000424880.1:p.Ser275Phe
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424601
  ensembl transcript: ENST00000505113
  gene symbol: AHRR
  hgvsc: ENST00000505113.1:c.1286C>T
  hgvsp: ENSP00000424601.1:p.Ser429Phe
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000323816
  ensembl transcript: ENST00000316418
  gene symbol: AHRR
  hgvsc: ENST00000316418.5:c.1340C>T
  hgvsp: ENSP00000323816.5:p.Ser447Phe
  variant of: http://identifiers.org/hgnc/346
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4608
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1602
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2360
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 692
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3950
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18230
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25410
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3035
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 445
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5636
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 460
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 560
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 866
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1526
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 384
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 423
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37428
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 620
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5689
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ser447Phe
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: East Asian
population: Other
reference allele: C
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD

5-434133-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 434133
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 434133
    reference: chr 5
allele count: 4
allele frequency: 3.690241157259627e-5
allele num: 108394
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000323816
  ensembl transcript: ENST00000316418
  gene symbol: AHRR
  hgvsc: ENST00000316418.5:c.1344G>C
  hgvsp: ENST00000316418.5:c.1344G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426932
  ensembl transcript: ENST00000506456
  gene symbol: AHRR
  hgvsc: ENST00000506456.1:c.858G>C
  hgvsp: ENST00000506456.1:c.858G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426076
  ensembl transcript: ENST00000511487
  gene symbol: AHRR
  hgvsc: ENST00000511487.1:c.255G>C
  hgvsp: ENST00000511487.1:c.255G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424880
  ensembl transcript: ENST00000512529
  gene symbol: AHRR
  hgvsc: ENST00000512529.1:c.828G>C
  hgvsp: ENST00000512529.1:c.828G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000063438
  ensembl transcript: ENST00000507048
  gene symbol: AHRR
  hgvsc: ENST00000507048.1:n.1089G>C
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424601
  ensembl transcript: ENST00000505113
  gene symbol: AHRR
  hgvsc: ENST00000505113.1:c.1290G>C
  hgvsp: ENST00000505113.1:c.1290G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/346
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2651
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25356
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 259
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4668
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1448
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18070
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 681
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3167
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3861
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 725
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1241
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 461
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 412
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5801
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 318
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 325
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36895
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1481
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Leu448Leu
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Other
population: African
population: Latino
reference allele: G
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum

5-434134-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 434134
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 434134
    reference: chr 5
allele count: 5
allele frequency: 4.616549406311746e-5
allele num: 108306
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000063438
  ensembl transcript: ENST00000507048
  gene symbol: AHRR
  hgvsc: ENST00000507048.1:n.1090C>T
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426932
  ensembl transcript: ENST00000506456
  gene symbol: AHRR
  hgvsc: ENST00000506456.1:c.859C>T
  hgvsp: ENSP00000426932.1:p.Arg287Cys
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424880
  ensembl transcript: ENST00000512529
  gene symbol: AHRR
  hgvsc: ENST00000512529.1:c.829C>T
  hgvsp: ENSP00000424880.1:p.Arg277Cys
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426076
  ensembl transcript: ENST00000511487
  gene symbol: AHRR
  hgvsc: ENST00000511487.1:c.256C>T
  hgvsp: ENSP00000426076.1:p.Arg86Cys
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000323816
  ensembl transcript: ENST00000316418
  gene symbol: AHRR
  hgvsc: ENST00000316418.5:c.1345C>T
  hgvsp: ENSP00000323816.5:p.Arg449Cys
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424601
  ensembl transcript: ENST00000505113
  gene symbol: AHRR
  hgvsc: ENST00000505113.1:c.1291C>T
  hgvsp: ENSP00000424601.1:p.Arg431Cys
  variant of: http://identifiers.org/hgnc/346
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3906
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1394
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2712
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4653
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3228
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18031
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25281
  bin: 2.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 408
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1452
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 327
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1136
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 541
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1011
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 516
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5795
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1495
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5595
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 345
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Arg449Cys
num of homozygotes: 0
population: South Asian
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: C
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum

5-434135-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 434135
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 434135
    reference: chr 5
allele count: 3
allele frequency: 2.767731935936232e-5
allele num: 108392
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424601
  ensembl transcript: ENST00000505113
  gene symbol: AHRR
  hgvsc: ENST00000505113.1:c.1292G>A
  hgvsp: ENSP00000424601.1:p.Arg431His
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000323816
  ensembl transcript: ENST00000316418
  gene symbol: AHRR
  hgvsc: ENST00000316418.5:c.1346G>A
  hgvsp: ENSP00000323816.5:p.Arg449His
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424880
  ensembl transcript: ENST00000512529
  gene symbol: AHRR
  hgvsc: ENST00000512529.1:c.830G>A
  hgvsp: ENSP00000424880.1:p.Arg277His
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426932
  ensembl transcript: ENST00000506456
  gene symbol: AHRR
  hgvsc: ENST00000506456.1:c.860G>A
  hgvsp: ENSP00000426932.1:p.Arg287His
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000063438
  ensembl transcript: ENST00000507048
  gene symbol: AHRR
  hgvsc: ENST00000507048.1:n.1091G>A
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426076
  ensembl transcript: ENST00000511487
  gene symbol: AHRR
  hgvsc: ENST00000511487.1:c.257G>A
  hgvsp: ENSP00000426076.1:p.Arg86His
  variant of: http://identifiers.org/hgnc/346
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4675
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1329
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18011
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2877
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 682
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 25164
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3876
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3276
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 60
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5496
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5770
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1039
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1370
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 456
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 214
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 727
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 330
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1348
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 496
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 856
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Arg449His
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum

5-434140-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 434140
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 434140
    reference: chr 5
allele count: 2
allele frequency: 1.8311999853504e-5
allele num: 109218
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000063438
  ensembl transcript: ENST00000507048
  gene symbol: AHRR
  hgvsc: ENST00000507048.1:n.1096A>G
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426932
  ensembl transcript: ENST00000506456
  gene symbol: AHRR
  hgvsc: ENST00000506456.1:c.865A>G
  hgvsp: ENSP00000426932.1:p.Met289Val
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424880
  ensembl transcript: ENST00000512529
  gene symbol: AHRR
  hgvsc: ENST00000512529.1:c.835A>G
  hgvsp: ENSP00000424880.1:p.Met279Val
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424601
  ensembl transcript: ENST00000505113
  gene symbol: AHRR
  hgvsc: ENST00000505113.1:c.1297A>G
  hgvsp: ENSP00000424601.1:p.Met433Val
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000323816
  ensembl transcript: ENST00000316418
  gene symbol: AHRR
  hgvsc: ENST00000316418.5:c.1351A>G
  hgvsp: ENSP00000323816.5:p.Met451Val
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426076
  ensembl transcript: ENST00000511487
  gene symbol: AHRR
  hgvsc: ENST00000511487.1:c.262A>G
  hgvsp: ENSP00000426076.1:p.Met88Val
  variant of: http://identifiers.org/hgnc/346
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18138
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25437
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4671
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1023
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2883
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3795
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 113
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3323
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1148
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1340
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5571
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 726
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 252
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1368
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 327
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36873
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 558
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 274
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Met451Val
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: DP

5-434146-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 434146
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 434146
    reference: chr 5
allele count: 726
allele frequency: 6.592448649728493e-3
allele num: 110126
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426932
  ensembl transcript: ENST00000506456
  gene symbol: AHRR
  hgvsc: ENST00000506456.1:c.871C>T
  hgvsp: ENSP00000426932.1:p.Arg291Cys
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424880
  ensembl transcript: ENST00000512529
  gene symbol: AHRR
  hgvsc: ENST00000512529.1:c.841C>T
  hgvsp: ENSP00000424880.1:p.Arg281Cys
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000323816
  ensembl transcript: ENST00000316418
  gene symbol: AHRR
  hgvsc: ENST00000316418.5:c.1357C>T
  hgvsp: ENSP00000323816.5:p.Arg453Cys
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424601
  ensembl transcript: ENST00000505113
  gene symbol: AHRR
  hgvsc: ENST00000505113.1:c.1303C>T
  hgvsp: ENSP00000424601.1:p.Arg435Cys
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000063438
  ensembl transcript: ENST00000507048
  gene symbol: AHRR
  hgvsc: ENST00000507048.1:n.1102C>T
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426076
  ensembl transcript: ENST00000511487
  gene symbol: AHRR
  hgvsc: ENST00000511487.1:c.268C>T
  hgvsp: ENSP00000426076.1:p.Arg90Cys
  variant of: http://identifiers.org/hgnc/346
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 25667
  bin: 2.25e1
  variant carriers: 62
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 8.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 2872
  bin: 1.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 119
  bin: 5.25e1
  variant carriers: 63
genotype depth: GenotypeDepth
  all individuals: 3268
  bin: 1.25e1
  variant carriers: 37
genotype depth: GenotypeDepth
  all individuals: 729
  bin: 3.75e1
  variant carriers: 102
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 5.75e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 4384
  bin: 7.5e0
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 25
  bin: 9.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 3886
  bin: 3.25e1
  variant carriers: 110
genotype depth: GenotypeDepth
  all individuals: 21
  bin: 6.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 7.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 4.75e1
  variant carriers: 70
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 6.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 809
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 7.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 18041
  bin: 2.75e1
  variant carriers: 82
genotype depth: GenotypeDepth
  all individuals: 3
  bin: 9.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 4.25e1
  variant carriers: 92
genotype quality: GenotypeQuality
  all individuals: 1477
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1350
  bin: 3.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 5470
  bin: 6.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 1128
  bin: 9.75e1
  variant carriers: 713
genotype quality: GenotypeQuality
  all individuals: 1109
  bin: 7.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 5744
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 198
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 600
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 816
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 396
  bin: 5.75e1
  variant carriers: 1
hgvs: p.Arg453Cys
num of homozygotes: 4
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: Latino
population: Other
reference allele: C
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: QD
site quality: DP

5-434147-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 434147
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 434147
    reference: chr 5
allele count: 4
allele frequency: 3.620040544454098e-5
allele num: 110496
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424601
  ensembl transcript: ENST00000505113
  gene symbol: AHRR
  hgvsc: ENST00000505113.1:c.1304G>A
  hgvsp: ENSP00000424601.1:p.Arg435His
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000323816
  ensembl transcript: ENST00000316418
  gene symbol: AHRR
  hgvsc: ENST00000316418.5:c.1358G>A
  hgvsp: ENSP00000323816.5:p.Arg453His
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426932
  ensembl transcript: ENST00000506456
  gene symbol: AHRR
  hgvsc: ENST00000506456.1:c.872G>A
  hgvsp: ENSP00000426932.1:p.Arg291His
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000063438
  ensembl transcript: ENST00000507048
  gene symbol: AHRR
  hgvsc: ENST00000507048.1:n.1103G>A
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426076
  ensembl transcript: ENST00000511487
  gene symbol: AHRR
  hgvsc: ENST00000511487.1:c.269G>A
  hgvsp: ENSP00000426076.1:p.Arg90His
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424880
  ensembl transcript: ENST00000512529
  gene symbol: AHRR
  hgvsc: ENST00000512529.1:c.842G>A
  hgvsp: ENSP00000424880.1:p.Arg281His
  variant of: http://identifiers.org/hgnc/346
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3878
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18281
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4292
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2841
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3224
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 26007
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 768
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1534
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37436
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 810
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 592
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1356
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1330
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1157
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5672
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 262
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 194
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1148
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Arg453His
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: DP

5-434148-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 434148
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 434148
    reference: chr 5
allele count: 1
allele frequency: 9.045189768081334e-6
allele num: 110556
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424601
  ensembl transcript: ENST00000505113
  gene symbol: AHRR
  hgvsc: ENST00000505113.1:c.1305C>T
  hgvsp: ENST00000505113.1:c.1305C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426076
  ensembl transcript: ENST00000511487
  gene symbol: AHRR
  hgvsc: ENST00000511487.1:c.270C>T
  hgvsp: ENST00000511487.1:c.270C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424880
  ensembl transcript: ENST00000512529
  gene symbol: AHRR
  hgvsc: ENST00000512529.1:c.843C>T
  hgvsp: ENST00000512529.1:c.843C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000323816
  ensembl transcript: ENST00000316418
  gene symbol: AHRR
  hgvsc: ENST00000316418.5:c.1359C>T
  hgvsp: ENST00000316418.5:c.1359C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426932
  ensembl transcript: ENST00000506456
  gene symbol: AHRR
  hgvsc: ENST00000506456.1:c.873C>T
  hgvsp: ENST00000506456.1:c.873C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000063438
  ensembl transcript: ENST00000507048
  gene symbol: AHRR
  hgvsc: ENST00000507048.1:n.1104C>T
  variant of: http://identifiers.org/hgnc/346
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3225
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3897
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 666
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4166
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2830
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26040
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 18377
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1542
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 600
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37477
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 507
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 479
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 213
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 734
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1127
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 304
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 791
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Arg453Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: Other
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: ReadPosRankSum

5-434149-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 434149
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 434149
    reference: chr 5
allele count: 3
allele frequency: 2.696629213483146e-5
allele num: 111250
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426932
  ensembl transcript: ENST00000506456
  gene symbol: AHRR
  hgvsc: ENST00000506456.1:c.874G>A
  hgvsp: ENSP00000426932.1:p.Gly292Ser
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424601
  ensembl transcript: ENST00000505113
  gene symbol: AHRR
  hgvsc: ENST00000505113.1:c.1306G>A
  hgvsp: ENSP00000424601.1:p.Gly436Ser
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000063438
  ensembl transcript: ENST00000507048
  gene symbol: AHRR
  hgvsc: ENST00000507048.1:n.1105G>A
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000323816
  ensembl transcript: ENST00000316418
  gene symbol: AHRR
  hgvsc: ENST00000316418.5:c.1360G>A
  hgvsp: ENSP00000323816.5:p.Gly454Ser
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424880
  ensembl transcript: ENST00000512529
  gene symbol: AHRR
  hgvsc: ENST00000512529.1:c.844G>A
  hgvsp: ENSP00000424880.1:p.Gly282Ser
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426076
  ensembl transcript: ENST00000511487
  gene symbol: AHRR
  hgvsc: ENST00000511487.1:c.271G>A
  hgvsp: ENSP00000426076.1:p.Gly91Ser
  variant of: http://identifiers.org/hgnc/346
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 120
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 241
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3165
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18492
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 57
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4025
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2680
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 691
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26355
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3890
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 545
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 669
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 156
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1557
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 512
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 470
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5742
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5449
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Gly454Ser
num of homozygotes: 0
population: Latino
population: East Asian
population: South Asian
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD

5-434162-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 434162
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 434162
    reference: chr 5
allele count: 2
allele frequency: 1.7561421070193e-5
allele num: 113886
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000323816
  ensembl transcript: ENST00000316418
  gene symbol: AHRR
  hgvsc: ENST00000316418.5:c.1373C>T
  hgvsp: ENSP00000323816.5:p.Pro458Leu
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426076
  ensembl transcript: ENST00000511487
  gene symbol: AHRR
  hgvsc: ENST00000511487.1:c.284C>T
  hgvsp: ENSP00000426076.1:p.Pro95Leu
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424880
  ensembl transcript: ENST00000512529
  gene symbol: AHRR
  hgvsc: ENST00000512529.1:c.857C>T
  hgvsp: ENSP00000424880.1:p.Pro286Leu
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426932
  ensembl transcript: ENST00000506456
  gene symbol: AHRR
  hgvsc: ENST00000506456.1:c.887C>T
  hgvsp: ENSP00000426932.1:p.Pro296Leu
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424601
  ensembl transcript: ENST00000505113
  gene symbol: AHRR
  hgvsc: ENST00000505113.1:c.1319C>T
  hgvsp: ENSP00000424601.1:p.Pro440Leu
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000063438
  ensembl transcript: ENST00000507048
  gene symbol: AHRR
  hgvsc: ENST00000507048.1:n.1118C>T
  variant of: http://identifiers.org/hgnc/346
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2740
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4005
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2921
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19215
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 672
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27785
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2075
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 351
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 502
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4213
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 573
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1020
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1642
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 449
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1064
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 492
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Pro458Leu
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: Other
population: Latino
population: European (Non-Finnish)
population: African
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP

5-434169-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 434169
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 434169
    reference: chr 5
allele count: 115
allele frequency: 1.000260937635905e-3
allele num: 114970
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424601
  ensembl transcript: ENST00000505113
  gene symbol: AHRR
  hgvsc: ENST00000505113.1:c.1326G>A
  hgvsp: ENST00000505113.1:c.1326G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426076
  ensembl transcript: ENST00000511487
  gene symbol: AHRR
  hgvsc: ENST00000511487.1:c.291G>A
  hgvsp: ENST00000511487.1:c.291G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426932
  ensembl transcript: ENST00000506456
  gene symbol: AHRR
  hgvsc: ENST00000506456.1:c.894G>A
  hgvsp: ENST00000506456.1:c.894G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000323816
  ensembl transcript: ENST00000316418
  gene symbol: AHRR
  hgvsc: ENST00000316418.5:c.1380G>A
  hgvsp: ENST00000316418.5:c.1380G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424880
  ensembl transcript: ENST00000512529
  gene symbol: AHRR
  hgvsc: ENST00000512529.1:c.864G>A
  hgvsp: ENST00000512529.1:c.864G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000063438
  ensembl transcript: ENST00000507048
  gene symbol: AHRR
  hgvsc: ENST00000507048.1:n.1125G>A
  variant of: http://identifiers.org/hgnc/346
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 19539
  bin: 2.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 4.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 5.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1688
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 5.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 4.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2449
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2459
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 706
  bin: 3.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 489
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4127
  bin: 3.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 6.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 28434
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 6.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 546
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1253
  bin: 7.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 411
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 483
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6030
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 868
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 467
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 196
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41637
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Pro460Pro
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
reference allele: G
site quality: QD
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: ReadPosRankSum

5-434180-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 434180
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 434180
    reference: chr 5
allele count: 1
allele frequency: 8.617123948710878e-6
allele num: 116048
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000063438
  ensembl transcript: ENST00000507048
  gene symbol: AHRR
  hgvsc: ENST00000507048.1:n.1136G>A
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426932
  ensembl transcript: ENST00000506456
  gene symbol: AHRR
  hgvsc: ENST00000506456.1:c.905G>A
  hgvsp: ENSP00000426932.1:p.Gly302Asp
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426076
  ensembl transcript: ENST00000511487
  gene symbol: AHRR
  hgvsc: ENST00000511487.1:c.302G>A
  hgvsp: ENSP00000426076.1:p.Gly101Asp
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424880
  ensembl transcript: ENST00000512529
  gene symbol: AHRR
  hgvsc: ENST00000512529.1:c.875G>A
  hgvsp: ENSP00000424880.1:p.Gly292Asp
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424601
  ensembl transcript: ENST00000505113
  gene symbol: AHRR
  hgvsc: ENST00000505113.1:c.1337G>A
  hgvsp: ENSP00000424601.1:p.Gly446Asp
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000323816
  ensembl transcript: ENST00000316418
  gene symbol: AHRR
  hgvsc: ENST00000316418.5:c.1391G>A
  hgvsp: ENSP00000323816.5:p.Gly464Asp
  variant of: http://identifiers.org/hgnc/346
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 700
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1999
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19982
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1416
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29088
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 262
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2167
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4190
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 419
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1313
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 413
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 329
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42700
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3105
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 87
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6239
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 491
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 184
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Gly464Asp
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: Other
population: Latino
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum

5-434188-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 434188
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 434188
    reference: chr 5
allele count: 1
allele frequency: 8.588999209812073e-6
allele num: 116428
alternate allele: G
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000323816
  ensembl transcript: ENST00000316418
  gene symbol: AHRR
  hgvsc: ENST00000316418.5:c.1399A>G
  hgvsp: ENSP00000323816.5:p.Arg467Gly
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424880
  ensembl transcript: ENST00000512529
  gene symbol: AHRR
  hgvsc: ENST00000512529.1:c.883A>G
  hgvsp: ENSP00000424880.1:p.Arg295Gly
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000063438
  ensembl transcript: ENST00000507048
  gene symbol: AHRR
  hgvsc: ENST00000507048.1:n.1144A>G
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426932
  ensembl transcript: ENST00000506456
  gene symbol: AHRR
  hgvsc: ENST00000506456.1:c.913A>G
  hgvsp: ENSP00000426932.1:p.Arg305Gly
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424601
  ensembl transcript: ENST00000505113
  gene symbol: AHRR
  hgvsc: ENST00000505113.1:c.1345A>G
  hgvsp: ENSP00000424601.1:p.Arg449Gly
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426076
  ensembl transcript: ENST00000511487
  gene symbol: AHRR
  hgvsc: ENST00000511487.1:c.310A>G
  hgvsp: ENSP00000426076.1:p.Arg104Gly
  variant of: http://identifiers.org/hgnc/346
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4236
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2045
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29178
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20272
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1301
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 708
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1829
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 267
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 409
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 275
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43182
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 585
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6347
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2860
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 258
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Arg467Gly
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: Other
reference allele: A
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: MQRankSum

5-434195-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 434195
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 434195
    reference: chr 5
allele count: 2
allele frequency: 1.714589441558219e-5
allele num: 116646
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000323816
  ensembl transcript: ENST00000316418
  gene symbol: AHRR
  hgvsc: ENST00000316418.5:c.1406C>T
  hgvsp: ENSP00000323816.5:p.Ser469Leu
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424880
  ensembl transcript: ENST00000512529
  gene symbol: AHRR
  hgvsc: ENST00000512529.1:c.890C>T
  hgvsp: ENSP00000424880.1:p.Ser297Leu
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000063438
  ensembl transcript: ENST00000507048
  gene symbol: AHRR
  hgvsc: ENST00000507048.1:n.1151C>T
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424601
  ensembl transcript: ENST00000505113
  gene symbol: AHRR
  hgvsc: ENST00000505113.1:c.1352C>T
  hgvsp: ENSP00000424601.1:p.Ser451Leu
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426076
  ensembl transcript: ENST00000511487
  gene symbol: AHRR
  hgvsc: ENST00000511487.1:c.317C>T
  hgvsp: ENSP00000426076.1:p.Ser106Leu
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426932
  ensembl transcript: ENST00000506456
  gene symbol: AHRR
  hgvsc: ENST00000506456.1:c.920C>T
  hgvsp: ENSP00000426932.1:p.Ser307Leu
  variant of: http://identifiers.org/hgnc/346
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 731
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1469
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2019
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4295
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28966
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20351
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1739
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1366
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42765
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 469
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 401
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 352
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 441
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 492
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 267
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2771
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ser469Leu
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: Other
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum

5-434196-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 434196
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 434196
    reference: chr 5
allele count: 458
allele frequency: 3.932005494505494e-3
allele num: 116480
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000323816
  ensembl transcript: ENST00000316418
  gene symbol: AHRR
  hgvsc: ENST00000316418.5:c.1407G>A
  hgvsp: ENST00000316418.5:c.1407G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424880
  ensembl transcript: ENST00000512529
  gene symbol: AHRR
  hgvsc: ENST00000512529.1:c.891G>A
  hgvsp: ENST00000512529.1:c.891G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424601
  ensembl transcript: ENST00000505113
  gene symbol: AHRR
  hgvsc: ENST00000505113.1:c.1353G>A
  hgvsp: ENST00000505113.1:c.1353G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426932
  ensembl transcript: ENST00000506456
  gene symbol: AHRR
  hgvsc: ENST00000506456.1:c.921G>A
  hgvsp: ENST00000506456.1:c.921G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426076
  ensembl transcript: ENST00000511487
  gene symbol: AHRR
  hgvsc: ENST00000511487.1:c.318G>A
  hgvsp: ENST00000511487.1:c.318G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000063438
  ensembl transcript: ENST00000507048
  gene symbol: AHRR
  hgvsc: ENST00000507048.1:n.1152G>A
  variant of: http://identifiers.org/hgnc/346
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 13
genotype depth: GenotypeDepth
  all individuals: 20352
  bin: 2.75e1
  variant carriers: 56
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 4.25e1
  variant carriers: 55
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 4.75e1
  variant carriers: 56
genotype depth: GenotypeDepth
  all individuals: 776
  bin: 3.75e1
  variant carriers: 44
genotype depth: GenotypeDepth
  all individuals: 4354
  bin: 3.25e1
  variant carriers: 59
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 5.75e1
  variant carriers: 32
genotype depth: GenotypeDepth
  all individuals: 28690
  bin: 2.25e1
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1682
  bin: 7.5e0
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1503
  bin: 1.75e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 5.25e1
  variant carriers: 41
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 6.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 1995
  bin: 1.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 731
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 585
  bin: 8.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 42593
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 429
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6291
  bin: 6.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2638
  bin: 2.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 369
  bin: 5.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 478
  bin: 3.75e1
  variant carriers: 1
hgvs: p.Ser469Ser
num of homozygotes: 2
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: MQ

5-434196-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 434196
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 434196
    reference: chr 5
allele count: 1
allele frequency: 8.585164835164835e-6
allele num: 116480
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424880
  ensembl transcript: ENST00000512529
  gene symbol: AHRR
  hgvsc: ENST00000512529.1:c.891G>C
  hgvsp: ENST00000512529.1:c.891G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424601
  ensembl transcript: ENST00000505113
  gene symbol: AHRR
  hgvsc: ENST00000505113.1:c.1353G>C
  hgvsp: ENST00000505113.1:c.1353G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426076
  ensembl transcript: ENST00000511487
  gene symbol: AHRR
  hgvsc: ENST00000511487.1:c.318G>C
  hgvsp: ENST00000511487.1:c.318G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000063438
  ensembl transcript: ENST00000507048
  gene symbol: AHRR
  hgvsc: ENST00000507048.1:n.1152G>C
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426932
  ensembl transcript: ENST00000506456
  gene symbol: AHRR
  hgvsc: ENST00000506456.1:c.921G>C
  hgvsp: ENST00000506456.1:c.921G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000323816
  ensembl transcript: ENST00000316418
  gene symbol: AHRR
  hgvsc: ENST00000316418.5:c.1407G>C
  hgvsp: ENST00000316418.5:c.1407G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/346
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20352
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1503
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4354
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1682
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1995
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28690
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 776
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 706
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 478
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 181
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42593
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 429
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 369
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2638
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1753
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Ser469Ser
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
population: African
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD

5-434196-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 434196
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 434196
    reference: chr 5
allele count: 39
allele frequency: 3.348214285714286e-4
allele num: 116480
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000323816
  ensembl transcript: ENST00000316418
  gene symbol: AHRR
  hgvsc: ENST00000316418.5:c.1407G>T
  hgvsp: ENST00000316418.5:c.1407G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426076
  ensembl transcript: ENST00000511487
  gene symbol: AHRR
  hgvsc: ENST00000511487.1:c.318G>T
  hgvsp: ENST00000511487.1:c.318G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000063438
  ensembl transcript: ENST00000507048
  gene symbol: AHRR
  hgvsc: ENST00000507048.1:n.1152G>T
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426932
  ensembl transcript: ENST00000506456
  gene symbol: AHRR
  hgvsc: ENST00000506456.1:c.921G>T
  hgvsp: ENST00000506456.1:c.921G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424880
  ensembl transcript: ENST00000512529
  gene symbol: AHRR
  hgvsc: ENST00000512529.1:c.891G>T
  hgvsp: ENST00000512529.1:c.891G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424601
  ensembl transcript: ENST00000505113
  gene symbol: AHRR
  hgvsc: ENST00000505113.1:c.1353G>T
  hgvsp: ENST00000505113.1:c.1353G>T(p.%3D)
  variant of: http://identifiers.org/hgnc/346
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1503
  bin: 1.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1995
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20352
  bin: 2.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1682
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 404
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 28690
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 4.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 4354
  bin: 3.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 776
  bin: 3.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1330
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 731
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42593
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 289
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 369
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 706
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 478
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1753
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 139
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2638
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Ser469Ser
num of homozygotes: 0
population: European (Finnish)
population: Other
population: Latino
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD

5-434199-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 434199
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 434199
    reference: chr 5
allele count: 1
allele frequency: 8.558126797206627e-6
allele num: 116848
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424601
  ensembl transcript: ENST00000505113
  gene symbol: AHRR
  hgvsc: ENST00000505113.1:c.1356C>T
  hgvsp: ENST00000505113.1:c.1356C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426076
  ensembl transcript: ENST00000511487
  gene symbol: AHRR
  hgvsc: ENST00000511487.1:c.321C>T
  hgvsp: ENST00000511487.1:c.321C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424880
  ensembl transcript: ENST00000512529
  gene symbol: AHRR
  hgvsc: ENST00000512529.1:c.894C>T
  hgvsp: ENST00000512529.1:c.894C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000063438
  ensembl transcript: ENST00000507048
  gene symbol: AHRR
  hgvsc: ENST00000507048.1:n.1155C>T
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426932
  ensembl transcript: ENST00000506456
  gene symbol: AHRR
  hgvsc: ENST00000506456.1:c.924C>T
  hgvsp: ENST00000506456.1:c.924C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000323816
  ensembl transcript: ENST00000316418
  gene symbol: AHRR
  hgvsc: ENST00000316418.5:c.1410C>T
  hgvsp: ENST00000316418.5:c.1410C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/346
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4384
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28816
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1431
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1933
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 65
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1656
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20581
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 752
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2607
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6416
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 746
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43013
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 340
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 412
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 469
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 718
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Pro470Pro
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: MQRankSum

5-434202-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 434202
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 434202
    reference: chr 5
allele count: 2
allele frequency: 1.710776179152481e-5
allele num: 116906
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426932
  ensembl transcript: ENST00000506456
  gene symbol: AHRR
  hgvsc: ENST00000506456.1:c.927C>G
  hgvsp: ENSP00000426932.1:p.Ile309Met
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426076
  ensembl transcript: ENST00000511487
  gene symbol: AHRR
  hgvsc: ENST00000511487.1:c.324C>G
  hgvsp: ENSP00000426076.1:p.Ile108Met
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000323816
  ensembl transcript: ENST00000316418
  gene symbol: AHRR
  hgvsc: ENST00000316418.5:c.1413C>G
  hgvsp: ENSP00000323816.5:p.Ile471Met
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000063438
  ensembl transcript: ENST00000507048
  gene symbol: AHRR
  hgvsc: ENST00000507048.1:n.1158C>G
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424601
  ensembl transcript: ENST00000505113
  gene symbol: AHRR
  hgvsc: ENST00000505113.1:c.1359C>G
  hgvsp: ENSP00000424601.1:p.Ile453Met
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424880
  ensembl transcript: ENST00000512529
  gene symbol: AHRR
  hgvsc: ENST00000512529.1:c.897C>G
  hgvsp: ENSP00000424880.1:p.Ile299Met
  variant of: http://identifiers.org/hgnc/346
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1491
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28812
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1910
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20570
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4368
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1647
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 756
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42660
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1405
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 757
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 286
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 639
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 284
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 501
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Ile471Met
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: VQSLOD

5-434203-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 434203
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 434203
    reference: chr 5
allele count: 1
allele frequency: 8.557540905045526e-6
allele num: 116856
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424880
  ensembl transcript: ENST00000512529
  gene symbol: AHRR
  hgvsc: ENST00000512529.1:c.898T>C
  hgvsp: ENSP00000424880.1:p.Ser300Pro
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424601
  ensembl transcript: ENST00000505113
  gene symbol: AHRR
  hgvsc: ENST00000505113.1:c.1360T>C
  hgvsp: ENSP00000424601.1:p.Ser454Pro
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426076
  ensembl transcript: ENST00000511487
  gene symbol: AHRR
  hgvsc: ENST00000511487.1:c.325T>C
  hgvsp: ENSP00000426076.1:p.Ser109Pro
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000323816
  ensembl transcript: ENST00000316418
  gene symbol: AHRR
  hgvsc: ENST00000316418.5:c.1414T>C
  hgvsp: ENSP00000323816.5:p.Ser472Pro
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426932
  ensembl transcript: ENST00000506456
  gene symbol: AHRR
  hgvsc: ENST00000506456.1:c.928T>C
  hgvsp: ENSP00000426932.1:p.Ser310Pro
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000063438
  ensembl transcript: ENST00000507048
  gene symbol: AHRR
  hgvsc: ENST00000507048.1:n.1159T>C
  variant of: http://identifiers.org/hgnc/346
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28812
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 39
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4357
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1911
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1633
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1480
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 390
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20608
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 288
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 36
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 753
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 734
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 489
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1410
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 396
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 405
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 746
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 507
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 407
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ser472Pro
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum

http://identifiers.org/exac.variant/5-434207-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 434207
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 434207
    reference: chr 5
allele count: 105
allele frequency: 9.426001400434494e-4
allele num: 111394
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000323816
  ensembl transcript: ENST00000316418
  gene symbol: AHRR
  hgvsc: ENST00000316418.5:c.1418A>C
  hgvsp: ENSP00000323816.5:p.His473Pro
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000063438
  ensembl transcript: ENST00000507048
  gene symbol: AHRR
  hgvsc: ENST00000507048.1:n.1163A>C
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424880
  ensembl transcript: ENST00000512529
  gene symbol: AHRR
  hgvsc: ENST00000512529.1:c.902A>C
  hgvsp: ENSP00000424880.1:p.His301Pro
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426932
  ensembl transcript: ENST00000506456
  gene symbol: AHRR
  hgvsc: ENST00000506456.1:c.932A>C
  hgvsp: ENSP00000426932.1:p.His311Pro
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426076
  ensembl transcript: ENST00000511487
  gene symbol: AHRR
  hgvsc: ENST00000511487.1:c.329A>C
  hgvsp: ENSP00000426076.1:p.His110Pro
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424601
  ensembl transcript: ENST00000505113
  gene symbol: AHRR
  hgvsc: ENST00000505113.1:c.1364A>C
  hgvsp: ENSP00000424601.1:p.His455Pro
  variant of: http://identifiers.org/hgnc/346
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.95to100.00
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19254
  bin: 2.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 5.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 5065
  bin: 3.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25639
  bin: 2.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1863
  bin: 1.25e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 1494
  bin: 7.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 742
  bin: 4.75e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 1963
  bin: 1.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 1276
  bin: 4.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 5.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 20
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2077
  bin: 3.75e1
  variant carriers: 27
genotype quality: GenotypeQuality
  all individuals: 1659
  bin: 5.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 4681
  bin: 6.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1266
  bin: 4.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 758
  bin: 7.5e0
  variant carriers: 21
genotype quality: GenotypeQuality
  all individuals: 1240
  bin: 3.25e1
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 1130
  bin: 2.75e1
  variant carriers: 18
genotype quality: GenotypeQuality
  all individuals: 734
  bin: 1.75e1
  variant carriers: 19
genotype quality: GenotypeQuality
  all individuals: 1263
  bin: 3.75e1
  variant carriers: 15
genotype quality: GenotypeQuality
  all individuals: 598
  bin: 1.25e1
  variant carriers: 16
genotype quality: GenotypeQuality
  all individuals: 2392
  bin: 2.25e1
  variant carriers: 17
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 8.75e1
  variant carriers: 3
hgvs: p.His473Pro
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: FS
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: QD

5-434210-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 434210
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 434210
    reference: chr 5
allele count: 2
allele frequency: 1.700246535747683e-5
allele num: 117630
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000323816
  ensembl transcript: ENST00000316418
  gene symbol: AHRR
  hgvsc: ENST00000316418.5:c.1421C>T
  hgvsp: ENSP00000323816.5:p.Pro474Leu
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426076
  ensembl transcript: ENST00000511487
  gene symbol: AHRR
  hgvsc: ENST00000511487.1:c.332C>T
  hgvsp: ENSP00000426076.1:p.Pro111Leu
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000063438
  ensembl transcript: ENST00000507048
  gene symbol: AHRR
  hgvsc: ENST00000507048.1:n.1166C>T
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426932
  ensembl transcript: ENST00000506456
  gene symbol: AHRR
  hgvsc: ENST00000506456.1:c.935C>T
  hgvsp: ENSP00000426932.1:p.Pro312Leu
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424601
  ensembl transcript: ENST00000505113
  gene symbol: AHRR
  hgvsc: ENST00000505113.1:c.1367C>T
  hgvsp: ENSP00000424601.1:p.Pro456Leu
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424880
  ensembl transcript: ENST00000512529
  gene symbol: AHRR
  hgvsc: ENST00000512529.1:c.905C>T
  hgvsp: ENSP00000424880.1:p.Pro302Leu
  variant of: http://identifiers.org/hgnc/346
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5226
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 804
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 280
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 857
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23501
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26435
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1493
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1356
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 384
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 338
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1266
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 320
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Pro474Leu
num of homozygotes: 0
population: East Asian
population: African
population: European (Finnish)
population: Other
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: QD

5-434211-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 434211
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 434211
    reference: chr 5
allele count: 2
allele frequency: 1.699177598042548e-5
allele num: 117704
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424601
  ensembl transcript: ENST00000505113
  gene symbol: AHRR
  hgvsc: ENST00000505113.1:c.1368G>A
  hgvsp: ENST00000505113.1:c.1368G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424880
  ensembl transcript: ENST00000512529
  gene symbol: AHRR
  hgvsc: ENST00000512529.1:c.906G>A
  hgvsp: ENST00000512529.1:c.906G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426076
  ensembl transcript: ENST00000511487
  gene symbol: AHRR
  hgvsc: ENST00000511487.1:c.333G>A
  hgvsp: ENST00000511487.1:c.333G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000063438
  ensembl transcript: ENST00000507048
  gene symbol: AHRR
  hgvsc: ENST00000507048.1:n.1167G>A
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426932
  ensembl transcript: ENST00000506456
  gene symbol: AHRR
  hgvsc: ENST00000506456.1:c.936G>A
  hgvsp: ENST00000506456.1:c.936G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000323816
  ensembl transcript: ENST00000316418
  gene symbol: AHRR
  hgvsc: ENST00000316418.5:c.1422G>A
  hgvsp: ENST00000316418.5:c.1422G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/346
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26516
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5234
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23576
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1432
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 785
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 333
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1346
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 802
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 81
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 507
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 379
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 530
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45200
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6822
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 186
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 57
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 292
  bin: 3.75e1
  variant carriers: 0
hgvs: p.Pro474Pro
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: DP

5-434212-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 434212
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 434212
    reference: chr 5
allele count: 5
allele frequency: 4.248088360237893e-5
allele num: 117700
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000063438
  ensembl transcript: ENST00000507048
  gene symbol: AHRR
  hgvsc: ENST00000507048.1:n.1168C>T
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000323816
  ensembl transcript: ENST00000316418
  gene symbol: AHRR
  hgvsc: ENST00000316418.5:c.1423C>T
  hgvsp: ENSP00000323816.5:p.Pro475Ser
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426932
  ensembl transcript: ENST00000506456
  gene symbol: AHRR
  hgvsc: ENST00000506456.1:c.937C>T
  hgvsp: ENSP00000426932.1:p.Pro313Ser
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426076
  ensembl transcript: ENST00000511487
  gene symbol: AHRR
  hgvsc: ENST00000511487.1:c.334C>T
  hgvsp: ENSP00000426076.1:p.Pro112Ser
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424601
  ensembl transcript: ENST00000505113
  gene symbol: AHRR
  hgvsc: ENST00000505113.1:c.1369C>T
  hgvsp: ENSP00000424601.1:p.Pro457Ser
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424880
  ensembl transcript: ENST00000512529
  gene symbol: AHRR
  hgvsc: ENST00000512529.1:c.907C>T
  hgvsp: ENSP00000424880.1:p.Pro303Ser
  variant of: http://identifiers.org/hgnc/346
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1357
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 23583
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1443
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 773
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5210
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26531
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6835
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 332
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 305
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 532
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 141
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 134
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 498
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Pro475Ser
num of homozygotes: 0
population: East Asian
population: Other
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
reference allele: C
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQ

5-434213-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 434213
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 434213
    reference: chr 5
allele count: 1
allele frequency: 8.496754239880366e-6
allele num: 117692
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424601
  ensembl transcript: ENST00000505113
  gene symbol: AHRR
  hgvsc: ENST00000505113.1:c.1370C>T
  hgvsp: ENSP00000424601.1:p.Pro457Leu
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000323816
  ensembl transcript: ENST00000316418
  gene symbol: AHRR
  hgvsc: ENST00000316418.5:c.1424C>T
  hgvsp: ENSP00000323816.5:p.Pro475Leu
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426076
  ensembl transcript: ENST00000511487
  gene symbol: AHRR
  hgvsc: ENST00000511487.1:c.335C>T
  hgvsp: ENSP00000426076.1:p.Pro112Leu
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424880
  ensembl transcript: ENST00000512529
  gene symbol: AHRR
  hgvsc: ENST00000512529.1:c.908C>T
  hgvsp: ENSP00000424880.1:p.Pro303Leu
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426932
  ensembl transcript: ENST00000506456
  gene symbol: AHRR
  hgvsc: ENST00000506456.1:c.938C>T
  hgvsp: ENSP00000426932.1:p.Pro313Leu
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000063438
  ensembl transcript: ENST00000507048
  gene symbol: AHRR
  hgvsc: ENST00000507048.1:n.1169C>T
  variant of: http://identifiers.org/hgnc/346
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23597
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26584
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 284
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 67
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1406
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1346
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5217
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 749
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1758
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 481
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 377
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 335
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 530
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45221
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 164
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1271
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Pro475Leu
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: C
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff

5-434214-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 434214
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 434214
    reference: chr 5
allele count: 2
allele frequency: 1.698196515300751e-5
allele num: 117772
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426076
  ensembl transcript: ENST00000511487
  gene symbol: AHRR
  hgvsc: ENST00000511487.1:c.336G>A
  hgvsp: ENST00000511487.1:c.336G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000323816
  ensembl transcript: ENST00000316418
  gene symbol: AHRR
  hgvsc: ENST00000316418.5:c.1425G>A
  hgvsp: ENST00000316418.5:c.1425G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000063438
  ensembl transcript: ENST00000507048
  gene symbol: AHRR
  hgvsc: ENST00000507048.1:n.1170G>A
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426932
  ensembl transcript: ENST00000506456
  gene symbol: AHRR
  hgvsc: ENST00000506456.1:c.939G>A
  hgvsp: ENST00000506456.1:c.939G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424601
  ensembl transcript: ENST00000505113
  gene symbol: AHRR
  hgvsc: ENST00000505113.1:c.1371G>A
  hgvsp: ENST00000505113.1:c.1371G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424880
  ensembl transcript: ENST00000512529
  gene symbol: AHRR
  hgvsc: ENST00000512529.1:c.909G>A
  hgvsp: ENST00000512529.1:c.909G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/346
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26653
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23675
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5217
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1340
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1351
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 333
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 459
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1760
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6834
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 428
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45481
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 527
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Pro475Pro
num of homozygotes: 0
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: East Asian
reference allele: G
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ

5-434214-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 434214
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 434214
    reference: chr 5
allele count: 1
allele frequency: 8.490982576503753e-6
allele num: 117772
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424880
  ensembl transcript: ENST00000512529
  gene symbol: AHRR
  hgvsc: ENST00000512529.1:c.909G>C
  hgvsp: ENST00000512529.1:c.909G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426076
  ensembl transcript: ENST00000511487
  gene symbol: AHRR
  hgvsc: ENST00000511487.1:c.336G>C
  hgvsp: ENST00000511487.1:c.336G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426932
  ensembl transcript: ENST00000506456
  gene symbol: AHRR
  hgvsc: ENST00000506456.1:c.939G>C
  hgvsp: ENST00000506456.1:c.939G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000323816
  ensembl transcript: ENST00000316418
  gene symbol: AHRR
  hgvsc: ENST00000316418.5:c.1425G>C
  hgvsp: ENST00000316418.5:c.1425G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424601
  ensembl transcript: ENST00000505113
  gene symbol: AHRR
  hgvsc: ENST00000505113.1:c.1371G>C
  hgvsp: ENST00000505113.1:c.1371G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000063438
  ensembl transcript: ENST00000507048
  gene symbol: AHRR
  hgvsc: ENST00000507048.1:n.1170G>C
  variant of: http://identifiers.org/hgnc/346
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 330
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1340
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23675
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 792
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5217
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 68
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1351
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26653
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 679
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 28
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 98
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1760
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 333
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 261
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 459
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1988
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6834
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 428
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Pro475Pro
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: European (Finnish)
reference allele: G
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum

5-434219-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 434219
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 434219
    reference: chr 5
allele count: 1
allele frequency: 8.487667419239845e-6
allele num: 117818
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426076
  ensembl transcript: ENST00000511487
  gene symbol: AHRR
  hgvsc: ENST00000511487.1:c.341C>G
  hgvsp: ENSP00000426076.1:p.Pro114Arg
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000323816
  ensembl transcript: ENST00000316418
  gene symbol: AHRR
  hgvsc: ENST00000316418.5:c.1430C>G
  hgvsp: ENSP00000323816.5:p.Pro477Arg
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424601
  ensembl transcript: ENST00000505113
  gene symbol: AHRR
  hgvsc: ENST00000505113.1:c.1376C>G
  hgvsp: ENSP00000424601.1:p.Pro459Arg
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426932
  ensembl transcript: ENST00000506456
  gene symbol: AHRR
  hgvsc: ENST00000506456.1:c.944C>G
  hgvsp: ENSP00000426932.1:p.Pro315Arg
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000063438
  ensembl transcript: ENST00000507048
  gene symbol: AHRR
  hgvsc: ENST00000507048.1:n.1175C>G
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424880
  ensembl transcript: ENST00000512529
  gene symbol: AHRR
  hgvsc: ENST00000512529.1:c.914C>G
  hgvsp: ENSP00000424880.1:p.Pro305Arg
  variant of: http://identifiers.org/hgnc/346
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23703
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 802
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1322
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5214
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1340
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26663
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 515
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1247
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6829
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1985
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 110
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 319
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 438
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Pro477Arg
num of homozygotes: 0
population: East Asian
population: Latino
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: DP

5-434219-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 434219
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 434219
    reference: chr 5
allele count: 66
allele frequency: 5.601860496698297e-4
allele num: 117818
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000323816
  ensembl transcript: ENST00000316418
  gene symbol: AHRR
  hgvsc: ENST00000316418.5:c.1430C>T
  hgvsp: ENSP00000323816.5:p.Pro477Leu
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000063438
  ensembl transcript: ENST00000507048
  gene symbol: AHRR
  hgvsc: ENST00000507048.1:n.1175C>T
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426076
  ensembl transcript: ENST00000511487
  gene symbol: AHRR
  hgvsc: ENST00000511487.1:c.341C>T
  hgvsp: ENSP00000426076.1:p.Pro114Leu
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426932
  ensembl transcript: ENST00000506456
  gene symbol: AHRR
  hgvsc: ENST00000506456.1:c.944C>T
  hgvsp: ENSP00000426932.1:p.Pro315Leu
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424880
  ensembl transcript: ENST00000512529
  gene symbol: AHRR
  hgvsc: ENST00000512529.1:c.914C>T
  hgvsp: ENSP00000424880.1:p.Pro305Leu
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424601
  ensembl transcript: ENST00000505113
  gene symbol: AHRR
  hgvsc: ENST00000505113.1:c.1376C>T
  hgvsp: ENSP00000424601.1:p.Pro459Leu
  variant of: http://identifiers.org/hgnc/346
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 4.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 802
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1340
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 6.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 7
  bin: 8.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 5214
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1322
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18
  bin: 6.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 9.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 26663
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 34
  bin: 5.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 1
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 5.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 8
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 23703
  bin: 2.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 6829
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 137
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 438
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 417
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 427
  bin: 9.75e1
  variant carriers: 65
genotype quality: GenotypeQuality
  all individuals: 1985
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 515
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Pro477Leu
num of homozygotes: 1
population: African
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD

5-434220-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 434220
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 434220
    reference: chr 5
allele count: 3
allele frequency: 2.545954478333927e-5
allele num: 117834
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426932
  ensembl transcript: ENST00000506456
  gene symbol: AHRR
  hgvsc: ENST00000506456.1:c.945G>A
  hgvsp: ENST00000506456.1:c.945G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424601
  ensembl transcript: ENST00000505113
  gene symbol: AHRR
  hgvsc: ENST00000505113.1:c.1377G>A
  hgvsp: ENST00000505113.1:c.1377G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000063438
  ensembl transcript: ENST00000507048
  gene symbol: AHRR
  hgvsc: ENST00000507048.1:n.1176G>A
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424880
  ensembl transcript: ENST00000512529
  gene symbol: AHRR
  hgvsc: ENST00000512529.1:c.915G>A
  hgvsp: ENST00000512529.1:c.915G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426076
  ensembl transcript: ENST00000511487
  gene symbol: AHRR
  hgvsc: ENST00000511487.1:c.342G>A
  hgvsp: ENST00000511487.1:c.342G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000323816
  ensembl transcript: ENST00000316418
  gene symbol: AHRR
  hgvsc: ENST00000316418.5:c.1431G>A
  hgvsp: ENST00000316418.5:c.1431G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/346
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1345
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26664
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1334
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5219
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 622
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23768
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45531
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 364
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 426
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 419
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 256
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 157
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1749
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 513
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Pro477Pro
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: Other
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum

5-434226-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 434226
    reference: chr 5
  end: Position
    type: ExactPosition
    position: 434226
    reference: chr 5
allele count: 1
allele frequency: 8.485506754463376e-6
allele num: 117848
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426076
  ensembl transcript: ENST00000511487
  gene symbol: AHRR
  hgvsc: ENST00000511487.1:c.348C>T
  hgvsp: ENST00000511487.1:c.348C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424880
  ensembl transcript: ENST00000512529
  gene symbol: AHRR
  hgvsc: ENST00000512529.1:c.921C>T
  hgvsp: ENST00000512529.1:c.921C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000323816
  ensembl transcript: ENST00000316418
  gene symbol: AHRR
  hgvsc: ENST00000316418.5:c.1437C>T
  hgvsp: ENST00000316418.5:c.1437C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000424601
  ensembl transcript: ENST00000505113
  gene symbol: AHRR
  hgvsc: ENST00000505113.1:c.1383C>T
  hgvsp: ENST00000505113.1:c.1383C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000063438
  ensembl protein: ENSP00000426932
  ensembl transcript: ENST00000506456
  gene symbol: AHRR
  hgvsc: ENST00000506456.1:c.951C>T
  hgvsp: ENST00000506456.1:c.951C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/346
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000063438
  ensembl transcript: ENST00000507048
  gene symbol: AHRR
  hgvsc: ENST00000507048.1:n.1182C>T
  variant of: http://identifiers.org/hgnc/346
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 23780
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1321
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26732
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 0
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 64
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 788
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5189
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1364
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 126
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 269
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Pro479Pro
num of homozygotes: 0
reference allele: C

GenotypeQuality
all individuals: 612
bin: 9.75e1
variant carriers: 9

GenotypeQuality
all individuals: 223
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1862
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6104
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2827
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2052
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 231
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5932
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4032
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5766
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.538234626730202e-5
allele num: 44070
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7718
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 524
num of homozygotes: 0

South Asian
type: Population
allele count: 9
allele frequency: 1.181102362204724e-3
allele num: 7620
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 7.59234e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.05e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.27e-1

QD
type: SiteQuality
SIO_000300: 8.74e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.44e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -1.663e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.97e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.31e-1

GenotypeQuality
all individuals: 398
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 227
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1530
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 397
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 149
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8225
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4016
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5816
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 538
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.097694840834248e-4
allele num: 9110
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 47706
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6678
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3882
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6496
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.22e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.324e0

DP
type: SiteQuality
SIO_000300: 8.2843e5

BaseQRankSum
type: SiteQuality
SIO_000300: -3.366e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -1.096e0

FS
type: SiteQuality
SIO_000300: 3.31e0

QD
type: SiteQuality
SIO_000300: 8.73e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-3

VQSLOD
type: SiteQuality
SIO_000300: -3.58e-1

GenotypeQuality
all individuals: 1198
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 407
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2855
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 404
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 153
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1334
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 234
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6524
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5846
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9134
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 6.260695354564047e-5
allele num: 47918
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3906
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 542
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6714
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.27e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.6e-3

FS
type: SiteQuality
SIO_000300: 1.62e0

QD
type: SiteQuality
SIO_000300: 1.607e1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.65e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.54e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.94e-1

DP
type: SiteQuality
SIO_000300: 8.373e5

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.67e-1

GenotypeQuality
all individuals: 688
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1657
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4868
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 160
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1535
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 474
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5456
bin: 3.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 48758
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6822
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 3992
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 548
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.49655791679138e-4
allele num: 6682
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9272
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5954
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 8.95854e5

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.099999999999999e-2

QD
type: SiteQuality
SIO_000300: 8.52e0

FS
type: SiteQuality
SIO_000300: 1.173e0

MQRankSum
type: SiteQuality
SIO_000300: -1.43e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -9.19e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.4e-3

VQSLOD
type: SiteQuality
SIO_000300: 1.02e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.100000000000001e-1

GenotypeQuality
all individuals: 130
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6944
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1362
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 555
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 519
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 286
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4663
bin: 2.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4028
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9340
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 556
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6028
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.485001485001485e-4
allele num: 6734
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 49280
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6872
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 9.2053e5

VQSLOD
type: SiteQuality
SIO_000300: 1.23e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.4e-3

MQRankSum
type: SiteQuality
SIO_000300: -5.0e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.51e-1

FS
type: SiteQuality
SIO_000300: 1.016e0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.52e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.51e-1

QD
type: SiteQuality
SIO_000300: 8.970000000000001e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 169
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 324
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 144
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3888
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6154
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 577
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 748
bin: 5.25e1
variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6830
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6138
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 6.006246496356211e-5
allele num: 49948
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 560
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6958
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4084
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9430
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.6e-2

QD
type: SiteQuality
SIO_000300: 9.44e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 8.6e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.36e-1

DP
type: SiteQuality
SIO_000300: 9.54734e5

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.36e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.1e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.8e-3

GenotypeQuality
all individuals: 434
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 467
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1942
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1105
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3664
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 328
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5951
bin: 3.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6834
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4074
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6950
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9464
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 50052
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6146
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 560
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.21e-1

DP
type: SiteQuality
SIO_000300: 9.63609e5

QD
type: SiteQuality
SIO_000300: 1.944e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.85e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.5e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.422e0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -3.283e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -4.04e-1

GenotypeQuality
all individuals: 4027
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11945
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5601
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 921
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1062
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 643
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2107
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4126
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 50512
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9526
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.602564102564103e-4
allele num: 6240
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6870
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7016
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 562
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.48e0

MQRankSum
type: SiteQuality
SIO_000300: 9.76e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.26e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.2e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -1.07e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.51e-1

QD
type: SiteQuality
SIO_000300: 3.481e1

DP
type: SiteQuality
SIO_000300: 9.80083e5

GenotypeQuality
all individuals: 2231
bin: 3.25e1
variant carriers: 796

GenotypeQuality
all individuals: 1474
bin: 4.75e1
variant carriers: 1048

GenotypeQuality
all individuals: 10161
bin: 6.25e1
variant carriers: 873

GenotypeQuality
all individuals: 603
bin: 7.25e1
variant carriers: 373

GenotypeQuality
all individuals: 3448
bin: 2.25e1
variant carriers: 530

GenotypeQuality
all individuals: 1565
bin: 6.75e1
variant carriers: 707

GenotypeQuality
all individuals: 765
bin: 7.75e1
variant carriers: 596

European (Non-Finnish)
type: Population
allele count: 23756
allele frequency: 4.128893214682981e-1
allele num: 57536
num of homozygotes: 4613

Latino
type: Population
allele count: 2479
allele frequency: 2.401666343731835e-1
allele num: 10322
num of homozygotes: 261

European (Finnish)
type: Population
allele count: 2286
allele frequency: 4.54653937947494e-1
allele num: 5028
num of homozygotes: 481

African
type: Population
allele count: 5349
allele frequency: 6.301837888784166e-1
allele num: 8488
num of homozygotes: 1637

South Asian
type: Population
allele count: 3554
allele frequency: 4.60720767435831e-1
allele num: 7714
num of homozygotes: 777

Other
type: Population
allele count: 302
allele frequency: 4.646153846153846e-1
allele num: 650
num of homozygotes: 71

East Asian
type: Population
allele count: 2717
allele frequency: 3.517607457276023e-1
allele num: 7724
num of homozygotes: 444

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.43e-2

QD
type: SiteQuality
SIO_000300: 1.813e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.22e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.7e-2

VQSLOD
type: SiteQuality
SIO_000300: 3.51e0

DP
type: SiteQuality
SIO_000300: 1.192136e6

FS
type: SiteQuality
SIO_000300: 2.005e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.98e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.71e-1

GenotypeQuality
all individuals: 3671
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3386
bin: 4.75e1
variant carriers: 3

GenotypeQuality
all individuals: 169
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 397
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1794
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1301
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 976
bin: 7.75e1
variant carriers: 2

Latino
type: Population
allele count: 10
allele frequency: 9.498480243161094e-4
allele num: 10528
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5134
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8006
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.54320987654321e-3
allele num: 648
num of homozygotes: 0

African
type: Population
allele count: 206
allele frequency: 2.40149218932152e-2
allele num: 8578
num of homozygotes: 7

South Asian
type: Population
allele count: 1
allele frequency: 1.289656951250967e-4
allele num: 7754
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 5.09683995922528e-5
allele num: 58860
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.09449e6

MQRankSum
type: SiteQuality
SIO_000300: 2.31e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.53e-1

QD
type: SiteQuality
SIO_000300: 1.402e1

FS
type: SiteQuality
SIO_000300: 5.78e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.49e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.09e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.66e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -6.43e-1

GenotypeQuality
all individuals: 1794
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 194
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3920
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 482
bin: 8.25e1
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GenotypeQuality
all individuals: 3808
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3386
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 670
bin: 9.75e1
variant carriers: 2

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7754
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.899696048632219e-4
allele num: 10528
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8578
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8006
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 58860
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 648
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5134
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.78e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.66e-2

VQSLOD
type: SiteQuality
SIO_000300: 4.49e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.43e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.09e-1

QD
type: SiteQuality
SIO_000300: 1.402e1

DP
type: SiteQuality
SIO_000300: 1.09449e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.53e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.31e-1

GenotypeQuality
all individuals: 464
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21412
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2620
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3624
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1123
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 954
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 188
bin: 8.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10580
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.695260052892114e-5
allele num: 58988
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8596
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5132
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.284356537374775e-4
allele num: 7786
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 656
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8030
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.73e-1

QD
type: SiteQuality
SIO_000300: 8.279999999999999e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.8e-3

DP
type: SiteQuality
SIO_000300: 1.098844e6

VQSLOD
type: SiteQuality
SIO_000300: 9.11e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.12e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.73e-1

FS
type: SiteQuality
SIO_000300: 2.706e0

MQRankSum
type: SiteQuality
SIO_000300: 6.32e-1

GenotypeQuality
all individuals: 1937
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1124
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 491
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3649
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 155
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3899
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2997
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2503
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 924
bin: 7.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10626
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.163061177017911e-4
allele num: 8598
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8054
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5152
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 59188
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 660
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7820
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.113198e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.3e-3

VQSLOD
type: SiteQuality
SIO_000300: 2.9e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.2e0

MQRankSum
type: SiteQuality
SIO_000300: 1.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.77e-1

FS
type: SiteQuality
SIO_000300: 3.626e0

QD
type: SiteQuality
SIO_000300: 9.32e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.05e0

GenotypeQuality
all individuals: 3969
bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 2.5e0
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 3

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24791
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GenotypeQuality
all individuals: 1670
bin: 4.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 662
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5184
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7864
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8086
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10652
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 5.055441340028985e-5
allele num: 59342
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.67e-1

FS
type: SiteQuality
SIO_000300: 9.805999999999999e0

MQRankSum
type: SiteQuality
SIO_000300: 1.35e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.33e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.612e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.98e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.534e1

DP
type: SiteQuality
SIO_000300: 1.115938e6

GenotypeQuality
all individuals: 2440
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 925
bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3972
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 533
bin: 5.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10658
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8630
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 660
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5166
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.68554476806904e-5
allele num: 59328
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8072
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7874
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.346e1

MQRankSum
type: SiteQuality
SIO_000300: -3.65e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.73e0

FS
type: SiteQuality
SIO_000300: 6.412e0

MQ
type: SiteQuality
SIO_000300: 5.808e1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.65e-1

DP
type: SiteQuality
SIO_000300: 1.120491e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.18e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.4e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.383e0

GenotypeQuality
all individuals: 3347
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5578
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 27012
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variant carriers: 0

GenotypeQuality
all individuals: 2318
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1994
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variant carriers: 0

GenotypeQuality
all individuals: 1399
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 149
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 174
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1160
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 438
bin: 8.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10708
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 670
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5224
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8124
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8674
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7958
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.356155188615922e-5
allele num: 59592
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 6.42e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.07e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.67e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.04e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.4e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.143135e6

BaseQRankSum
type: SiteQuality
SIO_000300: -5.46e-1

QD
type: SiteQuality
SIO_000300: 7.4e0

GenotypeQuality
all individuals: 28709
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2745
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1505
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 456
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 895
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variant carriers: 0

GenotypeQuality
all individuals: 880
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variant carriers: 0

GenotypeQuality
all individuals: 4227
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variant carriers: 0

GenotypeQuality
all individuals: 1210
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 448
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8680
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7998
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5280
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8162
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10722
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 676
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 5.012531328320802e-5
allele num: 59850
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -7.83e-1

VQSLOD
type: SiteQuality
SIO_000300: -2.215e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.21e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.83e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.3e-3

QD
type: SiteQuality
SIO_000300: 8.960000000000001e0

FS
type: SiteQuality
SIO_000300: 4.588e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.09e-1

MQ
type: SiteQuality
SIO_000300: 5.836e1

DP
type: SiteQuality
SIO_000300: 1.160122e6

GenotypeQuality
all individuals: 2040
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1482
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1646
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 453
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 503
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variant carriers: 0

GenotypeQuality
all individuals: 1003
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4684
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variant carriers: 0

GenotypeQuality
all individuals: 1254
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 148
bin: 9.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.640581422055977e-5
allele num: 60954
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.12410071942446e-4
allele num: 8896
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5426
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8270
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 692
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10966
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8240
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.4e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 4.546e0

DP
type: SiteQuality
SIO_000300: 1.228419e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.58e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.92e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.135e0

MQRankSum
type: SiteQuality
SIO_000300: 2.31e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.12e-1

QD
type: SiteQuality
SIO_000300: 1.225e1

GenotypeQuality
all individuals: 961
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4707
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 230
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variant carriers: 0

GenotypeQuality
all individuals: 341
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variant carriers: 0

GenotypeQuality
all individuals: 653
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variant carriers: 0

GenotypeQuality
all individuals: 450
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variant carriers: 1

GenotypeQuality
all individuals: 172
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variant carriers: 0

GenotypeQuality
all individuals: 455
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variant carriers: 0

GenotypeQuality
all individuals: 1269
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8288
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 9.102494083378845e-5
allele num: 10986
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8264
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8898
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5430
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 692
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 61042
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.844e0

QD
type: SiteQuality
SIO_000300: 1.486e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.120000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: 6.59e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.56e0

MQ
type: SiteQuality
SIO_000300: 5.899e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.1e-3

VQSLOD
type: SiteQuality
SIO_000300: -6.716e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.06e0

DP
type: SiteQuality
SIO_000300: 1.235077e6

GenotypeQuality
all individuals: 485
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 172
bin: 8.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 456
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variant carriers: 0

GenotypeQuality
all individuals: 450
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.636179194345365e-5
allele num: 61118
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 688
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8918
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8292
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5444
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11018
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8298
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.158e1

MQRankSum
type: SiteQuality
SIO_000300: -6.62e-1

MQ
type: SiteQuality
SIO_000300: 5.953e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.83e-1

DP
type: SiteQuality
SIO_000300: 1.240094e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.56e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.7e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 3.8e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 3.94e-1

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 178
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 1078
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GenotypeQuality
all individuals: 576
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variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5598
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 706
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11140
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.619957881095092e-5
allele num: 61730
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9096
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8490
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8362
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.9e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.4e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.412e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.792e0

MQRankSum
type: SiteQuality
SIO_000300: 1.19e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.169e0

DP
type: SiteQuality
SIO_000300: 1.280152e6

FS
type: SiteQuality
SIO_000300: 4.178e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.15e-1

GenotypeQuality
all individuals: 1045
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 237
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 224
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 253
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GenotypeQuality
all individuals: 590
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GenotypeQuality
all individuals: 182
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GenotypeQuality
all individuals: 1082
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variant carriers: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.585943103036098e-4
allele num: 8366
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 710
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.954154727793696e-5
allele num: 11168
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8556
num of homozygotes: 0

African
type: Population
allele count: 14
allele frequency: 1.533070521243977e-3
allele num: 9132
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.616448984870038e-5
allele num: 61864
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5614
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.29154e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.4e-3

MQRankSum
type: SiteQuality
SIO_000300: 4.19e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.17e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.85e-1

QD
type: SiteQuality
SIO_000300: 1.232e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.23e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.07e0

GenotypeQuality
all individuals: 229
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 312
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3337
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 560
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 452
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5388
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38161
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1095
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 155
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8372
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5664
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11182
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 710
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.612851198348441e-5
allele num: 62002
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9146
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8580
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.018e0

QD
type: SiteQuality
SIO_000300: 8.51e0

DP
type: SiteQuality
SIO_000300: 1.298293e6

VQSLOD
type: SiteQuality
SIO_000300: 1.02e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.14e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.5e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.46e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.03e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.217e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 241
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3746
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 183
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 634
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 880
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3188
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 37162
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 798
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5364
bin: 6.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 710
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.612851198348441e-5
allele num: 62002
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9136
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5650
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11186
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8602
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8380
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.12e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.52e-1

MQRankSum
type: SiteQuality
SIO_000300: -2.52e-1

QD
type: SiteQuality
SIO_000300: 7.63e0

FS
type: SiteQuality
SIO_000300: 3.018e0

MQ
type: SiteQuality
SIO_000300: 5.948e1

VQSLOD
type: SiteQuality
SIO_000300: -8.92e-2

DP
type: SiteQuality
SIO_000300: 1.298756e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.9e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.2e-1

GenotypeQuality
all individuals: 155
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1142
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3769
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 520
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 360
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5517
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 453
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 837
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 644
bin: 3.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8682
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9180
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 716
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8402
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.914244963451596e-5
allele num: 11218
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5706
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62186
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.310333e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.1e-1

MQRankSum
type: SiteQuality
SIO_000300: -8.4e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.67e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.8e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 1.62e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.39e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.83e-1

GenotypeQuality
all individuals: 609
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 346
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 188
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 479
bin: 9.75e1
variant carriers: 28

GenotypeQuality
all individuals: 277
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 402
bin: 5.25e1
variant carriers: 1

GenotypeQuality
all individuals: 5700
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 537
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 157
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5774
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8420
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62384
num of homozygotes: 0

South Asian
type: Population
allele count: 28
allele frequency: 3.189792663476874e-3
allele num: 8778
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9232
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11272
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 720
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.3e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.24e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.1e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.96e-1

DP
type: SiteQuality
SIO_000300: 1.326803e6

FS
type: SiteQuality
SIO_000300: 1.745e0

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 2.9e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.32e1

GenotypeQuality
all individuals: 40244
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 245
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 565
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 157
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 193
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 549
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 454
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 317
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 307
bin: 4.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62442
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8796
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 722
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8424
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.858965272856131e-5
allele num: 11288
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5786
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9236
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.329437e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.74e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.43e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 1.96e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.1e-3

QD
type: SiteQuality
SIO_000300: 1.502e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.65e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.291e0

GenotypeQuality
all individuals: 40558
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 442
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 290
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 157
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2887
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 456
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 166
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 491
bin: 2.75e1
variant carriers: 1

GenotypeQuality
all individuals: 261
bin: 4.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8846
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62482
num of homozygotes: 0

African
type: Population
allele count: 5
allele frequency: 5.40423692174665e-4
allele num: 9252
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5802
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8428
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11308
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 724
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.7e-3

QD
type: SiteQuality
SIO_000300: 1.062e1

FS
type: SiteQuality
SIO_000300: 5.548e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.1e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.63e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.51e-1

DP
type: SiteQuality
SIO_000300: 1.335893e6

MQ
type: SiteQuality
SIO_000300: 5.942e1

MQRankSum
type: SiteQuality
SIO_000300: -1.04e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.09e0

GenotypeQuality
all individuals: 281
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40510
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 159
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5859
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 393
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 270
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 188
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1231
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 455
bin: 9.75e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8882
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 726
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8430
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.838607035531201e-5
allele num: 11314
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5836
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9268
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62502
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.285e1

FS
type: SiteQuality
SIO_000300: 3.784e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.11e0

VQSLOD
type: SiteQuality
SIO_000300: -2.741e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.22e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-3

MQRankSum
type: SiteQuality
SIO_000300: -8.79e-1

DP
type: SiteQuality
SIO_000300: 1.340849e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.73e-1

MQ
type: SiteQuality
SIO_000300: 5.917e1

GenotypeQuality
all individuals: 457
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 164
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 336
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 573
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 227
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 292
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 319
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41066
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1632
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5882
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9296
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 728
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11330
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.597444089456869e-5
allele num: 62600
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8442
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8962
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.348462e6

ClippingRankSum
type: SiteQuality
SIO_000300: -3.76e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.1e-1

FS
type: SiteQuality
SIO_000300: 1.075e0

MQRankSum
type: SiteQuality
SIO_000300: 3.76e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.4e-1

QD
type: SiteQuality
SIO_000300: 1.086e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.5e-3

MQ
type: SiteQuality
SIO_000300: 5.928e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.09e-1

GenotypeQuality
all individuals: 280
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 229
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 305
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 393
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 495
bin: 9.75e1
variant carriers: 41

GenotypeQuality
all individuals: 1614
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 40892
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2994
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 566
bin: 8.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 37
allele frequency: 5.913188007415457e-4
allele num: 62572
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 2
allele frequency: 3.401360544217687e-4
allele num: 5880
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.115075825156111e-4
allele num: 8968
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 726
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9296
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8442
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.824567596187787e-5
allele num: 11332
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.5e-1

FS
type: SiteQuality
SIO_000300: 5.2e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.81e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.75e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.94e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.09e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.3e-3

MQ
type: SiteQuality
SIO_000300: 5.943e1

QD
type: SiteQuality
SIO_000300: 1.057e1

DP
type: SiteQuality
SIO_000300: 1.352264e6

GenotypeQuality
all individuals: 5944
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3106
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 323
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 161
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 570
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 41189
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 237
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1625
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.597495127639861e-5
allele num: 62598
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11344
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8990
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5892
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8434
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9304
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 728
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.95e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.478e0

FS
type: SiteQuality
SIO_000300: 6.073e0

MQRankSum
type: SiteQuality
SIO_000300: -2.17e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.61e-1

MQ
type: SiteQuality
SIO_000300: 5.899e1

VQSLOD
type: SiteQuality
SIO_000300: 4.26e-1

QD
type: SiteQuality
SIO_000300: 1.253e1

DP
type: SiteQuality
SIO_000300: 1.353013e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.1e-3

GenotypeQuality
all individuals: 291
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 181
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 210
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 192
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 459
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 5992
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 155
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 191
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62660
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9012
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11350
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5914
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8448
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 3.218884120171674e-4
allele num: 9320
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 730
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.2e-3

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.354254e6

VQSLOD
type: SiteQuality
SIO_000300: 1.33e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.71e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.25e-1

FS
type: SiteQuality
SIO_000300: 1.14e0

MQRankSum
type: SiteQuality
SIO_000300: 5.99e-1

QD
type: SiteQuality
SIO_000300: 9.48e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.03e-1

GenotypeQuality
all individuals: 3129
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 573
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 191
bin: 8.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11354
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.182872013248167e-4
allele num: 8454
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 730
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62680
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5930
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9316
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9054
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.259e1

MQRankSum
type: SiteQuality
SIO_000300: -3.867e0

VQSLOD
type: SiteQuality
SIO_000300: 2.75e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -8.29e-1

FS
type: SiteQuality
SIO_000300: 6.048e0

QD
type: SiteQuality
SIO_000300: 3.8e0

DP
type: SiteQuality
SIO_000300: 1.356531e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.248e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.7e0

GenotypeQuality
all individuals: 335
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 571
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 192
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9312
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9080
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 732
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11354
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.182592242194891e-4
allele num: 8456
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62646
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5922
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.104e1

FS
type: SiteQuality
SIO_000300: 4.365e0

MQRankSum
type: SiteQuality
SIO_000300: 1.23e0

MQ
type: SiteQuality
SIO_000300: 5.872e1

DP
type: SiteQuality
SIO_000300: 1.356354e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.256e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.8e-3

VQSLOD
type: SiteQuality
SIO_000300: -1.461e0

ClippingRankSum
type: SiteQuality
SIO_000300: 9.27e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.69e-1

GenotypeQuality
all individuals: 184
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 258
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3544
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
all individuals: 132
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 190
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1616
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9326
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9104
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11360
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.597239969332993e-5
allele num: 62608
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 734
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8456
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5930
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.95e1

VQSLOD
type: SiteQuality
SIO_000300: 1.14e0

QD
type: SiteQuality
SIO_000300: 1.24e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.795e0

MQRankSum
type: SiteQuality
SIO_000300: -1.54e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.9e-3

DP
type: SiteQuality
SIO_000300: 1.355484e6

ClippingRankSum
type: SiteQuality
SIO_000300: -4.24e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.07e-1

GenotypeQuality
all individuals: 339
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 447
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variant carriers: 0

GenotypeQuality
all individuals: 457
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variant carriers: 1

GenotypeQuality
all individuals: 309
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 185
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variant carriers: 0

GenotypeQuality
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bin: 4.25e1
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GenotypeQuality
all individuals: 162
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1241
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variant carriers: 0

GenotypeQuality
all individuals: 224
bin: 4.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9326
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62588
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 736
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 1.090750436300175e-4
allele num: 9168
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11360
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5932
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8478
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.48e0

DP
type: SiteQuality
SIO_000300: 1.356429e6

FS
type: SiteQuality
SIO_000300: 4.48e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.65e0

VQSLOD
type: SiteQuality
SIO_000300: -4.214e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.7e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -9.2e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.29e-1

QD
type: SiteQuality
SIO_000300: 8.630000000000001e0

GenotypeQuality
all individuals: 222
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 542
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 454
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variant carriers: 0

GenotypeQuality
all individuals: 1580
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 542
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 459
bin: 9.75e1
variant carriers: 1

South Asian
type: Population
allele count: 1
allele frequency: 1.07342206955775e-4
allele num: 9316
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62564
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5924
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8480
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 732
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9330
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11354
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.2e-3

QD
type: SiteQuality
SIO_000300: 5.56e0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.284e0

MQ
type: SiteQuality
SIO_000300: 5.936e1

VQSLOD
type: SiteQuality
SIO_000300: -2.182e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.43e-1

MQRankSum
type: SiteQuality
SIO_000300: -9.83e-1

DP
type: SiteQuality
SIO_000300: 1.35493e6

ClippingRankSum
type: SiteQuality
SIO_000300: 9.350000000000001e-1

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4513
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 435
bin: 1.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9330
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 734
num of homozygotes: 0

Latino
type: Population
allele count: 8
allele frequency: 7.043493572812115e-4
allele num: 11358
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8480
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 4
allele frequency: 6.392431361268258e-5
allele num: 62574
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9390
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5926
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.879e1

FS
type: SiteQuality
SIO_000300: 2.438e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.71e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.2e-3

MQRankSum
type: SiteQuality
SIO_000300: 4.0e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.393e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.99e-1

QD
type: SiteQuality
SIO_000300: 1.173e1

DP
type: SiteQuality
SIO_000300: 1.355066e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.541e0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 385
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variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 2232
bin: 7.5e0
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GenotypeQuality
all individuals: 180
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variant carriers: 0

GenotypeQuality
all individuals: 530
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5906
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.073191672032625e-4
allele num: 9318
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11352
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8476
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62528
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9410
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 738
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.63e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.087e0

MQ
type: SiteQuality
SIO_000300: 5.702e1

VQSLOD
type: SiteQuality
SIO_000300: -1.92e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.5e-3

QD
type: SiteQuality
SIO_000300: 8.859999999999999e0

FS
type: SiteQuality
SIO_000300: 1.306e0

MQRankSum
type: SiteQuality
SIO_000300: 8.169999999999999e-1

DP
type: SiteQuality
SIO_000300: 1.35238e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.46e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 37802
bin: 6.25e1
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GenotypeQuality
all individuals: 1158
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.688048615800135e-4
allele num: 5924
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11336
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 736
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.20666987333654e-5
allele num: 62370
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9656
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African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9256
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8476
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.03e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.94e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.54e-1

InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 3.955e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.5e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.693e0

MQ
type: SiteQuality
SIO_000300: 5.901e1

DP
type: SiteQuality
SIO_000300: 1.346228e6

QD
type: SiteQuality
SIO_000300: 2.297e1

GenotypeQuality
all individuals: 161
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1116
bin: 2.75e1
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GenotypeQuality
all individuals: 420
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GenotypeQuality
all individuals: 1531
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variant carriers: 1

GenotypeQuality
all individuals: 519
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GenotypeQuality
all individuals: 1165
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9268
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62426
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8488
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11342
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 2.01328769881216e-4
allele num: 9934
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 742
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5916
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.424e1

MQRankSum
type: SiteQuality
SIO_000300: 4.23e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.54e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.61e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.5e0

FS
type: SiteQuality
SIO_000300: 4.786e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.6e-3

VQSLOD
type: SiteQuality
SIO_000300: 5.34e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.344989e6

GenotypeQuality
all individuals: 1138
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1627
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1163
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 168
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 182
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 162
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 526
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1152
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 317
bin: 1.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 62408
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10032
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5922
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9266
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.819897689186806e-5
allele num: 11338
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8482
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 742
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.393e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.100000000000001e-1

MQRankSum
type: SiteQuality
SIO_000300: 4.25e-1

DP
type: SiteQuality
SIO_000300: 1.344951e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.2e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.293e0

VQSLOD
type: SiteQuality
SIO_000300: 1.11e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.25e-1

QD
type: SiteQuality
SIO_000300: 1.228e1

GenotypeQuality
all individuals: 509
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 171
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 5630
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1501
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 772
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1250
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 517
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 980
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1142
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.693193362682018e-4
allele num: 5906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8488
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.804304656972648e-5
allele num: 62444
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10234
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 746
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9240
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11336
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 7.2e-1

DP
type: SiteQuality
SIO_000300: 1.342123e6

VQSLOD
type: SiteQuality
SIO_000300: 5.629999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.46e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.7e-3

MQRankSum
type: SiteQuality
SIO_000300: -4.65e-1

QD
type: SiteQuality
SIO_000300: 1.083e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.11e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 36650
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1260
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1253
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 246
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 786
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 185
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 463
bin: 9.75e1
variant carriers: 5

GenotypeQuality
all individuals: 846
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 160
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 9.778994719342852e-5
allele num: 10226
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.827683615819209e-5
allele num: 11328
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9236
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.178967224711153e-4
allele num: 8482
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5896
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 744
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.205436420168606e-5
allele num: 62394
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 8.699999999999999e-2

QD
type: SiteQuality
SIO_000300: 1.114e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.02e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 3.249e0

VQSLOD
type: SiteQuality
SIO_000300: 1.55e0

DP
type: SiteQuality
SIO_000300: 1.342958e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.3e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.06e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.05e-1

GenotypeQuality
all individuals: 1483
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 591
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 159
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1089
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1303
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1132
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 35914
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 501
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 181
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9190
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 742
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5890
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.178967224711153e-4
allele num: 8482
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11326
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.208727739451307e-5
allele num: 62330
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10432
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.1e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.294e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 6.56e-1

QD
type: SiteQuality
SIO_000300: 7.74e0

FS
type: SiteQuality
SIO_000300: 6.04e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.54e-1

DP
type: SiteQuality
SIO_000300: 1.341538e6

ClippingRankSum
type: SiteQuality
SIO_000300: -6.18e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 1123
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1087
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 798
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1517
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 164
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 185
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 505
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 456
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 6073
bin: 2.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11318
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.083893344894862e-4
allele num: 9226
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8494
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.600307258993727e-5
allele num: 62488
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5900
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11042
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 750
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.5e-3

MQRankSum
type: SiteQuality
SIO_000300: 7.29e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.879999999999999e-1

FS
type: SiteQuality
SIO_000300: 6.21e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.88e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.08e0

MQ
type: SiteQuality
SIO_000300: 5.869e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.61e-1

QD
type: SiteQuality
SIO_000300: 1.256e1

DP
type: SiteQuality
SIO_000300: 1.346624e6

GenotypeQuality
all individuals: 1328
bin: 2.75e1
variant carriers: 2

GenotypeQuality
all individuals: 763
bin: 5.25e1
variant carriers: 2

GenotypeQuality
all individuals: 266
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 154
bin: 9.25e1
variant carriers: 4

GenotypeQuality
all individuals: 865
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1145
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 36848
bin: 6.25e1
variant carriers: 1

GenotypeQuality
all individuals: 488
bin: 8.25e1
variant carriers: 4

GenotypeQuality
all individuals: 176
bin: 8.75e1
variant carriers: 3

European (Finnish)
type: Population
allele count: 8
allele frequency: 1.354554690145615e-3
allele num: 5906
num of homozygotes: 0

South Asian
type: Population
allele count: 39
allele frequency: 3.286147623862487e-3
allele num: 11868
num of homozygotes: 1

European (Non-Finnish)
type: Population
allele count: 539
allele frequency: 8.614627285513361e-3
allele num: 62568
num of homozygotes: 3

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8486
num of homozygotes: 0

African
type: Population
allele count: 12
allele frequency: 1.302931596091205e-3
allele num: 9210
num of homozygotes: 0

Latino
type: Population
allele count: 124
allele frequency: 1.095212859918742e-2
allele num: 11322
num of homozygotes: 0

Other
type: Population
allele count: 4
allele frequency: 5.221932114882507e-3
allele num: 766
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.15e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 8.6e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.55e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 2.26e-1

FS
type: SiteQuality
SIO_000300: 5.29e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.4e-2

QD
type: SiteQuality
SIO_000300: 1.419e1

DP
type: SiteQuality
SIO_000300: 1.36622e6

GenotypeQuality
all individuals: 424
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 122
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 184
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 510
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 447
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 167
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5611
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 759
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 767
bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11336
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5906
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 772
num of homozygotes: 0

East Asian
type: Population
allele count: 3
allele frequency: 3.528581510232887e-4
allele num: 8502
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12110
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.596118240439252e-5
allele num: 62652
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9218
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -2.59e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.54e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.06e0

FS
type: SiteQuality
SIO_000300: 1.008e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.76e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.674e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.274e1

DP
type: SiteQuality
SIO_000300: 1.359776e6

GenotypeQuality
all individuals: 1307
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5509
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 182
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 174
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 445
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1326
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1161
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5625
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 813
bin: 7.5e0
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.596271110685439e-5
allele num: 62646
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8496
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9196
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5902
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11336
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12214
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 766
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -3.725e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.72e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.03e0

DP
type: SiteQuality
SIO_000300: 1.362918e6

MQ
type: SiteQuality
SIO_000300: 5.972e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.689e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

FS
type: SiteQuality
SIO_000300: 2.0121e1

QD
type: SiteQuality
SIO_000300: 1.222e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.91e0

GenotypeQuality
all individuals: 185
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1038
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1170
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 162
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 754
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 448
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 1281
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1265
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 38610
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11348
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8512
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12638
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.168726957276079e-4
allele num: 9222
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5914
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 782
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.591495050450393e-5
allele num: 62834
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.88e-1

FS
type: SiteQuality
SIO_000300: 6.59e-1

MQRankSum
type: SiteQuality
SIO_000300: 2.59e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.98e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.04e0

BaseQRankSum
type: SiteQuality
SIO_000300: 5.33e-1

DP
type: SiteQuality
SIO_000300: 1.367415e6

QD
type: SiteQuality
SIO_000300: 1.476e1

GenotypeQuality
all individuals: 123
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 274
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 536
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 790
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 40742
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 190
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5941
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1224
bin: 7.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5938
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14460
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8526
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 812
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11384
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 63490
num of homozygotes: 0

African
type: Population
allele count: 2
allele frequency: 2.15610176800345e-4
allele num: 9276
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.78e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.86e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -1.121e0

FS
type: SiteQuality
SIO_000300: 1.277e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.77e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.27e-1

QD
type: SiteQuality
SIO_000300: 1.268e1

DP
type: SiteQuality
SIO_000300: 1.398245e6

GenotypeQuality
all individuals: 372
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 640
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 140
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1698
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3644
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 306
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 176
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 919
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 560
bin: 9.75e1
variant carriers: 113

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11394
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 4
allele frequency: 6.740815638692282e-4
allele num: 5934
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.207729468599034e-3
allele num: 828
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.316829075585989e-4
allele num: 15188
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9290
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 93
allele frequency: 1.457588865901824e-3
allele num: 63804
num of homozygotes: 0

East Asian
type: Population
allele count: 15
allele frequency: 1.758087201125176e-3
allele num: 8532
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.399e1

FS
type: SiteQuality
SIO_000300: 2.01e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.79e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.7e-3

VQSLOD
type: SiteQuality
SIO_000300: 3.73e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.63e0

DP
type: SiteQuality
SIO_000300: 1.416867e6

MQRankSum
type: SiteQuality
SIO_000300: 1.7e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.06e-1

GenotypeQuality
all individuals: 708
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 803
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 130
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 305
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1748
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 457
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 200
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 572
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 269
bin: 4.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64252
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.361323155216285e-5
allele num: 15720
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8544
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9320
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5956
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 836
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11420
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -4.109e-1

FS
type: SiteQuality
SIO_000300: 2.535e0

MQRankSum
type: SiteQuality
SIO_000300: 2.25e0

MQ
type: SiteQuality
SIO_000300: 5.958e1

QD
type: SiteQuality
SIO_000300: 1.281e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -5.31e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.33e-1

DP
type: SiteQuality
SIO_000300: 1.429335e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.408e0

GenotypeQuality
all individuals: 761
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 656
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 100
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 451
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1365
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 301
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1782
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 463
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 187
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6000
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11426
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15896
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.553132668592551e-5
allele num: 64386
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9330
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8550
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 840
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.54e-1

DP
type: SiteQuality
SIO_000300: 1.436475e6

QD
type: SiteQuality
SIO_000300: 1.345e1

VQSLOD
type: SiteQuality
SIO_000300: 1.19e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.65e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.065e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.5e0

GenotypeQuality
all individuals: 762
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 282
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 131
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1787
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 724
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 605
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 215
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 192
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6380
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11440
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.550724188195888e-5
allele num: 64486
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15950
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8548
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.072961373390558e-4
allele num: 9320
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 844
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6058
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.928e1

QD
type: SiteQuality
SIO_000300: 1.349e1

MQRankSum
type: SiteQuality
SIO_000300: 2.22e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.48e-1

DP
type: SiteQuality
SIO_000300: 1.439385e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.1e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -2.312e0

FS
type: SiteQuality
SIO_000300: 3.705e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.72e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.91e-1

GenotypeQuality
all individuals: 209
bin: 8.75e1
variant carriers: 1

GenotypeQuality
all individuals: 289
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 706
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 258
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 928
bin: 9.75e1
variant carriers: 446

GenotypeQuality
all individuals: 369
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1330
bin: 7.75e1
variant carriers: 5

GenotypeQuality
all individuals: 181
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1753
bin: 7.25e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 265
allele frequency: 4.111842105263158e-3
allele num: 64448
num of homozygotes: 1

African
type: Population
allele count: 8
allele frequency: 8.565310492505353e-4
allele num: 9340
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.698946653075094e-4
allele num: 5886
num of homozygotes: 0

Latino
type: Population
allele count: 36
allele frequency: 3.146303093864709e-3
allele num: 11442
num of homozygotes: 0

South Asian
type: Population
allele count: 146
allele frequency: 9.14099674430253e-3
allele num: 15972
num of homozygotes: 1

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8550
num of homozygotes: 0

Other
type: Population
allele count: 2
allele frequency: 2.375296912114014e-3
allele num: 842
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.96e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.18e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.77e-2

FS
type: SiteQuality
SIO_000300: 6.62e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.09e-1

DP
type: SiteQuality
SIO_000300: 1.448836e6

QD
type: SiteQuality
SIO_000300: 1.312e1

VQSLOD
type: SiteQuality
SIO_000300: 4.52e0

MQRankSum
type: SiteQuality
SIO_000300: 2.54e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 1330
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6291
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 289
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 585
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 258
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 369
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 731
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 209
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 928
bin: 9.75e1
variant carriers: 1

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15972
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11442
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64448
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5886
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 842
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8550
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.070663811563169e-4
allele num: 9340
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.96e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.18e-1

QD
type: SiteQuality
SIO_000300: 1.312e1

DP
type: SiteQuality
SIO_000300: 1.448836e6

MQRankSum
type: SiteQuality
SIO_000300: 2.54e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.09e-1

FS
type: SiteQuality
SIO_000300: 6.62e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.77e-2

VQSLOD
type: SiteQuality
SIO_000300: 4.52e0

GenotypeQuality
all individuals: 585
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 125
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 429
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 369
bin: 4.75e1
variant carriers: 2

GenotypeQuality
all individuals: 6291
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 258
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 209
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 928
bin: 9.75e1
variant carriers: 38

GenotypeQuality
all individuals: 181
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5886
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.187648456057007e-3
allele num: 842
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.739730816290858e-5
allele num: 11442
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9340
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8550
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.252191334835963e-4
allele num: 15972
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 35
allele frequency: 5.430734856007944e-4
allele num: 64448
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.77e-2

FS
type: SiteQuality
SIO_000300: 6.62e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 2.54e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.52e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.96e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.18e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.09e-1

DP
type: SiteQuality
SIO_000300: 1.448836e6

QD
type: SiteQuality
SIO_000300: 1.312e1

GenotypeQuality
all individuals: 507
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1798
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 321
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 52
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 280
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 233
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 638
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1398
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 182
bin: 5.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6102
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.736676568233443e-5
allele num: 11446
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8552
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9332
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15992
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64572
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.445398e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.11e0

VQSLOD
type: SiteQuality
SIO_000300: -8.352000000000001e-1

QD
type: SiteQuality
SIO_000300: 8.01e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.87e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.4e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 9.56e-1

MQ
type: SiteQuality
SIO_000300: 5.917e1

MQRankSum
type: SiteQuality
SIO_000300: 1.49e0

GenotypeQuality
all individuals: 2537
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 405
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6435
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 236
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 509
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 421
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1818
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 743
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 413
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 854
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8554
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9312
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.250468925847193e-4
allele num: 15994
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6150
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64584
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11458
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.445561e6

ClippingRankSum
type: SiteQuality
SIO_000300: 5.39e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.72e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.01e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.4e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.66e-1

FS
type: SiteQuality
SIO_000300: 1.076e0

QD
type: SiteQuality
SIO_000300: 1.157e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 3.8e-2

GenotypeQuality
all individuals: 203
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 644
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 272
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 187
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2513
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 42829
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 239
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1816
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6411
bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8554
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6092
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15998
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9318
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11458
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.548371113588505e-5
allele num: 64584
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 852
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.16e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.0e-2

QD
type: SiteQuality
SIO_000300: 1.704e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: 9.71e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.07e0

DP
type: SiteQuality
SIO_000300: 1.446006e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.7e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 6.6e-2

GenotypeQuality
all individuals: 1722
bin: 2.5e0
variant carriers: 16

GenotypeQuality
all individuals: 1528
bin: 4.75e1
variant carriers: 6

GenotypeQuality
all individuals: 37246
bin: 6.25e1
variant carriers: 7

GenotypeQuality
all individuals: 1769
bin: 5.25e1
variant carriers: 5

GenotypeQuality
all individuals: 299
bin: 8.25e1
variant carriers: 3

GenotypeQuality
all individuals: 86
bin: 9.25e1
variant carriers: 2

GenotypeQuality
all individuals: 1120
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 247
bin: 9.75e1
variant carriers: 3

GenotypeQuality
all individuals: 738
bin: 7.75e1
variant carriers: 4

Other
type: Population
allele count: 1
allele frequency: 1.243781094527363e-3
allele num: 804
num of homozygotes: 0

African
type: Population
allele count: 5
allele frequency: 5.719514985129262e-4
allele num: 8742
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 3.201844262295082e-4
allele num: 15616
num of homozygotes: 0

East Asian
type: Population
allele count: 9
allele frequency: 1.109741060419236e-3
allele num: 8110
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 30
allele frequency: 5.992808629644427e-3
allele num: 5006
num of homozygotes: 0

Latino
type: Population
allele count: 10
allele frequency: 9.114108640174991e-4
allele num: 10972
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 45
allele frequency: 7.24124613800206e-4
allele num: 62144
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.07816e2

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.065e0

MQRankSum
type: SiteQuality
SIO_000300: 2.72e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.863e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.73e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -9.900000000000001e-3

VQSLOD
type: SiteQuality
SIO_000300: -4.338e2

DP
type: SiteQuality
SIO_000300: 1.523876e6

MQ
type: SiteQuality
SIO_000300: 5.974e1

QD
type: SiteQuality
SIO_000300: 2.7e-1

GenotypeQuality
all individuals: 44936
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 500
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2018
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 531
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1759
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6822
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 543
bin: 3.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8574
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9390
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6266
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11494
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16078
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.078628163290438e-5
allele num: 64964
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 1.03e0

FS
type: SiteQuality
SIO_000300: 1.281e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.051e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.732e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 3.77e-1

DP
type: SiteQuality
SIO_000300: 1.481565e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.67e-1

MQ
type: SiteQuality
SIO_000300: 5.95e1

QD
type: SiteQuality
SIO_000300: 2.092e1

GenotypeQuality
all individuals: 47
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 139
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 458
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1270
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 163
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2013
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 340
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 116
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1762
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9400
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16088
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65022
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.740644038294169e-4
allele num: 11490
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6266
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 862
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.39e-1

QD
type: SiteQuality
SIO_000300: 1.279e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.09e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 5.83e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.105e0

VQSLOD
type: SiteQuality
SIO_000300: 9.44e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 5.95e-1

DP
type: SiteQuality
SIO_000300: 1.483128e6

GenotypeQuality
all individuals: 171
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1273
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 2007
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45095
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 455
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 381
bin: 9.75e1
variant carriers: 4

GenotypeQuality
all individuals: 1764
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 136
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 166
bin: 8.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8576
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16054
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 3
allele frequency: 4.781638508128785e-4
allele num: 6274
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.075598203850649e-5
allele num: 65028
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9406
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11498
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.29e-1

FS
type: SiteQuality
SIO_000300: 7.574e0

DP
type: SiteQuality
SIO_000300: 1.482309e6

QD
type: SiteQuality
SIO_000300: 1.065e1

ClippingRankSum
type: SiteQuality
SIO_000300: 2.6e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.82e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -2.717e0

VQSLOD
type: SiteQuality
SIO_000300: 4.45e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 99
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 289
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 141
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 447
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1981
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 137
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6826
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 167
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16054
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9408
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 860
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11498
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.537893700787402e-5
allele num: 65024
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8574
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6274
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.963e1

FS
type: SiteQuality
SIO_000300: 2.349e0

MQRankSum
type: SiteQuality
SIO_000300: 7.42e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 9.61e-1

DP
type: SiteQuality
SIO_000300: 1.483263e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.3e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.312e0

QD
type: SiteQuality
SIO_000300: 9.960000000000001e0

VQSLOD
type: SiteQuality
SIO_000300: 7.2e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

GenotypeQuality
all individuals: 42
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 161
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 261
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 166
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1273
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1988
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 379
bin: 9.75e1
variant carriers: 2

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.059546514091969e-4
allele num: 9438
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.225874735400324e-5
allele num: 16062
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65062
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6272
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11502
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8572
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.19e0

DP
type: SiteQuality
SIO_000300: 1.484949e6

FS
type: SiteQuality
SIO_000300: 2.92e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.743e0

MQRankSum
type: SiteQuality
SIO_000300: 7.46e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.1e-3

QD
type: SiteQuality
SIO_000300: 5.83e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.39e0

VQSLOD
type: SiteQuality
SIO_000300: -8.463000000000001e-1

MQ
type: SiteQuality
SIO_000300: 5.925e1

GenotypeQuality
all individuals: 112
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1273
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 161
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45481
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 59
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 56
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 527
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 379
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11502
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16062
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65062
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.166588894073728e-4
allele num: 8572
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9438
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 864
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6272
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.925e1

FS
type: SiteQuality
SIO_000300: 2.92e0

MQRankSum
type: SiteQuality
SIO_000300: 7.46e-1

DP
type: SiteQuality
SIO_000300: 1.484949e6

VQSLOD
type: SiteQuality
SIO_000300: -8.463000000000001e-1

QD
type: SiteQuality
SIO_000300: 5.83e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.39e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.1e-3

BaseQRankSum
type: SiteQuality
SIO_000300: 1.19e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.743e0

GenotypeQuality
all individuals: 116
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 157
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 44
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1744
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45510
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 427
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 105
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 417
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 252
bin: 3.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8572
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11508
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9458
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16008
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.535579374097847e-5
allele num: 65122
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6284
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.084e1

MQRankSum
type: SiteQuality
SIO_000300: 1.87e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 7.17e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.56e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.04e-1

MQ
type: SiteQuality
SIO_000300: 5.943e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-3

FS
type: SiteQuality
SIO_000300: 5.37e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.72e-1

DP
type: SiteQuality
SIO_000300: 1.488223e6

GenotypeQuality
all individuals: 157
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 110
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 105
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 319
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 45510
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 252
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1247
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variant carriers: 0

GenotypeQuality
all individuals: 1744
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 163
bin: 8.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9458
num of homozygotes: 0

Latino
type: Population
allele count: 2
allele frequency: 1.737921445950643e-4
allele num: 11508
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.591343093570974e-4
allele num: 6284
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8572
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16008
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 63
allele frequency: 9.674150056816436e-4
allele num: 65122
num of homozygotes: 1

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 7.17e-1

DP
type: SiteQuality
SIO_000300: 1.488223e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.0e-3

MQ
type: SiteQuality
SIO_000300: 5.943e1

MQRankSum
type: SiteQuality
SIO_000300: 1.87e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.72e-1

FS
type: SiteQuality
SIO_000300: 5.37e-1

QD
type: SiteQuality
SIO_000300: 1.084e1

ClippingRankSum
type: SiteQuality
SIO_000300: 4.04e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.56e0

GenotypeQuality
all individuals: 100
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 318
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2016
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 62
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 117
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 163
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1258
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 120
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6850
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11510
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65136
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6284
num of homozygotes: 0

South Asian
type: Population
allele count: 3
allele frequency: 1.876172607879925e-4
allele num: 15990
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9470
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 866
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8578
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 6.25e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.12e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.2e-2

MQ
type: SiteQuality
SIO_000300: 5.943e1

DP
type: SiteQuality
SIO_000300: 1.485632e6

FS
type: SiteQuality
SIO_000300: 5.209e0

VQSLOD
type: SiteQuality
SIO_000300: 1.61e-1

QD
type: SiteQuality
SIO_000300: 9.76e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.74e0