http://identifiers.org/exac.variant/8-18490212-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18490212
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 18490212
    reference: chr 8
allele count: 1
allele frequency: 8.261458643138033e-6
allele num: 121044
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000393228
  ensembl transcript: ENST00000428502
  gene symbol: PSD3
  hgvsc: ENST00000428502.2:c.308T>G
  hgvsp: ENSP00000393228.2:p.Phe103Cys
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000401704
  ensembl transcript: ENST00000440756
  gene symbol: PSD3
  hgvsc: ENST00000440756.2:c.2327T>G
  hgvsp: ENSP00000401704.2:p.Phe776Cys
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000286485
  ensembl transcript: ENST00000286485
  gene symbol: PSD3
  hgvsc: ENST00000286485.8:c.719T>G
  hgvsp: ENSP00000286485.8:p.Phe240Cys
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl transcript: ENST00000521878
  gene symbol: PSD3
  hgvsc: ENST00000521878.1:n.225+51195T>G
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000324127
  ensembl transcript: ENST00000327040
  gene symbol: PSD3
  hgvsc: ENST00000327040.8:c.2321T>G
  hgvsp: ENSP00000324127.8:p.Phe774Cys
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000430640
  ensembl transcript: ENST00000523619
  gene symbol: PSD3
  hgvsc: ENST00000523619.1:c.2126T>G
  hgvsp: ENSP00000430640.1:p.Phe709Cys
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000428889
  ensembl transcript: ENST00000518315
  gene symbol: PSD3
  hgvsc: ENST00000518315.1:c.*327T>G
  variant of: http://identifiers.org/hgnc/19093
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27506
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20027
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1474
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 114
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8338
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1635
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 147
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 883
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45465
  bin: 6.25e1
  variant carriers: 0
hgvs: p.Phe774Cys
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: East Asian
population: South Asian
population: Other
population: African
population: European (Non-Finnish)
reference allele: A
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD

8-18490217-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18490217
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 18490217
    reference: chr 8
allele count: 3
allele frequency: 2.478929102627665e-5
allele num: 121020
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000428889
  ensembl transcript: ENST00000518315
  gene symbol: PSD3
  hgvsc: ENST00000518315.1:c.*322C>G
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000286485
  ensembl transcript: ENST00000286485
  gene symbol: PSD3
  hgvsc: ENST00000286485.8:c.714C>G
  hgvsp: ENSP00000286485.8:p.Asn238Lys
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000401704
  ensembl transcript: ENST00000440756
  gene symbol: PSD3
  hgvsc: ENST00000440756.2:c.2322C>G
  hgvsp: ENSP00000401704.2:p.Asn774Lys
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000393228
  ensembl transcript: ENST00000428502
  gene symbol: PSD3
  hgvsc: ENST00000428502.2:c.303C>G
  hgvsp: ENSP00000393228.2:p.Asn101Lys
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000430640
  ensembl transcript: ENST00000523619
  gene symbol: PSD3
  hgvsc: ENST00000523619.1:c.2121C>G
  hgvsp: ENSP00000430640.1:p.Asn707Lys
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000324127
  ensembl transcript: ENST00000327040
  gene symbol: PSD3
  hgvsc: ENST00000327040.8:c.2316C>G
  hgvsp: ENSP00000324127.8:p.Asn772Lys
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl transcript: ENST00000521878
  gene symbol: PSD3
  hgvsc: ENST00000521878.1:n.225+51190C>G
  variant of: http://identifiers.org/hgnc/19093
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 20012
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1475
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8333
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 51
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 654
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 115
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27504
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1537
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 883
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3092
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 382
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1635
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 312
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Asn772Lys
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
population: African
population: Other
population: East Asian
reference allele: G
site quality: DP
site quality: InbreedingCoeff
site quality: QD
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum

8-18490222-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18490222
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 18490222
    reference: chr 8
allele count: 2
allele frequency: 1.652701340340787e-5
allele num: 121014
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000286485
  ensembl transcript: ENST00000286485
  gene symbol: PSD3
  hgvsc: ENST00000286485.8:c.709A>G
  hgvsp: ENSP00000286485.8:p.Thr237Ala
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000401704
  ensembl transcript: ENST00000440756
  gene symbol: PSD3
  hgvsc: ENST00000440756.2:c.2317A>G
  hgvsp: ENSP00000401704.2:p.Thr773Ala
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000430640
  ensembl transcript: ENST00000523619
  gene symbol: PSD3
  hgvsc: ENST00000523619.1:c.2116A>G
  hgvsp: ENSP00000430640.1:p.Thr706Ala
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000393228
  ensembl transcript: ENST00000428502
  gene symbol: PSD3
  hgvsc: ENST00000428502.2:c.298A>G
  hgvsp: ENSP00000393228.2:p.Thr100Ala
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000428889
  ensembl transcript: ENST00000518315
  gene symbol: PSD3
  hgvsc: ENST00000518315.1:c.*317A>G
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000324127
  ensembl transcript: ENST00000327040
  gene symbol: PSD3
  hgvsc: ENST00000327040.8:c.2311A>G
  hgvsp: ENSP00000324127.8:p.Thr771Ala
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl transcript: ENST00000521878
  gene symbol: PSD3
  hgvsc: ENST00000521878.1:n.225+51185A>G
  variant of: http://identifiers.org/hgnc/19093
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20009
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 32
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1475
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8331
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27499
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 166
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45441
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3090
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7093
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Thr771Ala
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: Other
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: T
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP

8-18490224-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18490224
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 18490224
    reference: chr 8
allele count: 2
allele frequency: 1.652892561983471e-5
allele num: 121000
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000430640
  ensembl transcript: ENST00000523619
  gene symbol: PSD3
  hgvsc: ENST00000523619.1:c.2114C>G
  hgvsp: ENSP00000430640.1:p.Thr705Ser
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl transcript: ENST00000521878
  gene symbol: PSD3
  hgvsc: ENST00000521878.1:n.225+51183C>G
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000324127
  ensembl transcript: ENST00000327040
  gene symbol: PSD3
  hgvsc: ENST00000327040.8:c.2309C>G
  hgvsp: ENSP00000324127.8:p.Thr770Ser
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000393228
  ensembl transcript: ENST00000428502
  gene symbol: PSD3
  hgvsc: ENST00000428502.2:c.296C>G
  hgvsp: ENSP00000393228.2:p.Thr99Ser
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000401704
  ensembl transcript: ENST00000440756
  gene symbol: PSD3
  hgvsc: ENST00000440756.2:c.2315C>G
  hgvsp: ENSP00000401704.2:p.Thr772Ser
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000286485
  ensembl transcript: ENST00000286485
  gene symbol: PSD3
  hgvsc: ENST00000286485.8:c.707C>G
  hgvsp: ENSP00000286485.8:p.Thr236Ser
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000428889
  ensembl transcript: ENST00000518315
  gene symbol: PSD3
  hgvsc: ENST00000518315.1:c.*315C>G
  variant of: http://identifiers.org/hgnc/19093
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 58
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1475
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19999
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27497
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8333
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45429
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 312
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Thr770Ser
num of homozygotes: 0
population: South Asian
population: Other
population: African
population: Latino
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: QD

8-18490225-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18490225
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 18490225
    reference: chr 8
allele count: 1
allele frequency: 8.265829062654984e-6
allele num: 120980
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000401704
  ensembl transcript: ENST00000440756
  gene symbol: PSD3
  hgvsc: ENST00000440756.2:c.2314A>G
  hgvsp: ENSP00000401704.2:p.Thr772Ala
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000430640
  ensembl transcript: ENST00000523619
  gene symbol: PSD3
  hgvsc: ENST00000523619.1:c.2113A>G
  hgvsp: ENSP00000430640.1:p.Thr705Ala
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000393228
  ensembl transcript: ENST00000428502
  gene symbol: PSD3
  hgvsc: ENST00000428502.2:c.295A>G
  hgvsp: ENSP00000393228.2:p.Thr99Ala
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000428889
  ensembl transcript: ENST00000518315
  gene symbol: PSD3
  hgvsc: ENST00000518315.1:c.*314A>G
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl transcript: ENST00000521878
  gene symbol: PSD3
  hgvsc: ENST00000521878.1:n.225+51182A>G
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000286485
  ensembl transcript: ENST00000286485
  gene symbol: PSD3
  hgvsc: ENST00000286485.8:c.706A>G
  hgvsp: ENSP00000286485.8:p.Thr236Ala
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000324127
  ensembl transcript: ENST00000327040
  gene symbol: PSD3
  hgvsc: ENST00000327040.8:c.2308A>G
  hgvsp: ENSP00000324127.8:p.Thr770Ala
  variant of: http://identifiers.org/hgnc/19093
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19982
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1475
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27503
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8333
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 87
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 172
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7092
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Thr770Ala
num of homozygotes: 0
population: African
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: European (Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD

8-18490227-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18490227
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 18490227
    reference: chr 8
allele count: 1
allele frequency: 8.265692417053776e-6
allele num: 120982
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000430640
  ensembl transcript: ENST00000523619
  gene symbol: PSD3
  hgvsc: ENST00000523619.1:c.2111G>C
  hgvsp: ENSP00000430640.1:p.Ser704Thr
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000428889
  ensembl transcript: ENST00000518315
  gene symbol: PSD3
  hgvsc: ENST00000518315.1:c.*312G>C
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000393228
  ensembl transcript: ENST00000428502
  gene symbol: PSD3
  hgvsc: ENST00000428502.2:c.293G>C
  hgvsp: ENSP00000393228.2:p.Ser98Thr
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl transcript: ENST00000521878
  gene symbol: PSD3
  hgvsc: ENST00000521878.1:n.225+51180G>C
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000286485
  ensembl transcript: ENST00000286485
  gene symbol: PSD3
  hgvsc: ENST00000286485.8:c.704G>C
  hgvsp: ENSP00000286485.8:p.Ser235Thr
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000324127
  ensembl transcript: ENST00000327040
  gene symbol: PSD3
  hgvsc: ENST00000327040.8:c.2306G>C
  hgvsp: ENSP00000324127.8:p.Ser769Thr
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000401704
  ensembl transcript: ENST00000440756
  gene symbol: PSD3
  hgvsc: ENST00000440756.2:c.2312G>C
  hgvsp: ENSP00000401704.2:p.Ser771Thr
  variant of: http://identifiers.org/hgnc/19093
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 35
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8331
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1476
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27497
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 125
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19989
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7095
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1536
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 381
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 882
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ser769Thr
num of homozygotes: 0
population: African
population: Other
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD

8-18490230-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18490230
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 18490230
    reference: chr 8
allele count: 2
allele frequency: 1.653439153439154e-5
allele num: 120960
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000430640
  ensembl transcript: ENST00000523619
  gene symbol: PSD3
  hgvsc: ENST00000523619.1:c.2108G>A
  hgvsp: ENSP00000430640.1:p.Gly703Glu
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000324127
  ensembl transcript: ENST00000327040
  gene symbol: PSD3
  hgvsc: ENST00000327040.8:c.2303G>A
  hgvsp: ENSP00000324127.8:p.Gly768Glu
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000393228
  ensembl transcript: ENST00000428502
  gene symbol: PSD3
  hgvsc: ENST00000428502.2:c.290G>A
  hgvsp: ENSP00000393228.2:p.Gly97Glu
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000286485
  ensembl transcript: ENST00000286485
  gene symbol: PSD3
  hgvsc: ENST00000286485.8:c.701G>A
  hgvsp: ENSP00000286485.8:p.Gly234Glu
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl transcript: ENST00000521878
  gene symbol: PSD3
  hgvsc: ENST00000521878.1:n.225+51177G>A
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000428889
  ensembl transcript: ENST00000518315
  gene symbol: PSD3
  hgvsc: ENST00000518315.1:c.*309G>A
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000401704
  ensembl transcript: ENST00000440756
  gene symbol: PSD3
  hgvsc: ENST00000440756.2:c.2309G>A
  hgvsp: ENSP00000401704.2:p.Gly770Glu
  variant of: http://identifiers.org/hgnc/19093
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 40
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8334
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 63
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1475
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 97
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27490
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19975
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1536
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 177
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1637
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Gly768Glu
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: South Asian
population: Latino
population: East Asian
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: DP

8-18490233-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18490233
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 18490233
    reference: chr 8
allele count: 1
allele frequency: 8.267879288962381e-6
allele num: 120950
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl transcript: ENST00000521878
  gene symbol: PSD3
  hgvsc: ENST00000521878.1:n.225+51174T>C
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000393228
  ensembl transcript: ENST00000428502
  gene symbol: PSD3
  hgvsc: ENST00000428502.2:c.287T>C
  hgvsp: ENSP00000393228.2:p.Ile96Thr
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000286485
  ensembl transcript: ENST00000286485
  gene symbol: PSD3
  hgvsc: ENST00000286485.8:c.698T>C
  hgvsp: ENSP00000286485.8:p.Ile233Thr
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000430640
  ensembl transcript: ENST00000523619
  gene symbol: PSD3
  hgvsc: ENST00000523619.1:c.2105T>C
  hgvsp: ENSP00000430640.1:p.Ile702Thr
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000401704
  ensembl transcript: ENST00000440756
  gene symbol: PSD3
  hgvsc: ENST00000440756.2:c.2306T>C
  hgvsp: ENSP00000401704.2:p.Ile769Thr
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000324127
  ensembl transcript: ENST00000327040
  gene symbol: PSD3
  hgvsc: ENST00000327040.8:c.2300T>C
  hgvsp: ENSP00000324127.8:p.Ile767Thr
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000428889
  ensembl transcript: ENST00000518315
  gene symbol: PSD3
  hgvsc: ENST00000518315.1:c.*306T>C
  variant of: http://identifiers.org/hgnc/19093
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1474
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27491
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8334
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 652
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19962
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 880
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1539
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45370
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ile767Thr
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: East Asian
population: South Asian
reference allele: A
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD
site quality: ReadPosRankSum

8-18490234-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18490234
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 18490234
    reference: chr 8
allele count: 1
allele frequency: 8.268152729317216e-6
allele num: 120946
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000430640
  ensembl transcript: ENST00000523619
  gene symbol: PSD3
  hgvsc: ENST00000523619.1:c.2104A>C
  hgvsp: ENSP00000430640.1:p.Ile702Leu
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000401704
  ensembl transcript: ENST00000440756
  gene symbol: PSD3
  hgvsc: ENST00000440756.2:c.2305A>C
  hgvsp: ENSP00000401704.2:p.Ile769Leu
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000428889
  ensembl transcript: ENST00000518315
  gene symbol: PSD3
  hgvsc: ENST00000518315.1:c.*305A>C
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl transcript: ENST00000521878
  gene symbol: PSD3
  hgvsc: ENST00000521878.1:n.225+51173A>C
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000286485
  ensembl transcript: ENST00000286485
  gene symbol: PSD3
  hgvsc: ENST00000286485.8:c.697A>C
  hgvsp: ENSP00000286485.8:p.Ile233Leu
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000393228
  ensembl transcript: ENST00000428502
  gene symbol: PSD3
  hgvsc: ENST00000428502.2:c.286A>C
  hgvsp: ENSP00000393228.2:p.Ile96Leu
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000324127
  ensembl transcript: ENST00000327040
  gene symbol: PSD3
  hgvsc: ENST00000327040.8:c.2299A>C
  hgvsp: ENSP00000324127.8:p.Ile767Leu
  variant of: http://identifiers.org/hgnc/19093
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 27496
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1474
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8332
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19958
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 102
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7092
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3085
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 381
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 881
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1539
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ile767Leu
num of homozygotes: 0
population: Latino
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: T
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: MQ
site quality: DP
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

8-18490236-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18490236
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 18490236
    reference: chr 8
allele count: 11
allele frequency: 9.095870474804439e-5
allele num: 120934
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000286485
  ensembl transcript: ENST00000286485
  gene symbol: PSD3
  hgvsc: ENST00000286485.8:c.695G>A
  hgvsp: ENSP00000286485.8:p.Arg232His
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000324127
  ensembl transcript: ENST00000327040
  gene symbol: PSD3
  hgvsc: ENST00000327040.8:c.2297G>A
  hgvsp: ENSP00000324127.8:p.Arg766His
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000428889
  ensembl transcript: ENST00000518315
  gene symbol: PSD3
  hgvsc: ENST00000518315.1:c.*303G>A
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000401704
  ensembl transcript: ENST00000440756
  gene symbol: PSD3
  hgvsc: ENST00000440756.2:c.2303G>A
  hgvsp: ENSP00000401704.2:p.Arg768His
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000393228
  ensembl transcript: ENST00000428502
  gene symbol: PSD3
  hgvsc: ENST00000428502.2:c.284G>A
  hgvsp: ENSP00000393228.2:p.Arg95His
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000430640
  ensembl transcript: ENST00000523619
  gene symbol: PSD3
  hgvsc: ENST00000523619.1:c.2102G>A
  hgvsp: ENSP00000430640.1:p.Arg701His
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl transcript: ENST00000521878
  gene symbol: PSD3
  hgvsc: ENST00000521878.1:n.225+51171G>A
  variant of: http://identifiers.org/hgnc/19093
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 70
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8331
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1477
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 19947
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 137
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 27485
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1636
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 380
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3092
  bin: 9.75e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Arg766His
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: Other
population: European (Finnish)
population: South Asian
population: East Asian
reference allele: C
site quality: DP
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum

8-18490237-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18490237
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 18490237
    reference: chr 8
allele count: 2
allele frequency: 1.65404082172748e-5
allele num: 120916
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl transcript: ENST00000521878
  gene symbol: PSD3
  hgvsc: ENST00000521878.1:n.225+51170C>T
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000430640
  ensembl transcript: ENST00000523619
  gene symbol: PSD3
  hgvsc: ENST00000523619.1:c.2101C>T
  hgvsp: ENSP00000430640.1:p.Arg701Cys
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000428889
  ensembl transcript: ENST00000518315
  gene symbol: PSD3
  hgvsc: ENST00000518315.1:c.*302C>T
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000286485
  ensembl transcript: ENST00000286485
  gene symbol: PSD3
  hgvsc: ENST00000286485.8:c.694C>T
  hgvsp: ENSP00000286485.8:p.Arg232Cys
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000393228
  ensembl transcript: ENST00000428502
  gene symbol: PSD3
  hgvsc: ENST00000428502.2:c.283C>T
  hgvsp: ENSP00000393228.2:p.Arg95Cys
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000324127
  ensembl transcript: ENST00000327040
  gene symbol: PSD3
  hgvsc: ENST00000327040.8:c.2296C>T
  hgvsp: ENSP00000324127.8:p.Arg766Cys
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000401704
  ensembl transcript: ENST00000440756
  gene symbol: PSD3
  hgvsc: ENST00000440756.2:c.2302C>T
  hgvsp: ENSP00000401704.2:p.Arg768Cys
  variant of: http://identifiers.org/hgnc/19093
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1476
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19945
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8335
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27490
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 69
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 311
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3082
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 380
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Arg766Cys
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ

8-18490243-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18490243
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 18490243
    reference: chr 8
allele count: 1
allele frequency: 8.272393368849475e-6
allele num: 120884
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000324127
  ensembl transcript: ENST00000327040
  gene symbol: PSD3
  hgvsc: ENST00000327040.8:c.2290A>G
  hgvsp: ENSP00000324127.8:p.Ile764Val
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000286485
  ensembl transcript: ENST00000286485
  gene symbol: PSD3
  hgvsc: ENST00000286485.8:c.688A>G
  hgvsp: ENSP00000286485.8:p.Ile230Val
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000401704
  ensembl transcript: ENST00000440756
  gene symbol: PSD3
  hgvsc: ENST00000440756.2:c.2296A>G
  hgvsp: ENSP00000401704.2:p.Ile766Val
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl transcript: ENST00000521878
  gene symbol: PSD3
  hgvsc: ENST00000521878.1:n.225+51164A>G
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000428889
  ensembl transcript: ENST00000518315
  gene symbol: PSD3
  hgvsc: ENST00000518315.1:c.*296A>G
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000393228
  ensembl transcript: ENST00000428502
  gene symbol: PSD3
  hgvsc: ENST00000428502.2:c.277A>G
  hgvsp: ENSP00000393228.2:p.Ile93Val
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000430640
  ensembl transcript: ENST00000523619
  gene symbol: PSD3
  hgvsc: ENST00000523619.1:c.2095A>G
  hgvsp: ENSP00000430640.1:p.Ile699Val
  variant of: http://identifiers.org/hgnc/19093
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 37
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 77
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19906
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 122
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27503
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8329
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1474
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1635
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 311
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 84
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1538
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Ile764Val
num of homozygotes: 0
population: African
population: South Asian
population: European (Finnish)
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
reference allele: T
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: MQ
site quality: QD
site quality: ClippingRankSum

8-18490246-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18490246
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 18490246
    reference: chr 8
allele count: 1
allele frequency: 8.273625337150233e-6
allele num: 120866
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000286485
  ensembl transcript: ENST00000286485
  gene symbol: PSD3
  hgvsc: ENST00000286485.8:c.685A>T
  hgvsp: ENSP00000286485.8:p.Thr229Ser
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl transcript: ENST00000521878
  gene symbol: PSD3
  hgvsc: ENST00000521878.1:n.225+51161A>T
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000324127
  ensembl transcript: ENST00000327040
  gene symbol: PSD3
  hgvsc: ENST00000327040.8:c.2287A>T
  hgvsp: ENSP00000324127.8:p.Thr763Ser
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000393228
  ensembl transcript: ENST00000428502
  gene symbol: PSD3
  hgvsc: ENST00000428502.2:c.274A>T
  hgvsp: ENSP00000393228.2:p.Thr92Ser
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000430640
  ensembl transcript: ENST00000523619
  gene symbol: PSD3
  hgvsc: ENST00000523619.1:c.2092A>T
  hgvsp: ENSP00000430640.1:p.Thr698Ser
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000401704
  ensembl transcript: ENST00000440756
  gene symbol: PSD3
  hgvsc: ENST00000440756.2:c.2293A>T
  hgvsp: ENSP00000401704.2:p.Thr765Ser
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000428889
  ensembl transcript: ENST00000518315
  gene symbol: PSD3
  hgvsc: ENST00000518315.1:c.*293A>T
  variant of: http://identifiers.org/hgnc/19093
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27504
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 133
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19876
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1473
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8329
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 85
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 247
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 877
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 379
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Thr763Ser
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
reference allele: T
site quality: FS
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum

8-18490249-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18490249
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 18490249
    reference: chr 8
allele count: 1
allele frequency: 8.274857672448034e-6
allele num: 120848
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000428889
  ensembl transcript: ENST00000518315
  gene symbol: PSD3
  hgvsc: ENST00000518315.1:c.*290A>G
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000286485
  ensembl transcript: ENST00000286485
  gene symbol: PSD3
  hgvsc: ENST00000286485.8:c.682A>G
  hgvsp: ENSP00000286485.8:p.Lys228Glu
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000393228
  ensembl transcript: ENST00000428502
  gene symbol: PSD3
  hgvsc: ENST00000428502.2:c.271A>G
  hgvsp: ENSP00000393228.2:p.Lys91Glu
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000401704
  ensembl transcript: ENST00000440756
  gene symbol: PSD3
  hgvsc: ENST00000440756.2:c.2290A>G
  hgvsp: ENSP00000401704.2:p.Lys764Glu
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000324127
  ensembl transcript: ENST00000327040
  gene symbol: PSD3
  hgvsc: ENST00000327040.8:c.2284A>G
  hgvsp: ENSP00000324127.8:p.Lys762Glu
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl transcript: ENST00000521878
  gene symbol: PSD3
  hgvsc: ENST00000521878.1:n.225+51158A>G
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000430640
  ensembl transcript: ENST00000523619
  gene symbol: PSD3
  hgvsc: ENST00000523619.1:c.2089A>G
  hgvsp: ENSP00000430640.1:p.Lys697Glu
  variant of: http://identifiers.org/hgnc/19093
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 186
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 650
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 50
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1473
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 89
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19857
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27494
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8332
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 256
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1632
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45300
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 312
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Lys762Glu
num of homozygotes: 0
population: Other
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
population: South Asian
reference allele: T
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

8-18490262-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18490262
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 18490262
    reference: chr 8
allele count: 8
allele frequency: 6.63437935381145e-5
allele num: 120584
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000428889
  ensembl transcript: ENST00000518315
  gene symbol: PSD3
  hgvsc: ENST00000518315.1:c.*277C>T
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000286485
  ensembl transcript: ENST00000286485
  gene symbol: PSD3
  hgvsc: ENST00000286485.8:c.669C>T
  hgvsp: ENST00000286485.8:c.669C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000324127
  ensembl transcript: ENST00000327040
  gene symbol: PSD3
  hgvsc: ENST00000327040.8:c.2271C>T
  hgvsp: ENST00000327040.8:c.2271C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000430640
  ensembl transcript: ENST00000523619
  gene symbol: PSD3
  hgvsc: ENST00000523619.1:c.2076C>T
  hgvsp: ENST00000523619.1:c.2076C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000393228
  ensembl transcript: ENST00000428502
  gene symbol: PSD3
  hgvsc: ENST00000428502.2:c.258C>T
  hgvsp: ENST00000428502.2:c.258C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000401704
  ensembl transcript: ENST00000440756
  gene symbol: PSD3
  hgvsc: ENST00000440756.2:c.2277C>T
  hgvsp: ENST00000440756.2:c.2277C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl transcript: ENST00000521878
  gene symbol: PSD3
  hgvsc: ENST00000521878.1:n.225+51145C>T
  variant of: http://identifiers.org/hgnc/19093
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 653
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 74
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1477
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 273
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19613
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 100
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8351
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 27472
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 206
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3081
  bin: 9.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7052
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45037
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Asn757Asn
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: Other
reference allele: G
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum

8-18490265-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18490265
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 18490265
    reference: chr 8
allele count: 2
allele frequency: 1.659337924168257e-5
allele num: 120530
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000393228
  ensembl transcript: ENST00000428502
  gene symbol: PSD3
  hgvsc: ENST00000428502.2:c.255T>C
  hgvsp: ENST00000428502.2:c.255T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000324127
  ensembl transcript: ENST00000327040
  gene symbol: PSD3
  hgvsc: ENST00000327040.8:c.2268T>C
  hgvsp: ENST00000327040.8:c.2268T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000428889
  ensembl transcript: ENST00000518315
  gene symbol: PSD3
  hgvsc: ENST00000518315.1:c.*274T>C
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000286485
  ensembl transcript: ENST00000286485
  gene symbol: PSD3
  hgvsc: ENST00000286485.8:c.666T>C
  hgvsp: ENST00000286485.8:c.666T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl transcript: ENST00000521878
  gene symbol: PSD3
  hgvsc: ENST00000521878.1:n.225+51142T>C
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000430640
  ensembl transcript: ENST00000523619
  gene symbol: PSD3
  hgvsc: ENST00000523619.1:c.2073T>C
  hgvsp: ENST00000523619.1:c.2073T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000401704
  ensembl transcript: ENST00000440756
  gene symbol: PSD3
  hgvsc: ENST00000440756.2:c.2274T>C
  hgvsp: ENST00000440756.2:c.2274T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19093
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19563
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27481
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 301
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 647
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1469
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 106
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8334
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 83
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 482
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 308
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45021
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 378
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Ala756Ala
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: Other
population: East Asian
reference allele: A
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum

8-18490266-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18490266
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 18490266
    reference: chr 8
allele count: 1
allele frequency: 8.298617450332775e-6
allele num: 120502
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000428889
  ensembl transcript: ENST00000518315
  gene symbol: PSD3
  hgvsc: ENST00000518315.1:c.*273C>T
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000401704
  ensembl transcript: ENST00000440756
  gene symbol: PSD3
  hgvsc: ENST00000440756.2:c.2273C>T
  hgvsp: ENSP00000401704.2:p.Ala758Val
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000286485
  ensembl transcript: ENST00000286485
  gene symbol: PSD3
  hgvsc: ENST00000286485.8:c.665C>T
  hgvsp: ENSP00000286485.8:p.Ala222Val
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000324127
  ensembl transcript: ENST00000327040
  gene symbol: PSD3
  hgvsc: ENST00000327040.8:c.2267C>T
  hgvsp: ENSP00000324127.8:p.Ala756Val
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl transcript: ENST00000521878
  gene symbol: PSD3
  hgvsc: ENST00000521878.1:n.225+51141C>T
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000393228
  ensembl transcript: ENST00000428502
  gene symbol: PSD3
  hgvsc: ENST00000428502.2:c.254C>T
  hgvsp: ENSP00000393228.2:p.Ala85Val
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000430640
  ensembl transcript: ENST00000523619
  gene symbol: PSD3
  hgvsc: ENST00000523619.1:c.2072C>T
  hgvsp: ENSP00000430640.1:p.Ala691Val
  variant of: http://identifiers.org/hgnc/19093
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27484
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19533
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 90
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1469
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 282
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 108
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 646
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8334
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 306
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 570
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 307
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1521
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 496
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3073
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ala756Val
num of homozygotes: 0
population: South Asian
population: Latino
population: East Asian
population: African
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: G
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD

8-18490272-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18490272
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 18490272
    reference: chr 8
allele count: 1
allele frequency: 8.317945134833891e-6
allele num: 120222
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl transcript: ENST00000521878
  gene symbol: PSD3
  hgvsc: ENST00000521878.1:n.225+51135A>C
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000393228
  ensembl transcript: ENST00000428502
  gene symbol: PSD3
  hgvsc: ENST00000428502.2:c.248A>C
  hgvsp: ENSP00000393228.2:p.Glu83Ala
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000430640
  ensembl transcript: ENST00000523619
  gene symbol: PSD3
  hgvsc: ENST00000523619.1:c.2066A>C
  hgvsp: ENSP00000430640.1:p.Glu689Ala
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000286485
  ensembl transcript: ENST00000286485
  gene symbol: PSD3
  hgvsc: ENST00000286485.8:c.659A>C
  hgvsp: ENSP00000286485.8:p.Glu220Ala
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000324127
  ensembl transcript: ENST00000327040
  gene symbol: PSD3
  hgvsc: ENST00000327040.8:c.2261A>C
  hgvsp: ENSP00000324127.8:p.Glu754Ala
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000401704
  ensembl transcript: ENST00000440756
  gene symbol: PSD3
  hgvsc: ENST00000440756.2:c.2267A>C
  hgvsp: ENSP00000401704.2:p.Glu756Ala
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000428889
  ensembl transcript: ENST00000518315
  gene symbol: PSD3
  hgvsc: ENST00000518315.1:c.*267A>C
  variant of: http://identifiers.org/hgnc/19093
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27396
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 385
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8332
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 185
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 116
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 469
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 441
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19237
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1468
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3071
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44608
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1607
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1501
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Glu754Ala
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: T
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: DP
site quality: ReadPosRankSum

8-18490281-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18490281
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 18490281
    reference: chr 8
allele count: 3
allele frequency: 2.52037301520625e-5
allele num: 119030
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000324127
  ensembl transcript: ENST00000327040
  gene symbol: PSD3
  hgvsc: ENST00000327040.8:c.2252G>A
  hgvsp: ENSP00000324127.8:p.Ser751Asn
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000430640
  ensembl transcript: ENST00000523619
  gene symbol: PSD3
  hgvsc: ENST00000523619.1:c.2057G>A
  hgvsp: ENSP00000430640.1:p.Ser686Asn
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000401704
  ensembl transcript: ENST00000440756
  gene symbol: PSD3
  hgvsc: ENST00000440756.2:c.2258G>A
  hgvsp: ENSP00000401704.2:p.Ser753Asn
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl transcript: ENST00000521878
  gene symbol: PSD3
  hgvsc: ENST00000521878.1:n.225+51126G>A
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000286485
  ensembl transcript: ENST00000286485
  gene symbol: PSD3
  hgvsc: ENST00000286485.8:c.650G>A
  hgvsp: ENSP00000286485.8:p.Ser217Asn
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000393228
  ensembl transcript: ENST00000428502
  gene symbol: PSD3
  hgvsc: ENST00000428502.2:c.239G>A
  hgvsp: ENSP00000393228.2:p.Ser80Asn
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000428889
  ensembl transcript: ENST00000518315
  gene symbol: PSD3
  hgvsc: ENST00000518315.1:c.*258G>A
  variant of: http://identifiers.org/hgnc/19093
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1453
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 642
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8211
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18315
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1058
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 994
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27054
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6808
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43214
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 211
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1463
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Ser751Asn
num of homozygotes: 0
population: Other
population: South Asian
population: European (Finnish)
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
reference allele: C
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum

8-18490286-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18490286
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 18490286
    reference: chr 8
allele count: 5
allele frequency: 4.243977795508174e-5
allele num: 117814
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000286485
  ensembl transcript: ENST00000286485
  gene symbol: PSD3
  hgvsc: ENST00000286485.8:c.645A>T
  hgvsp: ENST00000286485.8:c.645A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000401704
  ensembl transcript: ENST00000440756
  gene symbol: PSD3
  hgvsc: ENST00000440756.2:c.2253A>T
  hgvsp: ENST00000440756.2:c.2253A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl transcript: ENST00000521878
  gene symbol: PSD3
  hgvsc: ENST00000521878.1:n.225+51121A>T
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000393228
  ensembl transcript: ENST00000428502
  gene symbol: PSD3
  hgvsc: ENST00000428502.2:c.234A>T
  hgvsp: ENST00000428502.2:c.234A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000428889
  ensembl transcript: ENST00000518315
  gene symbol: PSD3
  hgvsc: ENST00000518315.1:c.*253A>T
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000324127
  ensembl transcript: ENST00000327040
  gene symbol: PSD3
  hgvsc: ENST00000327040.8:c.2247A>T
  hgvsp: ENST00000327040.8:c.2247A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000430640
  ensembl transcript: ENST00000523619
  gene symbol: PSD3
  hgvsc: ENST00000523619.1:c.2052A>T
  hgvsp: ENST00000523619.1:c.2052A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19093
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17715
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1563
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26599
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1676
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1421
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7925
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6575
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 839
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1542
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3065
  bin: 9.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 41640
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Ser749Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Other
population: Latino
population: East Asian
population: African
population: European (Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: VQSLOD
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQ

8-18490286-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18490286
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 18490286
    reference: chr 8
allele count: 1
allele frequency: 8.487955591016347e-6
allele num: 117814
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000430640
  ensembl transcript: ENST00000523619
  gene symbol: PSD3
  hgvsc: ENST00000523619.1:c.2052A>G
  hgvsp: ENST00000523619.1:c.2052A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000286485
  ensembl transcript: ENST00000286485
  gene symbol: PSD3
  hgvsc: ENST00000286485.8:c.645A>G
  hgvsp: ENST00000286485.8:c.645A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000428889
  ensembl transcript: ENST00000518315
  gene symbol: PSD3
  hgvsc: ENST00000518315.1:c.*253A>G
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000401704
  ensembl transcript: ENST00000440756
  gene symbol: PSD3
  hgvsc: ENST00000440756.2:c.2253A>G
  hgvsp: ENST00000440756.2:c.2253A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl transcript: ENST00000521878
  gene symbol: PSD3
  hgvsc: ENST00000521878.1:n.225+51121A>G
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000324127
  ensembl transcript: ENST00000327040
  gene symbol: PSD3
  hgvsc: ENST00000327040.8:c.2247A>G
  hgvsp: ENST00000327040.8:c.2247A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000393228
  ensembl transcript: ENST00000428502
  gene symbol: PSD3
  hgvsc: ENST00000428502.2:c.234A>G
  hgvsp: ENST00000428502.2:c.234A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19093
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26599
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1421
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17715
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1563
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1676
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7925
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41640
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 216
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3065
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 104
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 380
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 316
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Ser749Ser
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
population: African
population: Other
population: European (Non-Finnish)
reference allele: T
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD

8-18490288-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18490288
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 18490288
    reference: chr 8
allele count: 1
allele frequency: 8.506728822498597e-6
allele num: 117554
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000430640
  ensembl transcript: ENST00000523619
  gene symbol: PSD3
  hgvsc: ENST00000523619.1:c.2050T>C
  hgvsp: ENSP00000430640.1:p.Ser684Pro
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000286485
  ensembl transcript: ENST00000286485
  gene symbol: PSD3
  hgvsc: ENST00000286485.8:c.643T>C
  hgvsp: ENSP00000286485.8:p.Ser215Pro
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl transcript: ENST00000521878
  gene symbol: PSD3
  hgvsc: ENST00000521878.1:n.225+51119T>C
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000401704
  ensembl transcript: ENST00000440756
  gene symbol: PSD3
  hgvsc: ENST00000440756.2:c.2251T>C
  hgvsp: ENSP00000401704.2:p.Ser751Pro
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000393228
  ensembl transcript: ENST00000428502
  gene symbol: PSD3
  hgvsc: ENST00000428502.2:c.232T>C
  hgvsp: ENSP00000393228.2:p.Ser78Pro
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000324127
  ensembl transcript: ENST00000327040
  gene symbol: PSD3
  hgvsc: ENST00000327040.8:c.2245T>C
  hgvsp: ENSP00000324127.8:p.Ser749Pro
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000428889
  ensembl transcript: ENST00000518315
  gene symbol: PSD3
  hgvsc: ENST00000518315.1:c.*251T>C
  variant of: http://identifiers.org/hgnc/19093
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 7819
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1677
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1783
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1401
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 222
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26499
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17688
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41595
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 228
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 366
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 298
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 831
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1444
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1529
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 169
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Ser749Pro
num of homozygotes: 0
population: African
population: South Asian
population: Other
population: European (Finnish)
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: FS
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP

8-18490289-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18490289
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 18490289
    reference: chr 8
allele count: 1
allele frequency: 8.530385232197085e-6
allele num: 117228
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000286485
  ensembl transcript: ENST00000286485
  gene symbol: PSD3
  hgvsc: ENST00000286485.8:c.642C>G
  hgvsp: ENST00000286485.8:c.642C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000324127
  ensembl transcript: ENST00000327040
  gene symbol: PSD3
  hgvsc: ENST00000327040.8:c.2244C>G
  hgvsp: ENST00000327040.8:c.2244C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000430640
  ensembl transcript: ENST00000523619
  gene symbol: PSD3
  hgvsc: ENST00000523619.1:c.2049C>G
  hgvsp: ENST00000523619.1:c.2049C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000393228
  ensembl transcript: ENST00000428502
  gene symbol: PSD3
  hgvsc: ENST00000428502.2:c.231C>G
  hgvsp: ENST00000428502.2:c.231C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000401704
  ensembl transcript: ENST00000440756
  gene symbol: PSD3
  hgvsc: ENST00000440756.2:c.2250C>G
  hgvsp: ENST00000440756.2:c.2250C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000428889
  ensembl transcript: ENST00000518315
  gene symbol: PSD3
  hgvsc: ENST00000518315.1:c.*250C>G
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl transcript: ENST00000521878
  gene symbol: PSD3
  hgvsc: ENST00000521878.1:n.225+51118C>G
  variant of: http://identifiers.org/hgnc/19093
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 26357
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1825
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7761
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1919
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1402
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17567
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 592
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 380
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 398
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 296
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 241
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 241
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3269
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1435
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Pro748Pro
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Latino
population: Other
population: European (Finnish)
population: African
reference allele: G
site quality: ClippingRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD

8-18490290-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18490290
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 18490290
    reference: chr 8
allele count: 4
allele frequency: 3.4196802598957e-5
allele num: 116970
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000430640
  ensembl transcript: ENST00000523619
  gene symbol: PSD3
  hgvsc: ENST00000523619.1:c.2048C>T
  hgvsp: ENSP00000430640.1:p.Pro683Leu
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000286485
  ensembl transcript: ENST00000286485
  gene symbol: PSD3
  hgvsc: ENST00000286485.8:c.641C>T
  hgvsp: ENSP00000286485.8:p.Pro214Leu
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000324127
  ensembl transcript: ENST00000327040
  gene symbol: PSD3
  hgvsc: ENST00000327040.8:c.2243C>T
  hgvsp: ENSP00000324127.8:p.Pro748Leu
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000393228
  ensembl transcript: ENST00000428502
  gene symbol: PSD3
  hgvsc: ENST00000428502.2:c.230C>T
  hgvsp: ENSP00000393228.2:p.Pro77Leu
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl transcript: ENST00000521878
  gene symbol: PSD3
  hgvsc: ENST00000521878.1:n.225+51117C>T
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000401704
  ensembl transcript: ENST00000440756
  gene symbol: PSD3
  hgvsc: ENST00000440756.2:c.2249C>T
  hgvsp: ENSP00000401704.2:p.Pro750Leu
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000428889
  ensembl transcript: ENST00000518315
  gene symbol: PSD3
  hgvsc: ENST00000518315.1:c.*249C>T
  variant of: http://identifiers.org/hgnc/19093
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17454
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1952
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1396
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2062
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 205
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 26244
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7680
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 296
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 312
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6445
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 144
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 182
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 418
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Pro748Leu
num of homozygotes: 0
population: African
population: Latino
population: Other
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
reference allele: G
site quality: MQRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: DP

8-18490291-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18490291
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 18490291
    reference: chr 8
allele count: 1
allele frequency: 8.576035127439883e-6
allele num: 116604
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl transcript: ENST00000521878
  gene symbol: PSD3
  hgvsc: ENST00000521878.1:n.225+51116C>A
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000393228
  ensembl transcript: ENST00000428502
  gene symbol: PSD3
  hgvsc: ENST00000428502.2:c.229C>A
  hgvsp: ENSP00000393228.2:p.Pro77Thr
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000401704
  ensembl transcript: ENST00000440756
  gene symbol: PSD3
  hgvsc: ENST00000440756.2:c.2248C>A
  hgvsp: ENSP00000401704.2:p.Pro750Thr
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000428889
  ensembl transcript: ENST00000518315
  gene symbol: PSD3
  hgvsc: ENST00000518315.1:c.*248C>A
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000324127
  ensembl transcript: ENST00000327040
  gene symbol: PSD3
  hgvsc: ENST00000327040.8:c.2242C>A
  hgvsp: ENSP00000324127.8:p.Pro748Thr
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000430640
  ensembl transcript: ENST00000523619
  gene symbol: PSD3
  hgvsc: ENST00000523619.1:c.2047C>A
  hgvsp: ENSP00000430640.1:p.Pro683Thr
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000286485
  ensembl transcript: ENST00000286485
  gene symbol: PSD3
  hgvsc: ENST00000286485.8:c.640C>A
  hgvsp: ENSP00000286485.8:p.Pro214Thr
  variant of: http://identifiers.org/hgnc/19093
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 680
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17338
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2229
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7585
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2128
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 26079
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 632
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1383
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 136
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 289
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 818
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3049
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 237
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6407
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 187
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Pro748Thr
num of homozygotes: 0
population: Latino
population: South Asian
population: East Asian
population: African
population: European (Finnish)
population: Other
population: European (Non-Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: QD

8-18490293-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18490293
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 18490293
    reference: chr 8
allele count: 1
allele frequency: 8.635578583765113e-6
allele num: 115800
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000324127
  ensembl transcript: ENST00000327040
  gene symbol: PSD3
  hgvsc: ENST00000327040.8:c.2240C>G
  hgvsp: ENSP00000324127.8:p.Ser747Cys
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000393228
  ensembl transcript: ENST00000428502
  gene symbol: PSD3
  hgvsc: ENST00000428502.2:c.227C>G
  hgvsp: ENSP00000393228.2:p.Ser76Cys
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl transcript: ENST00000521878
  gene symbol: PSD3
  hgvsc: ENST00000521878.1:n.225+51114C>G
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000428889
  ensembl transcript: ENST00000518315
  gene symbol: PSD3
  hgvsc: ENST00000518315.1:c.*246C>G
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000286485
  ensembl transcript: ENST00000286485
  gene symbol: PSD3
  hgvsc: ENST00000286485.8:c.638C>G
  hgvsp: ENSP00000286485.8:p.Ser213Cys
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000430640
  ensembl transcript: ENST00000523619
  gene symbol: PSD3
  hgvsc: ENST00000523619.1:c.2045C>G
  hgvsp: ENSP00000430640.1:p.Ser682Cys
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000401704
  ensembl transcript: ENST00000440756
  gene symbol: PSD3
  hgvsc: ENST00000440756.2:c.2246C>G
  hgvsp: ENSP00000401704.2:p.Ser749Cys
  variant of: http://identifiers.org/hgnc/19093
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 17007
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2510
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 624
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 25648
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 221
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 189
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7415
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 805
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2654
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1377
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 321
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 534
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 180
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 813
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1388
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 254
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 32
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4481
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 4.25e1
  variant carriers: 0
hgvs: p.Ser747Cys
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
reference allele: G
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: QD
site quality: MQ
site quality: ClippingRankSum
site quality: VQSLOD

http://identifiers.org/exac.variant/8-18490295-C-CA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18490295
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 18490296
    reference: chr 8
allele count: 1
allele frequency: 8.796157838256249e-6
allele num: 113686
alternate allele: CA
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000286485
  ensembl transcript: ENST00000286485
  gene symbol: PSD3
  hgvsc: ENST00000286485.8:c.635_636insT
  hgvsp: ENSP00000286485.8:p.Lys212AsnfsTer8
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000428889
  ensembl transcript: ENST00000518315
  gene symbol: PSD3
  hgvsc: ENST00000518315.1:c.*243_*244insT
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl transcript: ENST00000521878
  gene symbol: PSD3
  hgvsc: ENST00000521878.1:n.225+51111_225+51112insT
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000324127
  ensembl transcript: ENST00000327040
  gene symbol: PSD3
  hgvsc: ENST00000327040.8:c.2237_2238insT
  hgvsp: ENSP00000324127.8:p.Lys746AsnfsTer8
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000401704
  ensembl transcript: ENST00000440756
  gene symbol: PSD3
  hgvsc: ENST00000440756.2:c.2243_2244insT
  hgvsp: ENSP00000401704.2:p.Lys748AsnfsTer8
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000393228
  ensembl transcript: ENST00000428502
  gene symbol: PSD3
  hgvsc: ENST00000428502.2:c.224_225insT
  hgvsp: ENSP00000393228.2:p.Lys75AsnfsTer8
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000430640
  ensembl transcript: ENST00000523619
  gene symbol: PSD3
  hgvsc: ENST00000523619.1:c.2042_2043insT
  hgvsp: ENSP00000430640.1:p.Lys681AsnfsTer8
  variant of: http://identifiers.org/hgnc/19093
canonical: true
consequence: frameshift
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3427
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16120
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7431
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1402
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3118
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 24772
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37686
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 405
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 742
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 661
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 555
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 301
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 280
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1234
  bin: 7.25e1
  variant carriers: 0
hgvs: p.Lys746AsnfsTer8
num of homozygotes: 0
population: South Asian
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Latino
population: Other
reference allele: C
site quality: MQ
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: VQSLOD

8-18490295-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18490295
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 18490295
    reference: chr 8
allele count: 4
allele frequency: 3.5184631353025e-5
allele num: 113686
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000286485
  ensembl transcript: ENST00000286485
  gene symbol: PSD3
  hgvsc: ENST00000286485.8:c.636G>C
  hgvsp: ENSP00000286485.8:p.Lys212Asn
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000428889
  ensembl transcript: ENST00000518315
  gene symbol: PSD3
  hgvsc: ENST00000518315.1:c.*244G>C
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl transcript: ENST00000521878
  gene symbol: PSD3
  hgvsc: ENST00000521878.1:n.225+51112G>C
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000393228
  ensembl transcript: ENST00000428502
  gene symbol: PSD3
  hgvsc: ENST00000428502.2:c.225G>C
  hgvsp: ENSP00000393228.2:p.Lys75Asn
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000430640
  ensembl transcript: ENST00000523619
  gene symbol: PSD3
  hgvsc: ENST00000523619.1:c.2043G>C
  hgvsp: ENSP00000430640.1:p.Lys681Asn
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000324127
  ensembl transcript: ENST00000327040
  gene symbol: PSD3
  hgvsc: ENST00000327040.8:c.2238G>C
  hgvsp: ENSP00000324127.8:p.Lys746Asn
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000401704
  ensembl transcript: ENST00000440756
  gene symbol: PSD3
  hgvsc: ENST00000440756.2:c.2244G>C
  hgvsp: ENSP00000401704.2:p.Lys748Asn
  variant of: http://identifiers.org/hgnc/19093
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 24772
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 219
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 184
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16120
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7431
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1402
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3118
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 690
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3427
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5703
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 238
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 301
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 405
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 280
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 714
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 742
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 173
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Lys746Asn
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: Latino
population: Other
reference allele: C
site quality: BaseQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: DP
site quality: QD

8-18490301-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18490301
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 18490301
    reference: chr 8
allele count: 1
allele frequency: 8.964911337026877e-6
allele num: 111546
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000393228
  ensembl transcript: ENST00000428502
  gene symbol: PSD3
  hgvsc: ENST00000428502.2:c.219A>G
  hgvsp: ENST00000428502.2:c.219A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000286485
  ensembl transcript: ENST00000286485
  gene symbol: PSD3
  hgvsc: ENST00000286485.8:c.630A>G
  hgvsp: ENST00000286485.8:c.630A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl transcript: ENST00000521878
  gene symbol: PSD3
  hgvsc: ENST00000521878.1:n.225+51106A>G
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000401704
  ensembl transcript: ENST00000440756
  gene symbol: PSD3
  hgvsc: ENST00000440756.2:c.2238A>G
  hgvsp: ENST00000440756.2:c.2238A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000324127
  ensembl transcript: ENST00000327040
  gene symbol: PSD3
  hgvsc: ENST00000327040.8:c.2232A>G
  hgvsp: ENST00000327040.8:c.2232A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000430640
  ensembl transcript: ENST00000523619
  gene symbol: PSD3
  hgvsc: ENST00000523619.1:c.2037A>G
  hgvsp: ENST00000523619.1:c.2037A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000428889
  ensembl transcript: ENST00000518315
  gene symbol: PSD3
  hgvsc: ENST00000518315.1:c.*238A>G
  variant of: http://identifiers.org/hgnc/19093
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23381
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6026
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5423
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4527
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1080
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15710
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1337
  bin: 1.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 625
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 590
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8438
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 992
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1166
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 566
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 304
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Lys744Lys
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: African
population: South Asian
population: Other
population: East Asian
reference allele: T
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: InbreedingCoeff

8-18490301-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18490301
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 18490301
    reference: chr 8
allele count: 1
allele frequency: 8.964911337026877e-6
allele num: 111546
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000286485
  ensembl transcript: ENST00000286485
  gene symbol: PSD3
  hgvsc: ENST00000286485.8:c.630A>C
  hgvsp: ENSP00000286485.8:p.Lys210Asn
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000428889
  ensembl transcript: ENST00000518315
  gene symbol: PSD3
  hgvsc: ENST00000518315.1:c.*238A>C
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000393228
  ensembl transcript: ENST00000428502
  gene symbol: PSD3
  hgvsc: ENST00000428502.2:c.219A>C
  hgvsp: ENSP00000393228.2:p.Lys73Asn
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000430640
  ensembl transcript: ENST00000523619
  gene symbol: PSD3
  hgvsc: ENST00000523619.1:c.2037A>C
  hgvsp: ENSP00000430640.1:p.Lys679Asn
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000324127
  ensembl transcript: ENST00000327040
  gene symbol: PSD3
  hgvsc: ENST00000327040.8:c.2232A>C
  hgvsp: ENSP00000324127.8:p.Lys744Asn
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000401704
  ensembl transcript: ENST00000440756
  gene symbol: PSD3
  hgvsc: ENST00000440756.2:c.2238A>C
  hgvsp: ENSP00000401704.2:p.Lys746Asn
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl transcript: ENST00000521878
  gene symbol: PSD3
  hgvsc: ENST00000521878.1:n.225+51106A>C
  variant of: http://identifiers.org/hgnc/19093
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15710
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23381
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 496
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 338
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1080
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1337
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4527
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 144
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6026
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5423
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 278
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 304
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1089
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 224
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1166
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 625
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2922
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Lys744Asn
num of homozygotes: 0
population: Latino
population: Other
population: African
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: T
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum

8-18490305-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18490305
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 18490305
    reference: chr 8
allele count: 7
allele frequency: 6.4281516309139e-5
allele num: 108896
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000401704
  ensembl transcript: ENST00000440756
  gene symbol: PSD3
  hgvsc: ENST00000440756.2:c.2234A>C
  hgvsp: ENSP00000401704.2:p.Glu745Ala
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000324127
  ensembl transcript: ENST00000327040
  gene symbol: PSD3
  hgvsc: ENST00000327040.8:c.2228A>C
  hgvsp: ENSP00000324127.8:p.Glu743Ala
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000286485
  ensembl transcript: ENST00000286485
  gene symbol: PSD3
  hgvsc: ENST00000286485.8:c.626A>C
  hgvsp: ENSP00000286485.8:p.Glu209Ala
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl transcript: ENST00000521878
  gene symbol: PSD3
  hgvsc: ENST00000521878.1:n.225+51102A>C
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000428889
  ensembl transcript: ENST00000518315
  gene symbol: PSD3
  hgvsc: ENST00000518315.1:c.*234A>C
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000393228
  ensembl transcript: ENST00000428502
  gene symbol: PSD3
  hgvsc: ENST00000428502.2:c.215A>C
  hgvsp: ENSP00000393228.2:p.Glu72Ala
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000430640
  ensembl transcript: ENST00000523619
  gene symbol: PSD3
  hgvsc: ENST00000523619.1:c.2033A>C
  hgvsp: ENSP00000430640.1:p.Glu678Ala
  variant of: http://identifiers.org/hgnc/19093
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1783
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5702
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5171
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 986
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21124
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14848
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7783
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 387
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 596
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2922
  bin: 9.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 404
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 109
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1002
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1398
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 907
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Glu743Ala
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: East Asian
population: Latino
population: South Asian
reference allele: T
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum

8-18490308-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18490308
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 18490308
    reference: chr 8
allele count: 1
allele frequency: 9.264749481174029e-6
allele num: 107936
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000428889
  ensembl transcript: ENST00000518315
  gene symbol: PSD3
  hgvsc: ENST00000518315.1:c.*231A>C
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000393228
  ensembl transcript: ENST00000428502
  gene symbol: PSD3
  hgvsc: ENST00000428502.2:c.212A>C
  hgvsp: ENSP00000393228.2:p.Glu71Ala
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000401704
  ensembl transcript: ENST00000440756
  gene symbol: PSD3
  hgvsc: ENST00000440756.2:c.2231A>C
  hgvsp: ENSP00000401704.2:p.Glu744Ala
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000324127
  ensembl transcript: ENST00000327040
  gene symbol: PSD3
  hgvsc: ENST00000327040.8:c.2225A>C
  hgvsp: ENSP00000324127.8:p.Glu742Ala
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000430640
  ensembl transcript: ENST00000523619
  gene symbol: PSD3
  hgvsc: ENST00000523619.1:c.2030A>C
  hgvsp: ENSP00000430640.1:p.Glu677Ala
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl transcript: ENST00000521878
  gene symbol: PSD3
  hgvsc: ENST00000521878.1:n.225+51099A>C
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000286485
  ensembl transcript: ENST00000286485
  gene symbol: PSD3
  hgvsc: ENST00000286485.8:c.623A>C
  hgvsp: ENSP00000286485.8:p.Glu208Ala
  variant of: http://identifiers.org/hgnc/19093
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20164
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8691
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6136
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1928
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 482
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 944
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14848
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4655
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31340
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2915
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 999
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 468
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 977
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 412
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12333
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1491
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Glu742Ala
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: DP
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff

8-18490322-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18490322
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 18490322
    reference: chr 8
allele count: 1
allele frequency: 9.762002381928582e-6
allele num: 102438
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl transcript: ENST00000521878
  gene symbol: PSD3
  hgvsc: ENST00000521878.1:n.225+51085T>A
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000324127
  ensembl transcript: ENST00000327040
  gene symbol: PSD3
  hgvsc: ENST00000327040.8:c.2217-6T>A
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000286485
  ensembl transcript: ENST00000286485
  gene symbol: PSD3
  hgvsc: ENST00000286485.8:c.615-6T>A
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000428889
  ensembl transcript: ENST00000518315
  gene symbol: PSD3
  hgvsc: ENST00000518315.1:c.*223-6T>A
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000393228
  ensembl transcript: ENST00000428502
  gene symbol: PSD3
  hgvsc: ENST00000428502.2:c.204-6T>A
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000401704
  ensembl transcript: ENST00000440756
  gene symbol: PSD3
  hgvsc: ENST00000440756.2:c.2223-6T>A
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000430640
  ensembl transcript: ENST00000523619
  gene symbol: PSD3
  hgvsc: ENST00000523619.1:c.2022-6T>A
  variant of: http://identifiers.org/hgnc/19093
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2762
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 459
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13198
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8398
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 845
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 201
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3043
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14459
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14311
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 660
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1141
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2588
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 711
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 750
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 199
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18449
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 198
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 2.5e0
  variant carriers: 0
hgvs: c.2217-6T>A
num of homozygotes: 0
population: African
population: South Asian
population: Latino
population: East Asian
population: Other
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: DP

8-18490324-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18490324
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 18490324
    reference: chr 8
allele count: 7
allele frequency: 6.893699158968702e-5
allele num: 101542
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000324127
  ensembl transcript: ENST00000327040
  gene symbol: PSD3
  hgvsc: ENST00000327040.8:c.2217-8C>G
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000401704
  ensembl transcript: ENST00000440756
  gene symbol: PSD3
  hgvsc: ENST00000440756.2:c.2223-8C>G
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000430640
  ensembl transcript: ENST00000523619
  gene symbol: PSD3
  hgvsc: ENST00000523619.1:c.2022-8C>G
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000393228
  ensembl transcript: ENST00000428502
  gene symbol: PSD3
  hgvsc: ENST00000428502.2:c.204-8C>G
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000428889
  ensembl transcript: ENST00000518315
  gene symbol: PSD3
  hgvsc: ENST00000518315.1:c.*223-8C>G
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl transcript: ENST00000521878
  gene symbol: PSD3
  hgvsc: ENST00000521878.1:n.225+51083C>G
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000286485
  ensembl transcript: ENST00000286485
  gene symbol: PSD3
  hgvsc: ENST00000286485.8:c.615-8C>G
  variant of: http://identifiers.org/hgnc/19093
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8721
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2877
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13514
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 457
  bin: 4.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 860
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 830
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15537
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12544
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 159
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2899
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 264
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 952
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2872
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 671
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 700
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2909
  bin: 9.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 2781
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2667
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 163
  bin: 1.25e1
  variant carriers: 0
hgvs: c.2217-8C>G
num of homozygotes: 0
population: Latino
population: African
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: VQSLOD

8-18490325-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18490325
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 18490325
    reference: chr 8
allele count: 24
allele frequency: 2.372104056297936e-4
allele num: 101176
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000393228
  ensembl transcript: ENST00000428502
  gene symbol: PSD3
  hgvsc: ENST00000428502.2:c.204-9C>G
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000324127
  ensembl transcript: ENST00000327040
  gene symbol: PSD3
  hgvsc: ENST00000327040.8:c.2217-9C>G
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000430640
  ensembl transcript: ENST00000523619
  gene symbol: PSD3
  hgvsc: ENST00000523619.1:c.2022-9C>G
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000428889
  ensembl transcript: ENST00000518315
  gene symbol: PSD3
  hgvsc: ENST00000518315.1:c.*223-9C>G
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl transcript: ENST00000521878
  gene symbol: PSD3
  hgvsc: ENST00000521878.1:n.225+51082C>G
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000286485
  ensembl transcript: ENST00000286485
  gene symbol: PSD3
  hgvsc: ENST00000286485.8:c.615-9C>G
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000401704
  ensembl transcript: ENST00000440756
  gene symbol: PSD3
  hgvsc: ENST00000440756.2:c.2223-9C>G
  variant of: http://identifiers.org/hgnc/19093
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 903
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 823
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 15989
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 12252
  bin: 2.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 2954
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 13188
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 456
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8884
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2786
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 571
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1199
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22443
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2762
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2920
  bin: 9.75e1
  variant carriers: 22
genotype quality: GenotypeQuality
  all individuals: 168
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 995
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 195
  bin: 8.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2880
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2818
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
population: European (Finnish)
population: Latino
reference allele: G
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: VQSLOD
site quality: QD
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff

8-18490331-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18490331
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 18490331
    reference: chr 8
allele count: 13
allele frequency: 1.315682940652579e-4
allele num: 98808
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000430640
  ensembl transcript: ENST00000523619
  gene symbol: PSD3
  hgvsc: ENST00000523619.1:c.2022-15C>G
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000286485
  ensembl transcript: ENST00000286485
  gene symbol: PSD3
  hgvsc: ENST00000286485.8:c.615-15C>G
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000324127
  ensembl transcript: ENST00000327040
  gene symbol: PSD3
  hgvsc: ENST00000327040.8:c.2217-15C>G
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000428889
  ensembl transcript: ENST00000518315
  gene symbol: PSD3
  hgvsc: ENST00000518315.1:c.*223-15C>G
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000401704
  ensembl transcript: ENST00000440756
  gene symbol: PSD3
  hgvsc: ENST00000440756.2:c.2223-15C>G
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000393228
  ensembl transcript: ENST00000428502
  gene symbol: PSD3
  hgvsc: ENST00000428502.2:c.204-15C>G
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl transcript: ENST00000521878
  gene symbol: PSD3
  hgvsc: ENST00000521878.1:n.225+51076C>G
  variant of: http://identifiers.org/hgnc/19093
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9609
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3628
  bin: 1.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10402
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 810
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11037
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1230
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18535
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 454
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2522
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1436
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 467
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22152
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3428
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18937
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 238
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 186
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3441
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 161
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2429
  bin: 6.75e1
  variant carriers: 1
num of homozygotes: 0
population: African
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: G
site quality: VQSLOD
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum

8-18490334-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18490334
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 18490334
    reference: chr 8
allele count: 1
allele frequency: 1.026989278231935e-5
allele num: 97372
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000428889
  ensembl transcript: ENST00000518315
  gene symbol: PSD3
  hgvsc: ENST00000518315.1:c.*223-18G>C
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000430640
  ensembl transcript: ENST00000523619
  gene symbol: PSD3
  hgvsc: ENST00000523619.1:c.2022-18G>C
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000401704
  ensembl transcript: ENST00000440756
  gene symbol: PSD3
  hgvsc: ENST00000440756.2:c.2223-18G>C
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000286485
  ensembl transcript: ENST00000286485
  gene symbol: PSD3
  hgvsc: ENST00000286485.8:c.615-18G>C
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000393228
  ensembl transcript: ENST00000428502
  gene symbol: PSD3
  hgvsc: ENST00000428502.2:c.204-18G>C
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl transcript: ENST00000521878
  gene symbol: PSD3
  hgvsc: ENST00000521878.1:n.225+51073G>C
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000324127
  ensembl transcript: ENST00000327040
  gene symbol: PSD3
  hgvsc: ENST00000327040.8:c.2217-18G>C
  variant of: http://identifiers.org/hgnc/19093
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 20048
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4161
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1466
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9049
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10018
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2379
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9847
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 511
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2157
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 183
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3848
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 334
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 470
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23372
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 369
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 299
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: African
reference allele: C
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum

8-18490334-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18490334
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 18490334
    reference: chr 8
allele count: 1
allele frequency: 1.026989278231935e-5
allele num: 97372
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000393228
  ensembl transcript: ENST00000428502
  gene symbol: PSD3
  hgvsc: ENST00000428502.2:c.204-18G>A
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000401704
  ensembl transcript: ENST00000440756
  gene symbol: PSD3
  hgvsc: ENST00000440756.2:c.2223-18G>A
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000286485
  ensembl transcript: ENST00000286485
  gene symbol: PSD3
  hgvsc: ENST00000286485.8:c.615-18G>A
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000430640
  ensembl transcript: ENST00000523619
  gene symbol: PSD3
  hgvsc: ENST00000523619.1:c.2022-18G>A
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000324127
  ensembl transcript: ENST00000327040
  gene symbol: PSD3
  hgvsc: ENST00000327040.8:c.2217-18G>A
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl transcript: ENST00000521878
  gene symbol: PSD3
  hgvsc: ENST00000521878.1:n.225+51073G>A
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000428889
  ensembl transcript: ENST00000518315
  gene symbol: PSD3
  hgvsc: ENST00000518315.1:c.*223-18G>A
  variant of: http://identifiers.org/hgnc/19093
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 160
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4161
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 569
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1466
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9049
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 799
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2379
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 452
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 20048
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 134
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10018
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9847
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 143
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 299
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2157
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3833
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16793
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 382
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 418
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1692
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 190
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23372
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3848
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Latino
population: Other
reference allele: C
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: VQSLOD

8-18490347-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18490347
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 18490347
    reference: chr 8
allele count: 378
allele frequency: 4.114778368022294e-3
allele num: 91864
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000393228
  ensembl transcript: ENST00000428502
  gene symbol: PSD3
  hgvsc: ENST00000428502.2:c.204-31T>C
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000430640
  ensembl transcript: ENST00000523619
  gene symbol: PSD3
  hgvsc: ENST00000523619.1:c.2022-31T>C
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000324127
  ensembl transcript: ENST00000327040
  gene symbol: PSD3
  hgvsc: ENST00000327040.8:c.2217-31T>C
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000428889
  ensembl transcript: ENST00000518315
  gene symbol: PSD3
  hgvsc: ENST00000518315.1:c.*223-31T>C
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000401704
  ensembl transcript: ENST00000440756
  gene symbol: PSD3
  hgvsc: ENST00000440756.2:c.2223-31T>C
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl transcript: ENST00000521878
  gene symbol: PSD3
  hgvsc: ENST00000521878.1:n.225+51060T>C
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000286485
  ensembl transcript: ENST00000286485
  gene symbol: PSD3
  hgvsc: ENST00000286485.8:c.615-31T>C
  variant of: http://identifiers.org/hgnc/19093
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 7.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 213
  bin: 5.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 4.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 4397
  bin: 2.25e1
  variant carriers: 55
genotype depth: GenotypeDepth
  all individuals: 11349
  bin: 7.5e0
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 9.75e1
  variant carriers: 46
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 7.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 6900
  bin: 1.75e1
  variant carriers: 82
genotype depth: GenotypeDepth
  all individuals: 24159
  bin: 1.25e1
  variant carriers: 67
genotype depth: GenotypeDepth
  all individuals: 145
  bin: 8.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 6.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2844
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 768
  bin: 3.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 127
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1811
  bin: 3.25e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 6.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 5400
  bin: 2.75e1
  variant carriers: 41
genotype depth: GenotypeDepth
  all individuals: 204
  bin: 5.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 319
  bin: 4.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 24736
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3213
  bin: 9.75e1
  variant carriers: 378
genotype quality: GenotypeQuality
  all individuals: 8097
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 951
  bin: 1.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 5.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 388
  bin: 8.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2909
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 220
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6075
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 889
  bin: 1.75e1
  variant carriers: 2
num of homozygotes: 3
population: European (Non-Finnish)
population: East Asian
population: Latino
population: South Asian
population: Other
population: European (Finnish)
population: African
reference allele: A
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum

http://identifiers.org/exac.variant/8-18490351-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18490351
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 18490351
    reference: chr 8
allele count: 5
allele frequency: 5.723967396281711e-5
allele num: 87352
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl transcript: ENST00000521878
  gene symbol: PSD3
  hgvsc: ENST00000521878.1:n.225+51056T>G
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000324127
  ensembl transcript: ENST00000327040
  gene symbol: PSD3
  hgvsc: ENST00000327040.8:c.2217-35T>G
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000286485
  ensembl transcript: ENST00000286485
  gene symbol: PSD3
  hgvsc: ENST00000286485.8:c.615-35T>G
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000430640
  ensembl transcript: ENST00000523619
  gene symbol: PSD3
  hgvsc: ENST00000523619.1:c.2022-35T>G
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000401704
  ensembl transcript: ENST00000440756
  gene symbol: PSD3
  hgvsc: ENST00000440756.2:c.2223-35T>G
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000393228
  ensembl transcript: ENST00000428502
  gene symbol: PSD3
  hgvsc: ENST00000428502.2:c.204-35T>G
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000428889
  ensembl transcript: ENST00000518315
  gene symbol: PSD3
  hgvsc: ENST00000518315.1:c.*223-35T>G
  variant of: http://identifiers.org/hgnc/19093
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3838
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8289
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3494
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23884
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1571
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12369
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3376
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1942
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4391
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 427
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 988
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5439
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 953
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3621
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1758
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 171
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2906
  bin: 9.75e1
  variant carriers: 4
num of homozygotes: 0
population: South Asian
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: A
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: DP
site quality: BaseQRankSum

8-18490351-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18490351
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 18490351
    reference: chr 8
allele count: 12
allele frequency: 1.37375217510761e-4
allele num: 87352
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl transcript: ENST00000521878
  gene symbol: PSD3
  hgvsc: ENST00000521878.1:n.225+51056T>C
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000428889
  ensembl transcript: ENST00000518315
  gene symbol: PSD3
  hgvsc: ENST00000518315.1:c.*223-35T>C
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000401704
  ensembl transcript: ENST00000440756
  gene symbol: PSD3
  hgvsc: ENST00000440756.2:c.2223-35T>C
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000286485
  ensembl transcript: ENST00000286485
  gene symbol: PSD3
  hgvsc: ENST00000286485.8:c.615-35T>C
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000430640
  ensembl transcript: ENST00000523619
  gene symbol: PSD3
  hgvsc: ENST00000523619.1:c.2022-35T>C
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000324127
  ensembl transcript: ENST00000327040
  gene symbol: PSD3
  hgvsc: ENST00000327040.8:c.2217-35T>C
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000393228
  ensembl transcript: ENST00000428502
  gene symbol: PSD3
  hgvsc: ENST00000428502.2:c.204-35T>C
  variant of: http://identifiers.org/hgnc/19093
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8289
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 157
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 208
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1571
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3494
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12369
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3838
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 130
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 161
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23884
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 3376
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 443
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 754
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 609
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 988
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1942
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2906
  bin: 9.75e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 22929
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3621
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4391
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 354
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6746
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 266
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5019
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: A
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: DP
site quality: VQSLOD

8-18490356-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18490356
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 18490356
    reference: chr 8
allele count: 8221
allele frequency: 1.023964327529084e-1
allele num: 80286
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000393228
  ensembl transcript: ENST00000428502
  gene symbol: PSD3
  hgvsc: ENST00000428502.2:c.204-40A>G
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000324127
  ensembl transcript: ENST00000327040
  gene symbol: PSD3
  hgvsc: ENST00000327040.8:c.2217-40A>G
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000401704
  ensembl transcript: ENST00000440756
  gene symbol: PSD3
  hgvsc: ENST00000440756.2:c.2223-40A>G
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000286485
  ensembl transcript: ENST00000286485
  gene symbol: PSD3
  hgvsc: ENST00000286485.8:c.615-40A>G
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000428889
  ensembl transcript: ENST00000518315
  gene symbol: PSD3
  hgvsc: ENST00000518315.1:c.*223-40A>G
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl transcript: ENST00000521878
  gene symbol: PSD3
  hgvsc: ENST00000521878.1:n.225+51051A>G
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000430640
  ensembl transcript: ENST00000523619
  gene symbol: PSD3
  hgvsc: ENST00000523619.1:c.2022-40A>G
  variant of: http://identifiers.org/hgnc/19093
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 832
  bin: 9.75e1
  variant carriers: 368
genotype depth: GenotypeDepth
  all individuals: 313
  bin: 4.75e1
  variant carriers: 81
genotype depth: GenotypeDepth
  all individuals: 224
  bin: 5.25e1
  variant carriers: 62
genotype depth: GenotypeDepth
  all individuals: 135
  bin: 8.75e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 3839
  bin: 2.5e0
  variant carriers: 55
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 5.75e1
  variant carriers: 51
genotype depth: GenotypeDepth
  all individuals: 1252
  bin: 3.25e1
  variant carriers: 247
genotype depth: GenotypeDepth
  all individuals: 9558
  bin: 1.75e1
  variant carriers: 2231
genotype depth: GenotypeDepth
  all individuals: 710
  bin: 3.75e1
  variant carriers: 164
genotype depth: GenotypeDepth
  all individuals: 2447
  bin: 2.75e1
  variant carriers: 452
genotype depth: GenotypeDepth
  all individuals: 21425
  bin: 1.25e1
  variant carriers: 2667
genotype depth: GenotypeDepth
  all individuals: 15129
  bin: 7.5e0
  variant carriers: 1262
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 6.75e1
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 148
  bin: 7.75e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 4.25e1
  variant carriers: 109
genotype depth: GenotypeDepth
  all individuals: 2764
  bin: 2.25e1
  variant carriers: 1100
genotype depth: GenotypeDepth
  all individuals: 121
  bin: 9.25e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 6.25e1
  variant carriers: 37
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 7.25e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 8.25e1
  variant carriers: 21
genotype quality: GenotypeQuality
  all individuals: 703
  bin: 6.75e1
  variant carriers: 79
genotype quality: GenotypeQuality
  all individuals: 17464
  bin: 2.25e1
  variant carriers: 57
genotype quality: GenotypeQuality
  all individuals: 3112
  bin: 1.75e1
  variant carriers: 73
genotype quality: GenotypeQuality
  all individuals: 1093
  bin: 4.75e1
  variant carriers: 130
genotype quality: GenotypeQuality
  all individuals: 1186
  bin: 2.5e0
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 5007
  bin: 7.5e0
  variant carriers: 43
genotype quality: GenotypeQuality
  all individuals: 2716
  bin: 1.25e1
  variant carriers: 54
genotype quality: GenotypeQuality
  all individuals: 480
  bin: 8.25e1
  variant carriers: 188
genotype quality: GenotypeQuality
  all individuals: 444
  bin: 5.25e1
  variant carriers: 153
genotype quality: GenotypeQuality
  all individuals: 286
  bin: 7.25e1
  variant carriers: 60
num of homozygotes: 555
population: European (Finnish)
population: Latino
population: East Asian
population: African
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: T
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff

8-18490358-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18490358
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 18490358
    reference: chr 8
allele count: 2
allele frequency: 2.586920529801325e-5
allele num: 77312
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000393228
  ensembl transcript: ENST00000428502
  gene symbol: PSD3
  hgvsc: ENST00000428502.2:c.204-42T>C
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000401704
  ensembl transcript: ENST00000440756
  gene symbol: PSD3
  hgvsc: ENST00000440756.2:c.2223-42T>C
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000428889
  ensembl transcript: ENST00000518315
  gene symbol: PSD3
  hgvsc: ENST00000518315.1:c.*223-42T>C
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000286485
  ensembl transcript: ENST00000286485
  gene symbol: PSD3
  hgvsc: ENST00000286485.8:c.615-42T>C
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000324127
  ensembl transcript: ENST00000327040
  gene symbol: PSD3
  hgvsc: ENST00000327040.8:c.2217-42T>C
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000430640
  ensembl transcript: ENST00000523619
  gene symbol: PSD3
  hgvsc: ENST00000523619.1:c.2022-42T>C
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl transcript: ENST00000521878
  gene symbol: PSD3
  hgvsc: ENST00000521878.1:n.225+51049T>C
  variant of: http://identifiers.org/hgnc/19093
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 633
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1137
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16597
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4426
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8431
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2262
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2123
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 21832
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1137
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 154
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20325
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1244
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5906
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3700
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 221
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5205
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 127
  bin: 5.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
population: South Asian
population: East Asian
population: African
population: Other
reference allele: A
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: FS
site quality: DP

http://identifiers.org/exac.variant/8-18490360-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18490360
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 18490360
    reference: chr 8
allele count: 2
allele frequency: 2.626602227358689e-5
allele num: 76144
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl transcript: ENST00000521878
  gene symbol: PSD3
  hgvsc: ENST00000521878.1:n.225+51047T>G
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000430640
  ensembl transcript: ENST00000523619
  gene symbol: PSD3
  hgvsc: ENST00000523619.1:c.2022-44T>G
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000401704
  ensembl transcript: ENST00000440756
  gene symbol: PSD3
  hgvsc: ENST00000440756.2:c.2223-44T>G
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000393228
  ensembl transcript: ENST00000428502
  gene symbol: PSD3
  hgvsc: ENST00000428502.2:c.204-44T>G
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000428889
  ensembl transcript: ENST00000518315
  gene symbol: PSD3
  hgvsc: ENST00000518315.1:c.*223-44T>G
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000324127
  ensembl transcript: ENST00000327040
  gene symbol: PSD3
  hgvsc: ENST00000327040.8:c.2217-44T>G
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000286485
  ensembl transcript: ENST00000286485
  gene symbol: PSD3
  hgvsc: ENST00000286485.8:c.615-44T>G
  variant of: http://identifiers.org/hgnc/19093
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2107
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8298
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21334
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4455
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17210
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2328
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1359
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1191
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 637
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4013
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 269
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3537
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19700
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 401
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5175
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: East Asian
population: Other
reference allele: A
site quality: ClippingRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: MQ
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum

8-18490360-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18490360
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 18490360
    reference: chr 8
allele count: 9
allele frequency: 1.18197100231141e-4
allele num: 76144
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000393228
  ensembl transcript: ENST00000428502
  gene symbol: PSD3
  hgvsc: ENST00000428502.2:c.204-44T>C
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000286485
  ensembl transcript: ENST00000286485
  gene symbol: PSD3
  hgvsc: ENST00000286485.8:c.615-44T>C
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000430640
  ensembl transcript: ENST00000523619
  gene symbol: PSD3
  hgvsc: ENST00000523619.1:c.2022-44T>C
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000428889
  ensembl transcript: ENST00000518315
  gene symbol: PSD3
  hgvsc: ENST00000518315.1:c.*223-44T>C
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000324127
  ensembl transcript: ENST00000327040
  gene symbol: PSD3
  hgvsc: ENST00000327040.8:c.2217-44T>C
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000401704
  ensembl transcript: ENST00000440756
  gene symbol: PSD3
  hgvsc: ENST00000440756.2:c.2223-44T>C
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl transcript: ENST00000521878
  gene symbol: PSD3
  hgvsc: ENST00000521878.1:n.225+51047T>C
  variant of: http://identifiers.org/hgnc/19093
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 21334
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1070
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8298
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2328
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 625
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 17210
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4455
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 380
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2107
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 19700
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 269
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3537
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 155
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 724
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 401
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5175
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 637
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5993
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: African
reference allele: A
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: QD

8-18490366-CAAAGA-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18490366
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 18490361
    reference: chr 8
allele count: 1
allele frequency: 1.456197576887232e-5
allele num: 68672
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl transcript: ENST00000521878
  gene symbol: PSD3
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000324127
  ensembl transcript: ENST00000327040
  gene symbol: PSD3
  hgvsc: ENST00000327040.8:c.2217-55_2217-51delTCTTT
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000393228
  ensembl transcript: ENST00000428502
  gene symbol: PSD3
  hgvsc: ENST00000428502.2:c.204-55_204-51delTCTTT
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000430640
  ensembl transcript: ENST00000523619
  gene symbol: PSD3
  hgvsc: ENST00000523619.1:c.2022-55_2022-51delTCTTT
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000286485
  ensembl transcript: ENST00000286485
  gene symbol: PSD3
  hgvsc: ENST00000286485.8:c.615-55_615-51delTCTTT
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000428889
  ensembl transcript: ENST00000518315
  gene symbol: PSD3
  hgvsc: ENST00000518315.1:c.*223-55_*223-51delTCTTT
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000401704
  ensembl transcript: ENST00000440756
  gene symbol: PSD3
  hgvsc: ENST00000440756.2:c.2223-55_2223-51delTCTTT
  variant of: http://identifiers.org/hgnc/19093
canonical: true
consequence: intron
filter: VQSRTrancheINDEL97.00to99.00
genotype depth: GenotypeDepth
  all individuals: 1579
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7966
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4546
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 379
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3051
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 866
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 19781
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 599
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 129
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 128
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 18982
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 194
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1464
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7872
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6604
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2924
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3868
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 338
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 954
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5903
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1275
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 373
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
reference allele: CAAAGA
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: QD
site quality: MQ
site quality: ClippingRankSum

8-18513113-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18513113
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 18513113
    reference: chr 8
allele count: 1
allele frequency: 8.287613333112331e-6
allele num: 120662
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000428889
  ensembl transcript: ENST00000518315
  gene symbol: PSD3
  hgvsc: ENST00000518315.1:c.*222+39C>T
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000286485
  ensembl transcript: ENST00000286485
  gene symbol: PSD3
  hgvsc: ENST00000286485.8:c.614+39C>T
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000393228
  ensembl transcript: ENST00000428502
  gene symbol: PSD3
  hgvsc: ENST00000428502.2:c.203+39C>T
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000430640
  ensembl transcript: ENST00000523619
  gene symbol: PSD3
  hgvsc: ENST00000523619.1:c.2021+39C>T
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000401704
  ensembl transcript: ENST00000440756
  gene symbol: PSD3
  hgvsc: ENST00000440756.2:c.2222+39C>T
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000324127
  ensembl transcript: ENST00000327040
  gene symbol: PSD3
  hgvsc: ENST00000327040.8:c.2216+39C>T
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl transcript: ENST00000521878
  gene symbol: PSD3
  hgvsc: ENST00000521878.1:n.225+28294C>T
  variant of: http://identifiers.org/hgnc/19093
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 826
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 17
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1566
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1158
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12485
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6430
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5165
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 340
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 402
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2407
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1369
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4071
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8983
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12633
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12542
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 425
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 202
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 203
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: Latino
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
reference allele: G
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: DP

http://identifiers.org/exac.variant/8-18513120-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18513120
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 18513120
    reference: chr 8
allele count: 1
allele frequency: 8.287338604080686e-6
allele num: 120666
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000428889
  ensembl transcript: ENST00000518315
  gene symbol: PSD3
  hgvsc: ENST00000518315.1:c.*222+32T>G
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl transcript: ENST00000521878
  gene symbol: PSD3
  hgvsc: ENST00000521878.1:n.225+28287T>G
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000430640
  ensembl transcript: ENST00000523619
  gene symbol: PSD3
  hgvsc: ENST00000523619.1:c.2021+32T>G
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000401704
  ensembl transcript: ENST00000440756
  gene symbol: PSD3
  hgvsc: ENST00000440756.2:c.2222+32T>G
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000393228
  ensembl transcript: ENST00000428502
  gene symbol: PSD3
  hgvsc: ENST00000428502.2:c.203+32T>G
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000286485
  ensembl transcript: ENST00000286485
  gene symbol: PSD3
  hgvsc: ENST00000286485.8:c.614+32T>G
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000324127
  ensembl transcript: ENST00000327040
  gene symbol: PSD3
  hgvsc: ENST00000327040.8:c.2216+32T>G
  variant of: http://identifiers.org/hgnc/19093
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5284
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2407
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6431
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4070
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12782
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1158
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8986
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1567
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1370
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 826
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12523
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 430
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12892
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
reference allele: A
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: DP
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum

8-18513120-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18513120
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 18513120
    reference: chr 8
allele count: 3
allele frequency: 2.486201581224206e-5
allele num: 120666
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000393228
  ensembl transcript: ENST00000428502
  gene symbol: PSD3
  hgvsc: ENST00000428502.2:c.203+32T>C
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000286485
  ensembl transcript: ENST00000286485
  gene symbol: PSD3
  hgvsc: ENST00000286485.8:c.614+32T>C
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000430640
  ensembl transcript: ENST00000523619
  gene symbol: PSD3
  hgvsc: ENST00000523619.1:c.2021+32T>C
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000324127
  ensembl transcript: ENST00000327040
  gene symbol: PSD3
  hgvsc: ENST00000327040.8:c.2216+32T>C
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl transcript: ENST00000521878
  gene symbol: PSD3
  hgvsc: ENST00000521878.1:n.225+28287T>C
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000401704
  ensembl transcript: ENST00000440756
  gene symbol: PSD3
  hgvsc: ENST00000440756.2:c.2222+32T>C
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000428889
  ensembl transcript: ENST00000518315
  gene symbol: PSD3
  hgvsc: ENST00000518315.1:c.*222+32T>C
  variant of: http://identifiers.org/hgnc/19093
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 199
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6431
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1158
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1370
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 334
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5284
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12523
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8986
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12782
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 350
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1567
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4070
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 826
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2407
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 135
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 430
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5197
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20570
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 115
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Other
population: South Asian
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: East Asian
reference allele: A
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum

8-18513130-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18513130
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 18513130
    reference: chr 8
allele count: 3
allele frequency: 2.486407638244265e-5
allele num: 120656
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000286485
  ensembl transcript: ENST00000286485
  gene symbol: PSD3
  hgvsc: ENST00000286485.8:c.614+22C>G
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl transcript: ENST00000521878
  gene symbol: PSD3
  hgvsc: ENST00000521878.1:n.225+28277C>G
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000428889
  ensembl transcript: ENST00000518315
  gene symbol: PSD3
  hgvsc: ENST00000518315.1:c.*222+22C>G
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000324127
  ensembl transcript: ENST00000327040
  gene symbol: PSD3
  hgvsc: ENST00000327040.8:c.2216+22C>G
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000393228
  ensembl transcript: ENST00000428502
  gene symbol: PSD3
  hgvsc: ENST00000428502.2:c.203+22C>G
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000401704
  ensembl transcript: ENST00000440756
  gene symbol: PSD3
  hgvsc: ENST00000440756.2:c.2222+22C>G
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000430640
  ensembl transcript: ENST00000523619
  gene symbol: PSD3
  hgvsc: ENST00000523619.1:c.2021+22C>G
  variant of: http://identifiers.org/hgnc/19093
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12882
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6430
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1567
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1369
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4068
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12539
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 231
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 826
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5384
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 79
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8987
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1159
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2409
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3708
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20570
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 439
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: Latino
population: East Asian
population: African
reference allele: G
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: QD

8-18513134-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18513134
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 18513134
    reference: chr 8
allele count: 1
allele frequency: 8.289124668435012e-6
allele num: 120640
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000324127
  ensembl transcript: ENST00000327040
  gene symbol: PSD3
  hgvsc: ENST00000327040.8:c.2216+18C>T
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000393228
  ensembl transcript: ENST00000428502
  gene symbol: PSD3
  hgvsc: ENST00000428502.2:c.203+18C>T
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl transcript: ENST00000521878
  gene symbol: PSD3
  hgvsc: ENST00000521878.1:n.225+28273C>T
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000428889
  ensembl transcript: ENST00000518315
  gene symbol: PSD3
  hgvsc: ENST00000518315.1:c.*222+18C>T
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000401704
  ensembl transcript: ENST00000440756
  gene symbol: PSD3
  hgvsc: ENST00000440756.2:c.2222+18C>T
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000430640
  ensembl transcript: ENST00000523619
  gene symbol: PSD3
  hgvsc: ENST00000523619.1:c.2021+18C>T
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000286485
  ensembl transcript: ENST00000286485
  gene symbol: PSD3
  hgvsc: ENST00000286485.8:c.614+18C>T
  variant of: http://identifiers.org/hgnc/19093
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5398
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6430
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12550
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1567
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 202
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2408
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 826
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12904
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1369
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1159
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8987
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4067
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20570
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 450
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3403
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13233
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5195
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
population: Latino
population: African
population: European (Finnish)
reference allele: G
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: InbreedingCoeff
site quality: QD

8-18513135-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18513135
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 18513135
    reference: chr 8
allele count: 1
allele frequency: 8.289124668435012e-6
allele num: 120640
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000401704
  ensembl transcript: ENST00000440756
  gene symbol: PSD3
  hgvsc: ENST00000440756.2:c.2222+17T>C
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000428889
  ensembl transcript: ENST00000518315
  gene symbol: PSD3
  hgvsc: ENST00000518315.1:c.*222+17T>C
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000430640
  ensembl transcript: ENST00000523619
  gene symbol: PSD3
  hgvsc: ENST00000523619.1:c.2021+17T>C
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl transcript: ENST00000521878
  gene symbol: PSD3
  hgvsc: ENST00000521878.1:n.225+28272T>C
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000393228
  ensembl transcript: ENST00000428502
  gene symbol: PSD3
  hgvsc: ENST00000428502.2:c.203+17T>C
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000286485
  ensembl transcript: ENST00000286485
  gene symbol: PSD3
  hgvsc: ENST00000286485.8:c.614+17T>C
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000324127
  ensembl transcript: ENST00000327040
  gene symbol: PSD3
  hgvsc: ENST00000327040.8:c.2216+17T>C
  variant of: http://identifiers.org/hgnc/19093
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8984
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12904
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 52
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5396
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4068
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1567
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 826
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12551
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2409
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1159
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1369
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6433
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3707
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 0
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20569
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 60
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: Latino
population: Other
population: African
reference allele: A
site quality: MQRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: QD

8-18513136-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18513136
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 18513136
    reference: chr 8
allele count: 1
allele frequency: 8.289811821271656e-6
allele num: 120630
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000401704
  ensembl transcript: ENST00000440756
  gene symbol: PSD3
  hgvsc: ENST00000440756.2:c.2222+16G>A
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000393228
  ensembl transcript: ENST00000428502
  gene symbol: PSD3
  hgvsc: ENST00000428502.2:c.203+16G>A
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000286485
  ensembl transcript: ENST00000286485
  gene symbol: PSD3
  hgvsc: ENST00000286485.8:c.614+16G>A
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000324127
  ensembl transcript: ENST00000327040
  gene symbol: PSD3
  hgvsc: ENST00000327040.8:c.2216+16G>A
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000428889
  ensembl transcript: ENST00000518315
  gene symbol: PSD3
  hgvsc: ENST00000518315.1:c.*222+16G>A
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl transcript: ENST00000521878
  gene symbol: PSD3
  hgvsc: ENST00000521878.1:n.225+28271G>A
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000430640
  ensembl transcript: ENST00000523619
  gene symbol: PSD3
  hgvsc: ENST00000523619.1:c.2021+16G>A
  variant of: http://identifiers.org/hgnc/19093
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2409
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 192
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5397
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1567
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12552
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4067
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 49
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8990
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 371
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12907
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1159
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1369
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6434
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 826
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5194
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 451
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3400
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Latino
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
reference allele: C
site quality: QD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: VQSLOD

8-18513137-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18513137
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 18513137
    reference: chr 8
allele count: 2
allele frequency: 1.657879903179814e-5
allele num: 120636
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl transcript: ENST00000521878
  gene symbol: PSD3
  hgvsc: ENST00000521878.1:n.225+28270C>T
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000430640
  ensembl transcript: ENST00000523619
  gene symbol: PSD3
  hgvsc: ENST00000523619.1:c.2021+15C>T
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000324127
  ensembl transcript: ENST00000327040
  gene symbol: PSD3
  hgvsc: ENST00000327040.8:c.2216+15C>T
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000393228
  ensembl transcript: ENST00000428502
  gene symbol: PSD3
  hgvsc: ENST00000428502.2:c.203+15C>T
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000286485
  ensembl transcript: ENST00000286485
  gene symbol: PSD3
  hgvsc: ENST00000286485.8:c.614+15C>T
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000428889
  ensembl transcript: ENST00000518315
  gene symbol: PSD3
  hgvsc: ENST00000518315.1:c.*222+15C>T
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000401704
  ensembl transcript: ENST00000440756
  gene symbol: PSD3
  hgvsc: ENST00000440756.2:c.2222+15C>T
  variant of: http://identifiers.org/hgnc/19093
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1567
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 372
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2410
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4067
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1159
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12558
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6431
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8985
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5393
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12920
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1370
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 38
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3399
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 458
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4662
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
population: European (Finnish)
reference allele: G
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum

8-18513142-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18513142
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 18513142
    reference: chr 8
allele count: 1
allele frequency: 8.290086714307032e-6
allele num: 120626
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000428889
  ensembl transcript: ENST00000518315
  gene symbol: PSD3
  hgvsc: ENST00000518315.1:c.*222+10C>A
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000286485
  ensembl transcript: ENST00000286485
  gene symbol: PSD3
  hgvsc: ENST00000286485.8:c.614+10C>A
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000393228
  ensembl transcript: ENST00000428502
  gene symbol: PSD3
  hgvsc: ENST00000428502.2:c.203+10C>A
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000401704
  ensembl transcript: ENST00000440756
  gene symbol: PSD3
  hgvsc: ENST00000440756.2:c.2222+10C>A
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000430640
  ensembl transcript: ENST00000523619
  gene symbol: PSD3
  hgvsc: ENST00000523619.1:c.2021+10C>A
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl transcript: ENST00000521878
  gene symbol: PSD3
  hgvsc: ENST00000521878.1:n.225+28265C>A
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000324127
  ensembl transcript: ENST00000327040
  gene symbol: PSD3
  hgvsc: ENST00000327040.8:c.2216+10C>A
  variant of: http://identifiers.org/hgnc/19093
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 33
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12939
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2413
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6428
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8986
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5388
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4068
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1567
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1369
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1159
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12554
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 465
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4663
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6819
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3400
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 19
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20569
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5197
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: African
population: Latino
reference allele: G
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: FS
site quality: QD

8-18513152-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18513152
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 18513152
    reference: chr 8
allele count: 1
allele frequency: 8.292148993333113e-6
allele num: 120596
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000324127
  ensembl transcript: ENST00000327040
  gene symbol: PSD3
  hgvsc: ENST00000327040.8:c.2216T>A
  hgvsp: ENSP00000324127.8:p.Val739Glu
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000393228
  ensembl transcript: ENST00000428502
  gene symbol: PSD3
  hgvsc: ENST00000428502.2:c.203T>A
  hgvsp: ENSP00000393228.2:p.Val68Glu
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000430640
  ensembl transcript: ENST00000523619
  gene symbol: PSD3
  hgvsc: ENST00000523619.1:c.2021T>A
  hgvsp: ENSP00000430640.1:p.Val674Glu
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000286485
  ensembl transcript: ENST00000286485
  gene symbol: PSD3
  hgvsc: ENST00000286485.8:c.614T>A
  hgvsp: ENSP00000286485.8:p.Val205Glu
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000401704
  ensembl transcript: ENST00000440756
  gene symbol: PSD3
  hgvsc: ENST00000440756.2:c.2222T>A
  hgvsp: ENSP00000401704.2:p.Val741Glu
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000428889
  ensembl transcript: ENST00000518315
  gene symbol: PSD3
  hgvsc: ENST00000518315.1:c.*222T>A
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl transcript: ENST00000521878
  gene symbol: PSD3
  hgvsc: ENST00000521878.1:n.225+28255T>A
  variant of: http://identifiers.org/hgnc/19093
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 203
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8988
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4067
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5323
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1567
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6427
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 389
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1159
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12963
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12556
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1369
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2410
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4665
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20568
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3400
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Val739Glu
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: East Asian
population: African
population: Latino
population: Other
population: European (Finnish)
reference allele: A
site quality: FS
site quality: ReadPosRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD

http://identifiers.org/exac.variant/8-18513153-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18513153
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 18513153
    reference: chr 8
allele count: 1
allele frequency: 8.29228651508367e-6
allele num: 120594
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000324127
  ensembl transcript: ENST00000327040
  gene symbol: PSD3
  hgvsc: ENST00000327040.8:c.2215G>T
  hgvsp: ENSP00000324127.8:p.Val739Leu
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000428889
  ensembl transcript: ENST00000518315
  gene symbol: PSD3
  hgvsc: ENST00000518315.1:c.*221G>T
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000286485
  ensembl transcript: ENST00000286485
  gene symbol: PSD3
  hgvsc: ENST00000286485.8:c.613G>T
  hgvsp: ENSP00000286485.8:p.Val205Leu
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000393228
  ensembl transcript: ENST00000428502
  gene symbol: PSD3
  hgvsc: ENST00000428502.2:c.202G>T
  hgvsp: ENSP00000393228.2:p.Val68Leu
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl transcript: ENST00000521878
  gene symbol: PSD3
  hgvsc: ENST00000521878.1:n.225+28254G>T
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000401704
  ensembl transcript: ENST00000440756
  gene symbol: PSD3
  hgvsc: ENST00000440756.2:c.2221G>T
  hgvsp: ENSP00000401704.2:p.Val741Leu
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000430640
  ensembl transcript: ENST00000523619
  gene symbol: PSD3
  hgvsc: ENST00000523619.1:c.2020G>T
  hgvsp: ENSP00000430640.1:p.Val674Leu
  variant of: http://identifiers.org/hgnc/19093
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4066
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2410
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5319
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12555
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 392
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1159
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6427
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12969
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1369
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8988
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1567
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2430
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6829
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4665
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 493
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.75e1
  variant carriers: 0
hgvs: p.Val739Leu
num of homozygotes: 0
population: African
population: European (Non-Finnish)
population: Latino
population: East Asian
population: European (Finnish)
population: Other
population: South Asian
reference allele: C
site quality: DP
site quality: ReadPosRankSum
site quality: FS
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum

8-18513160-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18513160
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 18513160
    reference: chr 8
allele count: 2
allele frequency: 1.65892501658925e-5
allele num: 120560
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl transcript: ENST00000521878
  gene symbol: PSD3
  hgvsc: ENST00000521878.1:n.225+28247A>G
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000324127
  ensembl transcript: ENST00000327040
  gene symbol: PSD3
  hgvsc: ENST00000327040.8:c.2208A>G
  hgvsp: ENST00000327040.8:c.2208A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000428889
  ensembl transcript: ENST00000518315
  gene symbol: PSD3
  hgvsc: ENST00000518315.1:c.*214A>G
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000393228
  ensembl transcript: ENST00000428502
  gene symbol: PSD3
  hgvsc: ENST00000428502.2:c.195A>G
  hgvsp: ENST00000428502.2:c.195A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000430640
  ensembl transcript: ENST00000523619
  gene symbol: PSD3
  hgvsc: ENST00000523619.1:c.2013A>G
  hgvsp: ENST00000523619.1:c.2013A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000286485
  ensembl transcript: ENST00000286485
  gene symbol: PSD3
  hgvsc: ENST00000286485.8:c.606A>G
  hgvsp: ENST00000286485.8:c.606A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000401704
  ensembl transcript: ENST00000440756
  gene symbol: PSD3
  hgvsc: ENST00000440756.2:c.2214A>G
  hgvsp: ENST00000440756.2:c.2214A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/19093
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1371
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6426
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1159
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12557
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8989
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2409
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 211
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 44
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 23
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4066
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5280
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 400
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1567
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12973
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 516
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3707
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 37
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Glu736Glu
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: Other
population: African
population: East Asian
population: European (Finnish)
reference allele: T
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP

8-18513165-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18513165
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 18513165
    reference: chr 8
allele count: 1
allele frequency: 8.296276631047985e-6
allele num: 120536
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000430640
  ensembl transcript: ENST00000523619
  gene symbol: PSD3
  hgvsc: ENST00000523619.1:c.2008C>G
  hgvsp: ENSP00000430640.1:p.Leu670Val
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000324127
  ensembl transcript: ENST00000327040
  gene symbol: PSD3
  hgvsc: ENST00000327040.8:c.2203C>G
  hgvsp: ENSP00000324127.8:p.Leu735Val
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000428889
  ensembl transcript: ENST00000518315
  gene symbol: PSD3
  hgvsc: ENST00000518315.1:c.*209C>G
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl transcript: ENST00000521878
  gene symbol: PSD3
  hgvsc: ENST00000521878.1:n.225+28242C>G
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000286485
  ensembl transcript: ENST00000286485
  gene symbol: PSD3
  hgvsc: ENST00000286485.8:c.601C>G
  hgvsp: ENSP00000286485.8:p.Leu201Val
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000393228
  ensembl transcript: ENST00000428502
  gene symbol: PSD3
  hgvsc: ENST00000428502.2:c.190C>G
  hgvsp: ENSP00000393228.2:p.Leu64Val
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000401704
  ensembl transcript: ENST00000440756
  gene symbol: PSD3
  hgvsc: ENST00000440756.2:c.2209C>G
  hgvsp: ENSP00000401704.2:p.Leu737Val
  variant of: http://identifiers.org/hgnc/19093
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 408
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4066
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1567
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5266
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12561
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 517
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8988
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 212
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 27
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2409
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1160
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12972
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1370
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6426
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6821
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4668
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3399
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 530
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Leu735Val
num of homozygotes: 0
population: European (Non-Finnish)
population: South Asian
population: Other
population: Latino
population: East Asian
population: African
population: European (Finnish)
reference allele: G
site quality: FS
site quality: BaseQRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: QD
site quality: ReadPosRankSum

8-18513181-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18513181
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 18513181
    reference: chr 8
allele count: 1
allele frequency: 8.301510874979247e-6
allele num: 120460
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000430640
  ensembl transcript: ENST00000523619
  gene symbol: PSD3
  hgvsc: ENST00000523619.1:c.1992A>T
  hgvsp: ENST00000523619.1:c.1992A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000393228
  ensembl transcript: ENST00000428502
  gene symbol: PSD3
  hgvsc: ENST00000428502.2:c.174A>T
  hgvsp: ENST00000428502.2:c.174A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl transcript: ENST00000521878
  gene symbol: PSD3
  hgvsc: ENST00000521878.1:n.225+28226A>T
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000324127
  ensembl transcript: ENST00000327040
  gene symbol: PSD3
  hgvsc: ENST00000327040.8:c.2187A>T
  hgvsp: ENST00000327040.8:c.2187A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000286485
  ensembl transcript: ENST00000286485
  gene symbol: PSD3
  hgvsc: ENST00000286485.8:c.585A>T
  hgvsp: ENST00000286485.8:c.585A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000401704
  ensembl transcript: ENST00000440756
  gene symbol: PSD3
  hgvsc: ENST00000440756.2:c.2193A>T
  hgvsp: ENST00000440756.2:c.2193A>T(p.%3D)
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000428889
  ensembl transcript: ENST00000518315
  gene symbol: PSD3
  hgvsc: ENST00000518315.1:c.*193A>T
  variant of: http://identifiers.org/hgnc/19093
canonical: true
consequence: synonymous
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1567
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1160
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12977
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6427
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 419
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12554
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4066
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 45
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 227
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8988
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5210
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1369
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2409
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 8.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4666
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 544
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20567
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Ser729Ser
num of homozygotes: 0
population: African
population: Other
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
reference allele: T
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: DP
site quality: FS
site quality: MQ
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff

8-18513185-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18513185
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 18513185
    reference: chr 8
allele count: 1
allele frequency: 8.304268393954492e-6
allele num: 120420
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000430640
  ensembl transcript: ENST00000523619
  gene symbol: PSD3
  hgvsc: ENST00000523619.1:c.1988A>G
  hgvsp: ENSP00000430640.1:p.Asn663Ser
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000324127
  ensembl transcript: ENST00000327040
  gene symbol: PSD3
  hgvsc: ENST00000327040.8:c.2183A>G
  hgvsp: ENSP00000324127.8:p.Asn728Ser
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000393228
  ensembl transcript: ENST00000428502
  gene symbol: PSD3
  hgvsc: ENST00000428502.2:c.170A>G
  hgvsp: ENSP00000393228.2:p.Asn57Ser
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl transcript: ENST00000521878
  gene symbol: PSD3
  hgvsc: ENST00000521878.1:n.225+28222A>G
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000428889
  ensembl transcript: ENST00000518315
  gene symbol: PSD3
  hgvsc: ENST00000518315.1:c.*189A>G
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000286485
  ensembl transcript: ENST00000286485
  gene symbol: PSD3
  hgvsc: ENST00000286485.8:c.581A>G
  hgvsp: ENSP00000286485.8:p.Asn194Ser
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000401704
  ensembl transcript: ENST00000440756
  gene symbol: PSD3
  hgvsc: ENST00000440756.2:c.2189A>G
  hgvsp: ENSP00000401704.2:p.Asn730Ser
  variant of: http://identifiers.org/hgnc/19093
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5195
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12978
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1160
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2409
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 61
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8988
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4066
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1568
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6427
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 42
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12552
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1369
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3706
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 46
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2428
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 547
  bin: 2.25e1
  variant carriers: 0
hgvs: p.Asn728Ser
num of homozygotes: 0
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
population: Latino
reference allele: T
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum

8-18513193-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18513193
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 18513193
    reference: chr 8
allele count: 1
allele frequency: 8.30827005200977e-6
allele num: 120362
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl transcript: ENST00000521878
  gene symbol: PSD3
  hgvsc: ENST00000521878.1:n.225+28214T>C
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000401704
  ensembl transcript: ENST00000440756
  gene symbol: PSD3
  hgvsc: ENST00000440756.2:c.2181T>C
  hgvsp: ENST00000440756.2:c.2181T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000428889
  ensembl transcript: ENST00000518315
  gene symbol: PSD3
  hgvsc: ENST00000518315.1:c.*181T>C
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000393228
  ensembl transcript: ENST00000428502
  gene symbol: PSD3
  hgvsc: ENST00000428502.2:c.162T>C
  hgvsp: ENST00000428502.2:c.162T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000286485
  ensembl transcript: ENST00000286485
  gene symbol: PSD3
  hgvsc: ENST00000286485.8:c.573T>C
  hgvsp: ENST00000286485.8:c.573T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000324127
  ensembl transcript: ENST00000327040
  gene symbol: PSD3
  hgvsc: ENST00000327040.8:c.2175T>C
  hgvsp: ENST00000327040.8:c.2175T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000430640
  ensembl transcript: ENST00000523619
  gene symbol: PSD3
  hgvsc: ENST00000523619.1:c.1980T>C
  hgvsp: ENST00000523619.1:c.1980T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/19093
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 85
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6426
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 435
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12552
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4065
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8987
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5143
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1567
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1160
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1369
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12967
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2411
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 327
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2426
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6809
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 551
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.75e1
  variant carriers: 0
hgvs: c.2175T>C
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: A
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: QD

8-18513195-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18513195
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 18513195
    reference: chr 8
allele count: 1
allele frequency: 8.308684236764266e-6
allele num: 120356
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: splice_region_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000428889
  ensembl transcript: ENST00000518315
  gene symbol: PSD3
  hgvsc: ENST00000518315.1:c.*179G>C
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000430640
  ensembl transcript: ENST00000523619
  gene symbol: PSD3
  hgvsc: ENST00000523619.1:c.1978G>C
  hgvsp: ENSP00000430640.1:p.Ala660Pro
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000286485
  ensembl transcript: ENST00000286485
  gene symbol: PSD3
  hgvsc: ENST00000286485.8:c.571G>C
  hgvsp: ENSP00000286485.8:p.Ala191Pro
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000393228
  ensembl transcript: ENST00000428502
  gene symbol: PSD3
  hgvsc: ENST00000428502.2:c.160G>C
  hgvsp: ENSP00000393228.2:p.Ala54Pro
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000401704
  ensembl transcript: ENST00000440756
  gene symbol: PSD3
  hgvsc: ENST00000440756.2:c.2179G>C
  hgvsp: ENSP00000401704.2:p.Ala727Pro
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: true
  consequence: missense_variant
  consequence: splice_region_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000324127
  ensembl transcript: ENST00000327040
  gene symbol: PSD3
  hgvsc: ENST00000327040.8:c.2173G>C
  hgvsp: ENSP00000324127.8:p.Ala725Pro
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl transcript: ENST00000521878
  gene symbol: PSD3
  hgvsc: ENST00000521878.1:n.225+28212G>C
  variant of: http://identifiers.org/hgnc/19093
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 261
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2411
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8984
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6427
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4066
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 91
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12556
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 56
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1370
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1567
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12970
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5123
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1160
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2426
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5191
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4665
  bin: 8.25e1
  variant carriers: 0
hgvs: p.Ala725Pro
num of homozygotes: 0
population: Other
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: European (Finnish)
population: South Asian
reference allele: C
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: BaseQRankSum

8-18513203-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18513203
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 18513203
    reference: chr 8
allele count: 2
allele frequency: 1.663422991832593e-5
allele num: 120234
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000428889
  ensembl transcript: ENST00000518315
  gene symbol: PSD3
  hgvsc: ENST00000518315.1:c.*179-8C>G
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000430640
  ensembl transcript: ENST00000523619
  gene symbol: PSD3
  hgvsc: ENST00000523619.1:c.1978-8C>G
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000401704
  ensembl transcript: ENST00000440756
  gene symbol: PSD3
  hgvsc: ENST00000440756.2:c.2179-8C>G
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000324127
  ensembl transcript: ENST00000327040
  gene symbol: PSD3
  hgvsc: ENST00000327040.8:c.2173-8C>G
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000393228
  ensembl transcript: ENST00000428502
  gene symbol: PSD3
  hgvsc: ENST00000428502.2:c.160-8C>G
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000286485
  ensembl transcript: ENST00000286485
  gene symbol: PSD3
  hgvsc: ENST00000286485.8:c.571-8C>G
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl transcript: ENST00000521878
  gene symbol: PSD3
  hgvsc: ENST00000521878.1:n.225+28204C>G
  variant of: http://identifiers.org/hgnc/19093
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1567
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12566
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 142
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8992
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 174
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4923
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 493
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2410
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12909
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4067
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1160
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1369
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6424
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4664
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 148
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 502
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12742
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 1.25e1
  variant carriers: 0
hgvs: c.2173-8C>G
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: East Asian
population: South Asian
population: Latino
population: Other
reference allele: G
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD
site quality: ClippingRankSum

8-18513208-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18513208
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 18513208
    reference: chr 8
allele count: 2
allele frequency: 1.663755095249979e-5
allele num: 120210
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000430640
  ensembl transcript: ENST00000523619
  gene symbol: PSD3
  hgvsc: ENST00000523619.1:c.1978-13T>C
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000401704
  ensembl transcript: ENST00000440756
  gene symbol: PSD3
  hgvsc: ENST00000440756.2:c.2179-13T>C
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000393228
  ensembl transcript: ENST00000428502
  gene symbol: PSD3
  hgvsc: ENST00000428502.2:c.160-13T>C
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000428889
  ensembl transcript: ENST00000518315
  gene symbol: PSD3
  hgvsc: ENST00000518315.1:c.*179-13T>C
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000324127
  ensembl transcript: ENST00000327040
  gene symbol: PSD3
  hgvsc: ENST00000327040.8:c.2173-13T>C
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl transcript: ENST00000521878
  gene symbol: PSD3
  hgvsc: ENST00000521878.1:n.225+28199T>C
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000286485
  ensembl transcript: ENST00000286485
  gene symbol: PSD3
  hgvsc: ENST00000286485.8:c.571-13T>C
  variant of: http://identifiers.org/hgnc/19093
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12920
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8986
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1569
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4917
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4067
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12536
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1160
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6429
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2412
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 146
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 336
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1369
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 36
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5176
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 95
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 517
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4662
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
reference allele: A
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: MQ
site quality: ClippingRankSum
site quality: DP

8-18513212-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18513212
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 18513212
    reference: chr 8
allele count: 2
allele frequency: 1.664502813009754e-5
allele num: 120156
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000401704
  ensembl transcript: ENST00000440756
  gene symbol: PSD3
  hgvsc: ENST00000440756.2:c.2179-17A>G
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000324127
  ensembl transcript: ENST00000327040
  gene symbol: PSD3
  hgvsc: ENST00000327040.8:c.2173-17A>G
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl transcript: ENST00000521878
  gene symbol: PSD3
  hgvsc: ENST00000521878.1:n.225+28195A>G
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000428889
  ensembl transcript: ENST00000518315
  gene symbol: PSD3
  hgvsc: ENST00000518315.1:c.*179-17A>G
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000286485
  ensembl transcript: ENST00000286485
  gene symbol: PSD3
  hgvsc: ENST00000286485.8:c.571-17A>G
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000393228
  ensembl transcript: ENST00000428502
  gene symbol: PSD3
  hgvsc: ENST00000428502.2:c.160-17A>G
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000430640
  ensembl transcript: ENST00000523619
  gene symbol: PSD3
  hgvsc: ENST00000523619.1:c.1978-17A>G
  variant of: http://identifiers.org/hgnc/19093
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4851
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2412
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 825
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1567
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 451
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 258
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 641
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12514
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4066
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 164
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12845
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 403
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1162
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8982
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1369
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6426
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6697
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5171
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 162
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 65
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3704
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 125
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 508
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: FS
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum

8-18513215-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18513215
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 18513215
    reference: chr 8
allele count: 2
allele frequency: 1.664835347784104e-5
allele num: 120132
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000286485
  ensembl transcript: ENST00000286485
  gene symbol: PSD3
  hgvsc: ENST00000286485.8:c.571-20C>G
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000324127
  ensembl transcript: ENST00000327040
  gene symbol: PSD3
  hgvsc: ENST00000327040.8:c.2173-20C>G
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000430640
  ensembl transcript: ENST00000523619
  gene symbol: PSD3
  hgvsc: ENST00000523619.1:c.1978-20C>G
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000393228
  ensembl transcript: ENST00000428502
  gene symbol: PSD3
  hgvsc: ENST00000428502.2:c.160-20C>G
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000401704
  ensembl transcript: ENST00000440756
  gene symbol: PSD3
  hgvsc: ENST00000440756.2:c.2179-20C>G
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000428889
  ensembl transcript: ENST00000518315
  gene symbol: PSD3
  hgvsc: ENST00000518315.1:c.*179-20C>G
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl transcript: ENST00000521878
  gene symbol: PSD3
  hgvsc: ENST00000521878.1:n.225+28192C>G
  variant of: http://identifiers.org/hgnc/19093
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1566
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 300
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 826
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1160
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4066
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8982
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4820
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2414
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 445
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12494
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 432
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6424
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 492
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1369
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12804
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5164
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 128
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12401
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 77
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 152
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 175
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 71
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 154
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
population: European (Finnish)
population: Latino
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: MQ

http://identifiers.org/exac.variant/8-18513220-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18513220
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 18513220
    reference: chr 8
allele count: 13098
allele frequency: 1.091372673188128e-1
allele num: 120014
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000430640
  ensembl transcript: ENST00000523619
  gene symbol: PSD3
  hgvsc: ENST00000523619.1:c.1978-25G>T
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000286485
  ensembl transcript: ENST00000286485
  gene symbol: PSD3
  hgvsc: ENST00000286485.8:c.571-25G>T
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000324127
  ensembl transcript: ENST00000327040
  gene symbol: PSD3
  hgvsc: ENST00000327040.8:c.2173-25G>T
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl transcript: ENST00000521878
  gene symbol: PSD3
  hgvsc: ENST00000521878.1:n.225+28187G>T
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000401704
  ensembl transcript: ENST00000440756
  gene symbol: PSD3
  hgvsc: ENST00000440756.2:c.2179-25G>T
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000393228
  ensembl transcript: ENST00000428502
  gene symbol: PSD3
  hgvsc: ENST00000428502.2:c.160-25G>T
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000428889
  ensembl transcript: ENST00000518315
  gene symbol: PSD3
  hgvsc: ENST00000518315.1:c.*179-25G>T
  variant of: http://identifiers.org/hgnc/19093
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 1.25e1
  variant carriers: 64
genotype depth: GenotypeDepth
  all individuals: 2058
  bin: 5.75e1
  variant carriers: 1065
genotype depth: GenotypeDepth
  all individuals: 11490
  bin: 3.25e1
  variant carriers: 989
genotype depth: GenotypeDepth
  all individuals: 11809
  bin: 2.75e1
  variant carriers: 560
genotype depth: GenotypeDepth
  all individuals: 4377
  bin: 4.75e1
  variant carriers: 1508
genotype depth: GenotypeDepth
  all individuals: 1101
  bin: 6.75e1
  variant carriers: 551
genotype depth: GenotypeDepth
  all individuals: 2950
  bin: 5.25e1
  variant carriers: 1346
genotype depth: GenotypeDepth
  all individuals: 8460
  bin: 3.75e1
  variant carriers: 1314
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 2.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 1.75e1
  variant carriers: 66
genotype depth: GenotypeDepth
  all individuals: 1647
  bin: 6.25e1
  variant carriers: 882
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 8.75e1
  variant carriers: 168
genotype depth: GenotypeDepth
  all individuals: 6320
  bin: 4.25e1
  variant carriers: 1499
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 7.5e0
  variant carriers: 76
genotype depth: GenotypeDepth
  all individuals: 4142
  bin: 2.25e1
  variant carriers: 253
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 7.25e1
  variant carriers: 436
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 7.75e1
  variant carriers: 304
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 9.25e1
  variant carriers: 114
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 8.25e1
  variant carriers: 220
genotype depth: GenotypeDepth
  all individuals: 1819
  bin: 9.75e1
  variant carriers: 862
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 4.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 2.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 25688
  bin: 9.75e1
  variant carriers: 11989
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 1.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 4378
  bin: 7.75e1
  variant carriers: 22
genotype quality: GenotypeQuality
  all individuals: 3808
  bin: 8.25e1
  variant carriers: 31
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 5.75e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 2.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 1.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 7.5e0
  variant carriers: 5
num of homozygotes: 908
population: Other
population: Latino
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
reference allele: C
site quality: FS
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: VQSLOD

8-18513220-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18513220
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 18513220
    reference: chr 8
allele count: 9
allele frequency: 7.499125102071425e-5
allele num: 120014
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000324127
  ensembl transcript: ENST00000327040
  gene symbol: PSD3
  hgvsc: ENST00000327040.8:c.2173-25G>A
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000286485
  ensembl transcript: ENST00000286485
  gene symbol: PSD3
  hgvsc: ENST00000286485.8:c.571-25G>A
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000393228
  ensembl transcript: ENST00000428502
  gene symbol: PSD3
  hgvsc: ENST00000428502.2:c.160-25G>A
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl transcript: ENST00000521878
  gene symbol: PSD3
  hgvsc: ENST00000521878.1:n.225+28187G>A
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000428889
  ensembl transcript: ENST00000518315
  gene symbol: PSD3
  hgvsc: ENST00000518315.1:c.*179-25G>A
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000430640
  ensembl transcript: ENST00000523619
  gene symbol: PSD3
  hgvsc: ENST00000523619.1:c.1978-25G>A
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000401704
  ensembl transcript: ENST00000440756
  gene symbol: PSD3
  hgvsc: ENST00000440756.2:c.2179-25G>A
  variant of: http://identifiers.org/hgnc/19093
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 8460
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2950
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1101
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 188
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1647
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6320
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2058
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4142
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11490
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11809
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 566
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4377
  bin: 4.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 423
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 473
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 346
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1819
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1972
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 39
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 245
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 94
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 165
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 452
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
reference allele: C
site quality: VQSLOD
site quality: MQ
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: ClippingRankSum

8-18513233-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18513233
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 18513233
    reference: chr 8
allele count: 1
allele frequency: 8.34306691139663e-6
allele num: 119860
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000401704
  ensembl transcript: ENST00000440756
  gene symbol: PSD3
  hgvsc: ENST00000440756.2:c.2179-38T>C
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000324127
  ensembl transcript: ENST00000327040
  gene symbol: PSD3
  hgvsc: ENST00000327040.8:c.2173-38T>C
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000428889
  ensembl transcript: ENST00000518315
  gene symbol: PSD3
  hgvsc: ENST00000518315.1:c.*179-38T>C
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl transcript: ENST00000521878
  gene symbol: PSD3
  hgvsc: ENST00000521878.1:n.225+28174T>C
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000393228
  ensembl transcript: ENST00000428502
  gene symbol: PSD3
  hgvsc: ENST00000428502.2:c.160-38T>C
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000286485
  ensembl transcript: ENST00000286485
  gene symbol: PSD3
  hgvsc: ENST00000286485.8:c.571-38T>C
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000430640
  ensembl transcript: ENST00000523619
  gene symbol: PSD3
  hgvsc: ENST00000523619.1:c.1978-38T>C
  variant of: http://identifiers.org/hgnc/19093
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4667
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 921
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8656
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12384
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 910
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5822
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1212
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 448
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3471
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1990
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13324
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2574
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3278
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 193
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1013
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 676
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6525
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 389
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 129
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 775
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Latino
population: East Asian
population: South Asian
reference allele: A
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQ
site quality: QD

http://identifiers.org/exac.variant/8-18513244-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18513244
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 18513244
    reference: chr 8
allele count: 74
allele frequency: 6.184808772399037e-4
allele num: 119648
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000393228
  ensembl transcript: ENST00000428502
  gene symbol: PSD3
  hgvsc: ENST00000428502.2:c.160-49G>T
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000430640
  ensembl transcript: ENST00000523619
  gene symbol: PSD3
  hgvsc: ENST00000523619.1:c.1978-49G>T
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000286485
  ensembl transcript: ENST00000286485
  gene symbol: PSD3
  hgvsc: ENST00000286485.8:c.571-49G>T
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000401704
  ensembl transcript: ENST00000440756
  gene symbol: PSD3
  hgvsc: ENST00000440756.2:c.2179-49G>T
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000324127
  ensembl transcript: ENST00000327040
  gene symbol: PSD3
  hgvsc: ENST00000327040.8:c.2173-49G>T
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl transcript: ENST00000521878
  gene symbol: PSD3
  hgvsc: ENST00000521878.1:n.225+28163G>T
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000428889
  ensembl transcript: ENST00000518315
  gene symbol: PSD3
  hgvsc: ENST00000518315.1:c.*179-49G>T
  variant of: http://identifiers.org/hgnc/19093
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3465
  bin: 4.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1210
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 524
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 268
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8560
  bin: 3.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 3044
  bin: 1.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 689
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 910
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 919
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1991
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 7327
  bin: 2.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 11371
  bin: 3.25e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5812
  bin: 4.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11282
  bin: 2.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1106
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 151
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9071
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 541
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 258
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3537
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2299
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 629
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3169
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1506
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: Latino
population: East Asian
population: Other
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum

8-18513246-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 18513246
    reference: chr 8
  end: Position
    type: ExactPosition
    position: 18513246
    reference: chr 8
allele count: 1
allele frequency: 8.357151214294072e-6
allele num: 119658
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000324127
  ensembl transcript: ENST00000327040
  gene symbol: PSD3
  hgvsc: ENST00000327040.8:c.2173-51A>T
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000401704
  ensembl transcript: ENST00000440756
  gene symbol: PSD3
  hgvsc: ENST00000440756.2:c.2179-51A>T
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000430640
  ensembl transcript: ENST00000523619
  gene symbol: PSD3
  hgvsc: ENST00000523619.1:c.1978-51A>T
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000393228
  ensembl transcript: ENST00000428502
  gene symbol: PSD3
  hgvsc: ENST00000428502.2:c.160-51A>T
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000428889
  ensembl transcript: ENST00000518315
  gene symbol: PSD3
  hgvsc: ENST00000518315.1:c.*179-51A>T
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl transcript: ENST00000521878
  gene symbol: PSD3
  hgvsc: ENST00000521878.1:n.225+28161A>T
  variant of: http://identifiers.org/hgnc/19093
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000156011
  ensembl protein: ENSP00000286485
  ensembl transcript: ENST00000286485
  gene symbol: PSD3
  hgvsc: ENST00000286485.8:c.571-51A>T
  variant of: http://identifiers.org/hgnc/19093
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 275
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 688
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11210
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1210
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11212
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 527
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 914
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3036
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 556
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8548
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5813
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3465
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1236
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 384
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
reference allele: T

GenotypeQuality
all individuals: 43
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 312
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7096
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1540
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3091
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 382
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5
bin: 1.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11404
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8648
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.06134076857801e-5
allele num: 16498
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66602
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.953e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.26e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.0e-1

QD
type: SiteQuality
SIO_000300: 1.342e1

MQRankSum
type: SiteQuality
SIO_000300: 4.68e-1

FS
type: SiteQuality
SIO_000300: 6.55e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.2e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.07e0

DP
type: SiteQuality
SIO_000300: 1.719963e6

VQSLOD
type: SiteQuality
SIO_000300: 5.32e-1

GenotypeQuality
all individuals: 4
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 7094
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 17
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 45448
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4
bin: 5.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66588
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6584
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11398
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
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allele count: 3
allele frequency: 3.469812630117973e-4
allele num: 8646
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.719751e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.1e-3

QD
type: SiteQuality
SIO_000300: 1.422e1

FS
type: SiteQuality
SIO_000300: 5.902e0

MQRankSum
type: SiteQuality
SIO_000300: 4.01e-1

VQSLOD
type: SiteQuality
SIO_000300: 6.11e-1

MQ
type: SiteQuality
SIO_000300: 5.975e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.52e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.77e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.42e-1

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
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GenotypeQuality
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bin: 1.75e1
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 883
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6582
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11398
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.50177209106746e-5
allele num: 66588
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.063545961678389e-5
allele num: 16492
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.27e0

MQ
type: SiteQuality
SIO_000300: 5.954e1

QD
type: SiteQuality
SIO_000300: 1.491e1

MQRankSum
type: SiteQuality
SIO_000300: 1.64e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.47e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.67e-1

FS
type: SiteQuality
SIO_000300: 5.42e-1

VQSLOD
type: SiteQuality
SIO_000300: 7.34e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

DP
type: SiteQuality
SIO_000300: 1.719451e6

GenotypeQuality
all individuals: 382
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16492
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11394
num of homozygotes: 0

East Asian
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allele count: 1
allele frequency: 1.156604210039325e-4
allele num: 8646
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.501862309263487e-5
allele num: 66584
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6576
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.47e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.76e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.16e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 1.02e0

FS
type: SiteQuality
SIO_000300: 3.085e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

DP
type: SiteQuality
SIO_000300: 1.719282e6

MQRankSum
type: SiteQuality
SIO_000300: 2.82e-1

QD
type: SiteQuality
SIO_000300: 1.374e1

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.782715615668365e-5
allele num: 11386
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66578
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6572
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.01e0

FS
type: SiteQuality
SIO_000300: 8.74e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.2e-2

MQ
type: SiteQuality
SIO_000300: 5.961e1

DP
type: SiteQuality
SIO_000300: 1.719051e6

QD
type: SiteQuality
SIO_000300: 1.525e1

MQRankSum
type: SiteQuality
SIO_000300: -8.3e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 1.1e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.88e-1

GenotypeQuality
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bin: 7.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
all individuals: 10
bin: 3.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66578
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.064281382656155e-5
allele num: 16490
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11388
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6572
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.97e0

QD
type: SiteQuality
SIO_000300: 1.627e1

MQRankSum
type: SiteQuality
SIO_000300: -6.879999999999999e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.513e0

DP
type: SiteQuality
SIO_000300: 1.719016e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.54e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 2.334e0

VQSLOD
type: SiteQuality
SIO_000300: 9.2e-2

GenotypeQuality
all individuals: 45391
bin: 6.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 7095
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variant carriers: 0

GenotypeQuality
all individuals: 381
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 908
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11388
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.313208420078649e-4
allele num: 8646
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66558
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

FS
type: SiteQuality
SIO_000300: 5.38e-1

VQSLOD
type: SiteQuality
SIO_000300: 3.47e0

MQ
type: SiteQuality
SIO_000300: 5.978e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.238e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.03e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.84e-1

QD
type: SiteQuality
SIO_000300: 1.234e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.52e-1

DP
type: SiteQuality
SIO_000300: 1.718947e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6572
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66562
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.785802143735723e-5
allele num: 11382
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16484
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 1.58e0

QD
type: SiteQuality
SIO_000300: 1.657e1

DP
type: SiteQuality
SIO_000300: 1.718605e6

MQRankSum
type: SiteQuality
SIO_000300: -1.056e0

FS
type: SiteQuality
SIO_000300: 8.65e-1

MQ
type: SiteQuality
SIO_000300: 5.941e1

ClippingRankSum
type: SiteQuality
SIO_000300: 5.93e-1

VQSLOD
type: SiteQuality
SIO_000300: -7.373e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -9.74e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11382
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16484
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.502494140272853e-5
allele num: 66556
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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Other
type: Population
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FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
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BaseQRankSum
type: SiteQuality
SIO_000300: 2.24e0

MQRankSum
type: SiteQuality
SIO_000300: -4.4e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.718491e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 1.36e0

QD
type: SiteQuality
SIO_000300: 5.39e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.009e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 9
allele frequency: 1.35236664162284e-4
allele num: 66550
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11380
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6570
num of homozygotes: 0

South Asian
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allele count: 2
allele frequency: 1.213297743266198e-4
allele num: 16484
num of homozygotes: 0

East Asian
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allele count: 0
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allele num: 8646
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.719115e6

VQSLOD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 2.032e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.73e0

QD
type: SiteQuality
SIO_000300: 1.215e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.19e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.06e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 3.41e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 7.75e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8646
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11378
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.005891547432969e-5
allele num: 66536
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6568
num of homozygotes: 0

South Asian
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allele num: 16484
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.27e-1

QD
type: SiteQuality
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VQSLOD
type: SiteQuality
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DP
type: SiteQuality
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MQRankSum
type: SiteQuality
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FS
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ReadPosRankSum
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.95e1

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 1.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 379
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16482
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6566
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11364
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66526
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.156871818602499e-4
allele num: 8644
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 9.05e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.021e0

DP
type: SiteQuality
SIO_000300: 1.717943e6

MQRankSum
type: SiteQuality
SIO_000300: -1.543e0

VQSLOD
type: SiteQuality
SIO_000300: -6.998e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.227e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.215e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.94e0

GenotypeQuality
all individuals: 311
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 4.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.620935154897056e-5
allele num: 10394
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6566
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66526
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16474
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11356
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.973e1

DP
type: SiteQuality
SIO_000300: 1.717598e6

BaseQRankSum
type: SiteQuality
SIO_000300: -5.4e-2

QD
type: SiteQuality
SIO_000300: 1.057e1

VQSLOD
type: SiteQuality
SIO_000300: 4.57e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.78e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.14e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.27e-1

GenotypeQuality
all individuals: 91
bin: 7.5e0
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 14
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variant carriers: 0

GenotypeQuality
all individuals: 13
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6562
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10394
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11354
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.503442884204829e-5
allele num: 66514
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16478
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 4.3e-2

FS
type: SiteQuality
SIO_000300: 3.564e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.0e-4

DP
type: SiteQuality
SIO_000300: 1.717256e6

MQ
type: SiteQuality
SIO_000300: 5.967e1

VQSLOD
type: SiteQuality
SIO_000300: 5.89e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.77e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.035e0

QD
type: SiteQuality
SIO_000300: 1.206e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.02e0

GenotypeQuality
all individuals: 869
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 20
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variant carriers: 0

GenotypeQuality
all individuals: 35
bin: 2.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6552
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.081245439065921e-5
allele num: 16444
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.522022248349462e-5
allele num: 66342
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10374
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11340
num of homozygotes: 0

East Asian
type: Population
allele count: 4
allele frequency: 4.637143519591931e-4
allele num: 8626
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.193e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -2.5e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.32e0

FS
type: SiteQuality
SIO_000300: 2.96e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.909999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.077e0

DP
type: SiteQuality
SIO_000300: 1.71502e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.17e-1

GenotypeQuality
all individuals: 14
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 102
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 9
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 14
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variant carriers: 0

GenotypeQuality
all individuals: 1624
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6550
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.016136329362087e-5
allele num: 66310
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16438
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11338
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10370
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.32e0

VQSLOD
type: SiteQuality
SIO_000300: -5.609e-1

DP
type: SiteQuality
SIO_000300: 1.713276e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 1.33e0

FS
type: SiteQuality
SIO_000300: 2.514e0

QD
type: SiteQuality
SIO_000300: 1.318e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -2.81e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.75e0

GenotypeQuality
all individuals: 20
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7045
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variant carriers: 0

GenotypeQuality
all individuals: 34
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variant carriers: 0

GenotypeQuality
all individuals: 34
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variant carriers: 0

GenotypeQuality
all individuals: 864
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 17
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variant carriers: 0

GenotypeQuality
all individuals: 378
bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16436
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11334
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.645061728395061e-5
allele num: 10368
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66288
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6552
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.71306e6

ClippingRankSum
type: SiteQuality
SIO_000300: -7.12e-1

FS
type: SiteQuality
SIO_000300: 2.772e0

MQRankSum
type: SiteQuality
SIO_000300: 8.03e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: -5.227e0

MQ
type: SiteQuality
SIO_000300: 5.778e1

QD
type: SiteQuality
SIO_000300: 1.11e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.79e-1

VQSLOD
type: SiteQuality
SIO_000300: -7.692e-1

GenotypeQuality
all individuals: 19
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 793
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 6980
bin: 6.75e1
variant carriers: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.094588005850804e-5
allele num: 16408
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 906
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8600
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11316
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66102
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10348
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6542
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 9.88e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.83e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.27e0

QD
type: SiteQuality
SIO_000300: 1.448e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: 8.2e-2

MQ
type: SiteQuality
SIO_000300: 5.972e1

FS
type: SiteQuality
SIO_000300: 2.122e0

DP
type: SiteQuality
SIO_000300: 1.708246e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.1e-2

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 3

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 188
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GenotypeQuality
all individuals: 845
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16294
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6524
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8490
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10298
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.594321418726454e-5
allele num: 65298
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11226
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.782e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -1.295e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 1.689715e6

VQSLOD
type: SiteQuality
SIO_000300: 3.6e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -1.321e0

QD
type: SiteQuality
SIO_000300: 1.136e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.41e-1

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 316
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 380
bin: 5.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64496
num of homozygotes: 0

South Asian
type: Population
allele count: 5
allele frequency: 3.086038760646834e-4
allele num: 16202
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11138
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8380
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10220
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6480
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.93e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.16e-1

QD
type: SiteQuality
SIO_000300: 1.339e1

VQSLOD
type: SiteQuality
SIO_000300: 1.65e0

FS
type: SiteQuality
SIO_000300: 2.475e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

MQRankSum
type: SiteQuality
SIO_000300: -7.36e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.97e-1

DP
type: SiteQuality
SIO_000300: 1.668213e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

GenotypeQuality
all individuals: 127
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 19
bin: 1.25e1
variant carriers: 0

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6575
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 320
bin: 3.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 364
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 300
bin: 8.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16202
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8380
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6480
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11138
num of homozygotes: 0

African
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allele count: 1
allele frequency: 9.784735812133073e-5
allele num: 10220
num of homozygotes: 0

Other
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allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64496
num of homozygotes: 0

VQSLOD
type: SiteQuality
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FS
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SIO_000300: 2.475e0

MQ
type: SiteQuality
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MQRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: 1.7e-3

ReadPosRankSum
type: SiteQuality
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DP
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SIO_000300: 1.668213e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.93e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.16e-1

QD
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SIO_000300: 1.339e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 2.25e1
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 3.25e1
variant carriers: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10204
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6472
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 8.983111749910169e-5
allele num: 11132
num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64322
num of homozygotes: 0

FS
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InbreedingCoeff
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BaseQRankSum
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VQSLOD
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ReadPosRankSum
type: SiteQuality
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QD
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MQRankSum
type: SiteQuality
SIO_000300: 3.1e-2

ClippingRankSum
type: SiteQuality
SIO_000300: 4.03e-1

MQ
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.663433e6

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64112
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8332
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16140
num of homozygotes: 0

Latino
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allele count: 1
allele frequency: 9.009009009009009e-5
allele num: 11100
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6464
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African
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.11e-1

QD
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DP
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BaseQRankSum
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ReadPosRankSum
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 6.106e0

MQ
type: SiteQuality
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MQRankSum
type: SiteQuality
SIO_000300: -1.292e0

VQSLOD
type: SiteQuality
SIO_000300: -3.458e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 9.75e1
variant carriers: 4

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10178
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11076
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 888
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16112
num of homozygotes: 0

European (Non-Finnish)
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allele count: 4
allele frequency: 6.255277890720296e-5
allele num: 63946
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6462
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.6e-1

QD
type: SiteQuality
SIO_000300: 1.156e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

FS
type: SiteQuality
SIO_000300: 5.628e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.56e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.01e-1

VQSLOD
type: SiteQuality
SIO_000300: 5.649999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.0e-1

MQ
type: SiteQuality
SIO_000300: 5.959e1

DP
type: SiteQuality
SIO_000300: 1.653249e6

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 4.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11046
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16070
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8274
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10160
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6460
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 886
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.569661580963144e-5
allele num: 63708
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.766e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.9e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.41e-1

MQRankSum
type: SiteQuality
SIO_000300: 5.73e-1

FS
type: SiteQuality
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DP
type: SiteQuality
SIO_000300: 1.646661e6

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 5.15e-1

QD
type: SiteQuality
SIO_000300: 1.305e1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 880
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.582328554701098e-5
allele num: 63198
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10124
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8202
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 10980
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6430
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15986
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.418e0

DP
type: SiteQuality
SIO_000300: 1.631873e6

BaseQRankSum
type: SiteQuality
SIO_000300: 1.29e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.9e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.118e0

MQRankSum
type: SiteQuality
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QD
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 5.936e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.03e0

VQSLOD
type: SiteQuality
SIO_000300: 3.45e-1

GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 15710
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8036
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.616658044490429e-5
allele num: 61856
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 10030
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6392
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10790
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 872
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

InbreedingCoeff
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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DP
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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FS
type: SiteQuality
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MQRankSum
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QD
type: SiteQuality
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VQSLOD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 61856
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8036
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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Latino
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allele frequency: 2.780352177942539e-4
allele num: 10790
num of homozygotes: 0

Other
type: Population
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allele num: 872
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BaseQRankSum
type: SiteQuality
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FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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VQSLOD
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InbreedingCoeff
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MQRankSum
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ReadPosRankSum
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MQ
type: SiteQuality
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DP
type: SiteQuality
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QD
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6320
num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 60444
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Latino
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allele frequency: 0.0e0
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African
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South Asian
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Other
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East Asian
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allele num: 7892
num of homozygotes: 0

FS
type: SiteQuality
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MQRankSum
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BaseQRankSum
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ClippingRankSum
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QD
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ReadPosRankSum
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VQSLOD
type: SiteQuality
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MQ
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DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10582
num of homozygotes: 0

Other
type: Population
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allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9946
num of homozygotes: 0

European (Non-Finnish)
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allele count: 1
allele frequency: 1.654423929587718e-5
allele num: 60444
num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

InbreedingCoeff
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ClippingRankSum
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ReadPosRankSum
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DP
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QD
type: SiteQuality
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BaseQRankSum
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FS
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MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 4.32e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.56e-1

GenotypeQuality
all individuals: 1017
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11252
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4356
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1059
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 433
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 741
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 32171
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 219
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 276
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 310
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1366
bin: 3.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 846
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.191286589516678e-4
allele num: 58760
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6244
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9838
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7676
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10332
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15200
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 2.898e0

MQRankSum
type: SiteQuality
SIO_000300: -2.63e-1

DP
type: SiteQuality
SIO_000300: 1.469726e6

VQSLOD
type: SiteQuality
SIO_000300: 1.29e0

QD
type: SiteQuality
SIO_000300: 1.619e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: 3.35e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.16e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.37e-1

GenotypeQuality
all individuals: 111
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 274
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 70
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 217
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1552
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4117
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 583
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 4.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 806
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 746
bin: 5.75e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7640
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9804
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 832
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6218
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10230
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 15066
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.719808757266192e-5
allele num: 58146
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.071e0

DP
type: SiteQuality
SIO_000300: 1.4416e6

VQSLOD
type: SiteQuality
SIO_000300: -9.12e-1

MQ
type: SiteQuality
SIO_000300: 5.942e1

MQRankSum
type: SiteQuality
SIO_000300: -7.9e-2

QD
type: SiteQuality
SIO_000300: 7.27e0

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.3e0

ClippingRankSum
type: SiteQuality
SIO_000300: 7.54e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

GenotypeQuality
all individuals: 146
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 454
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2988
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 441
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 855
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2907
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 24334
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 457
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2464
bin: 3.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9556
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14240
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9626
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7290
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 800
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6064
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.822755276876527e-5
allele num: 54862
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -2.003e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.7e-3

FS
type: SiteQuality
SIO_000300: 3.054e0

VQSLOD
type: SiteQuality
SIO_000300: -1.496e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -5.046e0

MQ
type: SiteQuality
SIO_000300: 5.966e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.496e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.21e-1

QD
type: SiteQuality
SIO_000300: 1.49e1

DP
type: SiteQuality
SIO_000300: 1.291029e6

GenotypeQuality
all individuals: 96
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 536
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1166
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 440
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 224
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 22968
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 483
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 592
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 436
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 194
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variant carriers: 0

GenotypeQuality
all individuals: 19477
bin: 2.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9540
num of homozygotes: 0

African
type: Population
allele count: 7
allele frequency: 7.359125315391085e-4
allele num: 9512
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14108
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6030
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7222
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 54328
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 802
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.95e-1

DP
type: SiteQuality
SIO_000300: 1.266817e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.4e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 1.341e1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.489e0

MQ
type: SiteQuality
SIO_000300: 5.988e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.81e-1

MQRankSum
type: SiteQuality
SIO_000300: -3.4e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.02e0

GenotypeQuality
all individuals: 19907
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 432
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 218
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 693
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 656
bin: 7.25e1
variant carriers: 1

GenotypeQuality
all individuals: 264
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 424
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 497
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variant carriers: 0

GenotypeQuality
all individuals: 476
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 546
bin: 5.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7192
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 24
allele frequency: 4.433606739082243e-4
allele num: 54132
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 792
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14066
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9500
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6012
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9482
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.52e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.29e-1

DP
type: SiteQuality
SIO_000300: 1.25625e6

VQSLOD
type: SiteQuality
SIO_000300: 5.75e0

QD
type: SiteQuality
SIO_000300: 1.569e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.56e0

MQRankSum
type: SiteQuality
SIO_000300: 1.12e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.6e-3

GenotypeQuality
all individuals: 1404
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 2911
bin: 9.75e1
variant carriers: 12

GenotypeQuality
all individuals: 411
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 377
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 269
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 258
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 621
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 570
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 438
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 442
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9362
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 772
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7020
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9260
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.686909581646424e-4
allele num: 5928
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13710
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 12
allele frequency: 2.274622791720373e-4
allele num: 52756
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 2.4e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -8.9e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.23e-1

QD
type: SiteQuality
SIO_000300: 1.512e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.9e-3

DP
type: SiteQuality
SIO_000300: 1.195781e6

FS
type: SiteQuality
SIO_000300: 1.454e0

MQRankSum
type: SiteQuality
SIO_000300: 3.68e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.51e-1

GenotypeQuality
all individuals: 540
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3833
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1625
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1692
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 382
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 399
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 418
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 253
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2898
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 16793
bin: 6.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 760
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6938
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.093135111499781e-4
allele num: 9148
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5852
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13454
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 51914
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9306
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.21e-1

QD
type: SiteQuality
SIO_000300: 1.431e1

DP
type: SiteQuality
SIO_000300: 1.159345e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.456e0

VQSLOD
type: SiteQuality
SIO_000300: 4.94e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.6e-3

FS
type: SiteQuality
SIO_000300: 7.671e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.5e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: -1.73e-1

GenotypeQuality
all individuals: 511
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 540
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2898
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 399
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1625
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 183
bin: 8.75e1
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GenotypeQuality
all individuals: 253
bin: 9.25e1
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GenotypeQuality
all individuals: 369
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 334
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 470
bin: 4.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9306
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13454
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.926262665177024e-5
allele num: 51914
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6938
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5852
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9148
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 760
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 7.671e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.456e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.21e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.6e-3

QD
type: SiteQuality
SIO_000300: 1.431e1

MQRankSum
type: SiteQuality
SIO_000300: -1.73e-1

DP
type: SiteQuality
SIO_000300: 1.159345e6

ClippingRankSum
type: SiteQuality
SIO_000300: -2.5e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 4.94e-1

GenotypeQuality
all individuals: 1468
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 576
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3409
bin: 7.5e0
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GenotypeQuality
all individuals: 454
bin: 7.75e1
variant carriers: 4

GenotypeQuality
all individuals: 243
bin: 9.25e1
variant carriers: 3

GenotypeQuality
all individuals: 135
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5229
bin: 2.75e1
variant carriers: 0

GenotypeQuality
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bin: 8.75e1
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GenotypeQuality
all individuals: 386
bin: 7.25e1
variant carriers: 2

GenotypeQuality
all individuals: 718
bin: 4.25e1
variant carriers: 2

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.439263097294185e-4
allele num: 48636
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6554
num of homozygotes: 0

Latino
type: Population
allele count: 12
allele frequency: 1.398275460265672e-3
allele num: 8582
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.840677434530344e-5
allele num: 12754
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.377410468319559e-3
allele num: 726
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5690
num of homozygotes: 0

African
type: Population
allele count: 357
allele frequency: 4.001344989912576e-2
allele num: 8922
num of homozygotes: 3

QD
type: SiteQuality
SIO_000300: 1.558e1

VQSLOD
type: SiteQuality
SIO_000300: 5.6e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 1.029984e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.0e-4

MQRankSum
type: SiteQuality
SIO_000300: 2.71e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.79e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.87e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.5e-2

GenotypeQuality
all individuals: 1130
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 354
bin: 2.5e0
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GenotypeQuality
all individuals: 22929
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 266
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GenotypeQuality
all individuals: 381
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GenotypeQuality
all individuals: 6746
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5019
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 346
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GenotypeQuality
all individuals: 240
bin: 9.25e1
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GenotypeQuality
all individuals: 378
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12146
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8100
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5558
num of homozygotes: 0

African
type: Population
allele count: 5
allele frequency: 5.80046403712297e-4
allele num: 8620
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 45976
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6256
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 696
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -8.3e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.05e-2

FS
type: SiteQuality
SIO_000300: 1.855e0

MQRankSum
type: SiteQuality
SIO_000300: 3.6e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.17e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.02e-1

MQ
type: SiteQuality
SIO_000300: 5.981e1

QD
type: SiteQuality
SIO_000300: 5.03e0

DP
type: SiteQuality
SIO_000300: 9.83716e5

BaseQRankSum
type: SiteQuality
SIO_000300: -3.606e0

GenotypeQuality
all individuals: 5439
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 378
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1758
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 171
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 953
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 381
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 427
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 346
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 240
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1130
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 3
allele frequency: 3.703703703703704e-4
allele num: 8100
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 696
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6256
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5558
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 9
allele frequency: 1.957543065947451e-4
allele num: 45976
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8620
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12146
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 5.981e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.17e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.02e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.6e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -3.606e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.05e-2

FS
type: SiteQuality
SIO_000300: 1.855e0

QD
type: SiteQuality
SIO_000300: 5.03e0

DP
type: SiteQuality
SIO_000300: 9.83716e5

VQSLOD
type: SiteQuality
SIO_000300: -8.3e-1

GenotypeQuality
all individuals: 282
bin: 5.75e1
variant carriers: 103

GenotypeQuality
all individuals: 4439
bin: 2.75e1
variant carriers: 65

GenotypeQuality
all individuals: 9493
bin: 9.75e1
variant carriers: 7206

GenotypeQuality
all individuals: 956
bin: 4.25e1
variant carriers: 65

GenotypeQuality
all individuals: 333
bin: 8.75e1
variant carriers: 203

GenotypeQuality
all individuals: 3250
bin: 3.75e1
variant carriers: 92

GenotypeQuality
all individuals: 352
bin: 9.25e1
variant carriers: 168

GenotypeQuality
all individuals: 2532
bin: 6.25e1
variant carriers: 85

GenotypeQuality
all individuals: 429
bin: 7.75e1
variant carriers: 123

GenotypeQuality
all individuals: 5616
bin: 3.25e1
variant carriers: 75

European (Finnish)
type: Population
allele count: 319
allele frequency: 5.951492537313433e-2
allele num: 5360
num of homozygotes: 13

Latino
type: Population
allele count: 838
allele frequency: 1.143558951965065e-1
allele num: 7328
num of homozygotes: 40

East Asian
type: Population
allele count: 1354
allele frequency: 2.315321477428181e-1
allele num: 5848
num of homozygotes: 155

African
type: Population
allele count: 1963
allele frequency: 2.388659041129229e-1
allele num: 8218
num of homozygotes: 237

South Asian
type: Population
allele count: 721
allele frequency: 6.491986313704304e-2
allele num: 11106
num of homozygotes: 25

European (Non-Finnish)
type: Population
allele count: 2976
allele frequency: 7.126095493510848e-2
allele num: 41762
num of homozygotes: 81

Other
type: Population
allele count: 50
allele frequency: 7.530120481927711e-2
allele num: 664
num of homozygotes: 4

MQ
type: SiteQuality
SIO_000300: 6.0e1

ClippingRankSum
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.4e-2

QD
type: SiteQuality
SIO_000300: 1.684e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.61e0

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: 3.9e-2

VQSLOD
type: SiteQuality
SIO_000300: 6.37e0

DP
type: SiteQuality
SIO_000300: 9.66382e5

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.78e-2

GenotypeQuality
all individuals: 3296
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 568
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6702
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2801
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3837
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2926
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 377
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 377
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 733
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 340
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5296
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 40338
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6986
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10768
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 3.699593044765076e-4
allele num: 5406
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7874
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 644
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-2

VQSLOD
type: SiteQuality
SIO_000300: 2.66e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.16e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.11e0

QD
type: SiteQuality
SIO_000300: 1.328e1

MQRankSum
type: SiteQuality
SIO_000300: -1.159e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.53e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 9.12864e5

GenotypeQuality
all individuals: 3875
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 724
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2932
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 6677
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5993
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 340
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 375
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 221
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 155
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2610
bin: 6.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5244
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 39698
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.886080724254998e-4
allele num: 10604
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6854
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7794
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5310
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 640
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.82e-1

DP
type: SiteQuality
SIO_000300: 9.06876e5

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.82e-1

MQRankSum
type: SiteQuality
SIO_000300: 3.23e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 3.51e0

QD
type: SiteQuality
SIO_000300: 1.981e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.34e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 2.37e0

GenotypeQuality
all individuals: 3875
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4013
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1191
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1359
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 375
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6677
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 221
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 340
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2610
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2932
bin: 9.75e1
variant carriers: 9

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 640
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10604
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.45900204260286e-4
allele num: 6854
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5244
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 39698
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5310
num of homozygotes: 0

African
type: Population
allele count: 8
allele frequency: 1.026430587631511e-3
allele num: 7794
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.34e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.82e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.82e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.37e0

DP
type: SiteQuality
SIO_000300: 9.06876e5

VQSLOD
type: SiteQuality
SIO_000300: 3.51e0

MQRankSum
type: SiteQuality
SIO_000300: 3.23e-1

QD
type: SiteQuality
SIO_000300: 1.981e1

GenotypeQuality
all individuals: 262
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4346
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 14825
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1288
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 154
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 151
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 605
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 221
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5013
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1736
bin: 4.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4918
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6098
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 598
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4758
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 35712
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.379310344827586e-4
allele num: 7250
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9338
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 7.35e-1

DP
type: SiteQuality
SIO_000300: 8.88082e5

MQRankSum
type: SiteQuality
SIO_000300: -3.123e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.57e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 1.53e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.51e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 4.64e0

MQ
type: SiteQuality
SIO_000300: 5.232e1

ClippingRankSum
type: SiteQuality
SIO_000300: -6.74e-1

GenotypeQuality
all individuals: 96
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2430
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 15
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3401
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6728
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5206
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3702
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20569
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 4657
bin: 8.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11528
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.754194303550527e-5
allele num: 10252
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66308
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16440
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.654e0

MQRankSum
type: SiteQuality
SIO_000300: 1.23e0

QD
type: SiteQuality
SIO_000300: 1.235e1

VQSLOD
type: SiteQuality
SIO_000300: 1.49e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.54e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.6e-2

MQ
type: SiteQuality
SIO_000300: 6.0e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.187e0

DP
type: SiteQuality
SIO_000300: 2.357217e6

GenotypeQuality
all individuals: 56
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4664
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2430
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20570
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3707
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 135
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 63
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5197
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6774
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3407
bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11524
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.508022680661117e-5
allele num: 66312
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16448
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10246
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.65e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.82e0

QD
type: SiteQuality
SIO_000300: 1.171e1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 2.360158e6

FS
type: SiteQuality
SIO_000300: 4.13e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.11e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.132e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.555e0

GenotypeQuality
all individuals: 9
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12892
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6774
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 92
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3407
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2430
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3707
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 69
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4664
bin: 8.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10246
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16448
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 4.524068041983351e-5
allele num: 66312
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11524
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8618
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.171e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.999999999999999e-4

VQSLOD
type: SiteQuality
SIO_000300: 1.82e0

MQRankSum
type: SiteQuality
SIO_000300: 2.65e-1

FS
type: SiteQuality
SIO_000300: 4.13e0

DP
type: SiteQuality
SIO_000300: 2.360158e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.11e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.555e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.132e0

GenotypeQuality
all individuals: 59
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6808
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13188
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 31
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2431
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5190
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

Other
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 4.52447742285766e-5
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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BaseQRankSum
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MQ
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InbreedingCoeff
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DP
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ClippingRankSum
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MQRankSum
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ReadPosRankSum
type: SiteQuality
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FS
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VQSLOD
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QD
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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South Asian
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allele frequency: 6.0790273556231e-5
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

FS
type: SiteQuality
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MQ
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BaseQRankSum
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ReadPosRankSum
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MQRankSum
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ClippingRankSum
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VQSLOD
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DP
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InbreedingCoeff
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QD
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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South Asian
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allele num: 16450
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East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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MQRankSum
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DP
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MQ
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FS
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ReadPosRankSum
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VQSLOD
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ClippingRankSum
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BaseQRankSum
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InbreedingCoeff
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele num: 66290
num of homozygotes: 0

East Asian
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Other
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num of homozygotes: 0

African
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QD
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MQRankSum
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BaseQRankSum
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InbreedingCoeff
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ReadPosRankSum
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ClippingRankSum
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FS
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DP
type: SiteQuality
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MQ
type: SiteQuality
SIO_000300: 6.0e1

VQSLOD
type: SiteQuality
SIO_000300: 6.22e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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bin: 8.75e1
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South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Other
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allele frequency: 0.0e0
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East Asian
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allele count: 2
allele frequency: 2.320724065908564e-4
allele num: 8618
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

BaseQRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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MQ
type: SiteQuality
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DP
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QD
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 8.869e0

VQSLOD
type: SiteQuality
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InbreedingCoeff
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MQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
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allele frequency: 0.0e0
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East Asian
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allele frequency: 0.0e0
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South Asian
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.508523155830442e-5
allele num: 66290
num of homozygotes: 0

African
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allele count: 0
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Latino
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allele count: 0
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ClippingRankSum
type: SiteQuality
SIO_000300: 3.94e-1

BaseQRankSum
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DP
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MQ
type: SiteQuality
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VQSLOD
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MQRankSum
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InbreedingCoeff
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ReadPosRankSum
type: SiteQuality
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FS
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SIO_000300: 0.0e0

QD
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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South Asian
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East Asian
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African
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Latino
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Other
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European (Finnish)
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FS
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ReadPosRankSum
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MQ
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ClippingRankSum
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DP
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BaseQRankSum
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MQRankSum
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InbreedingCoeff
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VQSLOD
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QD
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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num of homozygotes: 0

European (Non-Finnish)
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Latino
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allele num: 11514
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East Asian
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European (Finnish)
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Other
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South Asian
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DP
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ReadPosRankSum
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FS
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MQRankSum
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BaseQRankSum
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VQSLOD
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QD
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InbreedingCoeff
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MQ
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ClippingRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Non-Finnish)
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Latino
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Other
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African
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East Asian
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European (Finnish)
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QD
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ClippingRankSum
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MQ
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ReadPosRankSum
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VQSLOD
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BaseQRankSum
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MQRankSum
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InbreedingCoeff
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FS
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Non-Finnish)
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South Asian
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Other
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Latino
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East Asian
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African
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num of homozygotes: 0

European (Finnish)
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FS
type: SiteQuality
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BaseQRankSum
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SIO_000300: -1.377e0

MQ
type: SiteQuality
SIO_000300: 5.939e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.0e-4

ClippingRankSum
type: SiteQuality
SIO_000300: -1.588e0

VQSLOD
type: SiteQuality
SIO_000300: 5.92e-1

DP
type: SiteQuality
SIO_000300: 2.362503e6

MQRankSum
type: SiteQuality
SIO_000300: -7.4e-2

QD
type: SiteQuality
SIO_000300: 1.384e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.36e0

GenotypeQuality
all individuals: 42
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2428
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 28
bin: 3.75e1
variant carriers: 0

GenotypeQuality
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bin: 6.25e1
variant carriers: 0

GenotypeQuality
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bin: 7.5e0
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GenotypeQuality
all individuals: 3706
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3398
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6815
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5195
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 6
bin: 5.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10202
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16434
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66192
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8616
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.695652173913044e-5
allele num: 11500
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.086e1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.02e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.34e-1

VQSLOD
type: SiteQuality
SIO_000300: 8.169999999999999e-1

DP
type: SiteQuality
SIO_000300: 2.361517e6

FS
type: SiteQuality
SIO_000300: 1.867e0

MQ
type: SiteQuality
SIO_000300: 5.943e1

ClippingRankSum
type: SiteQuality
SIO_000300: 8.06e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.29e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

GenotypeQuality
all individuals: 4
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4667
bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 3.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20567
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3397
bin: 7.25e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10186
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.085686465433301e-5
allele num: 16432
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66176
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11498
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 1.19e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

QD
type: SiteQuality
SIO_000300: 1.29e1

VQSLOD
type: SiteQuality
SIO_000300: 5.73e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

DP
type: SiteQuality
SIO_000300: 2.361229e6

FS
type: SiteQuality
SIO_000300: 5.917e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.434e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.06e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 4.47e0

GenotypeQuality
all individuals: 63
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 0
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 20566
bin: 9.75e1
variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 9
bin: 4.25e1
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GenotypeQuality
all individuals: 3705
bin: 9.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
all individuals: 18
bin: 1.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 83
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variant carriers: 0

GenotypeQuality
all individuals: 5191
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variant carriers: 0

GenotypeQuality
all individuals: 3396
bin: 7.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16424
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.823182711198428e-5
allele num: 10180
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11498
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66132
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 4.14e0

VQSLOD
type: SiteQuality
SIO_000300: -2.763e0

DP
type: SiteQuality
SIO_000300: 2.360377e6

MQRankSum
type: SiteQuality
SIO_000300: -2.109e0

FS
type: SiteQuality
SIO_000300: 0.0e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 5.725e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.06e0

ClippingRankSum
type: SiteQuality
SIO_000300: 4.1e-2

QD
type: SiteQuality
SIO_000300: 1.279e1

GenotypeQuality
all individuals: 65
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 21
bin: 1.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3
bin: 2.5e0
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GenotypeQuality
all individuals: 14
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 554
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variant carriers: 0

GenotypeQuality
all individuals: 30
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13083
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variant carriers: 0

GenotypeQuality
all individuals: 54
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3392
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20564
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 6810
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3705
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variant carriers: 0

GenotypeQuality
all individuals: 9
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variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.512172992590352e-5
allele num: 66130
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10180
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11498
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8612
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16420
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 0.0e0

VQSLOD
type: SiteQuality
SIO_000300: -1.934e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.0e-4

MQ
type: SiteQuality
SIO_000300: 5.803e1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.12e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.79e-1

QD
type: SiteQuality
SIO_000300: 8.77e0

MQRankSum
type: SiteQuality
SIO_000300: -8.999999999999999e-3

DP
type: SiteQuality
SIO_000300: 2.360346e6

BaseQRankSum
type: SiteQuality
SIO_000300: -5.27e-1

GenotypeQuality
all individuals: 6744
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5177
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 43
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variant carriers: 0

GenotypeQuality
all individuals: 9
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variant carriers: 0

GenotypeQuality
all individuals: 34
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 121
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variant carriers: 0

GenotypeQuality
all individuals: 20563
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 77
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variant carriers: 0

GenotypeQuality
all individuals: 2426
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3381
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3707
bin: 9.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.028100775193798e-5
allele num: 66048
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10160
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16414
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11488
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -3.19e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.3e-3

VQSLOD
type: SiteQuality
SIO_000300: 2.95e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 5.972e1

MQRankSum
type: SiteQuality
SIO_000300: -4.6e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.05e-1

DP
type: SiteQuality
SIO_000300: 2.357842e6

QD
type: SiteQuality
SIO_000300: 1.556e1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.4e-1

GenotypeQuality
all individuals: 12811
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3381
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 98
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 127
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 6737
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2425
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3704
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 55
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20566
bin: 9.75e1
variant carriers: 2

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16410
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.028834504482675e-5
allele num: 66032
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11484
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10160
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8610
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.72e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.43e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.59e0

FS
type: SiteQuality
SIO_000300: 9.95e-1

QD
type: SiteQuality
SIO_000300: 1.307e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.5e-3

MQRankSum
type: SiteQuality
SIO_000300: 1.11e0

MQ
type: SiteQuality
SIO_000300: 5.967e1

ClippingRankSum
type: SiteQuality
SIO_000300: 7.199999999999999e-2

DP
type: SiteQuality
SIO_000300: 2.35731e6

GenotypeQuality
all individuals: 124
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 65
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3376
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2424
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 20564
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 86
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variant carriers: 0

GenotypeQuality
all individuals: 12491
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variant carriers: 0

GenotypeQuality
all individuals: 129
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 112
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4667
bin: 8.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16404
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10144
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11478
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 66006
num of homozygotes: 0

East Asian
type: Population
allele count: 2
allele frequency: 2.322880371660859e-4
allele num: 8610
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 902
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

FS
type: SiteQuality
SIO_000300: 2.868e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.88e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.657e0

DP
type: SiteQuality
SIO_000300: 2.355082e6

QD
type: SiteQuality
SIO_000300: 1.119e1

MQRankSum
type: SiteQuality
SIO_000300: 2.84e-1

MQ
type: SiteQuality
SIO_000300: 5.942e1

VQSLOD
type: SiteQuality
SIO_000300: 1.03e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.72e-1

GenotypeQuality
all individuals: 4664
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 6667
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10
bin: 2.5e0
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GenotypeQuality
all individuals: 196
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3703
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 20564
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 3371
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 513
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2424
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 141
bin: 2.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 9.861932938856015e-5
allele num: 10140
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.161710037174721e-4
allele num: 8608
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65992
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 900
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11478
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16402
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 7.09e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.89e0

FS
type: SiteQuality
SIO_000300: 2.64e0

DP
type: SiteQuality
SIO_000300: 2.353743e6

BaseQRankSum
type: SiteQuality
SIO_000300: -4.12e-1

VQSLOD
type: SiteQuality
SIO_000300: 1.36e0

QD
type: SiteQuality
SIO_000300: 1.097e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.6e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.0e-4

MQ
type: SiteQuality
SIO_000300: 5.919e1

GenotypeQuality
all individuals: 2948
bin: 9.25e1
variant carriers: 56

GenotypeQuality
all individuals: 245
bin: 3.25e1
variant carriers: 10

GenotypeQuality
all individuals: 206
bin: 3.75e1
variant carriers: 11

GenotypeQuality
all individuals: 100
bin: 4.25e1
variant carriers: 5

GenotypeQuality
all individuals: 89
bin: 5.25e1
variant carriers: 10

GenotypeQuality
all individuals: 5924
bin: 6.75e1
variant carriers: 19

GenotypeQuality
all individuals: 2898
bin: 7.25e1
variant carriers: 18

GenotypeQuality
all individuals: 452
bin: 2.25e1
variant carriers: 16

GenotypeQuality
all individuals: 11296
bin: 6.25e1
variant carriers: 19

GenotypeQuality
all individuals: 1972
bin: 8.75e1
variant carriers: 32

Other
type: Population
allele count: 84
allele frequency: 9.354120267260579e-2
allele num: 898
num of homozygotes: 5

Latino
type: Population
allele count: 1117
allele frequency: 9.745245157913104e-2
allele num: 11462
num of homozygotes: 36

South Asian
type: Population
allele count: 1140
allele frequency: 6.95376357203855e-2
allele num: 16394
num of homozygotes: 57

African
type: Population
allele count: 2788
allele frequency: 2.754940711462451e-1
allele num: 10120
num of homozygotes: 383

European (Non-Finnish)
type: Population
allele count: 6190
allele frequency: 9.387321807703973e-2
allele num: 65940
num of homozygotes: 288

East Asian
type: Population
allele count: 1395
allele frequency: 1.623603351955307e-1
allele num: 8592
num of homozygotes: 128

European (Finnish)
type: Population
allele count: 384
allele frequency: 5.811138014527845e-2
allele num: 6608
num of homozygotes: 11

FS
type: SiteQuality
SIO_000300: 1.554e0

DP
type: SiteQuality
SIO_000300: 2.482841e6

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.33e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.77e-1

MQ
type: SiteQuality
SIO_000300: 5.97e1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.402e0

MQRankSum
type: SiteQuality
SIO_000300: 8.0e-2

QD
type: SiteQuality
SIO_000300: 1.426e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.41e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.72e0

GenotypeQuality
all individuals: 91
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5924
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 146
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2898
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3808
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2948
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4378
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 11296
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 25688
bin: 9.75e1
variant carriers: 9

GenotypeQuality
all individuals: 100
bin: 4.25e1
variant carriers: 0

Latino
type: Population
allele count: 2
allele frequency: 1.744896178677369e-4
allele num: 11462
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 9.881422924901186e-5
allele num: 10120
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 6
allele frequency: 9.099181073703367e-5
allele num: 65940
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8592
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16394
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 4.72e0

MQ
type: SiteQuality
SIO_000300: 5.97e1

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.33e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -3.402e0

FS
type: SiteQuality
SIO_000300: 1.554e0

QD
type: SiteQuality
SIO_000300: 1.426e1

MQRankSum
type: SiteQuality
SIO_000300: 8.0e-2

DP
type: SiteQuality
SIO_000300: 2.482841e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.77e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.41e-1

GenotypeQuality
all individuals: 565
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 237
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 3549
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 4653
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2333
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 12991
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 500
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 16718
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5226
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 819
bin: 4.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65856
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10076
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 8.724480893386844e-5
allele num: 11462
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8590
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16370
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.1e-3

DP
type: SiteQuality
SIO_000300: 2.235188e6

FS
type: SiteQuality
SIO_000300: 0.0e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.99e0

MQRankSum
type: SiteQuality
SIO_000300: -1.59e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.02e-1

VQSLOD
type: SiteQuality
SIO_000300: 2.27e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.88e-1

MQ
type: SiteQuality
SIO_000300: 6.0e1

QD
type: SiteQuality
SIO_000300: 1.709e1

GenotypeQuality
all individuals: 48
bin: 2.5e0
variant carriers: 0

GenotypeQuality
all individuals: 4579
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 476
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 976
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 176
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 16758
bin: 9.75e1
variant carriers: 74

GenotypeQuality
all individuals: 5978
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2048
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2314
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5073
bin: 7.75e1
variant carriers: 0

African
type: Population
allele count: 9
allele frequency: 8.957006369426752e-4
allele num: 10048
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

Latino
type: Population
allele count: 35
allele frequency: 3.056768558951965e-3
allele num: 11450
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8582
num of homozygotes: 0

Other
type: Population
allele count: 5
allele frequency: 5.592841163310962e-3
allele num: 894
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 6.12294881214793e-5
allele num: 16332
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 24
allele frequency: 3.65118967930384e-4
allele num: 65732
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.58e-1

QD
type: SiteQuality
SIO_000300: 1.407e1

DP
type: SiteQuality
SIO_000300: 2.209541e6

BaseQRankSum
type: SiteQuality
SIO_000300: -3.272e0

VQSLOD
type: SiteQuality
SIO_000300: 6.16e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.7e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 6.0e1

MQRankSum
type: SiteQuality
SIO_000300: 2.63e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 9.7e-2