4-190873388-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190873388
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 190873388
    reference: chr 4
allele count: 7
allele frequency: 5.853136444972156e-5
allele num: 119594
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435943
  ensembl transcript: ENST00000531991
  gene symbol: FRG1
  hgvsc: ENST00000531991.2:c.16T>A
  hgvsp: ENSP00000435943.1:p.Tyr6Asn
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435067
  ensembl transcript: ENST00000524583
  gene symbol: FRG1
  hgvsc: ENST00000524583.1:c.-7T>A
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000226798
  ensembl transcript: ENST00000226798
  gene symbol: FRG1
  hgvsc: ENST00000226798.4:c.205T>A
  hgvsp: ENSP00000226798.4:p.Tyr69Asn
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000109536
  ensembl transcript: ENST00000514482
  gene symbol: FRG1
  hgvsc: ENST00000514482.1:n.191T>A
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000436535
  ensembl transcript: ENST00000533157
  gene symbol: FRG1
  hgvsc: ENST00000533157.1:c.*248T>A
  variant of: http://identifiers.org/hgnc/3954
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 54
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1308
  bin: 9.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 12655
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5754
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 424
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5314
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 828
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6356
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5921
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 850
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3674
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4759
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2710
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1250
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5694
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1860
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1580
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1472
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11585
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1214
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2380
  bin: 9.25e1
  variant carriers: 0
hgvs: p.Tyr69Asn
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: FS
site quality: DP
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum

4-190873393-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190873393
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 190873393
    reference: chr 4
allele count: 1
allele frequency: 8.366520531441385e-6
allele num: 119524
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000436535
  ensembl transcript: ENST00000533157
  gene symbol: FRG1
  hgvsc: ENST00000533157.1:c.*253A>G
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435943
  ensembl transcript: ENST00000531991
  gene symbol: FRG1
  hgvsc: ENST00000531991.2:c.21A>G
  hgvsp: ENSP00000435943.1:p.Ile7Met
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435067
  ensembl transcript: ENST00000524583
  gene symbol: FRG1
  hgvsc: ENST00000524583.1:c.-2A>G
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000226798
  ensembl transcript: ENST00000226798
  gene symbol: FRG1
  hgvsc: ENST00000226798.4:c.210A>G
  hgvsp: ENSP00000226798.4:p.Ile70Met
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000109536
  ensembl transcript: ENST00000514482
  gene symbol: FRG1
  hgvsc: ENST00000514482.1:n.196A>G
  variant of: http://identifiers.org/hgnc/3954
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12475
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4760
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 81
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5918
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1251
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 270
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 858
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6331
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1303
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3674
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2710
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 173
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1860
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 495
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5753
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5694
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5315
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1579
  bin: 7.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 0
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genotype quality: GenotypeQuality
  all individuals: 19
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2436
  bin: 7.75e1
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genotype quality: GenotypeQuality
  all individuals: 2396
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1336
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 2381
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
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genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
hgvs: p.Ile70Met
num of homozygotes: 0
population: East Asian
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: Other
population: African
reference allele: A
site quality: VQSLOD
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: MQ

http://identifiers.org/exac.variant/4-190873394-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190873394
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 190873394
    reference: chr 4
allele count: 1
allele frequency: 8.367640660039494e-6
allele num: 119508
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435943
  ensembl transcript: ENST00000531991
  gene symbol: FRG1
  hgvsc: ENST00000531991.2:c.22C>A
  hgvsp: ENSP00000435943.1:p.His8Asn
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000109536
  ensembl transcript: ENST00000514482
  gene symbol: FRG1
  hgvsc: ENST00000514482.1:n.197C>A
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000436535
  ensembl transcript: ENST00000533157
  gene symbol: FRG1
  hgvsc: ENST00000533157.1:c.*254C>A
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000226798
  ensembl transcript: ENST00000226798
  gene symbol: FRG1
  hgvsc: ENST00000226798.4:c.211C>A
  hgvsp: ENSP00000226798.4:p.His71Asn
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435067
  ensembl transcript: ENST00000524583
  gene symbol: FRG1
  hgvsc: ENST00000524583.1:c.-1C>A
  variant of: http://identifiers.org/hgnc/3954
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12456
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5694
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5314
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5753
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6325
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5916
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 187
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3674
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 851
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1304
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 1250
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 530
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genotype depth: GenotypeDepth
  all individuals: 2710
  bin: 6.25e1
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genotype depth: GenotypeDepth
  all individuals: 4760
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 1342
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 13
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
hgvs: p.His71Asn
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: South Asian
population: East Asian
population: European (Finnish)
population: Latino
population: African
reference allele: C
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: FS
site quality: QD
site quality: DP

4-190873394-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190873394
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 190873394
    reference: chr 4
allele count: 2
allele frequency: 1.673528132007899e-5
allele num: 119508
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435943
  ensembl transcript: ENST00000531991
  gene symbol: FRG1
  hgvsc: ENST00000531991.2:c.22C>T
  hgvsp: ENSP00000435943.1:p.His8Tyr
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: 5_prime_UTR_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435067
  ensembl transcript: ENST00000524583
  gene symbol: FRG1
  hgvsc: ENST00000524583.1:c.-1C>T
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000226798
  ensembl transcript: ENST00000226798
  gene symbol: FRG1
  hgvsc: ENST00000226798.4:c.211C>T
  hgvsp: ENSP00000226798.4:p.His71Tyr
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000436535
  ensembl transcript: ENST00000533157
  gene symbol: FRG1
  hgvsc: ENST00000533157.1:c.*254C>T
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000109536
  ensembl transcript: ENST00000514482
  gene symbol: FRG1
  hgvsc: ENST00000514482.1:n.197C>T
  variant of: http://identifiers.org/hgnc/3954
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 2710
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5694
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 95
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5916
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4760
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12456
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1860
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3674
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  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1304
  bin: 9.75e1
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genotype depth: GenotypeDepth
  all individuals: 187
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1250
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3246
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34170
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
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  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1470
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1342
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2436
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 5.25e1
  variant carriers: 0
hgvs: p.His71Tyr
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: C
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: QD
site quality: DP
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS

4-190873398-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190873398
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 190873398
    reference: chr 4
allele count: 1
allele frequency: 8.37184381488179e-6
allele num: 119448
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000226798
  ensembl transcript: ENST00000226798
  gene symbol: FRG1
  hgvsc: ENST00000226798.4:c.215C>T
  hgvsp: ENSP00000226798.4:p.Ala72Val
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435067
  ensembl transcript: ENST00000524583
  gene symbol: FRG1
  hgvsc: ENST00000524583.1:c.4C>T
  hgvsp: ENSP00000435067.1:p.His2Tyr
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435943
  ensembl transcript: ENST00000531991
  gene symbol: FRG1
  hgvsc: ENST00000531991.2:c.26C>T
  hgvsp: ENSP00000435943.1:p.Ala9Val
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000109536
  ensembl transcript: ENST00000514482
  gene symbol: FRG1
  hgvsc: ENST00000514482.1:n.201C>T
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000436535
  ensembl transcript: ENST00000533157
  gene symbol: FRG1
  hgvsc: ENST00000533157.1:c.*258C>T
  variant of: http://identifiers.org/hgnc/3954
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 526
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5695
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 131
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5753
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3674
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5916
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1250
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4761
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6311
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 828
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2710
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12382
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1304
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1860
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5314
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2396
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1351
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1579
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2436
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 188
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3243
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Ala72Val
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: Other
population: African
population: European (Finnish)
population: South Asian
population: Latino
reference allele: C
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP

4-190873399-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190873399
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 190873399
    reference: chr 4
allele count: 1
allele frequency: 8.372965369415233e-6
allele num: 119432
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000436535
  ensembl transcript: ENST00000533157
  gene symbol: FRG1
  hgvsc: ENST00000533157.1:c.*259A>G
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435067
  ensembl transcript: ENST00000524583
  gene symbol: FRG1
  hgvsc: ENST00000524583.1:c.5A>G
  hgvsp: ENSP00000435067.1:p.His2Arg
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000226798
  ensembl transcript: ENST00000226798
  gene symbol: FRG1
  hgvsc: ENST00000226798.4:c.216A>G
  hgvsp: ENST00000226798.4:c.216A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435943
  ensembl transcript: ENST00000531991
  gene symbol: FRG1
  hgvsc: ENST00000531991.2:c.27A>G
  hgvsp: ENST00000531991.2:c.27A>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000109536
  ensembl transcript: ENST00000514482
  gene symbol: FRG1
  hgvsc: ENST00000514482.1:n.202A>G
  variant of: http://identifiers.org/hgnc/3954
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 239
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5917
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5314
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1860
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6301
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12374
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5694
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1250
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1305
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2710
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4760
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3674
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5752
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34169
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1470
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1579
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 52
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2396
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2436
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11264
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1317
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 232
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1
  bin: 2.5e0
  variant carriers: 0
hgvs: p.His2Arg
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: African
population: Other
population: Latino
population: European (Finnish)
population: South Asian
reference allele: A
site quality: MQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD

4-190873403-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190873403
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 190873403
    reference: chr 4
allele count: 2
allele frequency: 1.676586469947188e-5
allele num: 119290
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435067
  ensembl transcript: ENST00000524583
  gene symbol: FRG1
  hgvsc: ENST00000524583.1:c.9G>A
  hgvsp: ENST00000524583.1:c.9G>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000436535
  ensembl transcript: ENST00000533157
  gene symbol: FRG1
  hgvsc: ENST00000533157.1:c.*263G>A
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000109536
  ensembl transcript: ENST00000514482
  gene symbol: FRG1
  hgvsc: ENST00000514482.1:n.206G>A
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435943
  ensembl transcript: ENST00000531991
  gene symbol: FRG1
  hgvsc: ENST00000531991.2:c.31G>A
  hgvsp: ENSP00000435943.1:p.Asp11Asn
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000226798
  ensembl transcript: ENST00000226798
  gene symbol: FRG1
  hgvsc: ENST00000226798.4:c.220G>A
  hgvsp: ENSP00000226798.4:p.Asp74Asn
  variant of: http://identifiers.org/hgnc/3954
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 210
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5752
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 528
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12348
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 214
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5694
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1250
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 821
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5314
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1305
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3674
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6282
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4759
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1860
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5917
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2710
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 831
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2395
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3244
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1231
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 354
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1580
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11213
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1470
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Asp74Asn
num of homozygotes: 0
population: Other
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: East Asian
population: African
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQ
site quality: MQRankSum
site quality: DP

4-190873410-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190873410
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 190873410
    reference: chr 4
allele count: 16
allele frequency: 1.34748189321206e-4
allele num: 118740
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000226798
  ensembl transcript: ENST00000226798
  gene symbol: FRG1
  hgvsc: ENST00000226798.4:c.227G>T
  hgvsp: ENSP00000226798.4:p.Gly76Val
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435943
  ensembl transcript: ENST00000531991
  gene symbol: FRG1
  hgvsc: ENST00000531991.2:c.38G>T
  hgvsp: ENSP00000435943.1:p.Gly13Val
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000436535
  ensembl transcript: ENST00000533157
  gene symbol: FRG1
  hgvsc: ENST00000533157.1:c.*270G>T
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000109536
  ensembl transcript: ENST00000514482
  gene symbol: FRG1
  hgvsc: ENST00000514482.1:n.213G>T
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435067
  ensembl transcript: ENST00000524583
  gene symbol: FRG1
  hgvsc: ENST00000524583.1:c.16G>T
  hgvsp: ENSP00000435067.1:p.Val6Phe
  variant of: http://identifiers.org/hgnc/3954
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12287
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 425
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5690
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5313
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5752
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 891
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1858
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4758
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2709
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3672
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1320
  bin: 9.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 356
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 442
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6266
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 136
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 831
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5913
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1250
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 878
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1579
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 79
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2436
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 63
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3243
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1470
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 658
  bin: 7.5e0
  variant carriers: 0
hgvs: p.Gly76Val
num of homozygotes: 0
population: East Asian
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
reference allele: G
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: DP

4-190873411-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190873411
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 190873411
    reference: chr 4
allele count: 3
allele frequency: 2.53318471982977e-5
allele num: 118428
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000109536
  ensembl transcript: ENST00000514482
  gene symbol: FRG1
  hgvsc: ENST00000514482.1:n.214T>C
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435943
  ensembl transcript: ENST00000531991
  gene symbol: FRG1
  hgvsc: ENST00000531991.2:c.39T>C
  hgvsp: ENST00000531991.2:c.39T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000226798
  ensembl transcript: ENST00000226798
  gene symbol: FRG1
  hgvsc: ENST00000226798.4:c.228T>C
  hgvsp: ENST00000226798.4:c.228T>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435067
  ensembl transcript: ENST00000524583
  gene symbol: FRG1
  hgvsc: ENST00000524583.1:c.17T>C
  hgvsp: ENSP00000435067.1:p.Val6Ala
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000436535
  ensembl transcript: ENST00000533157
  gene symbol: FRG1
  hgvsc: ENST00000533157.1:c.*271T>C
  variant of: http://identifiers.org/hgnc/3954
canonical: false
consequence: missense
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 5757
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4759
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12246
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5312
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1862
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 902
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1258
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5918
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 832
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5686
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6262
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3679
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1318
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2712
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2375
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 108
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3223
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 23
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1572
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1466
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 765
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2428
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Val6Ala
num of homozygotes: 0
population: South Asian
population: European (Non-Finnish)
population: Latino
population: African
population: Other
population: East Asian
population: European (Finnish)
reference allele: T
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum

4-190873411-TC-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190873411
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 190873410
    reference: chr 4
allele count: 2
allele frequency: 1.688789813219847e-5
allele num: 118428
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000109536
  ensembl transcript: ENST00000514482
  gene symbol: FRG1
  hgvsc: ENST00000514482.1:n.215delC
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: true
  consequence: frameshift_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000226798
  ensembl transcript: ENST00000226798
  gene symbol: FRG1
  hgvsc: ENST00000226798.4:c.229delC
  hgvsp: ENSP00000226798.4:p.Leu77PhefsTer33
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435943
  ensembl transcript: ENST00000531991
  gene symbol: FRG1
  hgvsc: ENST00000531991.2:c.40delC
  hgvsp: ENSP00000435943.1:p.Leu14PhefsTer33
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: frameshift_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435067
  ensembl transcript: ENST00000524583
  gene symbol: FRG1
  hgvsc: ENST00000524583.1:c.18delC
  hgvsp: ENSP00000435067.1:p.Leu8TyrfsTer30
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000436535
  ensembl transcript: ENST00000533157
  gene symbol: FRG1
  hgvsc: ENST00000533157.1:c.*272delC
  variant of: http://identifiers.org/hgnc/3954
canonical: true
consequence: frameshift
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 5757
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 109
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 416
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 902
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3679
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 4759
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5918
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5686
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 832
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1258
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2712
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 397
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1318
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12246
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6262
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 426
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5312
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1862
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 765
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 66
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2386
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 18
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2428
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1572
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11104
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 21
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 719
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1466
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Leu77PhefsTer33
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: European (Non-Finnish)
population: Other
reference allele: TC
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: MQRankSum
site quality: ClippingRankSum
site quality: QD
site quality: FS
site quality: VQSLOD
site quality: MQ

4-190873413-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190873413
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 190873413
    reference: chr 4
allele count: 4
allele frequency: 3.381577167590964e-5
allele num: 118288
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000109536
  ensembl transcript: ENST00000514482
  gene symbol: FRG1
  hgvsc: ENST00000514482.1:n.216T>G
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435067
  ensembl transcript: ENST00000524583
  gene symbol: FRG1
  hgvsc: ENST00000524583.1:c.19T>G
  hgvsp: ENSP00000435067.1:p.Phe7Val
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435943
  ensembl transcript: ENST00000531991
  gene symbol: FRG1
  hgvsc: ENST00000531991.2:c.41T>G
  hgvsp: ENSP00000435943.1:p.Leu14Arg
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000226798
  ensembl transcript: ENST00000226798
  gene symbol: FRG1
  hgvsc: ENST00000226798.4:c.230T>G
  hgvsp: ENSP00000226798.4:p.Leu77Arg
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000436535
  ensembl transcript: ENST00000533157
  gene symbol: FRG1
  hgvsc: ENST00000533157.1:c.*273T>G
  variant of: http://identifiers.org/hgnc/3954
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 12247
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 361
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5685
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6285
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1859
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 59
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 910
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5915
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4759
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 485
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1256
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5309
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3672
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5752
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1297
  bin: 9.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2717
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 834
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 761
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1469
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 29
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2437
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2390
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2375
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 88
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 636
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 123
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11149
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 45
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Leu77Arg
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: Other
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: VQSLOD
site quality: DP
site quality: QD

http://identifiers.org/exac.variant/4-190873419-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190873419
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 190873419
    reference: chr 4
allele count: 1
allele frequency: 8.458376330079678e-6
allele num: 118226
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000109536
  ensembl transcript: ENST00000514482
  gene symbol: FRG1
  hgvsc: ENST00000514482.1:n.222C>A
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435067
  ensembl transcript: ENST00000524583
  gene symbol: FRG1
  hgvsc: ENST00000524583.1:c.25C>A
  hgvsp: ENSP00000435067.1:p.Pro9Thr
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435943
  ensembl transcript: ENST00000531991
  gene symbol: FRG1
  hgvsc: ENST00000531991.2:c.47C>A
  hgvsp: ENSP00000435943.1:p.Thr16Asn
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000436535
  ensembl transcript: ENST00000533157
  gene symbol: FRG1
  hgvsc: ENST00000533157.1:c.*279C>A
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000226798
  ensembl transcript: ENST00000226798
  gene symbol: FRG1
  hgvsc: ENST00000226798.4:c.236C>A
  hgvsp: ENSP00000226798.4:p.Thr79Asn
  variant of: http://identifiers.org/hgnc/3954
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 602
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6279
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4758
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5310
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3671
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1256
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5912
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12230
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2718
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 834
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5685
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1859
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5753
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1294
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 818
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 25
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1583
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2437
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 692
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 76
  bin: 1.75e1
  variant carriers: 0
hgvs: p.Thr79Asn
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Latino
population: African
population: East Asian
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP
site quality: QD
site quality: MQ
site quality: ReadPosRankSum

4-190873420-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190873420
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 190873420
    reference: chr 4
allele count: 10
allele frequency: 8.466970348669839e-5
allele num: 118106
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435067
  ensembl transcript: ENST00000524583
  gene symbol: FRG1
  hgvsc: ENST00000524583.1:c.26C>T
  hgvsp: ENSP00000435067.1:p.Pro9Leu
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435943
  ensembl transcript: ENST00000531991
  gene symbol: FRG1
  hgvsc: ENST00000531991.2:c.48C>T
  hgvsp: ENST00000531991.2:c.48C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000436535
  ensembl transcript: ENST00000533157
  gene symbol: FRG1
  hgvsc: ENST00000533157.1:c.*280C>T
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000226798
  ensembl transcript: ENST00000226798
  gene symbol: FRG1
  hgvsc: ENST00000226798.4:c.237C>T
  hgvsp: ENST00000226798.4:c.237C>T(p.%3D)
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000109536
  ensembl transcript: ENST00000514482
  gene symbol: FRG1
  hgvsc: ENST00000514482.1:n.223C>T
  variant of: http://identifiers.org/hgnc/3954
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5685
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 530
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6272
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 834
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4757
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3669
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5751
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12218
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 43
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5912
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5309
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1859
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2717
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 271
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1302
  bin: 9.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1256
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34156
  bin: 9.75e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 3239
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 841
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2374
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2436
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 132
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11099
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 2.5e0
  variant carriers: 0
hgvs: p.Pro9Leu
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: Other
population: European (Non-Finnish)
population: European (Finnish)
population: African
reference allele: C
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: QD

4-190873421-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190873421
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 190873421
    reference: chr 4
allele count: 3
allele frequency: 2.539833048307624e-5
allele num: 118118
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000109536
  ensembl transcript: ENST00000514482
  gene symbol: FRG1
  hgvsc: ENST00000514482.1:n.224C>G
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000226798
  ensembl transcript: ENST00000226798
  gene symbol: FRG1
  hgvsc: ENST00000226798.4:c.238C>G
  hgvsp: ENSP00000226798.4:p.Leu80Val
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435943
  ensembl transcript: ENST00000531991
  gene symbol: FRG1
  hgvsc: ENST00000531991.2:c.49C>G
  hgvsp: ENSP00000435943.1:p.Leu17Val
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000436535
  ensembl transcript: ENST00000533157
  gene symbol: FRG1
  hgvsc: ENST00000533157.1:c.*281C>G
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435067
  ensembl transcript: ENST00000524583
  gene symbol: FRG1
  hgvsc: ENST00000524583.1:c.27C>G
  hgvsp: ENST00000524583.1:c.27C>G(p.%3D)
  variant of: http://identifiers.org/hgnc/3954
canonical: true
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5684
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5751
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1298
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4757
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3670
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 279
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 891
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6275
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12216
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 668
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5911
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1859
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5308
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 836
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1257
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2717
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1584
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2390
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34155
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 844
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 689
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 44
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2436
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11105
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 43
  bin: 2.75e1
  variant carriers: 0
hgvs: p.Leu80Val
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: Other
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: ReadPosRankSum

4-190873423-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190873423
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 190873423
    reference: chr 4
allele count: 1
allele frequency: 8.464820207218798e-6
allele num: 118136
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435067
  ensembl transcript: ENST00000524583
  gene symbol: FRG1
  hgvsc: ENST00000524583.1:c.29G>C
  hgvsp: ENSP00000435067.1:p.Trp10Ser
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435943
  ensembl transcript: ENST00000531991
  gene symbol: FRG1
  hgvsc: ENST00000531991.2:c.51G>C
  hgvsp: ENST00000531991.2:c.51G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000436535
  ensembl transcript: ENST00000533157
  gene symbol: FRG1
  hgvsc: ENST00000533157.1:c.*283G>C
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000109536
  ensembl transcript: ENST00000514482
  gene symbol: FRG1
  hgvsc: ENST00000514482.1:n.226G>C
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000226798
  ensembl transcript: ENST00000226798
  gene symbol: FRG1
  hgvsc: ENST00000226798.4:c.240G>C
  hgvsp: ENST00000226798.4:c.240G>C(p.%3D)
  variant of: http://identifiers.org/hgnc/3954
canonical: false
consequence: missense
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 3670
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12214
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1257
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 276
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5308
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5684
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 38
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 888
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5911
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 685
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5751
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6274
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1296
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4757
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 836
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1860
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2718
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11108
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2374
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1583
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3237
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2390
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 853
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Trp10Ser
num of homozygotes: 0
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
population: African
population: European (Finnish)
population: South Asian
reference allele: G
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: QD
site quality: MQ
site quality: BaseQRankSum

4-190873425-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190873425
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 190873425
    reference: chr 4
allele count: 1
allele frequency: 8.467974121871083e-6
allele num: 118092
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000226798
  ensembl transcript: ENST00000226798
  gene symbol: FRG1
  hgvsc: ENST00000226798.4:c.242G>T
  hgvsp: ENSP00000226798.4:p.Gly81Val
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: stop_gained
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435067
  ensembl transcript: ENST00000524583
  gene symbol: FRG1
  hgvsc: ENST00000524583.1:c.31G>T
  hgvsp: ENSP00000435067.1:p.Glu11Ter
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435943
  ensembl transcript: ENST00000531991
  gene symbol: FRG1
  hgvsc: ENST00000531991.2:c.53G>T
  hgvsp: ENSP00000435943.1:p.Gly18Val
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000436535
  ensembl transcript: ENST00000533157
  gene symbol: FRG1
  hgvsc: ENST00000533157.1:c.*285G>T
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000109536
  ensembl transcript: ENST00000514482
  gene symbol: FRG1
  hgvsc: ENST00000514482.1:n.228G>T
  variant of: http://identifiers.org/hgnc/3954
canonical: false
consequence: stop gained
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 836
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 41
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 272
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3669
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4757
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12206
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5308
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1860
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6270
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 256
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5911
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5751
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2718
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5684
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1297
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1257
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 891
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 92
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2374
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 40
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 726
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11095
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 42
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2390
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2435
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 857
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 89
  bin: 1.25e1
  variant carriers: 0
hgvs: p.Glu11Ter
num of homozygotes: 0
population: South Asian
population: African
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Latino
reference allele: G
site quality: MQ
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: VQSLOD
site quality: QD

4-190873436-AAAG-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190873436
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 190873433
    reference: chr 4
allele count: 12
allele frequency: 1.01864113272894e-4
allele num: 117804
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: inframe_deletion
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000226798
  ensembl transcript: ENST00000226798
  gene symbol: FRG1
  hgvsc: ENST00000226798.4:c.257_259delAAG
  hgvsp: ENSP00000226798.4:p.Glu86del
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000436535
  ensembl transcript: ENST00000533157
  gene symbol: FRG1
  hgvsc: ENST00000533157.1:c.*300_*302delAAG
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435943
  ensembl transcript: ENST00000531991
  gene symbol: FRG1
  hgvsc: ENST00000531991.2:c.68_70delAAG
  hgvsp: ENSP00000435943.1:p.Glu23del
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000109536
  ensembl transcript: ENST00000514482
  gene symbol: FRG1
  hgvsc: ENST00000514482.1:n.243_245delAAG
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: inframe_deletion
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435067
  ensembl transcript: ENST00000524583
  gene symbol: FRG1
  hgvsc: ENST00000524583.1:c.46_48delAAG
  hgvsp: ENSP00000435067.1:p.Lys16del
  variant of: http://identifiers.org/hgnc/3954
canonical: true
consequence: inframe deletion
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 62
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3672
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 765
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5756
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1867
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5905
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12116
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 217
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4761
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5683
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 937
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6262
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2718
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5309
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1304
  bin: 9.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 1259
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 841
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 274
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 814
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 90
  bin: 1.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2424
  bin: 7.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2372
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 106
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10980
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 840
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 34122
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 27
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 3.25e1
  variant carriers: 0
hgvs: p.Glu86del
num of homozygotes: 0
population: Latino
population: Other
population: European (Non-Finnish)
population: East Asian
population: European (Finnish)
population: African
population: South Asian
reference allele: AAAG
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: VQSLOD
site quality: BaseQRankSum
site quality: MQ
site quality: QD
site quality: InbreedingCoeff
site quality: DP

4-190873447-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190873447
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 190873447
    reference: chr 4
allele count: 1
allele frequency: 8.486658972095866e-6
allele num: 117832
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000436535
  ensembl transcript: ENST00000533157
  gene symbol: FRG1
  hgvsc: ENST00000533157.1:c.*302+5G>A
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000226798
  ensembl transcript: ENST00000226798
  gene symbol: FRG1
  hgvsc: ENST00000226798.4:c.259+5G>A
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435067
  ensembl transcript: ENST00000524583
  gene symbol: FRG1
  hgvsc: ENST00000524583.1:c.48+5G>A
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435943
  ensembl transcript: ENST00000531991
  gene symbol: FRG1
  hgvsc: ENST00000531991.2:c.70+5G>A
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl transcript: ENST00000514482
  gene symbol: FRG1
  hgvsc: ENST00000514482.1:n.245+5G>A
  variant of: http://identifiers.org/hgnc/3954
canonical: true
consequence: splice region
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1301
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2716
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1865
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5751
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5679
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 955
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 790
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5311
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1260
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5900
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 88
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4757
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 250
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12048
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6252
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3669
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 837
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 111
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 13
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 831
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 871
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 55
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1466
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34155
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 10950
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2425
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2387
  bin: 8.25e1
  variant carriers: 0
hgvs: c.259+5G>A
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: Latino
population: East Asian
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum

4-190873451-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190873451
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 190873451
    reference: chr 4
allele count: 1
allele frequency: 8.486226853816256e-6
allele num: 117838
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435067
  ensembl transcript: ENST00000524583
  gene symbol: FRG1
  hgvsc: ENST00000524583.1:c.48+9C>T
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000226798
  ensembl transcript: ENST00000226798
  gene symbol: FRG1
  hgvsc: ENST00000226798.4:c.259+9C>T
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435943
  ensembl transcript: ENST00000531991
  gene symbol: FRG1
  hgvsc: ENST00000531991.2:c.70+9C>T
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl transcript: ENST00000514482
  gene symbol: FRG1
  hgvsc: ENST00000514482.1:n.245+9C>T
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000436535
  ensembl transcript: ENST00000533157
  gene symbol: FRG1
  hgvsc: ENST00000533157.1:c.*302+9C>T
  variant of: http://identifiers.org/hgnc/3954
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1300
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5752
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5891
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12016
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 942
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 800
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3669
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6243
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1259
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5312
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1866
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5678
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2716
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4759
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 838
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 107
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 35
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 14
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 68
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34156
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 10897
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2376
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 15
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 53
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 59
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2425
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1580
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 838
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 888
  bin: 2.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
population: East Asian
population: African
population: South Asian
reference allele: C
site quality: MQ
site quality: BaseQRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: FS
site quality: QD
site quality: ClippingRankSum
site quality: ReadPosRankSum

4-190873452-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190873452
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 190873452
    reference: chr 4
allele count: 1
allele frequency: 8.48824378236143e-6
allele num: 117810
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435943
  ensembl transcript: ENST00000531991
  gene symbol: FRG1
  hgvsc: ENST00000531991.2:c.70+10T>C
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000226798
  ensembl transcript: ENST00000226798
  gene symbol: FRG1
  hgvsc: ENST00000226798.4:c.259+10T>C
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000436535
  ensembl transcript: ENST00000533157
  gene symbol: FRG1
  hgvsc: ENST00000533157.1:c.*302+10T>C
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl transcript: ENST00000514482
  gene symbol: FRG1
  hgvsc: ENST00000514482.1:n.245+10T>C
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435067
  ensembl transcript: ENST00000524583
  gene symbol: FRG1
  hgvsc: ENST00000524583.1:c.48+10T>C
  variant of: http://identifiers.org/hgnc/3954
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1866
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5675
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 118
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2716
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5895
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 939
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5311
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6244
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 794
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11999
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1259
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4758
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 838
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5751
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1301
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3669
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2384
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 832
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1577
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1465
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 78
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2376
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10874
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 67
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 86
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 20
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2425
  bin: 7.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: East Asian
population: Latino
population: South Asian
population: Other
population: European (Non-Finnish)
population: European (Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: MQ

http://identifiers.org/exac.variant/4-190873456-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190873456
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 190873456
    reference: chr 4
allele count: 1
allele frequency: 8.486658972095866e-6
allele num: 117832
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000436535
  ensembl transcript: ENST00000533157
  gene symbol: FRG1
  hgvsc: ENST00000533157.1:c.*302+14A>C
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl transcript: ENST00000514482
  gene symbol: FRG1
  hgvsc: ENST00000514482.1:n.245+14A>C
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000226798
  ensembl transcript: ENST00000226798
  gene symbol: FRG1
  hgvsc: ENST00000226798.4:c.259+14A>C
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435067
  ensembl transcript: ENST00000524583
  gene symbol: FRG1
  hgvsc: ENST00000524583.1:c.48+14A>C
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435943
  ensembl transcript: ENST00000531991
  gene symbol: FRG1
  hgvsc: ENST00000531991.2:c.70+14A>C
  variant of: http://identifiers.org/hgnc/3954
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 919
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 151
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4756
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 816
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3669
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11952
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6213
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5311
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1300
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 839
  bin: 7.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1866
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 335
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1259
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5751
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5676
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5893
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2717
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 430
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 24
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2423
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 99
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34156
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 62
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 956
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 22
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 859
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 17
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 26
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1573
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2376
  bin: 9.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: South Asian
population: Latino
population: African
population: European (Finnish)
population: European (Non-Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD

4-190873460-A-ATCCC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190873460
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 190873464
    reference: chr 4
allele count: 4
allele frequency: 3.395989336593483e-5
allele num: 117786
alternate allele: ATCCC
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435067
  ensembl transcript: ENST00000524583
  gene symbol: FRG1
  hgvsc: ENST00000524583.1:c.48+18_48+19insTCCC
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl transcript: ENST00000514482
  gene symbol: FRG1
  hgvsc: ENST00000514482.1:n.245+18_245+19insTCCC
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000226798
  ensembl transcript: ENST00000226798
  gene symbol: FRG1
  hgvsc: ENST00000226798.4:c.259+18_259+19insTCCC
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435943
  ensembl transcript: ENST00000531991
  gene symbol: FRG1
  hgvsc: ENST00000531991.2:c.70+18_70+19insTCCC
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000436535
  ensembl transcript: ENST00000533157
  gene symbol: FRG1
  hgvsc: ENST00000533157.1:c.*302+18_*302+19insTCCC
  variant of: http://identifiers.org/hgnc/3954
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1302
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5887
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 431
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5749
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2718
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4756
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1259
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 791
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11882
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5309
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 919
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6197
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5682
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3668
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 837
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 396
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1866
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34154
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 51
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2426
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 974
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2384
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 73
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1464
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3174
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1574
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 80
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 100
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 31
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 126
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: African
population: Other
population: Latino
population: South Asian
reference allele: A
site quality: BaseQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: QD
site quality: MQ

4-190873464-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190873464
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 190873464
    reference: chr 4
allele count: 6
allele frequency: 5.100219309430306e-5
allele num: 117642
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435067
  ensembl transcript: ENST00000524583
  gene symbol: FRG1
  hgvsc: ENST00000524583.1:c.48+22G>T
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000436535
  ensembl transcript: ENST00000533157
  gene symbol: FRG1
  hgvsc: ENST00000533157.1:c.*302+22G>T
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435943
  ensembl transcript: ENST00000531991
  gene symbol: FRG1
  hgvsc: ENST00000531991.2:c.70+22G>T
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl transcript: ENST00000514482
  gene symbol: FRG1
  hgvsc: ENST00000514482.1:n.245+22G>T
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000226798
  ensembl transcript: ENST00000226798
  gene symbol: FRG1
  hgvsc: ENST00000226798.4:c.259+22G>T
  variant of: http://identifiers.org/hgnc/3954
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 1303
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 533
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5312
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4755
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2721
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 739
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5684
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11787
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5756
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 841
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5874
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 966
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 281
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1869
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6181
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3667
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 433
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1261
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1556
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 56
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1037
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 107
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 103
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 5.25e1
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genotype quality: GenotypeQuality
  all individuals: 706
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 91
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 158
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2416
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2378
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 113
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34124
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 50
  bin: 4.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
population: South Asian
reference allele: G
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: MQ
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP

4-190873465-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190873465
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 190873465
    reference: chr 4
allele count: 10
allele frequency: 8.512376996152405e-5
allele num: 117476
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000226798
  ensembl transcript: ENST00000226798
  gene symbol: FRG1
  hgvsc: ENST00000226798.4:c.259+23G>C
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl transcript: ENST00000514482
  gene symbol: FRG1
  hgvsc: ENST00000514482.1:n.245+23G>C
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435943
  ensembl transcript: ENST00000531991
  gene symbol: FRG1
  hgvsc: ENST00000531991.2:c.70+23G>C
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435067
  ensembl transcript: ENST00000524583
  gene symbol: FRG1
  hgvsc: ENST00000524583.1:c.48+23G>C
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000436535
  ensembl transcript: ENST00000533157
  gene symbol: FRG1
  hgvsc: ENST00000533157.1:c.*302+23G>C
  variant of: http://identifiers.org/hgnc/3954
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 11702
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 733
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 434
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3672
  bin: 5.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6157
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 839
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 283
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5757
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2728
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 959
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 477
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1321
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 264
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4756
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1262
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5879
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5311
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1874
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5671
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3105
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1032
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2369
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10406
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 682
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 180
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 112
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 105
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 70
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2367
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 215
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 149
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: South Asian
population: Latino
population: European (Non-Finnish)
population: African
population: European (Finnish)
population: Other
reference allele: G
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: FS
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP

4-190873468-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190873468
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 190873468
    reference: chr 4
allele count: 2
allele frequency: 1.698860064896454e-5
allele num: 117726
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435943
  ensembl transcript: ENST00000531991
  gene symbol: FRG1
  hgvsc: ENST00000531991.2:c.70+26G>A
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000436535
  ensembl transcript: ENST00000533157
  gene symbol: FRG1
  hgvsc: ENST00000533157.1:c.*302+26G>A
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435067
  ensembl transcript: ENST00000524583
  gene symbol: FRG1
  hgvsc: ENST00000524583.1:c.48+26G>A
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000226798
  ensembl transcript: ENST00000226798
  gene symbol: FRG1
  hgvsc: ENST00000226798.4:c.259+26G>A
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl transcript: ENST00000514482
  gene symbol: FRG1
  hgvsc: ENST00000514482.1:n.245+26G>A
  variant of: http://identifiers.org/hgnc/3954
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5681
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1869
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5754
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1266
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5304
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1311
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6143
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2723
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11622
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1019
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 835
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3670
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4765
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5878
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 150
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34233
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2380
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1459
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 752
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2418
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1087
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3120
  bin: 6.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Other
population: African
population: Latino
reference allele: G
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: MQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS

4-190873468-G-GC
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190873468
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 190873469
    reference: chr 4
allele count: 1
allele frequency: 8.494300324482272e-6
allele num: 117726
alternate allele: GC
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl transcript: ENST00000514482
  gene symbol: FRG1
  hgvsc: ENST00000514482.1:n.245+28dupC
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435067
  ensembl transcript: ENST00000524583
  gene symbol: FRG1
  hgvsc: ENST00000524583.1:c.48+28dupC
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000226798
  ensembl transcript: ENST00000226798
  gene symbol: FRG1
  hgvsc: ENST00000226798.4:c.259+28dupC
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435943
  ensembl transcript: ENST00000531991
  gene symbol: FRG1
  hgvsc: ENST00000531991.2:c.70+28dupC
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000436535
  ensembl transcript: ENST00000533157
  gene symbol: FRG1
  hgvsc: ENST00000533157.1:c.*302+28dupC
  variant of: http://identifiers.org/hgnc/3954
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6143
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5681
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 835
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1869
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3670
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5754
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5878
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 709
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1019
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 509
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11622
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5304
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2723
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4765
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1266
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1311
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 117
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 54
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 752
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 48
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2418
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 28
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1459
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 75
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 30
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 49
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10416
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1565
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1087
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 201
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: G
site quality: ReadPosRankSum
site quality: FS
site quality: DP
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: BaseQRankSum

4-190873471-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190873471
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 190873471
    reference: chr 4
allele count: 3
allele frequency: 2.549199551340879e-5
allele num: 117684
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435067
  ensembl transcript: ENST00000524583
  gene symbol: FRG1
  hgvsc: ENST00000524583.1:c.48+29A>G
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl transcript: ENST00000514482
  gene symbol: FRG1
  hgvsc: ENST00000514482.1:n.245+29A>G
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000436535
  ensembl transcript: ENST00000533157
  gene symbol: FRG1
  hgvsc: ENST00000533157.1:c.*302+29A>G
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000226798
  ensembl transcript: ENST00000226798
  gene symbol: FRG1
  hgvsc: ENST00000226798.4:c.259+29A>G
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435943
  ensembl transcript: ENST00000531991
  gene symbol: FRG1
  hgvsc: ENST00000531991.2:c.70+29A>G
  variant of: http://identifiers.org/hgnc/3954
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 4765
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6140
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3670
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1869
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1311
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 5304
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 572
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5674
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11404
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 835
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 672
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1265
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5867
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1064
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5751
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 278
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2723
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 449
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 146
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1111
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 697
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2422
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2381
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.5e0
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genotype quality: GenotypeQuality
  all individuals: 10152
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3109
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 263
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1459
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 69
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 74
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 82
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34232
  bin: 9.75e1
  variant carriers: 3
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: African
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: A
site quality: FS
site quality: BaseQRankSum
site quality: DP
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQ
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum

4-190873475-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190873475
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 190873475
    reference: chr 4
allele count: 2
allele frequency: 1.700535668735652e-5
allele num: 117610
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000226798
  ensembl transcript: ENST00000226798
  gene symbol: FRG1
  hgvsc: ENST00000226798.4:c.259+33G>A
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl transcript: ENST00000514482
  gene symbol: FRG1
  hgvsc: ENST00000514482.1:n.245+33G>A
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435943
  ensembl transcript: ENST00000531991
  gene symbol: FRG1
  hgvsc: ENST00000531991.2:c.70+33G>A
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435067
  ensembl transcript: ENST00000524583
  gene symbol: FRG1
  hgvsc: ENST00000524583.1:c.48+33G>A
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000436535
  ensembl transcript: ENST00000533157
  gene symbol: FRG1
  hgvsc: ENST00000533157.1:c.*302+33G>A
  variant of: http://identifiers.org/hgnc/3954
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 11202
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5304
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 538
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 667
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4767
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 438
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 580
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5751
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1079
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6105
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3672
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 836
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 657
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5853
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5673
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1311
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2725
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1867
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1265
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 323
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2376
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1458
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 72
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 272
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1553
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3098
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2417
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 167
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 64
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 116
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1142
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9899
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 97
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: African
population: Other
population: European (Finnish)
population: Latino
population: East Asian
population: South Asian
reference allele: G
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: QD

4-190873487-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190873487
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 190873487
    reference: chr 4
allele count: 1
allele frequency: 8.512811781731506e-6
allele num: 117470
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435067
  ensembl transcript: ENST00000524583
  gene symbol: FRG1
  hgvsc: ENST00000524583.1:c.48+45G>C
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000226798
  ensembl transcript: ENST00000226798
  gene symbol: FRG1
  hgvsc: ENST00000226798.4:c.259+45G>C
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435943
  ensembl transcript: ENST00000531991
  gene symbol: FRG1
  hgvsc: ENST00000531991.2:c.70+45G>C
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl transcript: ENST00000514482
  gene symbol: FRG1
  hgvsc: ENST00000514482.1:n.245+45G>C
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000436535
  ensembl transcript: ENST00000533157
  gene symbol: FRG1
  hgvsc: ENST00000533157.1:c.*302+45G>C
  variant of: http://identifiers.org/hgnc/3954
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 5753
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5868
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1311
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1868
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4768
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2723
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10880
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 582
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1199
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1034
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1267
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5305
  bin: 4.75e1
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genotype depth: GenotypeDepth
  all individuals: 3671
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5669
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 836
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5826
  bin: 3.25e1
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genotype depth: GenotypeDepth
  all individuals: 537
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 101
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 230
  bin: 2.75e1
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genotype quality: GenotypeQuality
  all individuals: 150
  bin: 1.25e1
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genotype quality: GenotypeQuality
  all individuals: 3000
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genotype quality: GenotypeQuality
  all individuals: 316
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 206
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 518
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2411
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 178
  bin: 2.5e0
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genotype quality: GenotypeQuality
  all individuals: 1138
  bin: 7.5e0
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genotype quality: GenotypeQuality
  all individuals: 2379
  bin: 9.25e1
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genotype quality: GenotypeQuality
  all individuals: 542
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1457
  bin: 8.75e1
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genotype quality: GenotypeQuality
  all individuals: 8707
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 475
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: Other
population: European (Finnish)
population: African
population: Latino
reference allele: G
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: MQRankSum

4-190873488-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190873488
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 190873488
    reference: chr 4
allele count: 1
allele frequency: 8.514841368505305e-6
allele num: 117442
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000436535
  ensembl transcript: ENST00000533157
  gene symbol: FRG1
  hgvsc: ENST00000533157.1:c.*302+46G>C
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435943
  ensembl transcript: ENST00000531991
  gene symbol: FRG1
  hgvsc: ENST00000531991.2:c.70+46G>C
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000226798
  ensembl transcript: ENST00000226798
  gene symbol: FRG1
  hgvsc: ENST00000226798.4:c.259+46G>C
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl transcript: ENST00000514482
  gene symbol: FRG1
  hgvsc: ENST00000514482.1:n.245+46G>C
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435067
  ensembl transcript: ENST00000524583
  gene symbol: FRG1
  hgvsc: ENST00000524583.1:c.48+46G>C
  variant of: http://identifiers.org/hgnc/3954
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 1868
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2723
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5822
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 5306
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 655
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1192
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5854
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3672
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4768
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5753
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1030
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 277
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1267
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1311
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5669
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 537
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 836
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10897
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 582
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 552
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2375
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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  bin: 2.5e0
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genotype quality: GenotypeQuality
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 329
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genotype quality: GenotypeQuality
  all individuals: 8514
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genotype quality: GenotypeQuality
  all individuals: 71
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genotype quality: GenotypeQuality
  all individuals: 1104
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 442
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 487
  bin: 3.25e1
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genotype quality: GenotypeQuality
  all individuals: 267
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 34233
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: Latino
population: Other
population: East Asian
population: European (Non-Finnish)
population: African
population: South Asian
population: European (Finnish)
reference allele: G
site quality: DP
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: InbreedingCoeff
site quality: FS
site quality: MQ
site quality: ClippingRankSum

4-190873489-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190873489
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 190873489
    reference: chr 4
allele count: 1
allele frequency: 8.516291665956975e-6
allele num: 117422
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000436535
  ensembl transcript: ENST00000533157
  gene symbol: FRG1
  hgvsc: ENST00000533157.1:c.*302+47A>G
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl transcript: ENST00000514482
  gene symbol: FRG1
  hgvsc: ENST00000514482.1:n.245+47A>G
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435943
  ensembl transcript: ENST00000531991
  gene symbol: FRG1
  hgvsc: ENST00000531991.2:c.70+47A>G
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000226798
  ensembl transcript: ENST00000226798
  gene symbol: FRG1
  hgvsc: ENST00000226798.4:c.259+47A>G
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435067
  ensembl transcript: ENST00000524583
  gene symbol: FRG1
  hgvsc: ENST00000524583.1:c.48+47A>G
  variant of: http://identifiers.org/hgnc/3954
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 10891
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4768
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 651
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5874
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1868
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1009
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1188
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 437
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5809
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5751
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1267
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 836
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 580
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  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1311
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3671
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
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  variant carriers: 0
genotype depth: GenotypeDepth
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genotype depth: GenotypeDepth
  all individuals: 5668
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2723
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1543
  bin: 7.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 8037
  bin: 6.25e1
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genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 486
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  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
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  bin: 8.75e1
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genotype quality: GenotypeQuality
  all individuals: 2413
  bin: 7.75e1
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genotype quality: GenotypeQuality
  all individuals: 392
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genotype quality: GenotypeQuality
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  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
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genotype quality: GenotypeQuality
  all individuals: 496
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 159
  bin: 1.25e1
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genotype quality: GenotypeQuality
  all individuals: 34233
  bin: 9.75e1
  variant carriers: 1
num of homozygotes: 0
population: South Asian
population: Other
population: East Asian
population: European (Non-Finnish)
population: Latino
population: African
population: European (Finnish)
reference allele: A
site quality: FS
site quality: VQSLOD
site quality: MQRankSum
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: QD
site quality: InbreedingCoeff
site quality: MQ
site quality: DP
site quality: ClippingRankSum

4-190874174-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190874174
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 190874174
    reference: chr 4
allele count: 1
allele frequency: 1.297858533419857e-5
allele num: 77050
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435067
  ensembl transcript: ENST00000524583
  gene symbol: FRG1
  hgvsc: ENST00000524583.1:c.48+732T>C
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000226798
  ensembl transcript: ENST00000226798
  gene symbol: FRG1
  hgvsc: ENST00000226798.4:c.260-49T>C
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl transcript: ENST00000514482
  gene symbol: FRG1
  hgvsc: ENST00000514482.1:n.246-49T>C
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435943
  ensembl transcript: ENST00000531991
  gene symbol: FRG1
  hgvsc: ENST00000531991.2:c.71-49T>C
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000436535
  ensembl transcript: ENST00000533157
  gene symbol: FRG1
  hgvsc: ENST00000533157.1:c.*303-49T>C
  variant of: http://identifiers.org/hgnc/3954
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 637
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6092
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 941
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1262
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1323
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1111
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1232
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4023
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15025
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15322
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1171
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8315
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1675
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 667
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1342
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4097
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2499
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6731
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2221
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 825
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2853
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 651
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5846
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 537
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8408
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7410
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4014
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4077
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: African
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Latino
population: Other
reference allele: T
site quality: QD
site quality: DP
site quality: MQ
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: FS

http://identifiers.org/exac.variant/4-190874175-A-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190874175
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 190874175
    reference: chr 4
allele count: 0
allele frequency: 0.0e0
allele num: 77102
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435943
  ensembl transcript: ENST00000531991
  gene symbol: FRG1
  hgvsc: ENST00000531991.2:c.71-48A>C
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435067
  ensembl transcript: ENST00000524583
  gene symbol: FRG1
  hgvsc: ENST00000524583.1:c.48+733A>C
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000436535
  ensembl transcript: ENST00000533157
  gene symbol: FRG1
  hgvsc: ENST00000533157.1:c.*303-48A>C
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000226798
  ensembl transcript: ENST00000226798
  gene symbol: FRG1
  hgvsc: ENST00000226798.4:c.260-48A>C
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl transcript: ENST00000514482
  gene symbol: FRG1
  hgvsc: ENST00000514482.1:n.246-48A>C
  variant of: http://identifiers.org/hgnc/3954
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15309
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4422
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 942
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1264
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7942
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15000
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1345
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6072
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1174
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1675
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1113
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 653
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 352
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 588
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8689
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3177
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2511
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3821
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2217
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3583
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 675
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6720
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 834
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4166
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 435
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2307
  bin: 5.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: Latino
population: South Asian
reference allele: A
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ
site quality: DP
site quality: VQSLOD
site quality: QD

4-190874175-ATTTATAGCAAATGTCAAATTTATT-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190874175
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 190874151
    reference: chr 4
allele count: 58
allele frequency: 7.522502658815595e-4
allele num: 77102
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000226798
  ensembl transcript: ENST00000226798
  gene symbol: FRG1
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435067
  ensembl transcript: ENST00000524583
  gene symbol: FRG1
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl transcript: ENST00000514482
  gene symbol: FRG1
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000436535
  ensembl transcript: ENST00000533157
  gene symbol: FRG1
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435943
  ensembl transcript: ENST00000531991
  gene symbol: FRG1
  variant of: http://identifiers.org/hgnc/3954
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.50to99.90
genotype depth: GenotypeDepth
  all individuals: 4422
  bin: 2.25e1
  variant carriers: 23
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7942
  bin: 1.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 1345
  bin: 2.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 1229
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 455
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 328
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 171
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15309
  bin: 1.25e1
  variant carriers: 29
genotype depth: GenotypeDepth
  all individuals: 6072
  bin: 2.5e0
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 103
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 942
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1264
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1675
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1174
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 153
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 183
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1113
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 251
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 15000
  bin: 7.5e0
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 4166
  bin: 7.5e0
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 8689
  bin: 2.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 5849
  bin: 3.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 3821
  bin: 1.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 352
  bin: 5.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 3177
  bin: 6.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 3583
  bin: 2.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 2307
  bin: 5.25e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 834
  bin: 7.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 3983
  bin: 4.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 1350
  bin: 6.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 2217
  bin: 1.25e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 7405
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 588
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 435
  bin: 2.5e0
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 6720
  bin: 3.25e1
  variant carriers: 3
num of homozygotes: 0
population: European (Finnish)
population: Latino
population: Other
population: African
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: ATTTATAGCAAATGTCAAATTTATT
site quality: ReadPosRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: QD
site quality: DP
site quality: MQ

4-190874178-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190874178
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 190874178
    reference: chr 4
allele count: 578
allele frequency: 1.304799313738769e-2
allele num: 44298
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435067
  ensembl transcript: ENST00000524583
  gene symbol: FRG1
  hgvsc: ENST00000524583.1:c.48+736T>C
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl transcript: ENST00000514482
  gene symbol: FRG1
  hgvsc: ENST00000514482.1:n.246-45T>C
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435943
  ensembl transcript: ENST00000531991
  gene symbol: FRG1
  hgvsc: ENST00000531991.2:c.71-45T>C
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000436535
  ensembl transcript: ENST00000533157
  gene symbol: FRG1
  hgvsc: ENST00000533157.1:c.*303-45T>C
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000226798
  ensembl transcript: ENST00000226798
  gene symbol: FRG1
  hgvsc: ENST00000226798.4:c.260-45T>C
  variant of: http://identifiers.org/hgnc/3954
canonical: true
consequence: intron
filter: PASS
genotype depth: GenotypeDepth
  all individuals: 500
  bin: 6.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1255
  bin: 3.25e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 1146
  bin: 3.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 292
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9010
  bin: 1.75e1
  variant carriers: 203
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14760
  bin: 1.25e1
  variant carriers: 287
genotype depth: GenotypeDepth
  all individuals: 13992
  bin: 7.5e0
  variant carriers: 181
genotype depth: GenotypeDepth
  all individuals: 5572
  bin: 2.5e0
  variant carriers: 14
genotype depth: GenotypeDepth
  all individuals: 1282
  bin: 4.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 4511
  bin: 2.25e1
  variant carriers: 87
genotype depth: GenotypeDepth
  all individuals: 347
  bin: 6.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 105
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1152
  bin: 4.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 7.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 719
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1002
  bin: 5.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 1615
  bin: 2.75e1
  variant carriers: 27
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1680
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4355
  bin: 9.75e1
  variant carriers: 66
genotype quality: GenotypeQuality
  all individuals: 5343
  bin: 7.5e0
  variant carriers: 21
genotype quality: GenotypeQuality
  all individuals: 1446
  bin: 4.25e1
  variant carriers: 67
genotype quality: GenotypeQuality
  all individuals: 1851
  bin: 4.75e1
  variant carriers: 46
genotype quality: GenotypeQuality
  all individuals: 6430
  bin: 2.25e1
  variant carriers: 41
genotype quality: GenotypeQuality
  all individuals: 986
  bin: 5.25e1
  variant carriers: 55
genotype quality: GenotypeQuality
  all individuals: 407
  bin: 7.75e1
  variant carriers: 45
genotype quality: GenotypeQuality
  all individuals: 348
  bin: 8.25e1
  variant carriers: 40
genotype quality: GenotypeQuality
  all individuals: 3214
  bin: 1.75e1
  variant carriers: 36
genotype quality: GenotypeQuality
  all individuals: 290
  bin: 8.75e1
  variant carriers: 16
genotype quality: GenotypeQuality
  all individuals: 2673
  bin: 2.75e1
  variant carriers: 46
genotype quality: GenotypeQuality
  all individuals: 19247
  bin: 2.5e0
  variant carriers: 20
genotype quality: GenotypeQuality
  all individuals: 3000
  bin: 3.75e1
  variant carriers: 35
genotype quality: GenotypeQuality
  all individuals: 397
  bin: 5.75e1
  variant carriers: 49
genotype quality: GenotypeQuality
  all individuals: 612
  bin: 6.75e1
  variant carriers: 64
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
population: European (Finnish)
reference allele: T
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: MQ
site quality: MQRankSum
site quality: QD

http://identifiers.org/exac.variant/4-190874183-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190874183
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 190874183
    reference: chr 4
allele count: 23992
allele frequency: 4.35458109481632e-1
allele num: 55096
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435943
  ensembl transcript: ENST00000531991
  gene symbol: FRG1
  hgvsc: ENST00000531991.2:c.71-40C>A
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435067
  ensembl transcript: ENST00000524583
  gene symbol: FRG1
  hgvsc: ENST00000524583.1:c.48+741C>A
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000226798
  ensembl transcript: ENST00000226798
  gene symbol: FRG1
  hgvsc: ENST00000226798.4:c.260-40C>A
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl transcript: ENST00000514482
  gene symbol: FRG1
  hgvsc: ENST00000514482.1:n.246-40C>A
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000436535
  ensembl transcript: ENST00000533157
  gene symbol: FRG1
  hgvsc: ENST00000533157.1:c.*303-40C>A
  variant of: http://identifiers.org/hgnc/3954
canonical: true
consequence: intron
filter: InbreedingCoeff_Filter
genotype depth: GenotypeDepth
  all individuals: 4821
  bin: 2.5e0
  variant carriers: 143
genotype depth: GenotypeDepth
  all individuals: 789
  bin: 5.75e1
  variant carriers: 720
genotype depth: GenotypeDepth
  all individuals: 14875
  bin: 1.25e1
  variant carriers: 6462
genotype depth: GenotypeDepth
  all individuals: 984
  bin: 5.25e1
  variant carriers: 899
genotype depth: GenotypeDepth
  all individuals: 1140
  bin: 4.25e1
  variant carriers: 1028
genotype depth: GenotypeDepth
  all individuals: 228
  bin: 7.75e1
  variant carriers: 183
genotype depth: GenotypeDepth
  all individuals: 12610
  bin: 7.5e0
  variant carriers: 2638
genotype depth: GenotypeDepth
  all individuals: 421
  bin: 6.75e1
  variant carriers: 366
genotype depth: GenotypeDepth
  all individuals: 1145
  bin: 3.75e1
  variant carriers: 978
genotype depth: GenotypeDepth
  all individuals: 1856
  bin: 9.75e1
  variant carriers: 1185
genotype depth: GenotypeDepth
  all individuals: 1902
  bin: 2.75e1
  variant carriers: 1304
genotype depth: GenotypeDepth
  all individuals: 1129
  bin: 4.75e1
  variant carriers: 1015
genotype depth: GenotypeDepth
  all individuals: 4683
  bin: 2.25e1
  variant carriers: 2873
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 6.25e1
  variant carriers: 479
genotype depth: GenotypeDepth
  all individuals: 323
  bin: 7.25e1
  variant carriers: 253
genotype depth: GenotypeDepth
  all individuals: 10321
  bin: 1.75e1
  variant carriers: 5686
genotype depth: GenotypeDepth
  all individuals: 132
  bin: 9.25e1
  variant carriers: 83
genotype depth: GenotypeDepth
  all individuals: 1122
  bin: 3.25e1
  variant carriers: 877
genotype depth: GenotypeDepth
  all individuals: 158
  bin: 8.75e1
  variant carriers: 94
genotype depth: GenotypeDepth
  all individuals: 193
  bin: 8.25e1
  variant carriers: 123
genotype quality: GenotypeQuality
  all individuals: 1046
  bin: 2.75e1
  variant carriers: 360
genotype quality: GenotypeQuality
  all individuals: 754
  bin: 4.25e1
  variant carriers: 576
genotype quality: GenotypeQuality
  all individuals: 1198
  bin: 3.25e1
  variant carriers: 444
genotype quality: GenotypeQuality
  all individuals: 807
  bin: 7.25e1
  variant carriers: 748
genotype quality: GenotypeQuality
  all individuals: 739
  bin: 5.75e1
  variant carriers: 678
genotype quality: GenotypeQuality
  all individuals: 2836
  bin: 2.25e1
  variant carriers: 271
genotype quality: GenotypeQuality
  all individuals: 19702
  bin: 2.5e0
  variant carriers: 141
genotype quality: GenotypeQuality
  all individuals: 736
  bin: 4.75e1
  variant carriers: 568
genotype quality: GenotypeQuality
  all individuals: 849
  bin: 7.75e1
  variant carriers: 797
genotype quality: GenotypeQuality
  all individuals: 812
  bin: 8.25e1
  variant carriers: 764
genotype quality: GenotypeQuality
  all individuals: 824
  bin: 5.25e1
  variant carriers: 719
genotype quality: GenotypeQuality
  all individuals: 1736
  bin: 1.25e1
  variant carriers: 228
genotype quality: GenotypeQuality
  all individuals: 3704
  bin: 7.5e0
  variant carriers: 161
genotype quality: GenotypeQuality
  all individuals: 933
  bin: 6.75e1
  variant carriers: 869
genotype quality: GenotypeQuality
  all individuals: 854
  bin: 3.75e1
  variant carriers: 459
num of homozygotes: 0
population: East Asian
population: South Asian
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: VQSLOD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD
site quality: DP

4-190874187-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190874187
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 190874187
    reference: chr 4
allele count: 2
allele frequency: 2.408883964059451e-5
allele num: 83026
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl transcript: ENST00000514482
  gene symbol: FRG1
  hgvsc: ENST00000514482.1:n.246-36T>C
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000226798
  ensembl transcript: ENST00000226798
  gene symbol: FRG1
  hgvsc: ENST00000226798.4:c.260-36T>C
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000436535
  ensembl transcript: ENST00000533157
  gene symbol: FRG1
  hgvsc: ENST00000533157.1:c.*303-36T>C
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435943
  ensembl transcript: ENST00000531991
  gene symbol: FRG1
  hgvsc: ENST00000531991.2:c.71-36T>C
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435067
  ensembl transcript: ENST00000524583
  gene symbol: FRG1
  hgvsc: ENST00000524583.1:c.48+745T>C
  variant of: http://identifiers.org/hgnc/3954
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 5067
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1151
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1134
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 989
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14841
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12750
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1859
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1892
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1134
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9545
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5179
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3867
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3950
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 341
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 495
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2293
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2189
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9918
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8382
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1450
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2725
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3603
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3592
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6466
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 494
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1832
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: Latino
population: South Asian
population: African
reference allele: T
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: VQSLOD

4-190874188-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190874188
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 190874188
    reference: chr 4
allele count: 2
allele frequency: 2.41551728302616e-5
allele num: 82798
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl transcript: ENST00000514482
  gene symbol: FRG1
  hgvsc: ENST00000514482.1:n.246-35G>T
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435067
  ensembl transcript: ENST00000524583
  gene symbol: FRG1
  hgvsc: ENST00000524583.1:c.48+746G>T
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435943
  ensembl transcript: ENST00000531991
  gene symbol: FRG1
  hgvsc: ENST00000531991.2:c.71-35G>T
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000436535
  ensembl transcript: ENST00000533157
  gene symbol: FRG1
  hgvsc: ENST00000533157.1:c.*303-35G>T
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000226798
  ensembl transcript: ENST00000226798
  gene symbol: FRG1
  hgvsc: ENST00000226798.4:c.260-35G>T
  variant of: http://identifiers.org/hgnc/3954
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1134
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5043
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5346
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9386
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12750
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1134
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 989
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1893
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14850
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1859
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1157
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 839
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2626
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8381
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 334
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10039
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3799
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 434
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1826
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3859
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3566
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6445
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2073
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1442
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 496
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2286
  bin: 4.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: African
population: South Asian
population: Latino
population: Other
population: East Asian
reference allele: G
site quality: MQ
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQRankSum
site quality: DP
site quality: FS
site quality: QD
site quality: BaseQRankSum

4-190874189-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190874189
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 190874189
    reference: chr 4
allele count: 11
allele frequency: 1.331880372926505e-4
allele num: 82590
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435943
  ensembl transcript: ENST00000531991
  gene symbol: FRG1
  hgvsc: ENST00000531991.2:c.71-34T>C
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl transcript: ENST00000514482
  gene symbol: FRG1
  hgvsc: ENST00000514482.1:n.246-34T>C
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435067
  ensembl transcript: ENST00000524583
  gene symbol: FRG1
  hgvsc: ENST00000524583.1:c.48+747T>C
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000436535
  ensembl transcript: ENST00000533157
  gene symbol: FRG1
  hgvsc: ENST00000533157.1:c.*303-34T>C
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000226798
  ensembl transcript: ENST00000226798
  gene symbol: FRG1
  hgvsc: ENST00000226798.4:c.260-34T>C
  variant of: http://identifiers.org/hgnc/3954
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1129
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 989
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 238
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5005
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9277
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1157
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1909
  bin: 2.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1134
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12750
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1134
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 152
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5456
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14859
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 545
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1859
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 778
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2285
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9962
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1880
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6397
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2689
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3851
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 8380
  bin: 9.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 525
  bin: 2.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2036
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 499
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3565
  bin: 4.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 3700
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3982
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 495
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1421
  bin: 6.75e1
  variant carriers: 2
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
reference allele: T
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: DP
site quality: MQ
site quality: MQRankSum

http://identifiers.org/exac.variant/4-190874190-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190874190
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 190874190
    reference: chr 4
allele count: 2
allele frequency: 2.491342584518797e-5
allele num: 80278
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000436535
  ensembl transcript: ENST00000533157
  gene symbol: FRG1
  hgvsc: ENST00000533157.1:c.*303-33C>A
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435943
  ensembl transcript: ENST00000531991
  gene symbol: FRG1
  hgvsc: ENST00000531991.2:c.71-33C>A
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000226798
  ensembl transcript: ENST00000226798
  gene symbol: FRG1
  hgvsc: ENST00000226798.4:c.260-33C>A
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435067
  ensembl transcript: ENST00000524583
  gene symbol: FRG1
  hgvsc: ENST00000524583.1:c.48+748C>A
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl transcript: ENST00000514482
  gene symbol: FRG1
  hgvsc: ENST00000514482.1:n.246-33C>A
  variant of: http://identifiers.org/hgnc/3954
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 14859
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1908
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4943
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5710
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12713
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1195
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 991
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9093
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 769
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1126
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1861
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1135
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 792
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1726
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4017
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 343
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3345
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1902
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6231
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8201
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 584
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2453
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 344
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9969
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1785
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2191
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3840
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: European (Finnish)
population: Other
population: East Asian
population: European (Non-Finnish)
population: South Asian
reference allele: C
site quality: MQRankSum
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: DP
site quality: ClippingRankSum
site quality: MQ
site quality: ReadPosRankSum

http://identifiers.org/exac.variant/4-190874190-C-CAA
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190874190
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 190874192
    reference: chr 4
allele count: 410
allele frequency: 5.107252298263534e-3
allele num: 80278
alternate allele: CAA
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000436535
  ensembl transcript: ENST00000533157
  gene symbol: FRG1
  hgvsc: ENST00000533157.1:c.*303-31_*303-30dupAA
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl transcript: ENST00000514482
  gene symbol: FRG1
  hgvsc: ENST00000514482.1:n.246-31_246-30dupAA
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435943
  ensembl transcript: ENST00000531991
  gene symbol: FRG1
  hgvsc: ENST00000531991.2:c.71-31_71-30dupAA
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435067
  ensembl transcript: ENST00000524583
  gene symbol: FRG1
  hgvsc: ENST00000524583.1:c.48+750_48+751dupAA
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000226798
  ensembl transcript: ENST00000226798
  gene symbol: FRG1
  hgvsc: ENST00000226798.4:c.260-31_260-30dupAA
  variant of: http://identifiers.org/hgnc/3954
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 1126
  bin: 3.75e1
  variant carriers: 49
genotype depth: GenotypeDepth
  all individuals: 5710
  bin: 2.25e1
  variant carriers: 68
genotype depth: GenotypeDepth
  all individuals: 12713
  bin: 7.5e0
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 991
  bin: 5.25e1
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 6.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 1135
  bin: 4.75e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 14859
  bin: 1.25e1
  variant carriers: 49
genotype depth: GenotypeDepth
  all individuals: 4943
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9093
  bin: 1.75e1
  variant carriers: 58
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1195
  bin: 3.25e1
  variant carriers: 35
genotype depth: GenotypeDepth
  all individuals: 769
  bin: 5.75e1
  variant carriers: 15
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 8.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1861
  bin: 9.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 4.25e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 1908
  bin: 2.75e1
  variant carriers: 44
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 6.25e1
  variant carriers: 16
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 7.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 7.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 9969
  bin: 2.25e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 1375
  bin: 6.75e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 498
  bin: 9.25e1
  variant carriers: 28
genotype quality: GenotypeQuality
  all individuals: 6231
  bin: 3.25e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 5240
  bin: 3.75e1
  variant carriers: 16
genotype quality: GenotypeQuality
  all individuals: 4017
  bin: 7.5e0
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 1902
  bin: 1.25e1
  variant carriers: 17
genotype quality: GenotypeQuality
  all individuals: 3840
  bin: 2.75e1
  variant carriers: 25
genotype quality: GenotypeQuality
  all individuals: 2453
  bin: 1.75e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 4047
  bin: 6.25e1
  variant carriers: 25
genotype quality: GenotypeQuality
  all individuals: 1785
  bin: 5.25e1
  variant carriers: 20
genotype quality: GenotypeQuality
  all individuals: 2191
  bin: 4.25e1
  variant carriers: 11
genotype quality: GenotypeQuality
  all individuals: 3345
  bin: 4.75e1
  variant carriers: 25
genotype quality: GenotypeQuality
  all individuals: 584
  bin: 7.25e1
  variant carriers: 22
genotype quality: GenotypeQuality
  all individuals: 8201
  bin: 9.75e1
  variant carriers: 150
num of homozygotes: 0
population: European (Finnish)
population: Other
population: African
population: South Asian
population: Latino
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQ

4-190874190-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190874190
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 190874190
    reference: chr 4
allele count: 2
allele frequency: 2.491342584518797e-5
allele num: 80278
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000436535
  ensembl transcript: ENST00000533157
  gene symbol: FRG1
  hgvsc: ENST00000533157.1:c.*303-33C>G
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000226798
  ensembl transcript: ENST00000226798
  gene symbol: FRG1
  hgvsc: ENST00000226798.4:c.260-33C>G
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435943
  ensembl transcript: ENST00000531991
  gene symbol: FRG1
  hgvsc: ENST00000531991.2:c.71-33C>G
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl transcript: ENST00000514482
  gene symbol: FRG1
  hgvsc: ENST00000514482.1:n.246-33C>G
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435067
  ensembl transcript: ENST00000524583
  gene symbol: FRG1
  hgvsc: ENST00000524583.1:c.48+748C>G
  variant of: http://identifiers.org/hgnc/3954
canonical: true
consequence: intron
filter: VQSRTrancheINDEL99.00to99.50
genotype depth: GenotypeDepth
  all individuals: 1908
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1135
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 769
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 991
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 552
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5710
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14859
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1126
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9093
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 141
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12713
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4943
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1195
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 427
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 198
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1130
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 310
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 150
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1861
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 792
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4017
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6231
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 9969
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1785
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1902
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2453
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 343
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1726
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 498
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 584
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3345
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2191
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3840
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 344
  bin: 8.75e1
  variant carriers: 0
num of homozygotes: 0
population: South Asian
population: African
population: European (Non-Finnish)
population: East Asian
population: Latino
population: European (Finnish)
population: Other
reference allele: C
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: MQ
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: VQSLOD
site quality: DP
site quality: MQRankSum

4-190874191-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190874191
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 190874191
    reference: chr 4
allele count: 2
allele frequency: 2.497814412389159e-5
allele num: 80070
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435067
  ensembl transcript: ENST00000524583
  gene symbol: FRG1
  hgvsc: ENST00000524583.1:c.48+749A>G
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000436535
  ensembl transcript: ENST00000533157
  gene symbol: FRG1
  hgvsc: ENST00000533157.1:c.*303-32A>G
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl transcript: ENST00000514482
  gene symbol: FRG1
  hgvsc: ENST00000514482.1:n.246-32A>G
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000226798
  ensembl transcript: ENST00000226798
  gene symbol: FRG1
  hgvsc: ENST00000226798.4:c.260-32A>G
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435943
  ensembl transcript: ENST00000531991
  gene symbol: FRG1
  hgvsc: ENST00000531991.2:c.71-32A>G
  variant of: http://identifiers.org/hgnc/3954
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1863
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 197
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14822
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1187
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 986
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 555
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4917
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12730
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1132
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8853
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 243
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1136
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1132
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 139
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1911
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5978
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1851
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3286
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2175
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4261
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1395
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6247
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2286
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 323
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 560
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4052
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1629
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3842
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 569
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8087
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1888
  bin: 2.5e0
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: European (Non-Finnish)
population: East Asian
population: Other
population: Latino
population: African
population: South Asian
reference allele: A
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: QD
site quality: VQSLOD

4-190874193-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190874193
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 190874193
    reference: chr 4
allele count: 1
allele frequency: 1.200422548737155e-5
allele num: 83304
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl transcript: ENST00000514482
  gene symbol: FRG1
  hgvsc: ENST00000514482.1:n.246-30A>G
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435943
  ensembl transcript: ENST00000531991
  gene symbol: FRG1
  hgvsc: ENST00000531991.2:c.71-30A>G
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000436535
  ensembl transcript: ENST00000533157
  gene symbol: FRG1
  hgvsc: ENST00000533157.1:c.*303-30A>G
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000226798
  ensembl transcript: ENST00000226798
  gene symbol: FRG1
  hgvsc: ENST00000226798.4:c.260-30A>G
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435067
  ensembl transcript: ENST00000524583
  gene symbol: FRG1
  hgvsc: ENST00000524583.1:c.48+751A>G
  variant of: http://identifiers.org/hgnc/3954
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 12736
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1138
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1942
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6430
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1124
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14850
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1198
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1128
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8378
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4860
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1862
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 989
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2212
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3857
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6404
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8314
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5429
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 349
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10574
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3325
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 337
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3886
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1570
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 518
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1519
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 629
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1678
  bin: 1.25e1
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: Other
population: South Asian
population: African
population: European (Finnish)
population: Latino
reference allele: A
site quality: FS
site quality: MQ
site quality: MQRankSum
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: DP

4-190874193-A-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190874193
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 190874193
    reference: chr 4
allele count: 3
allele frequency: 3.601267646211466e-5
allele num: 83304
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000226798
  ensembl transcript: ENST00000226798
  gene symbol: FRG1
  hgvsc: ENST00000226798.4:c.260-30A>T
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435943
  ensembl transcript: ENST00000531991
  gene symbol: FRG1
  hgvsc: ENST00000531991.2:c.71-30A>T
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435067
  ensembl transcript: ENST00000524583
  gene symbol: FRG1
  hgvsc: ENST00000524583.1:c.48+751A>T
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000436535
  ensembl transcript: ENST00000533157
  gene symbol: FRG1
  hgvsc: ENST00000533157.1:c.*303-30A>T
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl transcript: ENST00000514482
  gene symbol: FRG1
  hgvsc: ENST00000514482.1:n.246-30A>T
  variant of: http://identifiers.org/hgnc/3954
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 554
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 989
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1942
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4860
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1198
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 771
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6430
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 8378
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1124
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 244
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1862
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 428
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 305
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12736
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14850
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1128
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1138
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 155
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 337
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 873
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6404
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5429
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1519
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4751
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3325
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 10574
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1570
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 631
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2212
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1678
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3886
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3857
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2177
  bin: 1.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: FS
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: ReadPosRankSum
site quality: QD

4-190874194-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190874194
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 190874194
    reference: chr 4
allele count: 69
allele frequency: 8.318264014466546e-4
allele num: 82950
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435943
  ensembl transcript: ENST00000531991
  gene symbol: FRG1
  hgvsc: ENST00000531991.2:c.71-29T>C
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000436535
  ensembl transcript: ENST00000533157
  gene symbol: FRG1
  hgvsc: ENST00000533157.1:c.*303-29T>C
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000226798
  ensembl transcript: ENST00000226798
  gene symbol: FRG1
  hgvsc: ENST00000226798.4:c.260-29T>C
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435067
  ensembl transcript: ENST00000524583
  gene symbol: FRG1
  hgvsc: ENST00000524583.1:c.48+752T>C
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl transcript: ENST00000514482
  gene symbol: FRG1
  hgvsc: ENST00000514482.1:n.246-29T>C
  variant of: http://identifiers.org/hgnc/3954
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 772
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 12744
  bin: 7.5e0
  variant carriers: 17
genotype depth: GenotypeDepth
  all individuals: 1200
  bin: 3.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1125
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8140
  bin: 1.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 989
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 6.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 7.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4814
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14852
  bin: 1.25e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1862
  bin: 9.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 1124
  bin: 3.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1142
  bin: 4.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 8.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 6682
  bin: 2.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 1964
  bin: 2.75e1
  variant carriers: 6
genotype quality: GenotypeQuality
  all individuals: 3851
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 10720
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3884
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 626
  bin: 7.25e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 258
  bin: 5.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 5406
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 631
  bin: 8.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 1398
  bin: 5.25e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 5162
  bin: 6.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 346
  bin: 8.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 581
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3166
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2172
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6367
  bin: 3.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 874
  bin: 7.75e1
  variant carriers: 5
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: African
population: European (Non-Finnish)
population: Other
population: East Asian
reference allele: T
site quality: MQ
site quality: VQSLOD
site quality: ClippingRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP

4-190874195-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190874195
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 190874195
    reference: chr 4
allele count: 5
allele frequency: 6.019599817004165e-5
allele num: 83062
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000436535
  ensembl transcript: ENST00000533157
  gene symbol: FRG1
  hgvsc: ENST00000533157.1:c.*303-28T>G
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl transcript: ENST00000514482
  gene symbol: FRG1
  hgvsc: ENST00000514482.1:n.246-28T>G
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000226798
  ensembl transcript: ENST00000226798
  gene symbol: FRG1
  hgvsc: ENST00000226798.4:c.260-28T>G
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435067
  ensembl transcript: ENST00000524583
  gene symbol: FRG1
  hgvsc: ENST00000524583.1:c.48+753T>G
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435943
  ensembl transcript: ENST00000531991
  gene symbol: FRG1
  hgvsc: ENST00000531991.2:c.71-28T>G
  variant of: http://identifiers.org/hgnc/3954
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1139
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4764
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 195
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6940
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 303
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1978
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1862
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1203
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12763
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1122
  bin: 3.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14845
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 992
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7884
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1125
  bin: 4.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1623
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5409
  bin: 3.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 630
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1879
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 873
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 623
  bin: 7.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6382
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3889
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10870
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1301
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1537
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 244
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2164
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 517
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3835
  bin: 7.5e0
  variant carriers: 1
num of homozygotes: 0
population: Latino
population: European (Non-Finnish)
population: European (Finnish)
population: East Asian
population: South Asian
population: African
population: Other
reference allele: T
site quality: MQ
site quality: DP
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: BaseQRankSum

4-190874196-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190874196
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 190874196
    reference: chr 4
allele count: 1
allele frequency: 1.196630289105878e-5
allele num: 83568
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl transcript: ENST00000514482
  gene symbol: FRG1
  hgvsc: ENST00000514482.1:n.246-27T>G
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000226798
  ensembl transcript: ENST00000226798
  gene symbol: FRG1
  hgvsc: ENST00000226798.4:c.260-27T>G
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000436535
  ensembl transcript: ENST00000533157
  gene symbol: FRG1
  hgvsc: ENST00000533157.1:c.*303-27T>G
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435943
  ensembl transcript: ENST00000531991
  gene symbol: FRG1
  hgvsc: ENST00000531991.2:c.71-27T>G
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435067
  ensembl transcript: ENST00000524583
  gene symbol: FRG1
  hgvsc: ENST00000524583.1:c.48+754T>G
  variant of: http://identifiers.org/hgnc/3954
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7675
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 993
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7159
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14833
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1120
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1211
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4699
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1988
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12776
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1137
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1862
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3722
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 353
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3036
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1576
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8314
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5426
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6426
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 635
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2153
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 394
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 326
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 629
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 883
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10861
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3915
  bin: 2.75e1
  variant carriers: 0
num of homozygotes: 0
population: Latino
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: African
population: East Asian
reference allele: T
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: QD
site quality: FS
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: DP

4-190874197-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190874197
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 190874197
    reference: chr 4
allele count: 5
allele frequency: 6.005573171903526e-5
allele num: 83256
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl transcript: ENST00000514482
  gene symbol: FRG1
  hgvsc: ENST00000514482.1:n.246-26A>G
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435943
  ensembl transcript: ENST00000531991
  gene symbol: FRG1
  hgvsc: ENST00000531991.2:c.71-26A>G
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435067
  ensembl transcript: ENST00000524583
  gene symbol: FRG1
  hgvsc: ENST00000524583.1:c.48+755A>G
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000226798
  ensembl transcript: ENST00000226798
  gene symbol: FRG1
  hgvsc: ENST00000226798.4:c.260-26A>G
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000436535
  ensembl transcript: ENST00000533157
  gene symbol: FRG1
  hgvsc: ENST00000533157.1:c.*303-26A>G
  variant of: http://identifiers.org/hgnc/3954
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2007
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12796
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14824
  bin: 1.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 1120
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1136
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 551
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7335
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 994
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7518
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4652
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1220
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1127
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 774
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1862
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1556
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 875
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 347
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8305
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3872
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1555
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3743
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2855
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 461
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5852
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 521
  bin: 9.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6412
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1804
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 11075
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 622
  bin: 7.25e1
  variant carriers: 0
num of homozygotes: 0
population: Other
population: South Asian
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
reference allele: A
site quality: ReadPosRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: QD
site quality: ClippingRankSum
site quality: DP
site quality: FS
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: MQRankSum

4-190874198-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190874198
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 190874198
    reference: chr 4
allele count: 4
allele frequency: 4.785146904009953e-5
allele num: 83592
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435067
  ensembl transcript: ENST00000524583
  gene symbol: FRG1
  hgvsc: ENST00000524583.1:c.48+756T>A
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000226798
  ensembl transcript: ENST00000226798
  gene symbol: FRG1
  hgvsc: ENST00000226798.4:c.260-25T>A
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000436535
  ensembl transcript: ENST00000533157
  gene symbol: FRG1
  hgvsc: ENST00000533157.1:c.*303-25T>A
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl transcript: ENST00000514482
  gene symbol: FRG1
  hgvsc: ENST00000514482.1:n.246-25T>A
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435943
  ensembl transcript: ENST00000531991
  gene symbol: FRG1
  hgvsc: ENST00000531991.2:c.71-25T>A
  variant of: http://identifiers.org/hgnc/3954
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 1222
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7199
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 775
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1120
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7633
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 14814
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4590
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 140
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2057
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 550
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 429
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12818
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 994
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1862
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 302
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 156
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1128
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1136
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 630
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 735
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3662
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2824
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1507
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1362
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6480
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3944
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 347
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 527
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1574
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2132
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  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5118
  bin: 6.25e1
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genotype quality: GenotypeQuality
  all individuals: 347
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 888
  bin: 7.75e1
  variant carriers: 1
num of homozygotes: 0
population: East Asian
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: African
population: Latino
population: South Asian
reference allele: T
site quality: BaseQRankSum
site quality: MQ
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: ClippingRankSum
site quality: QD
site quality: MQRankSum
site quality: FS
site quality: DP
site quality: InbreedingCoeff

4-190874199-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190874199
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 190874199
    reference: chr 4
allele count: 23475
allele frequency: 3.568930917051812e-1
allele num: 65776
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435067
  ensembl transcript: ENST00000524583
  gene symbol: FRG1
  hgvsc: ENST00000524583.1:c.48+757T>A
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000226798
  ensembl transcript: ENST00000226798
  gene symbol: FRG1
  hgvsc: ENST00000226798.4:c.260-24T>A
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl transcript: ENST00000514482
  gene symbol: FRG1
  hgvsc: ENST00000514482.1:n.246-24T>A
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000436535
  ensembl transcript: ENST00000533157
  gene symbol: FRG1
  hgvsc: ENST00000533157.1:c.*303-24T>A
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435943
  ensembl transcript: ENST00000531991
  gene symbol: FRG1
  hgvsc: ENST00000531991.2:c.71-24T>A
  variant of: http://identifiers.org/hgnc/3954
canonical: true
consequence: intron
filter: InbreedingCoeff_Filter
genotype depth: GenotypeDepth
  all individuals: 6487
  bin: 2.25e1
  variant carriers: 3883
genotype depth: GenotypeDepth
  all individuals: 1021
  bin: 4.75e1
  variant carriers: 772
genotype depth: GenotypeDepth
  all individuals: 1021
  bin: 4.25e1
  variant carriers: 720
genotype depth: GenotypeDepth
  all individuals: 10196
  bin: 7.5e0
  variant carriers: 1476
genotype depth: GenotypeDepth
  all individuals: 1484
  bin: 3.25e1
  variant carriers: 1032
genotype depth: GenotypeDepth
  all individuals: 3371
  bin: 2.5e0
  variant carriers: 100
genotype depth: GenotypeDepth
  all individuals: 2199
  bin: 9.75e1
  variant carriers: 2049
genotype depth: GenotypeDepth
  all individuals: 13936
  bin: 1.25e1
  variant carriers: 4086
genotype depth: GenotypeDepth
  all individuals: 586
  bin: 6.75e1
  variant carriers: 472
genotype depth: GenotypeDepth
  all individuals: 943
  bin: 5.75e1
  variant carriers: 729
genotype depth: GenotypeDepth
  all individuals: 3058
  bin: 2.75e1
  variant carriers: 2113
genotype depth: GenotypeDepth
  all individuals: 10833
  bin: 1.75e1
  variant carriers: 5093
genotype depth: GenotypeDepth
  all individuals: 978
  bin: 5.25e1
  variant carriers: 730
genotype depth: GenotypeDepth
  all individuals: 162
  bin: 9.25e1
  variant carriers: 138
genotype depth: GenotypeDepth
  all individuals: 317
  bin: 7.75e1
  variant carriers: 264
genotype depth: GenotypeDepth
  all individuals: 181
  bin: 8.75e1
  variant carriers: 153
genotype depth: GenotypeDepth
  all individuals: 263
  bin: 8.25e1
  variant carriers: 224
genotype depth: GenotypeDepth
  all individuals: 434
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  variant carriers: 350
genotype depth: GenotypeDepth
  all individuals: 714
  bin: 6.25e1
  variant carriers: 573
genotype depth: GenotypeDepth
  all individuals: 1006
  bin: 3.75e1
  variant carriers: 680
genotype quality: GenotypeQuality
  all individuals: 981
  bin: 6.75e1
  variant carriers: 748
genotype quality: GenotypeQuality
  all individuals: 3349
  bin: 7.5e0
  variant carriers: 169
genotype quality: GenotypeQuality
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  bin: 2.5e0
  variant carriers: 97
genotype quality: GenotypeQuality
  all individuals: 1753
  bin: 1.25e1
  variant carriers: 123
genotype quality: GenotypeQuality
  all individuals: 796
  bin: 5.25e1
  variant carriers: 470
genotype quality: GenotypeQuality
  all individuals: 2155
  bin: 3.25e1
  variant carriers: 310
genotype quality: GenotypeQuality
  all individuals: 1154
  bin: 9.25e1
  variant carriers: 1059
genotype quality: GenotypeQuality
  all individuals: 1563
  bin: 3.75e1
  variant carriers: 314
genotype quality: GenotypeQuality
  all individuals: 699
  bin: 5.75e1
  variant carriers: 510
genotype quality: GenotypeQuality
  all individuals: 1715
  bin: 1.75e1
  variant carriers: 210
genotype quality: GenotypeQuality
  all individuals: 4313
  bin: 2.25e1
  variant carriers: 223
genotype quality: GenotypeQuality
  all individuals: 1048
  bin: 4.75e1
  variant carriers: 504
genotype quality: GenotypeQuality
  all individuals: 1708
  bin: 2.75e1
  variant carriers: 205
genotype quality: GenotypeQuality
  all individuals: 16865
  bin: 9.75e1
  variant carriers: 16405
genotype quality: GenotypeQuality
  all individuals: 990
  bin: 8.25e1
  variant carriers: 888
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: European (Non-Finnish)
population: African
population: Other
population: South Asian
population: Latino
reference allele: T
site quality: DP
site quality: MQ
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: QD
site quality: MQRankSum

http://identifiers.org/exac.variant/4-190874202-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190874202
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 190874202
    reference: chr 4
allele count: 5
allele frequency: 5.865102639296188e-5
allele num: 85250
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435067
  ensembl transcript: ENST00000524583
  gene symbol: FRG1
  hgvsc: ENST00000524583.1:c.48+760C>A
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000226798
  ensembl transcript: ENST00000226798
  gene symbol: FRG1
  hgvsc: ENST00000226798.4:c.260-21C>A
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435943
  ensembl transcript: ENST00000531991
  gene symbol: FRG1
  hgvsc: ENST00000531991.2:c.71-21C>A
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl transcript: ENST00000514482
  gene symbol: FRG1
  hgvsc: ENST00000514482.1:n.246-21C>A
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000436535
  ensembl transcript: ENST00000533157
  gene symbol: FRG1
  hgvsc: ENST00000533157.1:c.*303-21C>A
  variant of: http://identifiers.org/hgnc/3954
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 13884
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 919
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2191
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 714
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1537
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3472
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 6966
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 1001
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1033
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10442
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10258
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3085
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1022
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2399
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2989
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 826
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2315
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1900
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1156
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 617
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3326
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 633
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4111
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5327
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3210
  bin: 2.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1520
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 466
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7619
  bin: 2.25e1
  variant carriers: 1
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: South Asian
population: African
population: Other
population: Latino
population: East Asian
reference allele: C
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: DP
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: FS
site quality: MQRankSum
site quality: QD
site quality: MQ

4-190874202-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190874202
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 190874202
    reference: chr 4
allele count: 3072
allele frequency: 3.603519061583578e-2
allele num: 85250
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl transcript: ENST00000514482
  gene symbol: FRG1
  hgvsc: ENST00000514482.1:n.246-21C>T
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435067
  ensembl transcript: ENST00000524583
  gene symbol: FRG1
  hgvsc: ENST00000524583.1:c.48+760C>T
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000226798
  ensembl transcript: ENST00000226798
  gene symbol: FRG1
  hgvsc: ENST00000226798.4:c.260-21C>T
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000436535
  ensembl transcript: ENST00000533157
  gene symbol: FRG1
  hgvsc: ENST00000533157.1:c.*303-21C>T
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435943
  ensembl transcript: ENST00000531991
  gene symbol: FRG1
  hgvsc: ENST00000531991.2:c.71-21C>T
  variant of: http://identifiers.org/hgnc/3954
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 3085
  bin: 2.75e1
  variant carriers: 357
genotype depth: GenotypeDepth
  all individuals: 324
  bin: 7.75e1
  variant carriers: 26
genotype depth: GenotypeDepth
  all individuals: 196
  bin: 8.75e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 446
  bin: 7.25e1
  variant carriers: 33
genotype depth: GenotypeDepth
  all individuals: 1022
  bin: 3.75e1
  variant carriers: 112
genotype depth: GenotypeDepth
  all individuals: 13884
  bin: 1.25e1
  variant carriers: 596
genotype depth: GenotypeDepth
  all individuals: 590
  bin: 6.75e1
  variant carriers: 41
genotype depth: GenotypeDepth
  all individuals: 919
  bin: 5.75e1
  variant carriers: 63
genotype depth: GenotypeDepth
  all individuals: 10258
  bin: 7.5e0
  variant carriers: 251
genotype depth: GenotypeDepth
  all individuals: 1001
  bin: 5.25e1
  variant carriers: 74
genotype depth: GenotypeDepth
  all individuals: 1537
  bin: 3.25e1
  variant carriers: 189
genotype depth: GenotypeDepth
  all individuals: 10442
  bin: 1.75e1
  variant carriers: 867
genotype depth: GenotypeDepth
  all individuals: 3472
  bin: 2.5e0
  variant carriers: 22
genotype depth: GenotypeDepth
  all individuals: 2191
  bin: 9.75e1
  variant carriers: 69
genotype depth: GenotypeDepth
  all individuals: 6966
  bin: 2.25e1
  variant carriers: 642
genotype depth: GenotypeDepth
  all individuals: 169
  bin: 9.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 1033
  bin: 4.75e1
  variant carriers: 79
genotype depth: GenotypeDepth
  all individuals: 257
  bin: 8.25e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 714
  bin: 6.25e1
  variant carriers: 51
genotype depth: GenotypeDepth
  all individuals: 996
  bin: 4.25e1
  variant carriers: 83
genotype quality: GenotypeQuality
  all individuals: 3326
  bin: 2.5e0
  variant carriers: 45
genotype quality: GenotypeQuality
  all individuals: 5327
  bin: 3.25e1
  variant carriers: 104
genotype quality: GenotypeQuality
  all individuals: 2989
  bin: 7.5e0
  variant carriers: 61
genotype quality: GenotypeQuality
  all individuals: 7619
  bin: 2.25e1
  variant carriers: 79
genotype quality: GenotypeQuality
  all individuals: 1520
  bin: 1.25e1
  variant carriers: 57
genotype quality: GenotypeQuality
  all individuals: 2399
  bin: 5.25e1
  variant carriers: 103
genotype quality: GenotypeQuality
  all individuals: 4987
  bin: 3.75e1
  variant carriers: 89
genotype quality: GenotypeQuality
  all individuals: 3210
  bin: 2.75e1
  variant carriers: 78
genotype quality: GenotypeQuality
  all individuals: 4111
  bin: 6.25e1
  variant carriers: 145
genotype quality: GenotypeQuality
  all individuals: 826
  bin: 8.25e1
  variant carriers: 107
genotype quality: GenotypeQuality
  all individuals: 3543
  bin: 4.75e1
  variant carriers: 121
genotype quality: GenotypeQuality
  all individuals: 848
  bin: 7.25e1
  variant carriers: 122
genotype quality: GenotypeQuality
  all individuals: 2315
  bin: 1.75e1
  variant carriers: 82
genotype quality: GenotypeQuality
  all individuals: 617
  bin: 5.75e1
  variant carriers: 115
genotype quality: GenotypeQuality
  all individuals: 1900
  bin: 6.75e1
  variant carriers: 136
num of homozygotes: 0
population: Other
population: East Asian
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: European (Non-Finnish)
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: DP
site quality: BaseQRankSum
site quality: QD
site quality: VQSLOD
site quality: MQ
site quality: ClippingRankSum
site quality: FS

4-190874203-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190874203
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 190874203
    reference: chr 4
allele count: 1
allele frequency: 1.095770326539557e-5
allele num: 91260
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435067
  ensembl transcript: ENST00000524583
  gene symbol: FRG1
  hgvsc: ENST00000524583.1:c.48+761A>G
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435943
  ensembl transcript: ENST00000531991
  gene symbol: FRG1
  hgvsc: ENST00000531991.2:c.71-20A>G
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl transcript: ENST00000514482
  gene symbol: FRG1
  hgvsc: ENST00000514482.1:n.246-20A>G
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000436535
  ensembl transcript: ENST00000533157
  gene symbol: FRG1
  hgvsc: ENST00000533157.1:c.*303-20A>G
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000226798
  ensembl transcript: ENST00000226798
  gene symbol: FRG1
  hgvsc: ENST00000226798.4:c.260-20A>G
  variant of: http://identifiers.org/hgnc/3954
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 13859
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 993
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 607
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 447
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3501
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 985
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 707
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1042
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10138
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 3120
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 200
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7273
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2191
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 916
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1551
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 176
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10243
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1031
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2654
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1252
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 909
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1241
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4788
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2165
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 634
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8243
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4090
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 313
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3335
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2388
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2219
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2766
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5831
  bin: 3.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: East Asian
population: African
population: South Asian
population: Other
population: European (Non-Finnish)
population: Latino
reference allele: A
site quality: VQSLOD
site quality: MQRankSum
site quality: QD
site quality: BaseQRankSum
site quality: MQ
site quality: FS
site quality: ClippingRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: ReadPosRankSum

4-190874206-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190874206
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 190874206
    reference: chr 4
allele count: 24064
allele frequency: 3.74199166511165e-1
allele num: 64308
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000226798
  ensembl transcript: ENST00000226798
  gene symbol: FRG1
  hgvsc: ENST00000226798.4:c.260-17T>A
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435067
  ensembl transcript: ENST00000524583
  gene symbol: FRG1
  hgvsc: ENST00000524583.1:c.48+764T>A
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000436535
  ensembl transcript: ENST00000533157
  gene symbol: FRG1
  hgvsc: ENST00000533157.1:c.*303-17T>A
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435943
  ensembl transcript: ENST00000531991
  gene symbol: FRG1
  hgvsc: ENST00000531991.2:c.71-17T>A
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl transcript: ENST00000514482
  gene symbol: FRG1
  hgvsc: ENST00000514482.1:n.246-17T>A
  variant of: http://identifiers.org/hgnc/3954
canonical: true
consequence: intron
filter: InbreedingCoeff_Filter
genotype depth: GenotypeDepth
  all individuals: 4005
  bin: 2.75e1
  variant carriers: 2641
genotype depth: GenotypeDepth
  all individuals: 12734
  bin: 1.25e1
  variant carriers: 3321
genotype depth: GenotypeDepth
  all individuals: 2661
  bin: 2.5e0
  variant carriers: 45
genotype depth: GenotypeDepth
  all individuals: 8858
  bin: 7.5e0
  variant carriers: 1003
genotype depth: GenotypeDepth
  all individuals: 970
  bin: 5.25e1
  variant carriers: 722
genotype depth: GenotypeDepth
  all individuals: 247
  bin: 8.75e1
  variant carriers: 217
genotype depth: GenotypeDepth
  all individuals: 838
  bin: 6.25e1
  variant carriers: 663
genotype depth: GenotypeDepth
  all individuals: 1092
  bin: 3.75e1
  variant carriers: 755
genotype depth: GenotypeDepth
  all individuals: 7548
  bin: 2.25e1
  variant carriers: 4238
genotype depth: GenotypeDepth
  all individuals: 326
  bin: 8.25e1
  variant carriers: 265
genotype depth: GenotypeDepth
  all individuals: 2362
  bin: 9.75e1
  variant carriers: 2186
genotype depth: GenotypeDepth
  all individuals: 687
  bin: 6.75e1
  variant carriers: 545
genotype depth: GenotypeDepth
  all individuals: 1863
  bin: 3.25e1
  variant carriers: 1318
genotype depth: GenotypeDepth
  all individuals: 917
  bin: 5.75e1
  variant carriers: 713
genotype depth: GenotypeDepth
  all individuals: 928
  bin: 4.25e1
  variant carriers: 624
genotype depth: GenotypeDepth
  all individuals: 11090
  bin: 1.75e1
  variant carriers: 4855
genotype depth: GenotypeDepth
  all individuals: 589
  bin: 7.25e1
  variant carriers: 477
genotype depth: GenotypeDepth
  all individuals: 889
  bin: 4.75e1
  variant carriers: 652
genotype depth: GenotypeDepth
  all individuals: 182
  bin: 9.25e1
  variant carriers: 161
genotype depth: GenotypeDepth
  all individuals: 393
  bin: 7.75e1
  variant carriers: 315
genotype quality: GenotypeQuality
  all individuals: 675
  bin: 5.25e1
  variant carriers: 469
genotype quality: GenotypeQuality
  all individuals: 1908
  bin: 3.25e1
  variant carriers: 318
genotype quality: GenotypeQuality
  all individuals: 1295
  bin: 3.75e1
  variant carriers: 322
genotype quality: GenotypeQuality
  all individuals: 675
  bin: 5.75e1
  variant carriers: 512
genotype quality: GenotypeQuality
  all individuals: 1448
  bin: 2.75e1
  variant carriers: 210
genotype quality: GenotypeQuality
  all individuals: 3003
  bin: 7.5e0
  variant carriers: 176
genotype quality: GenotypeQuality
  all individuals: 1523
  bin: 1.25e1
  variant carriers: 134
genotype quality: GenotypeQuality
  all individuals: 902
  bin: 4.75e1
  variant carriers: 511
genotype quality: GenotypeQuality
  all individuals: 753
  bin: 4.25e1
  variant carriers: 345
genotype quality: GenotypeQuality
  all individuals: 16848
  bin: 9.75e1
  variant carriers: 16410
genotype quality: GenotypeQuality
  all individuals: 1102
  bin: 7.75e1
  variant carriers: 990
genotype quality: GenotypeQuality
  all individuals: 951
  bin: 6.75e1
  variant carriers: 755
genotype quality: GenotypeQuality
  all individuals: 17534
  bin: 2.5e0
  variant carriers: 100
genotype quality: GenotypeQuality
  all individuals: 983
  bin: 8.25e1
  variant carriers: 893
genotype quality: GenotypeQuality
  all individuals: 1428
  bin: 1.75e1
  variant carriers: 206
num of homozygotes: 0
population: African
population: South Asian
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
population: Latino
reference allele: T
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: MQ
site quality: InbreedingCoeff
site quality: DP
site quality: QD
site quality: VQSLOD
site quality: MQRankSum
site quality: FS
site quality: ReadPosRankSum

4-190874208-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190874208
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 190874208
    reference: chr 4
allele count: 6
allele frequency: 6.401502219187436e-5
allele num: 93728
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000226798
  ensembl transcript: ENST00000226798
  gene symbol: FRG1
  hgvsc: ENST00000226798.4:c.260-15T>A
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435943
  ensembl transcript: ENST00000531991
  gene symbol: FRG1
  hgvsc: ENST00000531991.2:c.71-15T>A
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000436535
  ensembl transcript: ENST00000533157
  gene symbol: FRG1
  hgvsc: ENST00000533157.1:c.*303-15T>A
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435067
  ensembl transcript: ENST00000524583
  gene symbol: FRG1
  hgvsc: ENST00000524583.1:c.48+766T>A
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl transcript: ENST00000514482
  gene symbol: FRG1
  hgvsc: ENST00000514482.1:n.246-15T>A
  variant of: http://identifiers.org/hgnc/3954
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 3221
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1676
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1057
  bin: 3.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9361
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 930
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13365
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 830
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9788
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3966
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 930
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8010
  bin: 2.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 926
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2310
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1097
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7430
  bin: 6.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 741
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2215
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2684
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1084
  bin: 1.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3496
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 778
  bin: 5.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 802
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 260
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 344
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2755
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 9257
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5008
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6068
  bin: 3.25e1
  variant carriers: 1
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: European (Non-Finnish)
population: Other
population: East Asian
population: South Asian
reference allele: T
site quality: QD
site quality: DP
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: InbreedingCoeff
site quality: FS
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: ClippingRankSum

4-190874208-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190874208
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 190874208
    reference: chr 4
allele count: 10
allele frequency: 1.066917036531239e-4
allele num: 93728
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000436535
  ensembl transcript: ENST00000533157
  gene symbol: FRG1
  hgvsc: ENST00000533157.1:c.*303-15T>C
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000226798
  ensembl transcript: ENST00000226798
  gene symbol: FRG1
  hgvsc: ENST00000226798.4:c.260-15T>C
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435067
  ensembl transcript: ENST00000524583
  gene symbol: FRG1
  hgvsc: ENST00000524583.1:c.48+766T>C
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435943
  ensembl transcript: ENST00000531991
  gene symbol: FRG1
  hgvsc: ENST00000531991.2:c.71-15T>C
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl transcript: ENST00000514482
  gene symbol: FRG1
  hgvsc: ENST00000514482.1:n.246-15T>C
  variant of: http://identifiers.org/hgnc/3954
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 9788
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8010
  bin: 2.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 930
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 930
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 979
  bin: 5.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 830
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1057
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 662
  bin: 6.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3221
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 926
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1676
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9361
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13365
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3966
  bin: 2.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2310
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2684
  bin: 4.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 741
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9239
  bin: 9.75e1
  variant carriers: 4
genotype quality: GenotypeQuality
  all individuals: 1733
  bin: 1.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 260
  bin: 2.5e0
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 9257
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 6068
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2755
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2132
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 344
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7430
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3496
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2215
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 5008
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 778
  bin: 5.75e1
  variant carriers: 1
num of homozygotes: 0
population: Other
population: African
population: East Asian
population: South Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Latino
reference allele: T
site quality: InbreedingCoeff
site quality: DP
site quality: MQ
site quality: VQSLOD
site quality: FS
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: MQRankSum
site quality: QD

4-190874210-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190874210
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 190874210
    reference: chr 4
allele count: 1
allele frequency: 1.063920333645417e-5
allele num: 93992
alternate allele: C
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000226798
  ensembl transcript: ENST00000226798
  gene symbol: FRG1
  hgvsc: ENST00000226798.4:c.260-13T>C
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435943
  ensembl transcript: ENST00000531991
  gene symbol: FRG1
  hgvsc: ENST00000531991.2:c.71-13T>C
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000436535
  ensembl transcript: ENST00000533157
  gene symbol: FRG1
  hgvsc: ENST00000533157.1:c.*303-13T>C
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl transcript: ENST00000514482
  gene symbol: FRG1
  hgvsc: ENST00000514482.1:n.246-13T>C
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435067
  ensembl transcript: ENST00000524583
  gene symbol: FRG1
  hgvsc: ENST00000524583.1:c.48+768T>C
  variant of: http://identifiers.org/hgnc/3954
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 929
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 296
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9377
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13350
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 383
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3211
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9455
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 928
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 981
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1677
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2310
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8365
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3971
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 930
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1058
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 830
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 531
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 718
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2691
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 801
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 346
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3489
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 176
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2740
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1066
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2011
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1099
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1985
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6094
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7729
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5037
  bin: 3.75e1
  variant carriers: 0
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
population: Other
reference allele: T
site quality: ClippingRankSum
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: ReadPosRankSum

4-190874211-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190874211
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 190874211
    reference: chr 4
allele count: 1
allele frequency: 1.063920333645417e-5
allele num: 93992
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000436535
  ensembl transcript: ENST00000533157
  gene symbol: FRG1
  hgvsc: ENST00000533157.1:c.*303-12T>C
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435943
  ensembl transcript: ENST00000531991
  gene symbol: FRG1
  hgvsc: ENST00000531991.2:c.71-12T>C
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435067
  ensembl transcript: ENST00000524583
  gene symbol: FRG1
  hgvsc: ENST00000524583.1:c.48+769T>C
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl transcript: ENST00000514482
  gene symbol: FRG1
  hgvsc: ENST00000514482.1:n.246-12T>C
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000226798
  ensembl transcript: ENST00000226798
  gene symbol: FRG1
  hgvsc: ENST00000226798.4:c.260-12T>C
  variant of: http://identifiers.org/hgnc/3954
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 9238
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1680
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1057
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3983
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 928
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 929
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3204
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9402
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 830
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 980
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 931
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2310
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13326
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8596
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6087
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2656
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 457
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8315
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1964
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9586
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2767
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1053
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5021
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2147
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1093
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1795
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3474
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 746
  bin: 8.25e1
  variant carriers: 0
num of homozygotes: 0
population: African
population: Latino
population: European (Non-Finnish)
population: East Asian
population: South Asian
population: European (Finnish)
population: Other
reference allele: T
site quality: MQ
site quality: ReadPosRankSum
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: DP
site quality: MQRankSum
site quality: BaseQRankSum
site quality: VQSLOD

4-190874211-T-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190874211
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 190874211
    reference: chr 4
allele count: 1
allele frequency: 1.063920333645417e-5
allele num: 93992
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435067
  ensembl transcript: ENST00000524583
  gene symbol: FRG1
  hgvsc: ENST00000524583.1:c.48+769T>G
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000226798
  ensembl transcript: ENST00000226798
  gene symbol: FRG1
  hgvsc: ENST00000226798.4:c.260-12T>G
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435943
  ensembl transcript: ENST00000531991
  gene symbol: FRG1
  hgvsc: ENST00000531991.2:c.71-12T>G
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl transcript: ENST00000514482
  gene symbol: FRG1
  hgvsc: ENST00000514482.1:n.246-12T>G
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000436535
  ensembl transcript: ENST00000533157
  gene symbol: FRG1
  hgvsc: ENST00000533157.1:c.*303-12T>G
  variant of: http://identifiers.org/hgnc/3954
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 830
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3204
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9238
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9402
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1680
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 980
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 931
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 929
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 179
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 3983
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8596
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 297
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2310
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13326
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 382
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 928
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1057
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2656
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6087
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 457
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1400
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1964
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9268
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 160
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 746
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5021
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2147
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 533
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9586
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8315
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1053
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2767
  bin: 7.5e0
  variant carriers: 0
num of homozygotes: 0
population: East Asian
population: African
population: European (Non-Finnish)
population: Latino
population: European (Finnish)
population: Other
population: South Asian
reference allele: T
site quality: BaseQRankSum
site quality: FS
site quality: ReadPosRankSum
site quality: QD
site quality: MQRankSum
site quality: ClippingRankSum
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: MQ
site quality: DP

4-190874213-T-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190874213
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 190874213
    reference: chr 4
allele count: 15
allele frequency: 1.596050307505692e-4
allele num: 93982
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435067
  ensembl transcript: ENST00000524583
  gene symbol: FRG1
  hgvsc: ENST00000524583.1:c.48+771T>C
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435943
  ensembl transcript: ENST00000531991
  gene symbol: FRG1
  hgvsc: ENST00000531991.2:c.71-10T>C
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl transcript: ENST00000514482
  gene symbol: FRG1
  hgvsc: ENST00000514482.1:n.246-10T>C
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: NMD_transcript_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000436535
  ensembl transcript: ENST00000533157
  gene symbol: FRG1
  hgvsc: ENST00000533157.1:c.*303-10T>C
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: true
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000226798
  ensembl transcript: ENST00000226798
  gene symbol: FRG1
  hgvsc: ENST00000226798.4:c.260-10T>C
  variant of: http://identifiers.org/hgnc/3954
canonical: true
consequence: intron
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 930
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 928
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 13300
  bin: 1.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 8908
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 660
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8944
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 980
  bin: 5.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2311
  bin: 9.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 1057
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4000
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 3161
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 178
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 298
  bin: 8.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9442
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 930
  bin: 5.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 532
  bin: 7.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 1684
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 225
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 830
  bin: 6.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 185
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5082
  bin: 3.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1307
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 347
  bin: 8.75e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 2740
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 647
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6102
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 534
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1011
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1096
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1991
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9266
  bin: 9.75e1
  variant carriers: 10
genotype quality: GenotypeQuality
  all individuals: 3470
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9735
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8313
  bin: 6.25e1
  variant carriers: 0
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: Latino
population: South Asian
population: East Asian
population: European (Finnish)
reference allele: T
site quality: ReadPosRankSum
site quality: MQRankSum
site quality: FS
site quality: ClippingRankSum
site quality: MQ
site quality: QD
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff

4-190874219-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190874219
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 190874219
    reference: chr 4
allele count: 5
allele frequency: 5.308419152776303e-5
allele num: 94190
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435943
  ensembl transcript: ENST00000531991
  gene symbol: FRG1
  hgvsc: ENST00000531991.2:c.71-4A>G
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: true
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000226798
  ensembl transcript: ENST00000226798
  gene symbol: FRG1
  hgvsc: ENST00000226798.4:c.260-4A>G
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: splice_region_variant
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl transcript: ENST00000514482
  gene symbol: FRG1
  hgvsc: ENST00000514482.1:n.246-4A>G
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435067
  ensembl transcript: ENST00000524583
  gene symbol: FRG1
  hgvsc: ENST00000524583.1:c.48+777A>G
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: splice_region_variant
  consequence: intron_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000436535
  ensembl transcript: ENST00000533157
  gene symbol: FRG1
  hgvsc: ENST00000533157.1:c.*303-4A>G
  variant of: http://identifiers.org/hgnc/3954
canonical: true
consequence: splice region
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 9.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 9793
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4239
  bin: 2.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 981
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1055
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2992
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 935
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 294
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1726
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 13157
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 8067
  bin: 1.75e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 9541
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 927
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2311
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 926
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 661
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3505
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10122
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5171
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 790
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2084
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 189
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1981
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2359
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1031
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6117
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9271
  bin: 9.75e1
  variant carriers: 3
genotype quality: GenotypeQuality
  all individuals: 955
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 537
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2698
  bin: 7.5e0
  variant carriers: 0
hgvs: c.260-4A>G
num of homozygotes: 0
population: Latino
population: South Asian
population: African
population: East Asian
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: A
site quality: MQ
site quality: VQSLOD
site quality: MQRankSum
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: FS
site quality: QD
site quality: BaseQRankSum
site quality: ReadPosRankSum
site quality: DP

4-190874226-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190874226
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 190874226
    reference: chr 4
allele count: 6
allele frequency: 6.357279084551812e-5
allele num: 94380
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435067
  ensembl transcript: ENST00000524583
  gene symbol: FRG1
  hgvsc: ENST00000524583.1:c.48+784A>G
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000436535
  ensembl transcript: ENST00000533157
  gene symbol: FRG1
  hgvsc: ENST00000533157.1:c.*306A>G
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000226798
  ensembl transcript: ENST00000226798
  gene symbol: FRG1
  hgvsc: ENST00000226798.4:c.263A>G
  hgvsp: ENSP00000226798.4:p.Asp88Gly
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435943
  ensembl transcript: ENST00000531991
  gene symbol: FRG1
  hgvsc: ENST00000531991.2:c.74A>G
  hgvsp: ENSP00000435943.1:p.Asp25Gly
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000109536
  ensembl transcript: ENST00000514482
  gene symbol: FRG1
  hgvsc: ENST00000514482.1:n.249A>G
  variant of: http://identifiers.org/hgnc/3954
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 982
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 926
  bin: 4.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4302
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1756
  bin: 3.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12926
  bin: 1.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 10229
  bin: 2.25e1
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 2875
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 929
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 936
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7867
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9654
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1060
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2311
  bin: 9.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1061
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 180
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2054
  bin: 6.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 3546
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1096
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1413
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8566
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 795
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6130
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10203
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 938
  bin: 1.25e1
  variant carriers: 2
genotype quality: GenotypeQuality
  all individuals: 5159
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 409
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 352
  bin: 8.75e1
  variant carriers: 0
hgvs: p.Asp88Gly
num of homozygotes: 0
population: European (Non-Finnish)
population: European (Finnish)
population: Other
population: East Asian
population: African
population: Latino
population: South Asian
reference allele: A
site quality: QD
site quality: ClippingRankSum
site quality: FS
site quality: MQRankSum
site quality: VQSLOD
site quality: BaseQRankSum
site quality: DP
site quality: InbreedingCoeff
site quality: MQ
site quality: ReadPosRankSum

4-190874227-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190874227
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 190874227
    reference: chr 4
allele count: 0
allele frequency: 0.0e0
allele num: 94434
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000109536
  ensembl transcript: ENST00000514482
  gene symbol: FRG1
  hgvsc: ENST00000514482.1:n.250T>A
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000226798
  ensembl transcript: ENST00000226798
  gene symbol: FRG1
  hgvsc: ENST00000226798.4:c.264T>A
  hgvsp: ENSP00000226798.4:p.Asp88Glu
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435943
  ensembl transcript: ENST00000531991
  gene symbol: FRG1
  hgvsc: ENST00000531991.2:c.75T>A
  hgvsp: ENSP00000435943.1:p.Asp25Glu
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435067
  ensembl transcript: ENST00000524583
  gene symbol: FRG1
  hgvsc: ENST00000524583.1:c.48+785T>A
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000436535
  ensembl transcript: ENST00000533157
  gene symbol: FRG1
  hgvsc: ENST00000533157.1:c.*307T>A
  variant of: http://identifiers.org/hgnc/3954
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 7852
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9666
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 927
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 928
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10295
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12879
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2311
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2860
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1751
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1058
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4305
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 935
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 983
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2785
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6127
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2065
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1132
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 793
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 10117
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8311
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5147
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 738
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2058
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2673
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 929
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 179
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9274
  bin: 9.75e1
  variant carriers: 1
hgvs: p.Asp88Glu
num of homozygotes: 0
population: East Asian
population: African
population: Other
population: Latino
population: European (Finnish)
population: South Asian
population: European (Non-Finnish)
reference allele: T
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: DP
site quality: FS
site quality: QD
site quality: MQRankSum
site quality: MQ
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum

4-190874228-G-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190874228
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 190874228
    reference: chr 4
allele count: 1
allele frequency: 1.061007957559682e-5
allele num: 94250
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000226798
  ensembl transcript: ENST00000226798
  gene symbol: FRG1
  hgvsc: ENST00000226798.4:c.265G>A
  hgvsp: ENSP00000226798.4:p.Glu89Lys
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000436535
  ensembl transcript: ENST00000533157
  gene symbol: FRG1
  hgvsc: ENST00000533157.1:c.*308G>A
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435067
  ensembl transcript: ENST00000524583
  gene symbol: FRG1
  hgvsc: ENST00000524583.1:c.48+786G>A
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435943
  ensembl transcript: ENST00000531991
  gene symbol: FRG1
  hgvsc: ENST00000531991.2:c.76G>A
  hgvsp: ENSP00000435943.1:p.Glu26Lys
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000109536
  ensembl transcript: ENST00000514482
  gene symbol: FRG1
  hgvsc: ENST00000514482.1:n.251G>A
  variant of: http://identifiers.org/hgnc/3954
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 4283
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2849
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12853
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 928
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10357
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 983
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1058
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9661
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2311
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7862
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 927
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1763
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 935
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1092
  bin: 7.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 948
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 229
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1319
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9940
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5156
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2888
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2089
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2692
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 792
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 739
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3560
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 537
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 640
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Glu89Lys
num of homozygotes: 0
population: European (Finnish)
population: South Asian
population: Other
population: East Asian
population: Latino
population: European (Non-Finnish)
population: African
reference allele: G
site quality: BaseQRankSum
site quality: DP
site quality: MQ
site quality: FS
site quality: QD
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum

4-190874231-G-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190874231
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 190874231
    reference: chr 4
allele count: 0
allele frequency: 0.0e0
allele num: 94370
alternate allele: T
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435943
  ensembl transcript: ENST00000531991
  gene symbol: FRG1
  hgvsc: ENST00000531991.2:c.79G>T
  hgvsp: ENSP00000435943.1:p.Gly27Cys
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435067
  ensembl transcript: ENST00000524583
  gene symbol: FRG1
  hgvsc: ENST00000524583.1:c.48+789G>T
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000109536
  ensembl transcript: ENST00000514482
  gene symbol: FRG1
  hgvsc: ENST00000514482.1:n.254G>T
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000436535
  ensembl transcript: ENST00000533157
  gene symbol: FRG1
  hgvsc: ENST00000533157.1:c.*311G>T
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000226798
  ensembl transcript: ENST00000226798
  gene symbol: FRG1
  hgvsc: ENST00000226798.4:c.268G>T
  hgvsp: ENSP00000226798.4:p.Gly90Cys
  variant of: http://identifiers.org/hgnc/3954
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 928
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 180
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 829
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 983
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4295
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1061
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2311
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2834
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12800
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 9608
  bin: 7.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 381
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7837
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 10500
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 536
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 659
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 935
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1800
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 295
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 928
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9818
  bin: 2.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1117
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 240
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5155
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2061
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3559
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 353
  bin: 8.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2711
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1414
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 6106
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2891
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 933
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 754
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 799
  bin: 7.25e1
  variant carriers: 1
hgvs: p.Gly90Cys
num of homozygotes: 0
population: Other
population: European (Finnish)
population: Latino
population: African
population: South Asian
population: East Asian
population: European (Non-Finnish)
reference allele: G
site quality: ReadPosRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: FS
site quality: InbreedingCoeff
site quality: QD
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: DP

4-190874234-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190874234
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 190874234
    reference: chr 4
allele count: 32942
allele frequency: 4.387119113573407e-1
allele num: 75088
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000226798
  ensembl transcript: ENST00000226798
  gene symbol: FRG1
  hgvsc: ENST00000226798.4:c.271C>T
  hgvsp: ENSP00000226798.4:p.Pro91Ser
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435943
  ensembl transcript: ENST00000531991
  gene symbol: FRG1
  hgvsc: ENST00000531991.2:c.82C>T
  hgvsp: ENSP00000435943.1:p.Pro28Ser
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000109536
  ensembl transcript: ENST00000514482
  gene symbol: FRG1
  hgvsc: ENST00000514482.1:n.257C>T
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435067
  ensembl transcript: ENST00000524583
  gene symbol: FRG1
  hgvsc: ENST00000524583.1:c.48+792C>T
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000436535
  ensembl transcript: ENST00000533157
  gene symbol: FRG1
  hgvsc: ENST00000533157.1:c.*314C>T
  variant of: http://identifiers.org/hgnc/3954
canonical: true
consequence: missense
filter: InbreedingCoeff_Filter
genotype depth: GenotypeDepth
  all individuals: 882
  bin: 6.25e1
  variant carriers: 609
genotype depth: GenotypeDepth
  all individuals: 902
  bin: 5.75e1
  variant carriers: 634
genotype depth: GenotypeDepth
  all individuals: 12193
  bin: 1.75e1
  variant carriers: 7998
genotype depth: GenotypeDepth
  all individuals: 918
  bin: 5.25e1
  variant carriers: 607
genotype depth: GenotypeDepth
  all individuals: 223
  bin: 9.25e1
  variant carriers: 193
genotype depth: GenotypeDepth
  all individuals: 5171
  bin: 2.75e1
  variant carriers: 4148
genotype depth: GenotypeDepth
  all individuals: 976
  bin: 4.25e1
  variant carriers: 693
genotype depth: GenotypeDepth
  all individuals: 11083
  bin: 1.25e1
  variant carriers: 5469
genotype depth: GenotypeDepth
  all individuals: 878
  bin: 4.75e1
  variant carriers: 618
genotype depth: GenotypeDepth
  all individuals: 2052
  bin: 2.5e0
  variant carriers: 52
genotype depth: GenotypeDepth
  all individuals: 337
  bin: 8.25e1
  variant carriers: 278
genotype depth: GenotypeDepth
  all individuals: 2533
  bin: 3.25e1
  variant carriers: 2080
genotype depth: GenotypeDepth
  all individuals: 723
  bin: 6.75e1
  variant carriers: 520
genotype depth: GenotypeDepth
  all individuals: 9005
  bin: 2.25e1
  variant carriers: 7151
genotype depth: GenotypeDepth
  all individuals: 6348
  bin: 7.5e0
  variant carriers: 1601
genotype depth: GenotypeDepth
  all individuals: 287
  bin: 8.75e1
  variant carriers: 255
genotype depth: GenotypeDepth
  all individuals: 1302
  bin: 3.75e1
  variant carriers: 1030
genotype depth: GenotypeDepth
  all individuals: 505
  bin: 7.75e1
  variant carriers: 392
genotype depth: GenotypeDepth
  all individuals: 2885
  bin: 9.75e1
  variant carriers: 2800
genotype depth: GenotypeDepth
  all individuals: 591
  bin: 7.25e1
  variant carriers: 413
genotype quality: GenotypeQuality
  all individuals: 1243
  bin: 8.75e1
  variant carriers: 1175
genotype quality: GenotypeQuality
  all individuals: 1929
  bin: 3.25e1
  variant carriers: 1197
genotype quality: GenotypeQuality
  all individuals: 1891
  bin: 5.25e1
  variant carriers: 1681
genotype quality: GenotypeQuality
  all individuals: 14447
  bin: 9.75e1
  variant carriers: 14196
genotype quality: GenotypeQuality
  all individuals: 3183
  bin: 7.5e0
  variant carriers: 745
genotype quality: GenotypeQuality
  all individuals: 1630
  bin: 5.75e1
  variant carriers: 1494
genotype quality: GenotypeQuality
  all individuals: 12818
  bin: 2.5e0
  variant carriers: 487
genotype quality: GenotypeQuality
  all individuals: 2894
  bin: 2.25e1
  variant carriers: 1197
genotype quality: GenotypeQuality
  all individuals: 1803
  bin: 1.75e1
  variant carriers: 881
genotype quality: GenotypeQuality
  all individuals: 1769
  bin: 4.25e1
  variant carriers: 1472
genotype quality: GenotypeQuality
  all individuals: 1965
  bin: 1.25e1
  variant carriers: 918
genotype quality: GenotypeQuality
  all individuals: 1343
  bin: 7.75e1
  variant carriers: 1286
genotype quality: GenotypeQuality
  all individuals: 1869
  bin: 4.75e1
  variant carriers: 1571
genotype quality: GenotypeQuality
  all individuals: 1738
  bin: 6.25e1
  variant carriers: 1497
hgvs: p.Pro91Ser
num of homozygotes: 0
population: East Asian
population: African
population: South Asian
population: Latino
population: European (Finnish)
population: European (Non-Finnish)
population: Other
reference allele: C
site quality: VQSLOD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: ClippingRankSum
site quality: ReadPosRankSum
site quality: FS
site quality: MQ
site quality: DP
site quality: MQRankSum
site quality: QD

4-190874237-A-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190874237
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 190874237
    reference: chr 4
allele count: 3
allele frequency: 3.018108651911469e-5
allele num: 99400
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435067
  ensembl transcript: ENST00000524583
  gene symbol: FRG1
  hgvsc: ENST00000524583.1:c.48+795A>G
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000436535
  ensembl transcript: ENST00000533157
  gene symbol: FRG1
  hgvsc: ENST00000533157.1:c.*317A>G
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000226798
  ensembl transcript: ENST00000226798
  gene symbol: FRG1
  hgvsc: ENST00000226798.4:c.274A>G
  hgvsp: ENSP00000226798.4:p.Ser92Gly
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000109536
  ensembl transcript: ENST00000514482
  gene symbol: FRG1
  hgvsc: ENST00000514482.1:n.260A>G
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435943
  ensembl transcript: ENST00000531991
  gene symbol: FRG1
  hgvsc: ENST00000531991.2:c.85A>G
  hgvsp: ENSP00000435943.1:p.Ser29Gly
  variant of: http://identifiers.org/hgnc/3954
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2775
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 8195
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12074
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 956
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4385
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 237
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 325
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 638
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2526
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1995
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1216
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 175
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7568
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 395
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 861
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 521
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 927
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12391
  bin: 1.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 831
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4425
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2282
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5431
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4686
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 208
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 951
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2620
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1197
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 617
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 7057
  bin: 2.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2282
  bin: 7.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 929
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2425
  bin: 6.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1350
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Ser92Gly
num of homozygotes: 0
population: Latino
population: African
population: European (Finnish)
population: Other
population: East Asian
population: South Asian
population: European (Non-Finnish)
reference allele: A
site quality: FS
site quality: InbreedingCoeff
site quality: VQSLOD
site quality: QD
site quality: ClippingRankSum
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: DP

4-190874240-C-G
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190874240
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 190874240
    reference: chr 4
allele count: 303
allele frequency: 3.161189358372457e-3
allele num: 95850
alternate allele: G
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435943
  ensembl transcript: ENST00000531991
  gene symbol: FRG1
  hgvsc: ENST00000531991.2:c.88C>G
  hgvsp: ENSP00000435943.1:p.Pro30Ala
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435067
  ensembl transcript: ENST00000524583
  gene symbol: FRG1
  hgvsc: ENST00000524583.1:c.48+798C>G
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000436535
  ensembl transcript: ENST00000533157
  gene symbol: FRG1
  hgvsc: ENST00000533157.1:c.*320C>G
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000109536
  ensembl transcript: ENST00000514482
  gene symbol: FRG1
  hgvsc: ENST00000514482.1:n.263C>G
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000226798
  ensembl transcript: ENST00000226798
  gene symbol: FRG1
  hgvsc: ENST00000226798.4:c.277C>G
  hgvsp: ENSP00000226798.4:p.Pro93Ala
  variant of: http://identifiers.org/hgnc/3954
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 867
  bin: 4.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2009
  bin: 3.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 2803
  bin: 9.75e1
  variant carriers: 172
genotype depth: GenotypeDepth
  all individuals: 1215
  bin: 3.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 949
  bin: 5.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 995
  bin: 4.25e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 4359
  bin: 2.75e1
  variant carriers: 18
genotype depth: GenotypeDepth
  all individuals: 2543
  bin: 2.5e0
  variant carriers: 2
genotype depth: GenotypeDepth
  all individuals: 12360
  bin: 1.25e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 529
  bin: 7.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 8431
  bin: 2.25e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 11919
  bin: 1.75e1
  variant carriers: 34
genotype depth: GenotypeDepth
  all individuals: 634
  bin: 6.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 230
  bin: 8.75e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 167
  bin: 9.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 832
  bin: 6.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 7559
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 386
  bin: 7.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 8.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 920
  bin: 5.75e1
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 2581
  bin: 7.5e0
  variant carriers: 17
genotype quality: GenotypeQuality
  all individuals: 948
  bin: 7.25e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 1522
  bin: 2.5e0
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 5086
  bin: 3.75e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 5147
  bin: 3.25e1
  variant carriers: 17
genotype quality: GenotypeQuality
  all individuals: 2516
  bin: 4.25e1
  variant carriers: 26
genotype quality: GenotypeQuality
  all individuals: 1149
  bin: 1.25e1
  variant carriers: 19
genotype quality: GenotypeQuality
  all individuals: 459
  bin: 8.75e1
  variant carriers: 15
genotype quality: GenotypeQuality
  all individuals: 1317
  bin: 7.75e1
  variant carriers: 7
genotype quality: GenotypeQuality
  all individuals: 7155
  bin: 2.25e1
  variant carriers: 18
genotype quality: GenotypeQuality
  all individuals: 4488
  bin: 4.75e1
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 945
  bin: 8.25e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 2360
  bin: 6.75e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 2104
  bin: 1.75e1
  variant carriers: 14
hgvs: p.Pro93Ala
num of homozygotes: 0
population: European (Finnish)
population: Other
population: European (Non-Finnish)
population: Latino
population: African
population: East Asian
population: South Asian
reference allele: C
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: FS
site quality: VQSLOD
site quality: QD
site quality: MQ
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum

4-190874242-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190874242
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 190874242
    reference: chr 4
allele count: 301
allele frequency: 3.114781240945403e-3
allele num: 96636
alternate allele: A
annotation: Annotation
  canonical: true
  consequence: synonymous_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000226798
  ensembl transcript: ENST00000226798
  gene symbol: FRG1
  hgvsc: ENST00000226798.4:c.279T>A
  hgvsp: ENST00000226798.4:c.279T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000109536
  ensembl transcript: ENST00000514482
  gene symbol: FRG1
  hgvsc: ENST00000514482.1:n.265T>A
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: synonymous_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435943
  ensembl transcript: ENST00000531991
  gene symbol: FRG1
  hgvsc: ENST00000531991.2:c.90T>A
  hgvsp: ENST00000531991.2:c.90T>A(p.%3D)
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435067
  ensembl transcript: ENST00000524583
  gene symbol: FRG1
  hgvsc: ENST00000524583.1:c.48+800T>A
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000436535
  ensembl transcript: ENST00000533157
  gene symbol: FRG1
  hgvsc: ENST00000533157.1:c.*322T>A
  variant of: http://identifiers.org/hgnc/3954
canonical: true
consequence: synonymous
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 7548
  bin: 7.5e0
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 640
  bin: 6.75e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 2808
  bin: 9.75e1
  variant carriers: 174
genotype depth: GenotypeDepth
  all individuals: 232
  bin: 8.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 1221
  bin: 3.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2514
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 4611
  bin: 2.75e1
  variant carriers: 20
genotype depth: GenotypeDepth
  all individuals: 833
  bin: 6.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 951
  bin: 5.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 12261
  bin: 1.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 399
  bin: 7.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 10968
  bin: 1.75e1
  variant carriers: 30
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 4.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 2038
  bin: 3.25e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 329
  bin: 8.25e1
  variant carriers: 6
genotype depth: GenotypeDepth
  all individuals: 913
  bin: 5.75e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 9265
  bin: 2.25e1
  variant carriers: 25
genotype depth: GenotypeDepth
  all individuals: 165
  bin: 9.25e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 516
  bin: 7.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 863
  bin: 4.75e1
  variant carriers: 5
genotype quality: GenotypeQuality
  all individuals: 2583
  bin: 6.75e1
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 1504
  bin: 1.75e1
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 9409
  bin: 9.75e1
  variant carriers: 97
genotype quality: GenotypeQuality
  all individuals: 1046
  bin: 1.25e1
  variant carriers: 20
genotype quality: GenotypeQuality
  all individuals: 5136
  bin: 3.25e1
  variant carriers: 15
genotype quality: GenotypeQuality
  all individuals: 469
  bin: 8.75e1
  variant carriers: 15
genotype quality: GenotypeQuality
  all individuals: 1365
  bin: 7.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 503
  bin: 5.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 5056
  bin: 3.75e1
  variant carriers: 12
genotype quality: GenotypeQuality
  all individuals: 976
  bin: 7.25e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 4045
  bin: 4.75e1
  variant carriers: 15
genotype quality: GenotypeQuality
  all individuals: 3036
  bin: 2.75e1
  variant carriers: 21
genotype quality: GenotypeQuality
  all individuals: 1159
  bin: 2.5e0
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 2585
  bin: 7.5e0
  variant carriers: 18
hgvs: p.Pro93Pro
num of homozygotes: 0
population: European (Finnish)
population: African
population: Latino
population: South Asian
population: European (Non-Finnish)
population: East Asian
population: Other
reference allele: T
site quality: InbreedingCoeff
site quality: ClippingRankSum
site quality: VQSLOD
site quality: MQ
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: BaseQRankSum
site quality: DP
site quality: FS
site quality: QD

http://identifiers.org/exac.variant/4-190874243-C-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190874243
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 190874243
    reference: chr 4
allele count: 301
allele frequency: 3.109054475592373e-3
allele num: 96814
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435943
  ensembl transcript: ENST00000531991
  gene symbol: FRG1
  hgvsc: ENST00000531991.2:c.91C>A
  hgvsp: ENSP00000435943.1:p.Pro31Thr
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435067
  ensembl transcript: ENST00000524583
  gene symbol: FRG1
  hgvsc: ENST00000524583.1:c.48+801C>A
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000436535
  ensembl transcript: ENST00000533157
  gene symbol: FRG1
  hgvsc: ENST00000533157.1:c.*323C>A
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000226798
  ensembl transcript: ENST00000226798
  gene symbol: FRG1
  hgvsc: ENST00000226798.4:c.280C>A
  hgvsp: ENSP00000226798.4:p.Pro94Thr
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000109536
  ensembl transcript: ENST00000514482
  gene symbol: FRG1
  hgvsc: ENST00000514482.1:n.266C>A
  variant of: http://identifiers.org/hgnc/3954
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 4.25e1
  variant carriers: 7
genotype depth: GenotypeDepth
  all individuals: 863
  bin: 4.75e1
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 836
  bin: 6.25e1
  variant carriers: 10
genotype depth: GenotypeDepth
  all individuals: 10114
  bin: 1.75e1
  variant carriers: 31
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 8.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 9.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 12214
  bin: 1.25e1
  variant carriers: 19
genotype depth: GenotypeDepth
  all individuals: 2049
  bin: 3.25e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 952
  bin: 5.25e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 1228
  bin: 3.75e1
  variant carriers: 3
genotype depth: GenotypeDepth
  all individuals: 10074
  bin: 2.25e1
  variant carriers: 24
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 7.25e1
  variant carriers: 11
genotype depth: GenotypeDepth
  all individuals: 4732
  bin: 2.75e1
  variant carriers: 21
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 7.75e1
  variant carriers: 8
genotype depth: GenotypeDepth
  all individuals: 2500
  bin: 2.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 7535
  bin: 7.5e0
  variant carriers: 4
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 6.75e1
  variant carriers: 5
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 8.75e1
  variant carriers: 12
genotype depth: GenotypeDepth
  all individuals: 908
  bin: 5.75e1
  variant carriers: 9
genotype depth: GenotypeDepth
  all individuals: 2807
  bin: 9.75e1
  variant carriers: 174
genotype quality: GenotypeQuality
  all individuals: 1119
  bin: 2.5e0
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 5100
  bin: 3.25e1
  variant carriers: 15
genotype quality: GenotypeQuality
  all individuals: 2625
  bin: 7.5e0
  variant carriers: 18
genotype quality: GenotypeQuality
  all individuals: 467
  bin: 8.75e1
  variant carriers: 15
genotype quality: GenotypeQuality
  all individuals: 982
  bin: 7.25e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 245
  bin: 5.75e1
  variant carriers: 9
genotype quality: GenotypeQuality
  all individuals: 3544
  bin: 4.75e1
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 1371
  bin: 7.75e1
  variant carriers: 8
genotype quality: GenotypeQuality
  all individuals: 1132
  bin: 1.75e1
  variant carriers: 14
genotype quality: GenotypeQuality
  all individuals: 9415
  bin: 9.75e1
  variant carriers: 97
genotype quality: GenotypeQuality
  all individuals: 8715
  bin: 6.25e1
  variant carriers: 16
genotype quality: GenotypeQuality
  all individuals: 2671
  bin: 6.75e1
  variant carriers: 13
genotype quality: GenotypeQuality
  all individuals: 8268
  bin: 2.25e1
  variant carriers: 17
genotype quality: GenotypeQuality
  all individuals: 1004
  bin: 1.25e1
  variant carriers: 20
hgvs: p.Pro94Thr
num of homozygotes: 0
population: Other
population: South Asian
population: European (Non-Finnish)
population: African
population: East Asian
population: Latino
population: European (Finnish)
reference allele: C
site quality: ClippingRankSum
site quality: MQ
site quality: FS
site quality: VQSLOD
site quality: DP
site quality: QD
site quality: InbreedingCoeff
site quality: BaseQRankSum
site quality: MQRankSum
site quality: ReadPosRankSum

4-190874243-C-T
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190874243
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 190874243
    reference: chr 4
allele count: 1
allele frequency: 1.032908463651951e-5
allele num: 96814
alternate allele: T
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000226798
  ensembl transcript: ENST00000226798
  gene symbol: FRG1
  hgvsc: ENST00000226798.4:c.280C>T
  hgvsp: ENSP00000226798.4:p.Pro94Ser
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435067
  ensembl transcript: ENST00000524583
  gene symbol: FRG1
  hgvsc: ENST00000524583.1:c.48+801C>T
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435943
  ensembl transcript: ENST00000531991
  gene symbol: FRG1
  hgvsc: ENST00000531991.2:c.91C>T
  hgvsp: ENSP00000435943.1:p.Pro31Ser
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000436535
  ensembl transcript: ENST00000533157
  gene symbol: FRG1
  hgvsc: ENST00000533157.1:c.*323C>T
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000109536
  ensembl transcript: ENST00000514482
  gene symbol: FRG1
  hgvsc: ENST00000514482.1:n.266C>T
  variant of: http://identifiers.org/hgnc/3954
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.60to99.80
genotype depth: GenotypeDepth
  all individuals: 2049
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7535
  bin: 7.5e0
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 12214
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 401
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2500
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10114
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 863
  bin: 4.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 163
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 836
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1228
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 234
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 639
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2807
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 515
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 332
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 908
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4732
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10074
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 952
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1371
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 972
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1119
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5100
  bin: 3.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 245
  bin: 5.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 3019
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 8715
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 5005
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2625
  bin: 7.5e0
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 982
  bin: 7.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1438
  bin: 5.25e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 1004
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1132
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2671
  bin: 6.75e1
  variant carriers: 0
hgvs: p.Pro94Ser
num of homozygotes: 0
population: Latino
population: European (Finnish)
population: Other
population: African
population: South Asian
population: European (Non-Finnish)
population: East Asian
reference allele: C
site quality: QD
site quality: FS
site quality: InbreedingCoeff
site quality: MQRankSum
site quality: BaseQRankSum
site quality: MQ
site quality: VQSLOD
site quality: ReadPosRankSum
site quality: DP
site quality: ClippingRankSum

4-190874246-G-C
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190874246
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 190874246
    reference: chr 4
allele count: 1
allele frequency: 9.996001599360256e-6
allele num: 100040
alternate allele: C
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000436535
  ensembl transcript: ENST00000533157
  gene symbol: FRG1
  hgvsc: ENST00000533157.1:c.*326G>C
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000109536
  ensembl transcript: ENST00000514482
  gene symbol: FRG1
  hgvsc: ENST00000514482.1:n.269G>C
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435943
  ensembl transcript: ENST00000531991
  gene symbol: FRG1
  hgvsc: ENST00000531991.2:c.94G>C
  hgvsp: ENSP00000435943.1:p.Glu32Gln
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000226798
  ensembl transcript: ENST00000226798
  gene symbol: FRG1
  hgvsc: ENST00000226798.4:c.283G>C
  hgvsp: ENSP00000226798.4:p.Glu95Gln
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435067
  ensembl transcript: ENST00000524583
  gene symbol: FRG1
  hgvsc: ENST00000524583.1:c.48+804G>C
  variant of: http://identifiers.org/hgnc/3954
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 841
  bin: 6.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 11938
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 899
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7591
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 12705
  bin: 2.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7458
  bin: 1.75e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 2437
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 954
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1240
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 998
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5039
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2123
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2788
  bin: 9.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 12165
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 559
  bin: 1.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 571
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1021
  bin: 8.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 779
  bin: 5.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 9907
  bin: 9.75e1
  variant carriers: 1
genotype quality: GenotypeQuality
  all individuals: 2913
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1901
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2349
  bin: 4.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 131
  bin: 2.5e0
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1471
  bin: 7.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 4758
  bin: 3.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 654
  bin: 9.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 191
  bin: 5.75e1
  variant carriers: 0
hgvs: p.Glu95Gln
num of homozygotes: 0
population: European (Non-Finnish)
population: Other
population: African
population: European (Finnish)
population: Latino
population: South Asian
population: East Asian
reference allele: G
site quality: InbreedingCoeff
site quality: QD
site quality: ClippingRankSum
site quality: MQ
site quality: DP
site quality: BaseQRankSum
site quality: FS
site quality: MQRankSum
site quality: ReadPosRankSum
site quality: VQSLOD

4-190874253-T-A
type: Variant
location: Region
  begin: Position
    type: ExactPosition
    position: 190874253
    reference: chr 4
  end: Position
    type: ExactPosition
    position: 190874253
    reference: chr 4
allele count: 1
allele frequency: 9.94431185361973e-6
allele num: 100560
alternate allele: A
annotation: Annotation
  canonical: false
  consequence: non_coding_transcript_variant
  consequence: non_coding_transcript_exon_variant
  ensembl gene: ENSG00000109536
  ensembl transcript: ENST00000514482
  gene symbol: FRG1
  hgvsc: ENST00000514482.1:n.276T>A
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: intron_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435067
  ensembl transcript: ENST00000524583
  gene symbol: FRG1
  hgvsc: ENST00000524583.1:c.48+811T>A
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: missense_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000435943
  ensembl transcript: ENST00000531991
  gene symbol: FRG1
  hgvsc: ENST00000531991.2:c.101T>A
  hgvsp: ENSP00000435943.1:p.Phe34Tyr
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: false
  consequence: 3_prime_UTR_variant
  consequence: NMD_transcript_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000436535
  ensembl transcript: ENST00000533157
  gene symbol: FRG1
  hgvsc: ENST00000533157.1:c.*333T>A
  variant of: http://identifiers.org/hgnc/3954
annotation: Annotation
  canonical: true
  consequence: missense_variant
  ensembl gene: ENSG00000109536
  ensembl protein: ENSP00000226798
  ensembl transcript: ENST00000226798
  gene symbol: FRG1
  hgvsc: ENST00000226798.4:c.290T>A
  hgvsp: ENSP00000226798.4:p.Phe97Tyr
  variant of: http://identifiers.org/hgnc/3954
canonical: true
consequence: missense
filter: VQSRTrancheSNP99.80to99.90
genotype depth: GenotypeDepth
  all individuals: 870
  bin: 4.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2246
  bin: 3.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 16541
  bin: 2.25e1
  variant carriers: 1
genotype depth: GenotypeDepth
  all individuals: 899
  bin: 5.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2156
  bin: 2.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 2788
  bin: 9.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 391
  bin: 7.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 4394
  bin: 1.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 5630
  bin: 2.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 531
  bin: 7.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 999
  bin: 4.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 7729
  bin: 7.5e0
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 645
  bin: 6.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 10619
  bin: 1.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 331
  bin: 8.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 172
  bin: 9.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 226
  bin: 8.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 1260
  bin: 3.75e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 954
  bin: 5.25e1
  variant carriers: 0
genotype depth: GenotypeDepth
  all individuals: 841
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 16061
  bin: 6.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 2703
  bin: 2.75e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 318
  bin: 1.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1165
  bin: 4.25e1
  variant carriers: 0
genotype quality: GenotypeQuality
  all individuals: 1559
  bin: 7.75e1
  variant carriers: 0
hgvs: p.Phe97Tyr
num of homozygotes: 0
reference allele: T

GenotypeQuality
all individuals: 34170
bin: 9.75e1
variant carriers: 7

GenotypeQuality
all individuals: 2436
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2396
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 12
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3254
bin: 6.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9584
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 7
allele frequency: 1.064606399805329e-4
allele num: 65752
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 5.21e-1

DP
type: SiteQuality
SIO_000300: 2.518305e6

BaseQRankSum
type: SiteQuality
SIO_000300: 5.8e-2

MQ
type: SiteQuality
SIO_000300: 5.109e1

QD
type: SiteQuality
SIO_000300: 1.244e1

VQSLOD
type: SiteQuality
SIO_000300: -1.234e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.33e-1

MQRankSum
type: SiteQuality
SIO_000300: 7.11e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

ReadPosRankSum
type: SiteQuality
SIO_000300: 2.11e-1

GenotypeQuality
all individuals: 3245
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 73
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34169
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 7
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 46
bin: 3.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8652
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.5220700152207e-5
allele num: 65700
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9566
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -1.53e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.39e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.87e-1

QD
type: SiteQuality
SIO_000300: 1.316e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.0e-4

BaseQRankSum
type: SiteQuality
SIO_000300: 6.48e0

FS
type: SiteQuality
SIO_000300: 4.804e0

DP
type: SiteQuality
SIO_000300: 2.515516e6

MQRankSum
type: SiteQuality
SIO_000300: 3.74e-1

MQ
type: SiteQuality
SIO_000300: 5.116e1

GenotypeQuality
all individuals: 1470
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2381
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2396
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1579
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3246
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 34170
bin: 9.75e1
variant carriers: 1

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 65694
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.155802126675913e-4
allele num: 8652
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11576
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9556
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 4.945e1

VQSLOD
type: SiteQuality
SIO_000300: -1.51e0

ClippingRankSum
type: SiteQuality
SIO_000300: 5.07e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 5.0e-4

MQRankSum
type: SiteQuality
SIO_000300: -2.08e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.05e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.172e0

FS
type: SiteQuality
SIO_000300: 5.22e-1

QD
type: SiteQuality
SIO_000300: 1.075e1

DP
type: SiteQuality
SIO_000300: 2.515662e6

GenotypeQuality
all individuals: 8
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 13
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1579
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2396
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GenotypeQuality
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GenotypeQuality
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bin: 9.25e1
variant carriers: 0

East Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

South Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
allele num: 9556
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.522209029743965e-5
allele num: 65694
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

Latino
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allele frequency: 8.638562543192812e-5
allele num: 11576
num of homozygotes: 0

InbreedingCoeff
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BaseQRankSum
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MQ
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SIO_000300: 4.945e1

VQSLOD
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ReadPosRankSum
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QD
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DP
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ClippingRankSum
type: SiteQuality
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MQRankSum
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 5.22e-1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65650
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8652
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Other
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allele frequency: 0.0e0
allele num: 904
num of homozygotes: 0

African
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allele count: 0
allele frequency: 0.0e0
allele num: 9542
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 16512
num of homozygotes: 0

Latino
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allele frequency: 8.640055296353897e-5
allele num: 11574
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
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InbreedingCoeff
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FS
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MQ
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QD
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MQRankSum
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VQSLOD
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ReadPosRankSum
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BaseQRankSum
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DP
type: SiteQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 65638
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
allele num: 8652
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African
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Other
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allele frequency: 0.0e0
allele num: 904
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Latino
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allele frequency: 0.0e0
allele num: 11574
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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allele num: 16512
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MQRankSum
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MQ
type: SiteQuality
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ReadPosRankSum
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DP
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FS
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VQSLOD
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InbreedingCoeff
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ClippingRankSum
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BaseQRankSum
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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Latino
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allele frequency: 0.0e0
allele num: 11574
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European (Non-Finnish)
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allele count: 1
allele frequency: 1.525273786644703e-5
allele num: 65562
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
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East Asian
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allele num: 8652
num of homozygotes: 0

African
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VQSLOD
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FS
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ClippingRankSum
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ReadPosRankSum
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QD
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BaseQRankSum
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InbreedingCoeff
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MQ
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MQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele frequency: 0.0e0
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African
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Latino
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allele frequency: 8.640055296353897e-5
allele num: 11574
num of homozygotes: 0

South Asian
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allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 15
allele frequency: 2.300260696212237e-4
allele num: 65210
num of homozygotes: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
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InbreedingCoeff
type: SiteQuality
SIO_000300: -1.6e-3

MQRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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BaseQRankSum
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QD
type: SiteQuality
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ReadPosRankSum
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MQ
type: SiteQuality
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FS
type: SiteQuality
SIO_000300: 5.28e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.06e-1

DP
type: SiteQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele frequency: 6.062810719049351e-5
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num of homozygotes: 0

European (Non-Finnish)
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allele frequency: 1.538508877196221e-5
allele num: 64998
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Latino
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African
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allele frequency: 1.085540599218411e-4
allele num: 9212
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Other
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allele num: 900
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East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8644
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6610
num of homozygotes: 0

DP
type: SiteQuality
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QD
type: SiteQuality
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VQSLOD
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BaseQRankSum
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ClippingRankSum
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MQRankSum
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FS
type: SiteQuality
SIO_000300: 3.7428e1

InbreedingCoeff
type: SiteQuality
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MQ
type: SiteQuality
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8644
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European (Finnish)
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allele frequency: 0.0e0
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South Asian
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allele num: 16494
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Latino
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African
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allele num: 9212
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European (Non-Finnish)
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allele frequency: 0.0e0
allele num: 64998
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Other
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allele num: 900
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InbreedingCoeff
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BaseQRankSum
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ReadPosRankSum
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DP
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MQRankSum
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ClippingRankSum
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QD
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FS
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VQSLOD
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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South Asian
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European (Finnish)
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African
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Other
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Latino
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European (Non-Finnish)
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allele frequency: 6.163138270007087e-5
allele num: 64902
num of homozygotes: 0

ReadPosRankSum
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FS
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ClippingRankSum
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MQ
type: SiteQuality
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BaseQRankSum
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InbreedingCoeff
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MQRankSum
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VQSLOD
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DP
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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South Asian
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Latino
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African
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East Asian
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European (Non-Finnish)
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Other
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FS
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MQRankSum
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VQSLOD
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ClippingRankSum
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InbreedingCoeff
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BaseQRankSum
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DP
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QD
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MQ
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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South Asian
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Latino
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Other
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European (Non-Finnish)
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European (Finnish)
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African
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allele num: 9074
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InbreedingCoeff
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VQSLOD
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FS
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MQ
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MQRankSum
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BaseQRankSum
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ClippingRankSum
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ReadPosRankSum
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DP
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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European (Finnish)
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East Asian
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Other
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African
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Latino
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South Asian
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European (Non-Finnish)
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VQSLOD
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ClippingRankSum
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MQRankSum
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InbreedingCoeff
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FS
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DP
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MQ
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BaseQRankSum
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QD
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ReadPosRankSum
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Non-Finnish)
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allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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East Asian
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Other
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allele frequency: 0.0e0
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African
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allele frequency: 1.101079057476327e-4
allele num: 9082
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
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South Asian
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ClippingRankSum
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ReadPosRankSum
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VQSLOD
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InbreedingCoeff
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FS
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MQRankSum
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DP
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QD
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MQ
type: SiteQuality
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BaseQRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
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allele frequency: 0.0e0
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Other
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allele frequency: 0.0e0
allele num: 900
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East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8652
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European (Non-Finnish)
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allele frequency: 1.543733983759918e-5
allele num: 64778
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
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allele frequency: 0.0e0
allele num: 11574
num of homozygotes: 0

MQ
type: SiteQuality
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MQRankSum
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ClippingRankSum
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InbreedingCoeff
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DP
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BaseQRankSum
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ReadPosRankSum
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FS
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VQSLOD
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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allele frequency: 0.0e0
allele num: 11566
num of homozygotes: 0

Other
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allele frequency: 0.0e0
allele num: 900
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European (Non-Finnish)
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allele frequency: 1.238313417125875e-4
allele num: 64604
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East Asian
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allele frequency: 0.0e0
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
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allele frequency: 3.34001336005344e-4
allele num: 8982
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South Asian
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allele frequency: 6.06060606060606e-5
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ClippingRankSum
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ReadPosRankSum
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MQRankSum
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FS
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VQSLOD
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BaseQRankSum
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MQ
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QD
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele frequency: 0.0e0
allele num: 8976
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European (Finnish)
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allele frequency: 0.0e0
allele num: 6614
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South Asian
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allele frequency: 0.0e0
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European (Non-Finnish)
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allele frequency: 0.0e0
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Latino
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allele frequency: 0.0e0
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num of homozygotes: 0

East Asian
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allele frequency: 1.156871818602499e-4
allele num: 8644
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Other
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ReadPosRankSum
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BaseQRankSum
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VQSLOD
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InbreedingCoeff
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QD
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DP
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MQRankSum
type: SiteQuality
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MQ
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FS
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ClippingRankSum
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SIO_000300: -2.785e0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

Latino
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allele frequency: 8.641548565502938e-5
allele num: 11572
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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African
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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num of homozygotes: 0

MQ
type: SiteQuality
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BaseQRankSum
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VQSLOD
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MQRankSum
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DP
type: SiteQuality
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InbreedingCoeff
type: SiteQuality
SIO_000300: -2.1e-3

FS
type: SiteQuality
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QD
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SIO_000300: 1.284e1

ClippingRankSum
type: SiteQuality
SIO_000300: -8.46e-1

ReadPosRankSum
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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African
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allele count: 0
allele frequency: 0.0e0
allele num: 8968
num of homozygotes: 0

East Asian
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allele count: 0
allele frequency: 0.0e0
allele num: 8644
num of homozygotes: 0

Latino
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allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

South Asian
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allele frequency: 6.059871530723549e-5
allele num: 16502
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Other
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64614
num of homozygotes: 0

European (Finnish)
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allele frequency: 0.0e0
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BaseQRankSum
type: SiteQuality
SIO_000300: -5.428e0

DP
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SIO_000300: 2.502497e6

FS
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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VQSLOD
type: SiteQuality
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InbreedingCoeff
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MQRankSum
type: SiteQuality
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ReadPosRankSum
type: SiteQuality
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QD
type: SiteQuality
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MQ
type: SiteQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Other
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allele count: 0
allele frequency: 0.0e0
allele num: 898
num of homozygotes: 0

East Asian
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allele frequency: 0.0e0
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South Asian
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allele frequency: 0.0e0
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Latino
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allele count: 0
allele frequency: 0.0e0
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African
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allele count: 1
allele frequency: 1.114081996434938e-4
allele num: 8976
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European (Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 6614
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
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ClippingRankSum
type: SiteQuality
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DP
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MQ
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FS
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MQRankSum
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InbreedingCoeff
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BaseQRankSum
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VQSLOD
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QD
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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European (Finnish)
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allele frequency: 6.047777441790142e-4
allele num: 6614
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European (Non-Finnish)
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African
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Other
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Latino
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South Asian
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BaseQRankSum
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VQSLOD
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InbreedingCoeff
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ClippingRankSum
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MQRankSum
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FS
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DP
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ReadPosRankSum
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QD
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MQ
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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East Asian
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European (Finnish)
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European (Non-Finnish)
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allele num: 64484
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Other
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African
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South Asian
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InbreedingCoeff
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VQSLOD
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ClippingRankSum
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MQRankSum
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QD
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FS
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MQ
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BaseQRankSum
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ReadPosRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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East Asian
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South Asian
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Latino
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European (Non-Finnish)
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African
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European (Finnish)
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allele num: 6604
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Other
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MQRankSum
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InbreedingCoeff
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ClippingRankSum
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VQSLOD
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FS
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QD
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MQ
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ReadPosRankSum
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BaseQRankSum
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DP
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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South Asian
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European (Finnish)
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East Asian
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European (Non-Finnish)
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Other
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African
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Latino
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BaseQRankSum
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VQSLOD
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QD
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ClippingRankSum
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MQ
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MQRankSum
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DP
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ReadPosRankSum
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InbreedingCoeff
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FS
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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Latino
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European (Finnish)
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African
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East Asian
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South Asian
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European (Non-Finnish)
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allele count: 0
allele frequency: 0.0e0
allele num: 64548
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 896
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.409999999999999e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.499141e6

VQSLOD
type: SiteQuality
SIO_000300: 3.7e0

MQRankSum
type: SiteQuality
SIO_000300: 5.0e-3

InbreedingCoeff
type: SiteQuality
SIO_000300: 3.0e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.8e-2

MQ
type: SiteQuality
SIO_000300: 5.876e1

QD
type: SiteQuality
SIO_000300: 1.134e1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.03e0

GenotypeQuality
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bin: 5.25e1
variant carriers: 0

GenotypeQuality
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bin: 5.75e1
variant carriers: 0

GenotypeQuality
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bin: 3.75e1
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GenotypeQuality
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GenotypeQuality
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bin: 7.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16496
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

African
type: Population
allele count: 3
allele frequency: 3.352704514975414e-4
allele num: 8948
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64520
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 8.35e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 5.37e0

DP
type: SiteQuality
SIO_000300: 2.496976e6

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.28e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.884e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.3e-3

MQ
type: SiteQuality
SIO_000300: 5.676e1

QD
type: SiteQuality
SIO_000300: 1.442e1

MQRankSum
type: SiteQuality
SIO_000300: 1.97e0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.36e-1

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.75e1
variant carriers: 2

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 3.102506825515016e-5
allele num: 64464
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8938
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 894
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11568
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8642
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16490
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: 2.42e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.024e0

BaseQRankSum
type: SiteQuality
SIO_000300: -8.89e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

DP
type: SiteQuality
SIO_000300: 2.495017e6

MQ
type: SiteQuality
SIO_000300: 5.708e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.1e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.4e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.99e-1

QD
type: SiteQuality
SIO_000300: 1.386e1

GenotypeQuality
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bin: 2.25e1
variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.553132668592551e-5
allele num: 64386
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8640
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16448
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8920
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -9.772999999999999e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.55e-1

QD
type: SiteQuality
SIO_000300: 1.316e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.2e-3

DP
type: SiteQuality
SIO_000300: 2.489839e6

ClippingRankSum
type: SiteQuality
SIO_000300: -5.25e-1

MQ
type: SiteQuality
SIO_000300: 5.308e1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.077e0

MQRankSum
type: SiteQuality
SIO_000300: 3.35e-1

GenotypeQuality
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bin: 6.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8636
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.55337392817199e-5
allele num: 64376
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8914
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16440
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 2.489728e6

BaseQRankSum
type: SiteQuality
SIO_000300: 2.02e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.649999999999999e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.293e0

VQSLOD
type: SiteQuality
SIO_000300: -1.535e0

QD
type: SiteQuality
SIO_000300: 1.408e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.7e-3

FS
type: SiteQuality
SIO_000300: 0.0e0

MQ
type: SiteQuality
SIO_000300: 4.697e1

ClippingRankSum
type: SiteQuality
SIO_000300: -2.73e-1

GenotypeQuality
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bin: 8.25e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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bin: 9.25e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 16434
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 892
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.157407407407407e-4
allele num: 8640
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 64362
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 11570
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 8910
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6614
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 1.144e0

VQSLOD
type: SiteQuality
SIO_000300: -1.151e0

MQRankSum
type: SiteQuality
SIO_000300: 1.1e0

BaseQRankSum
type: SiteQuality
SIO_000300: 6.67e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.39e0

QD
type: SiteQuality
SIO_000300: 1.47e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.8e-3

MQ
type: SiteQuality
SIO_000300: 5.377e1

DP
type: SiteQuality
SIO_000300: 2.48978e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.13e0

GenotypeQuality
all individuals: 447
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variant carriers: 0

GenotypeQuality
all individuals: 586
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GenotypeQuality
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GenotypeQuality
all individuals: 2503
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variant carriers: 0

GenotypeQuality
all individuals: 3585
bin: 2.75e1
variant carriers: 0

African
type: Population
allele count: 1
allele frequency: 1.77683013503909e-4
allele num: 5628
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4192
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12626
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 40342
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4534
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9064
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 664
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 2.07e0

DP
type: SiteQuality
SIO_000300: 1.312421e6

MQ
type: SiteQuality
SIO_000300: 3.887e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.08e0

MQRankSum
type: SiteQuality
SIO_000300: -6.73e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -8.6e-3

ClippingRankSum
type: SiteQuality
SIO_000300: 1.08e0

VQSLOD
type: SiteQuality
SIO_000300: -2.984e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.45e0

FS
type: SiteQuality
SIO_000300: 0.0e0

GenotypeQuality
all individuals: 7405
bin: 9.75e1
variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 3983
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GenotypeQuality
all individuals: 454
bin: 8.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 664
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4548
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 40368
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4190
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5640
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9072
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12620
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -1.734e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.78e-1

FS
type: SiteQuality
SIO_000300: 4.1708e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.58e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.299999999999999e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -6.0e-2

MQ
type: SiteQuality
SIO_000300: 3.241e1

DP
type: SiteQuality
SIO_000300: 1.314885e6

VQSLOD
type: SiteQuality
SIO_000300: -4.146e0

QD
type: SiteQuality
SIO_000300: 2.3e-1

GenotypeQuality
all individuals: 675
bin: 8.25e1
variant carriers: 4

GenotypeQuality
all individuals: 2511
bin: 4.25e1
variant carriers: 8

GenotypeQuality
all individuals: 653
bin: 7.25e1
variant carriers: 3

GenotypeQuality
all individuals: 454
bin: 8.75e1
variant carriers: 4

European (Finnish)
type: Population
allele count: 3
allele frequency: 7.159904534606205e-4
allele num: 4190
num of homozygotes: 0

Latino
type: Population
allele count: 10
allele frequency: 1.102292768959436e-3
allele num: 9072
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.506024096385542e-3
allele num: 664
num of homozygotes: 0

African
type: Population
allele count: 4
allele frequency: 7.092198581560284e-4
allele num: 5640
num of homozygotes: 0

East Asian
type: Population
allele count: 7
allele frequency: 1.539138082673703e-3
allele num: 4548
num of homozygotes: 0

South Asian
type: Population
allele count: 2
allele frequency: 1.584786053882726e-4
allele num: 12620
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 31
allele frequency: 7.679349980182322e-4
allele num: 40368
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.78e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 9.299999999999999e-3

FS
type: SiteQuality
SIO_000300: 4.1708e1

MQRankSum
type: SiteQuality
SIO_000300: -1.734e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.58e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.0e-2

VQSLOD
type: SiteQuality
SIO_000300: -4.146e0

QD
type: SiteQuality
SIO_000300: 2.3e-1

DP
type: SiteQuality
SIO_000300: 1.314885e6

MQ
type: SiteQuality
SIO_000300: 3.241e1

GenotypeQuality
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bin: 7.25e1
variant carriers: 47

GenotypeQuality
all individuals: 299
bin: 9.25e1
variant carriers: 17

GenotypeQuality
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GenotypeQuality
all individuals: 2878
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variant carriers: 43

GenotypeQuality
all individuals: 1406
bin: 6.25e1
variant carriers: 57

Latino
type: Population
allele count: 58
allele frequency: 1.237201365187713e-2
allele num: 4688
num of homozygotes: 0

South Asian
type: Population
allele count: 58
allele frequency: 7.499353504008275e-3
allele num: 7734
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 345
allele frequency: 1.507867132867133e-2
allele num: 22880
num of homozygotes: 0

Other
type: Population
allele count: 4
allele frequency: 9.09090909090909e-3
allele num: 440
num of homozygotes: 0

African
type: Population
allele count: 35
allele frequency: 9.105098855359001e-3
allele num: 3844
num of homozygotes: 0

East Asian
type: Population
allele count: 51
allele frequency: 2.076547231270358e-2
allele num: 2456
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 27
allele frequency: 1.196808510638298e-2
allele num: 2256
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.07e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.045e-1

VQSLOD
type: SiteQuality
SIO_000300: -1.375e0

FS
type: SiteQuality
SIO_000300: 3.435e0

DP
type: SiteQuality
SIO_000300: 1.350288e6

ClippingRankSum
type: SiteQuality
SIO_000300: -1.519e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -7.44e-1

MQ
type: SiteQuality
SIO_000300: 3.572e1

MQRankSum
type: SiteQuality
SIO_000300: 6.7e-2

QD
type: SiteQuality
SIO_000300: 2.23e0

GenotypeQuality
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bin: 9.75e1
variant carriers: 17193

GenotypeQuality
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variant carriers: 633

GenotypeQuality
all individuals: 1682
bin: 1.75e1
variant carriers: 303

GenotypeQuality
all individuals: 848
bin: 6.25e1
variant carriers: 724

GenotypeQuality
all individuals: 807
bin: 9.25e1
variant carriers: 753

East Asian
type: Population
allele count: 1314
allele frequency: 4.168781725888325e-1
allele num: 3152
num of homozygotes: 0

South Asian
type: Population
allele count: 4939
allele frequency: 4.760023130300694e-1
allele num: 10376
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1342
allele frequency: 4.47631754503002e-1
allele num: 2998
num of homozygotes: 0

African
type: Population
allele count: 1117
allele frequency: 2.893782383419689e-1
allele num: 3860
num of homozygotes: 0

Latino
type: Population
allele count: 2756
allele frequency: 4.553866490416391e-1
allele num: 6052
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 12303
allele frequency: 4.368032379464603e-1
allele num: 28166
num of homozygotes: 0

Other
type: Population
allele count: 221
allele frequency: 4.491869918699187e-1
allele num: 492
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 6.055e1

MQRankSum
type: SiteQuality
SIO_000300: -5.24e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.18e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -2.181e0

MQ
type: SiteQuality
SIO_000300: 3.488e1

FS
type: SiteQuality
SIO_000300: 8.75e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.548e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 8.0e-1

QD
type: SiteQuality
SIO_000300: 5.29e0

DP
type: SiteQuality
SIO_000300: 1.423018e6

GenotypeQuality
all individuals: 5472
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 335
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GenotypeQuality
all individuals: 605
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variant carriers: 0

GenotypeQuality
all individuals: 599
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 842
bin: 7.75e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 696
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4600
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5202
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.272417397627596e-5
allele num: 44006
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.044713748432929e-4
allele num: 9572
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
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num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5882
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.9e-3

MQRankSum
type: SiteQuality
SIO_000300: -2.602e0

QD
type: SiteQuality
SIO_000300: 4.55e0

FS
type: SiteQuality
SIO_000300: 2.262e0

DP
type: SiteQuality
SIO_000300: 1.423371e6

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.115e0

MQ
type: SiteQuality
SIO_000300: 3.33e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.221e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.36e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.333e0

GenotypeQuality
all individuals: 5450
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 598
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3966
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 399
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 592
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 43870
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4594
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5868
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.662835249042145e-5
allele num: 13050
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9540
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 692
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.929012345679012e-4
allele num: 5184
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 2.967e1

ClippingRankSum
type: SiteQuality
SIO_000300: -4.03e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.15e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.34e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.569e0

MQRankSum
type: SiteQuality
SIO_000300: -3.06e-1

DP
type: SiteQuality
SIO_000300: 1.424323e6

FS
type: SiteQuality
SIO_000300: 5.014e0

QD
type: SiteQuality
SIO_000300: 1.49e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.27e-1

GenotypeQuality
all individuals: 5424
bin: 3.75e1
variant carriers: 1

GenotypeQuality
all individuals: 334
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 595
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 832
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 588
bin: 7.25e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4588
num of homozygotes: 0

Other
type: Population
allele count: 1
allele frequency: 1.457725947521866e-3
allele num: 686
num of homozygotes: 0

African
type: Population
allele count: 6
allele frequency: 1.052631578947368e-3
allele num: 5700
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.661661048115231e-5
allele num: 13052
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.934235976789168e-4
allele num: 5170
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.047559187094071e-4
allele num: 9546
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.280605728881591e-5
allele num: 43848
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -3.699e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.55e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.58e-1

QD
type: SiteQuality
SIO_000300: 1.16e0

ClippingRankSum
type: SiteQuality
SIO_000300: -7.52e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.11e-2

FS
type: SiteQuality
SIO_000300: 8.276999999999999e0

DP
type: SiteQuality
SIO_000300: 1.425347e6

MQ
type: SiteQuality
SIO_000300: 3.475e1

MQRankSum
type: SiteQuality
SIO_000300: -8.0e-2

GenotypeQuality
all individuals: 498
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1375
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4047
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 565
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5240
bin: 3.75e1
variant carriers: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5050
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9176
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4580
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 664
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 2.050020500205002e-4
allele num: 4878
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.307230861520004e-5
allele num: 43342
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12588
num of homozygotes: 0

MQRankSum
type: SiteQuality
SIO_000300: -4.89e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.155e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.91e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 8.95e-1

QD
type: SiteQuality
SIO_000300: 1.87e0

FS
type: SiteQuality
SIO_000300: 6.499e0

DP
type: SiteQuality
SIO_000300: 1.428769e6

ClippingRankSum
type: SiteQuality
SIO_000300: 1.45e0

MQ
type: SiteQuality
SIO_000300: 3.414e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.73e-1

GenotypeQuality
all individuals: 1726
bin: 2.5e0
variant carriers: 7

GenotypeQuality
all individuals: 343
bin: 5.75e1
variant carriers: 17

GenotypeQuality
all individuals: 565
bin: 8.25e1
variant carriers: 14

GenotypeQuality
all individuals: 344
bin: 8.75e1
variant carriers: 25

GenotypeQuality
all individuals: 792
bin: 7.75e1
variant carriers: 20

European (Finnish)
type: Population
allele count: 2
allele frequency: 4.366812227074236e-4
allele num: 4580
num of homozygotes: 0

Other
type: Population
allele count: 4
allele frequency: 6.024096385542169e-3
allele num: 664
num of homozygotes: 0

African
type: Population
allele count: 151
allele frequency: 2.99009900990099e-2
allele num: 5050
num of homozygotes: 0

South Asian
type: Population
allele count: 142
allele frequency: 1.128058468382587e-2
allele num: 12588
num of homozygotes: 0

Latino
type: Population
allele count: 37
allele frequency: 4.032258064516129e-3
allele num: 9176
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 54
allele frequency: 1.245904665220802e-3
allele num: 43342
num of homozygotes: 0

East Asian
type: Population
allele count: 20
allele frequency: 4.100041000410004e-3
allele num: 4878
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.73e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.89e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.155e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 1.45e0

FS
type: SiteQuality
SIO_000300: 6.499e0

DP
type: SiteQuality
SIO_000300: 1.428769e6

QD
type: SiteQuality
SIO_000300: 1.87e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.91e-2

BaseQRankSum
type: SiteQuality
SIO_000300: 8.95e-1

MQ
type: SiteQuality
SIO_000300: 3.414e1

GenotypeQuality
all individuals: 4047
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 565
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8201
bin: 9.75e1
variant carriers: 2

GenotypeQuality
all individuals: 1375
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5240
bin: 3.75e1
variant carriers: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12588
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5050
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.307230861520004e-5
allele num: 43342
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 2.050020500205002e-4
allele num: 4878
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9176
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4580
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 664
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 2.91e-2

QD
type: SiteQuality
SIO_000300: 1.87e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.45e0

FS
type: SiteQuality
SIO_000300: 6.499e0

MQ
type: SiteQuality
SIO_000300: 3.414e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.73e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 8.95e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.155e-1

DP
type: SiteQuality
SIO_000300: 1.428769e6

MQRankSum
type: SiteQuality
SIO_000300: -4.89e-1

GenotypeQuality
all individuals: 327
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 481
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 787
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 5251
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 10146
bin: 2.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4594
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.300860521835166e-5
allele num: 43462
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4886
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 668
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9166
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 2.065262288310616e-4
allele num: 4842
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 12452
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.41e-2

MQRankSum
type: SiteQuality
SIO_000300: -4.34e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.33e-1

MQ
type: SiteQuality
SIO_000300: 3.212e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -2.74e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.422e0

FS
type: SiteQuality
SIO_000300: 2.397e0

DP
type: SiteQuality
SIO_000300: 1.430853e6

QD
type: SiteQuality
SIO_000300: 1.15e0

VQSLOD
type: SiteQuality
SIO_000300: -4.419e0

GenotypeQuality
all individuals: 2177
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 394
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 4751
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 873
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 631
bin: 7.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5268
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.268499614355065e-5
allele num: 44082
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 694
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13102
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5926
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4616
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9616
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 4.814e0

MQ
type: SiteQuality
SIO_000300: 3.323e1

MQRankSum
type: SiteQuality
SIO_000300: -7.44e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.988e0

QD
type: SiteQuality
SIO_000300: 2.03e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.3e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -5.98e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.08e-2

BaseQRankSum
type: SiteQuality
SIO_000300: -6.7e-1

DP
type: SiteQuality
SIO_000300: 1.433212e6

GenotypeQuality
all individuals: 394
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 518
bin: 9.25e1
variant carriers: 1

GenotypeQuality
all individuals: 8314
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 349
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 629
bin: 8.25e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4616
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5268
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.687478906513669e-4
allele num: 5926
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.039933444259567e-4
allele num: 9616
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13102
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.268499614355065e-5
allele num: 44082
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 694
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -3.988e0

MQ
type: SiteQuality
SIO_000300: 3.323e1

ClippingRankSum
type: SiteQuality
SIO_000300: -5.98e-1

FS
type: SiteQuality
SIO_000300: 4.814e0

DP
type: SiteQuality
SIO_000300: 1.433212e6

MQRankSum
type: SiteQuality
SIO_000300: -7.44e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -6.7e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 1.08e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.3e-2

QD
type: SiteQuality
SIO_000300: 2.03e0

GenotypeQuality
all individuals: 1643
bin: 1.25e1
variant carriers: 1

GenotypeQuality
all individuals: 1973
bin: 1.75e1
variant carriers: 3

GenotypeQuality
all individuals: 1524
bin: 6.75e1
variant carriers: 1

GenotypeQuality
all individuals: 8329
bin: 9.75e1
variant carriers: 55

GenotypeQuality
all individuals: 520
bin: 9.25e1
variant carriers: 4

Latino
type: Population
allele count: 6
allele frequency: 6.269592476489029e-4
allele num: 9570
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13056
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4624
num of homozygotes: 0

African
type: Population
allele count: 60
allele frequency: 1.052631578947368e-2
allele num: 5700
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 6.805498843065197e-5
allele num: 44082
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 692
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5226
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 3.541e1

VQSLOD
type: SiteQuality
SIO_000300: -3.731e0

ClippingRankSum
type: SiteQuality
SIO_000300: 1.89e-1

FS
type: SiteQuality
SIO_000300: 2.46e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.6e-3

QD
type: SiteQuality
SIO_000300: 4.71e0

MQRankSum
type: SiteQuality
SIO_000300: 7.27e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.78e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 1.91e0

DP
type: SiteQuality
SIO_000300: 1.435561e6

GenotypeQuality
all individuals: 8290
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 518
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3076
bin: 4.75e1
variant carriers: 1

GenotypeQuality
all individuals: 345
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5407
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9580
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.267265224685984e-5
allele num: 44106
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4622
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5234
num of homozygotes: 0

South Asian
type: Population
allele count: 4
allele frequency: 3.066073892380807e-4
allele num: 13046
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5782
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 692
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 3.336e1

DP
type: SiteQuality
SIO_000300: 1.437204e6

ClippingRankSum
type: SiteQuality
SIO_000300: 9.9e-2

InbreedingCoeff
type: SiteQuality
SIO_000300: -6.3e-3

VQSLOD
type: SiteQuality
SIO_000300: -4.088e0

QD
type: SiteQuality
SIO_000300: 6.7e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.73e-1

MQRankSum
type: SiteQuality
SIO_000300: -1.94e-1

FS
type: SiteQuality
SIO_000300: 6.2e0

BaseQRankSum
type: SiteQuality
SIO_000300: 2.34e0

GenotypeQuality
all individuals: 523
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5314
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1331
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2000
bin: 1.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1558
bin: 6.75e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 1.039068994181214e-4
allele num: 9624
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13140
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4632
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 44210
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 694
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5976
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5292
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.76e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -3.2e-1

QD
type: SiteQuality
SIO_000300: 4.98e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -9.76e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.36e0

MQ
type: SiteQuality
SIO_000300: 3.545e1

MQRankSum
type: SiteQuality
SIO_000300: -8.35e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.6e-3

DP
type: SiteQuality
SIO_000300: 1.438595e6

GenotypeQuality
all individuals: 634
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 234
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1180
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5369
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2114
bin: 4.25e1
variant carriers: 3

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 694
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.630093087135663e-5
allele num: 13106
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5256
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5824
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 2
allele frequency: 4.530421782267929e-5
allele num: 44146
num of homozygotes: 0

Latino
type: Population
allele count: 1
allele frequency: 1.041883725776203e-4
allele num: 9598
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 2.158894645941278e-4
allele num: 4632
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.39e-1

MQ
type: SiteQuality
SIO_000300: 3.373e1

BaseQRankSum
type: SiteQuality
SIO_000300: 6.7e-2

QD
type: SiteQuality
SIO_000300: 6.6e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.075e0

DP
type: SiteQuality
SIO_000300: 1.44138e6

FS
type: SiteQuality
SIO_000300: 1.652e0

VQSLOD
type: SiteQuality
SIO_000300: -4.44e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.7e-3

MQRankSum
type: SiteQuality
SIO_000300: -1.369e0

GenotypeQuality
all individuals: 10838
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 641
bin: 8.25e1
variant carriers: 1

GenotypeQuality
all individuals: 8313
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5396
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2103
bin: 4.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5308
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 6.780886940011753e-5
allele num: 44242
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4634
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 694
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5954
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 9616
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.608034083992696e-5
allele num: 13144
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -4.56e-1

MQ
type: SiteQuality
SIO_000300: 3.203e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.56e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.534e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.267e0

QD
type: SiteQuality
SIO_000300: 1.14e0

MQRankSum
type: SiteQuality
SIO_000300: -1.416e0

FS
type: SiteQuality
SIO_000300: 7.751e0

DP
type: SiteQuality
SIO_000300: 1.443369e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.6e-3

GenotypeQuality
all individuals: 850
bin: 4.25e1
variant carriers: 343

GenotypeQuality
all individuals: 732
bin: 7.25e1
variant carriers: 609

GenotypeQuality
all individuals: 790
bin: 8.75e1
variant carriers: 719

GenotypeQuality
all individuals: 1130
bin: 7.75e1
variant carriers: 988

GenotypeQuality
all individuals: 1485
bin: 6.25e1
variant carriers: 743

European (Finnish)
type: Population
allele count: 1377
allele frequency: 3.799668874172186e-1
allele num: 3624
num of homozygotes: 0

East Asian
type: Population
allele count: 1488
allele frequency: 3.609898107714702e-1
allele num: 4122
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 12358
allele frequency: 3.561999192944025e-1
allele num: 34694
num of homozygotes: 0

African
type: Population
allele count: 1783
allele frequency: 3.793617021276596e-1
allele num: 4700
num of homozygotes: 0

Other
type: Population
allele count: 198
allele frequency: 3.6e-1
allele num: 550
num of homozygotes: 0

South Asian
type: Population
allele count: 3569
allele frequency: 3.372071050642479e-1
allele num: 10584
num of homozygotes: 0

Latino
type: Population
allele count: 2702
allele frequency: 3.601706211676886e-1
allele num: 7502
num of homozygotes: 0

DP
type: SiteQuality
SIO_000300: 1.594996e6

MQ
type: SiteQuality
SIO_000300: 3.345e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.939e-1

VQSLOD
type: SiteQuality
SIO_000300: 4.333e1

FS
type: SiteQuality
SIO_000300: 1.5064e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 3.26e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.321e0

BaseQRankSum
type: SiteQuality
SIO_000300: -9.25e-1

QD
type: SiteQuality
SIO_000300: 4.81e0

MQRankSum
type: SiteQuality
SIO_000300: -1.202e0

GenotypeQuality
all individuals: 4987
bin: 3.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9512
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2198
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 3543
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 848
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.210824195259993e-5
allele num: 45232
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 4878
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13288
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5638
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 698
num of homozygotes: 0

Latino
type: Population
allele count: 3
allele frequency: 3.05935141749949e-4
allele num: 9806
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.751313485113835e-4
allele num: 5710
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.114e0

DP
type: SiteQuality
SIO_000300: 1.603838e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.245e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.64e-2

VQSLOD
type: SiteQuality
SIO_000300: -3.953e0

FS
type: SiteQuality
SIO_000300: 3.715e0

MQRankSum
type: SiteQuality
SIO_000300: -7.91e-1

QD
type: SiteQuality
SIO_000300: 3.1e0

MQ
type: SiteQuality
SIO_000300: 3.304e1

GenotypeQuality
all individuals: 1156
bin: 7.75e1
variant carriers: 159

GenotypeQuality
all individuals: 466
bin: 8.75e1
variant carriers: 139

GenotypeQuality
all individuals: 633
bin: 9.25e1
variant carriers: 154

GenotypeQuality
all individuals: 2198
bin: 4.25e1
variant carriers: 87

GenotypeQuality
all individuals: 9512
bin: 9.75e1
variant carriers: 1607

Other
type: Population
allele count: 19
allele frequency: 2.722063037249284e-2
allele num: 698
num of homozygotes: 0

East Asian
type: Population
allele count: 193
allele frequency: 3.380035026269702e-2
allele num: 5710
num of homozygotes: 0

African
type: Population
allele count: 497
allele frequency: 8.815182688896772e-2
allele num: 5638
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 160
allele frequency: 3.280032800328003e-2
allele num: 4878
num of homozygotes: 0

Latino
type: Population
allele count: 196
allele frequency: 1.998776259433e-2
allele num: 9806
num of homozygotes: 0

South Asian
type: Population
allele count: 338
allele frequency: 2.543648404575557e-2
allele num: 13288
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1669
allele frequency: 3.689865581888929e-2
allele num: 45232
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.64e-2

MQRankSum
type: SiteQuality
SIO_000300: -7.91e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.0e0

DP
type: SiteQuality
SIO_000300: 1.603838e6

BaseQRankSum
type: SiteQuality
SIO_000300: -1.245e0

QD
type: SiteQuality
SIO_000300: 3.1e0

VQSLOD
type: SiteQuality
SIO_000300: -3.953e0

MQ
type: SiteQuality
SIO_000300: 3.304e1

ClippingRankSum
type: SiteQuality
SIO_000300: -1.114e0

FS
type: SiteQuality
SIO_000300: 3.715e0

GenotypeQuality
all individuals: 881
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 387
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9292
bin: 9.75e1
variant carriers: 0

GenotypeQuality
all individuals: 594
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 5574
bin: 3.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5182
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6186
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6442
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 13806
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 736
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 2.052460900619843e-5
allele num: 48722
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10186
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -4.098e0

MQRankSum
type: SiteQuality
SIO_000300: -1.335e0

QD
type: SiteQuality
SIO_000300: 6.3e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.47e-1

MQ
type: SiteQuality
SIO_000300: 3.179e1

FS
type: SiteQuality
SIO_000300: 0.0e0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.0e-1

DP
type: SiteQuality
SIO_000300: 1.607685e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.6e-3

ReadPosRankSum
type: SiteQuality
SIO_000300: 4.92e-1

GenotypeQuality
all individuals: 3857
bin: 2.25e1
variant carriers: 222

GenotypeQuality
all individuals: 1143
bin: 9.25e1
variant carriers: 1056

GenotypeQuality
all individuals: 717
bin: 7.25e1
variant carriers: 612

GenotypeQuality
all individuals: 791
bin: 8.75e1
variant carriers: 721

GenotypeQuality
all individuals: 1643
bin: 6.25e1
variant carriers: 754

African
type: Population
allele count: 1831
allele frequency: 3.905716723549488e-1
allele num: 4688
num of homozygotes: 0

South Asian
type: Population
allele count: 3632
allele frequency: 3.472939376553834e-1
allele num: 10458
num of homozygotes: 0

East Asian
type: Population
allele count: 1555
allele frequency: 3.858560794044665e-1
allele num: 4030
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1414
allele frequency: 3.934335002782415e-1
allele num: 3594
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 12679
allele frequency: 3.754738213693438e-1
allele num: 33768
num of homozygotes: 0

Other
type: Population
allele count: 202
allele frequency: 3.726937269372694e-1
allele num: 542
num of homozygotes: 0

Latino
type: Population
allele count: 2751
allele frequency: 3.806032097399004e-1
allele num: 7228
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.23e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.194e0

MQ
type: SiteQuality
SIO_000300: 3.264e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.151e-1

DP
type: SiteQuality
SIO_000300: 1.703781e6

QD
type: SiteQuality
SIO_000300: 4.5e0

VQSLOD
type: SiteQuality
SIO_000300: 4.809e1

MQRankSum
type: SiteQuality
SIO_000300: -1.432e0

FS
type: SiteQuality
SIO_000300: 1.93e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.09e-1

GenotypeQuality
all individuals: 1733
bin: 1.75e1
variant carriers: 1

GenotypeQuality
all individuals: 1973
bin: 4.25e1
variant carriers: 1

GenotypeQuality
all individuals: 2132
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 529
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GenotypeQuality
all individuals: 9239
bin: 9.75e1
variant carriers: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5336
num of homozygotes: 0

African
type: Population
allele count: 6
allele frequency: 9.137983551629607e-4
allele num: 6566
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10388
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 50082
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 758
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6558
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14040
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 4.2e-1

DP
type: SiteQuality
SIO_000300: 1.677353e6

MQRankSum
type: SiteQuality
SIO_000300: -4.36e-1

MQ
type: SiteQuality
SIO_000300: 3.216e1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.64e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.3e-3

FS
type: SiteQuality
SIO_000300: 9.409999999999999e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.134e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.49e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.51e-1

GenotypeQuality
all individuals: 529
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1084
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variant carriers: 0

GenotypeQuality
all individuals: 802
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variant carriers: 0

GenotypeQuality
all individuals: 1097
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variant carriers: 0

GenotypeQuality
all individuals: 1973
bin: 4.25e1
variant carriers: 2

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 758
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.522997258604935e-4
allele num: 6566
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6558
num of homozygotes: 0

South Asian
type: Population
allele count: 6
allele frequency: 4.273504273504274e-4
allele num: 14040
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5336
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 5.990176111177669e-5
allele num: 50082
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10388
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: 8.3e-3

DP
type: SiteQuality
SIO_000300: 1.677353e6

MQ
type: SiteQuality
SIO_000300: 3.216e1

VQSLOD
type: SiteQuality
SIO_000300: -4.134e0

FS
type: SiteQuality
SIO_000300: 9.409999999999999e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 3.64e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.49e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.51e-1

MQRankSum
type: SiteQuality
SIO_000300: -4.36e-1

QD
type: SiteQuality
SIO_000300: 4.2e-1

GenotypeQuality
all individuals: 1578
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variant carriers: 0

GenotypeQuality
all individuals: 9393
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GenotypeQuality
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GenotypeQuality
all individuals: 2152
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GenotypeQuality
all individuals: 9266
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5344
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14096
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6578
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Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.991635132443736e-5
allele num: 50210
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6604
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Other
type: Population
allele count: 0
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allele num: 760
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -4.34e-1

BaseQRankSum
type: SiteQuality
SIO_000300: 2.67e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

MQRankSum
type: SiteQuality
SIO_000300: -2.67e-1

DP
type: SiteQuality
SIO_000300: 1.679282e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -3.4e-3

VQSLOD
type: SiteQuality
SIO_000300: -3.481e0

QD
type: SiteQuality
SIO_000300: 1.291e1

MQ
type: SiteQuality
SIO_000300: 3.369e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.330000000000001e-1

GenotypeQuality
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variant carriers: 0

GenotypeQuality
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GenotypeQuality
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GenotypeQuality
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GenotypeQuality
all individuals: 9268
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variant carriers: 1

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 50220
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6574
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.094211123723042e-5
allele num: 14096
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5338
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 758
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 3.308e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.92e-1

ClippingRankSum
type: SiteQuality
SIO_000300: 3.36e-1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 4.88e0

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.3e-3

DP
type: SiteQuality
SIO_000300: 1.680838e6

MQRankSum
type: SiteQuality
SIO_000300: 1.17e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.45e0

VQSLOD
type: SiteQuality
SIO_000300: -3.566e0

GenotypeQuality
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variant carriers: 0

GenotypeQuality
all individuals: 802
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GenotypeQuality
all individuals: 1795
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GenotypeQuality
all individuals: 3474
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GenotypeQuality
all individuals: 1093
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variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6574
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6608
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 50220
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10398
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.87336080929187e-4
allele num: 5338
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 758
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14096
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.45e0

FS
type: SiteQuality
SIO_000300: 0.0e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.92e-1

QD
type: SiteQuality
SIO_000300: 4.88e0

MQRankSum
type: SiteQuality
SIO_000300: 1.17e0

ClippingRankSum
type: SiteQuality
SIO_000300: 3.36e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 7.3e-3

VQSLOD
type: SiteQuality
SIO_000300: -3.566e0

MQ
type: SiteQuality
SIO_000300: 3.308e1

DP
type: SiteQuality
SIO_000300: 1.680838e6

GenotypeQuality
all individuals: 2616
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 745
bin: 8.25e1
variant carriers: 2

GenotypeQuality
all individuals: 1564
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2125
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 803
bin: 7.25e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 50206
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 760
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6612
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10392
num of homozygotes: 0

South Asian
type: Population
allele count: 15
allele frequency: 1.064282673478076e-3
allele num: 14094
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6576
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5342
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: -3.82e-1

MQRankSum
type: SiteQuality
SIO_000300: -6.0e-3

FS
type: SiteQuality
SIO_000300: 1.0939e1

ClippingRankSum
type: SiteQuality
SIO_000300: -7.9e-1

MQ
type: SiteQuality
SIO_000300: 3.146e1

QD
type: SiteQuality
SIO_000300: 2.55e0

VQSLOD
type: SiteQuality
SIO_000300: -5.208e0

BaseQRankSum
type: SiteQuality
SIO_000300: 3.19e0

DP
type: SiteQuality
SIO_000300: 1.683216e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.5e-3

GenotypeQuality
all individuals: 348
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 740
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1119
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1082
bin: 7.75e1
variant carriers: 1

GenotypeQuality
all individuals: 693
bin: 5.75e1
variant carriers: 1

GenotypeQuality
all individuals: 8965
bin: 6.25e1
variant carriers: 0

Latino
type: Population
allele count: 1
allele frequency: 9.609840476648087e-5
allele num: 10406
num of homozygotes: 0

South Asian
type: Population
allele count: 1
allele frequency: 7.094211123723042e-5
allele num: 14096
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6640
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6600
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5348
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 3
allele frequency: 5.959475566150179e-5
allele num: 50340
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 760
num of homozygotes: 0

MQ
type: SiteQuality
SIO_000300: 3.292e1

VQSLOD
type: SiteQuality
SIO_000300: -5.172e0

MQRankSum
type: SiteQuality
SIO_000300: 1.74e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.2e-3

ClippingRankSum
type: SiteQuality
SIO_000300: -5.82e-1

FS
type: SiteQuality
SIO_000300: 1.4678e1

QD
type: SiteQuality
SIO_000300: 2.66e0

BaseQRankSum
type: SiteQuality
SIO_000300: 1.6e0

ReadPosRankSum
type: SiteQuality
SIO_000300: -1.27e-1

DP
type: SiteQuality
SIO_000300: 1.694911e6

GenotypeQuality
all individuals: 2057
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 736
bin: 8.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2680
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2681
bin: 7.5e0
variant carriers: 1

GenotypeQuality
all individuals: 534
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9269
bin: 9.75e1
variant carriers: 4

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 50482
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5366
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 762
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6640
num of homozygotes: 0

African
type: Population
allele count: 6
allele frequency: 9.085402786190188e-4
allele num: 6604
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10404
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14122
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 1.72e0

ClippingRankSum
type: SiteQuality
SIO_000300: -5.03e-1

FS
type: SiteQuality
SIO_000300: 8.787000000000001e0

MQRankSum
type: SiteQuality
SIO_000300: -5.01e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.095e0

BaseQRankSum
type: SiteQuality
SIO_000300: -7.7e-2

DP
type: SiteQuality
SIO_000300: 1.702263e6

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.1e-3

MQ
type: SiteQuality
SIO_000300: 2.992e1

ReadPosRankSum
type: SiteQuality
SIO_000300: -5.7e-2

GenotypeQuality
all individuals: 3554
bin: 2.75e1
variant carriers: 0

GenotypeQuality
all individuals: 1563
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1097
bin: 7.75e1
variant carriers: 0

GenotypeQuality
all individuals: 352
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 425
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 537
bin: 9.25e1
variant carriers: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6638
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6666
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 764
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10408
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5362
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14128
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 50468
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: -4.736e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -4.1e-3

DP
type: SiteQuality
SIO_000300: 1.702726e6

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 3.86e0

MQRankSum
type: SiteQuality
SIO_000300: -6.7e-2

MQ
type: SiteQuality
SIO_000300: 2.893e1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.666e0

ClippingRankSum
type: SiteQuality
SIO_000300: 6.7e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: -6.7e-2

GenotypeQuality
all individuals: 6110
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 1899
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 352
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 7576
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2044
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9274
bin: 9.75e1
variant carriers: 1

European (Finnish)
type: Population
allele count: 1
allele frequency: 1.87125748502994e-4
allele num: 5344
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14106
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 764
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6602
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10396
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 50376
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6662
num of homozygotes: 0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.026e0

DP
type: SiteQuality
SIO_000300: 1.70373e6

MQ
type: SiteQuality
SIO_000300: 2.937e1

FS
type: SiteQuality
SIO_000300: 0.0e0

QD
type: SiteQuality
SIO_000300: 3.38e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.9e-3

VQSLOD
type: SiteQuality
SIO_000300: -4.771e0

ClippingRankSum
type: SiteQuality
SIO_000300: -3.82e-1

MQRankSum
type: SiteQuality
SIO_000300: 8.67e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 1.89e-1

GenotypeQuality
all individuals: 9275
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 495
bin: 5.75e1
variant carriers: 0

GenotypeQuality
all individuals: 2082
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 7444
bin: 6.25e1
variant carriers: 0

GenotypeQuality
all individuals: 542
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2177
bin: 5.25e1
variant carriers: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 766
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5336
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10400
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6672
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14142
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 6658
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 50396
num of homozygotes: 0

ReadPosRankSum
type: SiteQuality
SIO_000300: 9.22e-1

VQSLOD
type: SiteQuality
SIO_000300: -4.238e0

MQ
type: SiteQuality
SIO_000300: 3.096e1

MQRankSum
type: SiteQuality
SIO_000300: 3.33e-1

FS
type: SiteQuality
SIO_000300: 2.634e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.7e-3

QD
type: SiteQuality
SIO_000300: 2.01e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.12e0

ClippingRankSum
type: SiteQuality
SIO_000300: -2.72e-1

DP
type: SiteQuality
SIO_000300: 1.707173e6

GenotypeQuality
all individuals: 1184
bin: 9.25e1
variant carriers: 1131

GenotypeQuality
all individuals: 1902
bin: 2.75e1
variant carriers: 1193

GenotypeQuality
all individuals: 1534
bin: 6.75e1
variant carriers: 1431

GenotypeQuality
all individuals: 2092
bin: 3.75e1
variant carriers: 1582

GenotypeQuality
all individuals: 1410
bin: 7.25e1
variant carriers: 1330

GenotypeQuality
all individuals: 1150
bin: 8.25e1
variant carriers: 1077

East Asian
type: Population
allele count: 2572
allele frequency: 4.627563871896366e-1
allele num: 5558
num of homozygotes: 0

African
type: Population
allele count: 2578
allele frequency: 4.557991513437058e-1
allele num: 5656
num of homozygotes: 0

South Asian
type: Population
allele count: 4196
allele frequency: 3.839677891654465e-1
allele num: 10928
num of homozygotes: 0

Latino
type: Population
allele count: 3690
allele frequency: 4.509899780004889e-1
allele num: 8182
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 1822
allele frequency: 4.309366130558184e-1
allele num: 4228
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 17829
allele frequency: 4.46484022838826e-1
allele num: 39932
num of homozygotes: 0

Other
type: Population
allele count: 255
allele frequency: 4.221854304635762e-1
allele num: 604
num of homozygotes: 0

VQSLOD
type: SiteQuality
SIO_000300: 9.738e1

InbreedingCoeff
type: SiteQuality
SIO_000300: -5.763e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -4.46e-1

ClippingRankSum
type: SiteQuality
SIO_000300: -3.61e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: -4.9e-2

FS
type: SiteQuality
SIO_000300: 1.4482e1

MQ
type: SiteQuality
SIO_000300: 2.874e1

DP
type: SiteQuality
SIO_000300: 1.961677e6

MQRankSum
type: SiteQuality
SIO_000300: -1.736e0

QD
type: SiteQuality
SIO_000300: 3.56e0

GenotypeQuality
all individuals: 5441
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 425
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 9935
bin: 9.75e1
variant carriers: 1

GenotypeQuality
all individuals: 3628
bin: 5.25e1
variant carriers: 0

GenotypeQuality
all individuals: 968
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 3133
bin: 2.75e1
variant carriers: 1

Latino
type: Population
allele count: 1
allele frequency: 9.304056568663938e-5
allele num: 10748
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.401345291479821e-4
allele num: 7136
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5620
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 780
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7278
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14586
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 1
allele frequency: 1.877863742206866e-5
allele num: 53252
num of homozygotes: 0

FS
type: SiteQuality
SIO_000300: 3.424e0

InbreedingCoeff
type: SiteQuality
SIO_000300: -7.0e-4

VQSLOD
type: SiteQuality
SIO_000300: -4.837e0

QD
type: SiteQuality
SIO_000300: 4.12e0

ClippingRankSum
type: SiteQuality
SIO_000300: -1.43e-1

MQRankSum
type: SiteQuality
SIO_000300: 1.58e-1

ReadPosRankSum
type: SiteQuality
SIO_000300: 6.3e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -1.576e0

MQ
type: SiteQuality
SIO_000300: 2.811e1

DP
type: SiteQuality
SIO_000300: 1.870827e6

GenotypeQuality
all individuals: 5093
bin: 6.25e1
variant carriers: 16

GenotypeQuality
all individuals: 643
bin: 9.25e1
variant carriers: 5

GenotypeQuality
all individuals: 9413
bin: 9.75e1
variant carriers: 98

GenotypeQuality
all individuals: 822
bin: 5.75e1
variant carriers: 9

GenotypeQuality
all individuals: 3071
bin: 2.75e1
variant carriers: 23

GenotypeQuality
all individuals: 3219
bin: 5.25e1
variant carriers: 18

European (Finnish)
type: Population
allele count: 6
allele frequency: 1.099303774276292e-3
allele num: 5458
num of homozygotes: 0

Other
type: Population
allele count: 4
allele frequency: 5.291005291005291e-3
allele num: 756
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 189
allele frequency: 3.692127368626685e-3
allele num: 51190
num of homozygotes: 0

Latino
type: Population
allele count: 21
allele frequency: 2.024681835711531e-3
allele num: 10372
num of homozygotes: 0

African
type: Population
allele count: 35
allele frequency: 5.087209302325582e-3
allele num: 6880
num of homozygotes: 0

East Asian
type: Population
allele count: 25
allele frequency: 3.59401955146636e-3
allele num: 6956
num of homozygotes: 0

South Asian
type: Population
allele count: 23
allele frequency: 1.615395420705155e-3
allele num: 14238
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.43e-2

MQRankSum
type: SiteQuality
SIO_000300: -1.085e0

BaseQRankSum
type: SiteQuality
SIO_000300: -2.82e-1

FS
type: SiteQuality
SIO_000300: 9.6e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.523e0

QD
type: SiteQuality
SIO_000300: 6.4e-1

MQ
type: SiteQuality
SIO_000300: 3.584e1

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.590000000000001e-1

DP
type: SiteQuality
SIO_000300: 1.875528e6

ClippingRankSum
type: SiteQuality
SIO_000300: -5.29e-1

GenotypeQuality
all individuals: 2456
bin: 4.25e1
variant carriers: 26

GenotypeQuality
all individuals: 2046
bin: 5.25e1
variant carriers: 18

GenotypeQuality
all individuals: 963
bin: 8.25e1
variant carriers: 9

GenotypeQuality
all individuals: 7168
bin: 6.25e1
variant carriers: 16

GenotypeQuality
all individuals: 655
bin: 9.25e1
variant carriers: 5

GenotypeQuality
all individuals: 7914
bin: 2.25e1
variant carriers: 18

European (Finnish)
type: Population
allele count: 6
allele frequency: 1.092896174863388e-3
allele num: 5490
num of homozygotes: 0

African
type: Population
allele count: 35
allele frequency: 5.049047893825736e-3
allele num: 6932
num of homozygotes: 0

Latino
type: Population
allele count: 21
allele frequency: 2.008032128514056e-3
allele num: 10458
num of homozygotes: 0

South Asian
type: Population
allele count: 23
allele frequency: 1.60861658973283e-3
allele num: 14298
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 187
allele frequency: 3.62024238200333e-3
allele num: 51654
num of homozygotes: 0

East Asian
type: Population
allele count: 25
allele frequency: 3.549119818285065e-3
allele num: 7044
num of homozygotes: 0

Other
type: Population
allele count: 4
allele frequency: 5.263157894736842e-3
allele num: 760
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -1.3e-2

ClippingRankSum
type: SiteQuality
SIO_000300: -5.9e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.515e0

MQ
type: SiteQuality
SIO_000300: 3.583e1

MQRankSum
type: SiteQuality
SIO_000300: -1.056e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.6e-1

BaseQRankSum
type: SiteQuality
SIO_000300: -7.35e-1

DP
type: SiteQuality
SIO_000300: 1.885895e6

FS
type: SiteQuality
SIO_000300: 9.47e-1

QD
type: SiteQuality
SIO_000300: 6.3e-1

GenotypeQuality
all individuals: 3019
bin: 2.75e1
variant carriers: 22

GenotypeQuality
all individuals: 5005
bin: 3.75e1
variant carriers: 12

GenotypeQuality
all individuals: 1438
bin: 5.25e1
variant carriers: 18

GenotypeQuality
all individuals: 654
bin: 9.25e1
variant carriers: 5

GenotypeQuality
all individuals: 972
bin: 8.25e1
variant carriers: 9

GenotypeQuality
all individuals: 2348
bin: 4.25e1
variant carriers: 27

Other
type: Population
allele count: 4
allele frequency: 5.263157894736842e-3
allele num: 760
num of homozygotes: 0

South Asian
type: Population
allele count: 23
allele frequency: 1.604800446553168e-3
allele num: 14332
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 187
allele frequency: 3.614364683598129e-3
allele num: 51738
num of homozygotes: 0

African
type: Population
allele count: 35
allele frequency: 5.033074489502445e-3
allele num: 6954
num of homozygotes: 0

East Asian
type: Population
allele count: 25
allele frequency: 3.556187766714083e-3
allele num: 7030
num of homozygotes: 0

Latino
type: Population
allele count: 21
allele frequency: 2.000762195121951e-3
allele num: 10496
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 6
allele frequency: 1.090116279069767e-3
allele num: 5504
num of homozygotes: 0

ClippingRankSum
type: SiteQuality
SIO_000300: -6.45e-1

MQ
type: SiteQuality
SIO_000300: 3.575e1

FS
type: SiteQuality
SIO_000300: 9.370000000000001e-1

VQSLOD
type: SiteQuality
SIO_000300: -3.341e0

DP
type: SiteQuality
SIO_000300: 1.892393e6

QD
type: SiteQuality
SIO_000300: 6.3e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.3e-3

BaseQRankSum
type: SiteQuality
SIO_000300: -1.221e0

MQRankSum
type: SiteQuality
SIO_000300: -1.059e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.95e-1

GenotypeQuality
all individuals: 8268
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2348
bin: 4.25e1
variant carriers: 0

GenotypeQuality
all individuals: 467
bin: 8.75e1
variant carriers: 0

GenotypeQuality
all individuals: 3544
bin: 4.75e1
variant carriers: 0

GenotypeQuality
all individuals: 654
bin: 9.25e1
variant carriers: 0

GenotypeQuality
all individuals: 9415
bin: 9.75e1
variant carriers: 1

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10496
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5504
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 760
num of homozygotes: 0

African
type: Population
allele count: 1
allele frequency: 1.438021282714984e-4
allele num: 6954
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14332
num of homozygotes: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 51738
num of homozygotes: 0

East Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7030
num of homozygotes: 0

QD
type: SiteQuality
SIO_000300: 6.3e-1

FS
type: SiteQuality
SIO_000300: 9.370000000000001e-1

InbreedingCoeff
type: SiteQuality
SIO_000300: 4.3e-3

MQRankSum
type: SiteQuality
SIO_000300: -1.059e0

BaseQRankSum
type: SiteQuality
SIO_000300: -1.221e0

MQ
type: SiteQuality
SIO_000300: 3.575e1

VQSLOD
type: SiteQuality
SIO_000300: -3.341e0

ReadPosRankSum
type: SiteQuality
SIO_000300: 7.95e-1

DP
type: SiteQuality
SIO_000300: 1.892393e6

ClippingRankSum
type: SiteQuality
SIO_000300: -6.45e-1

GenotypeQuality
all individuals: 2317
bin: 7.5e0
variant carriers: 0

GenotypeQuality
all individuals: 1034
bin: 7.25e1
variant carriers: 0

GenotypeQuality
all individuals: 2971
bin: 6.75e1
variant carriers: 0

GenotypeQuality
all individuals: 5157
bin: 3.25e1
variant carriers: 0

GenotypeQuality
all individuals: 8855
bin: 2.25e1
variant carriers: 0

GenotypeQuality
all individuals: 473
bin: 8.75e1
variant carriers: 0

European (Non-Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 53614
num of homozygotes: 0

Other
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 786
num of homozygotes: 0

African
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 7196
num of homozygotes: 0

European (Finnish)
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 5664
num of homozygotes: 0

Latino
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 10786
num of homozygotes: 0

South Asian
type: Population
allele count: 0
allele frequency: 0.0e0
allele num: 14680
num of homozygotes: 0

East Asian
type: Population
allele count: 1
allele frequency: 1.367240907847963e-4
allele num: 7314
num of homozygotes: 0

InbreedingCoeff
type: SiteQuality
SIO_000300: -2.9e-3

QD
type: SiteQuality
SIO_000300: 2.85e0

ClippingRankSum
type: SiteQuality
SIO_000300: 2.34e-1

MQ
type: SiteQuality
SIO_000300: 2.688e1

DP
type: SiteQuality
SIO_000300: 1.910408e6

BaseQRankSum
type: SiteQuality
SIO_000300: -7.68e-1

FS
type: SiteQuality
SIO_000300: 1.987e0

MQRankSum
type: SiteQuality
SIO_000300: -5.4e-2

ReadPosRankSum
type: SiteQuality
SIO_000300: 5.679999999999999e-1

VQSLOD
type: SiteQuality
SIO_000300: -5.005e0